NO20G02060.1, NO20G02060.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G02060.1
Unique Name	NO20G02060.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4236
Alignment location	chr20:607238..611643 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:607238..611643 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G02060.1 vs.
Match: EWM22045.1 (Ankyrin repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 897.5 bits (2318), Expect = 3.200e-257
Identity = 451/822 (54.87%), Postives = 584/822 (71.05%), Query Frame = 0

Query:   16 DNETADDTLVGEAQVGEEKTVEVLLHAALDPEAGGLTWRPYPDMRGRLDNVCLLQLRCWFPPMLHDAHRHTIFRRAIQGAVHKVQRQDSRQLLLQQQQQQRGQERGGREVRALDIGTGTSLLSLEAVRAGVTHVVACEGFPALAAVAQEVVRFAGMEKQIDVLSKRSTALEKEETGSIDLVVSELLDSTLLGEGYLSTLRDLYTRGLVSPNACVVPARARVWAQLIECPELPSHFHIPTANVACAGGGRPLPLYLAPPTNGPAAGSSTAVAETGSERKRVRSDTDDATAATTGDAKTQKQGFAGGHIPCIAVSAPFSLLDIDFAAVTSETSPGADVRNGPIQMGLPLTVPVLRKGTLHGVLMWWDLIPLDKTEVYTSMPRNPSTDPLWQDHWKPCVWPLATPRAVDATQTIPVQGAHDDQTMWVEVGGDDMDQSARRLREGPSPCICGLHASLPVGRVLELNDTSRLDTYRLAMQQVLGERKDDVCTILDICDGGLVVSCLLDIRRDLGGEHPICPPSSKLVSLEQHPWYAAVLERSCRSGGGTNCSSAQNNDAADT-----QLAVWRGAGAGEGWNSAAWGEDVHVLCGDGYYAKVGPNRPVWSWLNFWLLRTALAPVLARDVVVLPFQARLMAAVVECPSLYRVHGGGRPVADDDLLGGWNHDAYRRAVEEGAARAMCDEDRDLPVSLANHPHRFLTPPALVMRLDLHHAIDWTAPRAEDGAYRRNVIHVPFEQAGCVHALALWVDVDLTYGAATGSDPSLVVSGCETRHARQTLRWLSGEKVGQGEEGGKRWGVEIKAAMDLAETPGIWTECRIMERGG 833
            D+  ADDTL+GE    +    EVLLHA+LDPEAGG+TWRPY DM GR D++CLL LRCWFPPMLHD HR+ IF+RAI  ++  ++ +         + +   +E+G +++R LDIGTGT LLSLEAVRAG T V AC+GF ALA VA EVVR AG+E+ I V+ K S+AL++EE GSIDL+V+E+LDSTLLGEGYLSTLRDLYTRGLV     VVP RARVWAQL+ECPEL SHF+IP+A+V C G GRP PL+L+ P     A +        +E K + S      +    +   +K   +GG I   A+SAPF LL+IDFAA  +E+    D  NGPI +G  L+VP+L  G++ G LMWW+LI  D  E Y+S PR+   DPLWQDHWKPC+WP+  P  +  +Q + VQGAH D+++W+E+G     +S +RLREGP PC+CGLH  LP  R++ELND  R + Y   ++ +L  +  ++ TILDICDGG+ +  ++   +       +      LVSLE+  W+ AVLE+SC          A++ +A        Q+ +W GAG GE W+SA WG DV VLCGDGYY+ +G NRP+WSWLNFW+LRTALAP+LAR+VV+LPFQ RLMA+V+ECPSL+RV+GGG P+ D++ LGGW+H A+RRA+ E A+RA+ DED+DL VSLA++PHRFLTPPAL+MR+DLHHAIDWTA +A DGAYRRNVIHVPF +AG  HALALW+DVDLTYGAA GS+PSL +SGC  R++RQ+LRW+SGE V +   G +   VEIKA +D+  TPGIWT+C+I+E  G
Sbjct:  383 DSGKADDTLIGEVTREDGTKKEVLLHASLDPEAGGITWRPYTDMEGRSDSLCLLNLRCWFPPMLHDLHRYNIFKRAIWKSIGIIKER-------VDEDEVEMKEKGDKDIRILDIGTGTGLLSLEAVRAGATQVTACDGFTALAKVADEVVRSAGLERNICVVHKMSSALDEEEIGSIDLIVAEILDSTLLGEGYLSTLRDLYTRGLVDATTHVVPRRARVWAQLVECPELQSHFNIPSADVTCMGDGRPKPLHLSLPYIDDEANN-------WAEDKTLSSPKLSILSRKKREILGEK---SGGPISSKALSAPFILLEIDFAAAAAESKSSVDSSNGPIIVGPNLSVPILSAGSVQGALMWWELICSDGVETYSSAPRDIDIDPLWQDHWKPCIWPITLPFDITPSQEVSVQGAHHDRSIWIEIGSTP-HESLKRLREGPHPCLCGLHTFLPSERIIELNDARREEAYSECLRTILDAKDLEIKTILDICDGGMTLFNMIQGWKTASNSARL--HHLNLVSLEEDVWHGAVLEKSCL------LLKAESRNAFHAIHEIPQIKIWHGAGRGENWDSACWG-DVQVLCGDGYYSNIGVNRPIWSWLNFWILRTALAPILARNVVILPFQVRLMASVIECPSLFRVYGGGNPI-DEEKLGGWDHTAFRRAMSEAASRAVFDEDKDLAVSLADYPHRFLTPPALLMRMDLHHAIDWTASQAHDGAYRRNVIHVPFCRAGNAHALALWIDVDLTYGAAVGSEPSLSLSGCLHRYSRQSLRWMSGESVVEERTGERNKCVEIKAMLDVVSTPGIWTDCQIIEVDG 1176

The following BLAST results are available for this feature:

BLAST of NO20G02060.1 vs.

BLAST of NO20G02060.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22045.1	3.200e-257	54.87	Ankyrin repeat-containing protein [Nannochloropsis...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G02060	NO20G02060	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G02060.1	NO20G02060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G02060.1.cds1	NO20G02060.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:607238..611643+
coding sequence from alignment at chr20:607238..611643+

mRNA sequence

>NO20G02060.1 ID=NO20G02060.1|Name=NO20G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=4236bp
TTCATGCTTAACTTGCTTTGTTCCTCGTTGACCTTTCTTGTCTACATCGA
ATCGCCTGTGCTGCCGTTGTGGGGCGTACAGTTATTGGGAAAGCCTGACC
TTTTGACCTGACACGTCGAATCGTTTTCTTTTGTTGTCCCCCGCATCTTT
GCCTTGAGCGTTAAGGCCTGAGAATCGTCTATGTAACCGCGCTTGGGCAC
CTGGAACTCATGACCCTTTGCTTTGCTGCTTCTCGTACCAGTGAGAACGA
TGCCCTCTCGAGCTTTCTGTCCGGCAAGTGGGGAGGTGGTGATATAAGAT
GCGATTTTGGGGTCCAAGACTTAAGAGATACACACCACAGAGTTGTGAGG
AGTACACTTTCTTAGCTGCTTACACGAGGCTGTAGTCCTTTTATGATCCC
TGCCTTCATCATCACAACAGTGCTCGTTCCCCCTCCTTTTTTTCTACCCA
TCTACTGGCTCACGTTCCCACACCCTACATACAGGGCCATGACCACCATG
ACTGCCGGGGACCATCAAGCATTCTTAGCGGCATGCGGGACAGGGGACCT
AGAGAAAGTGAAGGTGTTTCTCGCAGCCGGTTTGCCAGCGTATCACCAAG
AGGAGGAGGGTGGCACGTCGTTACTTATGCACGCCGCTAAGGGCGCCCAC
CTCGAAGTGGTGCAAGCATTGCTAGAAGCAGGGGCGCCTTGGATGGCGTT
GGATCGGCAGGGTAAATGTGCGGGGGAGTACGCCATGGCCAGTGAGGTGG
AGGACGCGGAGCGAAAGCAATCCGTCATTGATACTTTGGTTAATCATGCG
GTAATGGCCGAGATGATATTAGGGACGATGCAAAACCAGGCAGCTGAAGC
TGTGCGCAAGGAGCAACAGCAAGAATCCGCACAATACCTGGGGGGGAACG
TACGCTACGAGAAGGACCGCTTGGTGGATGAGACGGAGGAAGGGGTGATG
ATGGAGTGGGAAGCACCACTTATGGAGGCGCACGCCAGCTTGCTGTGCGG
GGAAGCCAAGAACAGAGATGTGATGAATGTCGGCTTTGGGATGGGCATTA
TCGACGAGGCAATTCAACGGCATGGATGTCGATCTCACACCATCCTTGAG
GCGCATCCAACCGTGCTGGAGAAGATGGAAGCGGAGGGCTGGACACAGAA
GGCTGGCGTGACGGTCGAAAGGGGACGTTGGCAAGAGACCTTGCCTCGGC
TTGTGGCGGCGGGCAAGAAATACGATGCCTTATTTTTTGATACTTACGCC
GAGCACTATCGAGACATGCAAGCTTTCCATGAGTGGCTCCCAAAGCTGTT
GCGACTCGGGGGCATGTACTCCTTTTTCAATGGCCTATGCCCAGACAACC
TGTTCTTCCACGCCGTTACTTGCCAGCTGGTCAAGCTAGAGCTGGAGGCT
TTGAATTTTGTGGTGAACTTTGCCACGGTGGAAGTGGAAGGAGGCGCGGC
GAAGGAAGGGACCTGGGAAGGGCTACGACGTAAATACTGGCATGGACGAG
AGGAGTACTATTTGCCTGGTGAGCGCACGCTCTCTCATCTCATTTTCCTC
GTAAATCAACATTTAATTTGATTGTCAAAGATTCCATATATGCCTGACCT
CACTTTCCTCGCCCACTTACTCCTATTCTTGATTCGTTCCTTCCCCTCTC
TCAGTGGCTATCTTTCAAGGTAAAGGCGCAGACGTGGGAAAGGACGAAAT
GGAGCCAGCACGAGGCGAGACGCCAAGAGAGAACTCCACAAACGACAATG
AAACGGCCGACGACACTTTAGTGGGTGAGGCCCAAGTCGGCGAGGAGAAG
ACGGTCGAAGTCCTACTTCATGCTGCCCTCGATCCTGAGGCTGGTGGCCT
GACCTGGCGGCCATACCCGGACATGAGAGGACGTCTCGATAACGTCTGCC
TCCTTCAGCTCCGATGTTGGTTTCCCCCTATGTTGCATGATGCCCATCGA
CATACTATCTTTCGGCGGGCAATTCAAGGGGCGGTTCATAAAGTGCAACG
CCAAGACTCACGACAGCTTCTGCTACAGCAGCAGCAGCAGCAGCGGGGGC
AGGAAAGAGGAGGGAGGGAGGTCCGGGCGCTGGACATCGGTACAGGCACC
TCTTTGCTCAGCCTAGAAGCCGTAAGGGCCGGTGTCACGCATGTGGTGGC
TTGTGAGGGCTTTCCTGCCTTGGCAGCAGTGGCGCAAGAGGTGGTGCGCT
TCGCCGGAATGGAGAAGCAAATAGACGTCTTGAGCAAGCGAAGCACGGCG
CTGGAGAAGGAGGAGACGGGGTCCATCGATCTGGTCGTTTCCGAGCTGTT
GGATTCTACCTTGTTGGGCGAAGGCTACCTCAGCACGCTTCGTGACCTCT
ACACCCGGGGGCTTGTATCACCAAATGCCTGTGTGGTGCCGGCGCGGGCG
CGGGTGTGGGCGCAACTGATTGAATGTCCAGAGCTGCCCTCGCACTTTCA
CATCCCAACAGCCAATGTGGCATGTGCGGGGGGAGGACGGCCGCTGCCTC
TTTACTTGGCACCACCCACAAATGGGCCAGCAGCGGGCAGCAGCACAGCA
GTAGCAGAGACCGGAAGCGAAAGAAAGAGAGTGCGGTCAGATACTGACGA
CGCAACGGCTGCGACGACTGGGGATGCAAAGACCCAAAAACAGGGATTTG
CCGGAGGCCACATCCCTTGCATTGCCGTATCAGCGCCGTTTTCCCTGTTG
GACATTGACTTTGCAGCAGTGACATCCGAGACAAGCCCAGGAGCAGACGT
AAGGAACGGACCCATCCAGATGGGCCTGCCCCTCACGGTGCCGGTCCTGC
GAAAGGGTACGCTTCATGGCGTGCTGATGTGGTGGGATTTGATACCCTTG
GACAAGACTGAGGTCTATACCAGTATGCCACGCAACCCAAGCACGGACCC
GCTGTGGCAAGACCACTGGAAGCCCTGTGTCTGGCCCTTGGCCACGCCGA
GAGCCGTCGACGCTACACAAACCATTCCAGTCCAAGGCGCGCACGACGAT
CAGACCATGTGGGTGGAGGTGGGGGGAGACGATATGGACCAGTCTGCCCG
CCGGTTGCGCGAAGGGCCTAGCCCGTGTATATGTGGCCTGCATGCGTCGT
TGCCTGTGGGACGGGTTCTGGAATTGAATGATACAAGCCGGCTGGACACC
TATCGCCTGGCGATGCAGCAGGTCTTGGGGGAGAGGAAGGATGACGTGTG
CACCATCTTGGACATATGCGATGGCGGGTTGGTCGTGTCTTGCTTGCTTG
ACATCCGTCGAGATCTGGGCGGGGAGCACCCTATTTGCCCCCCATCTTCC
AAGTTGGTTAGCTTGGAGCAGCATCCATGGTACGCCGCGGTGCTGGAACG
AAGCTGCCGCAGTGGGGGCGGTACCAACTGTAGCAGTGCTCAAAACAATG
ACGCGGCCGATACTCAATTGGCAGTCTGGCGGGGGGCGGGGGCGGGAGAG
GGCTGGAATTCTGCAGCGTGGGGGGAAGATGTTCATGTGCTCTGCGGTGA
TGGCTATTATGCGAAGGTGGGGCCGAATCGCCCTGTGTGGAGCTGGCTCA
ACTTTTGGCTTCTGCGGACGGCACTGGCCCCTGTCCTGGCGCGTGACGTG
GTTGTGTTGCCTTTTCAGGCCCGTCTCATGGCAGCTGTAGTGGAGTGTCC
TTCTTTGTATCGGGTGCACGGAGGAGGGAGGCCAGTCGCGGACGACGACT
TGCTGGGAGGGTGGAATCACGATGCATATCGCCGAGCAGTGGAAGAAGGG
GCAGCACGTGCGATGTGCGACGAAGATAGGGATTTGCCCGTATCCTTGGC
TAACCATCCGCATCGCTTCTTGACGCCGCCGGCGTTGGTGATGCGTTTAG
ATTTGCACCATGCCATTGATTGGACAGCGCCAAGGGCAGAGGACGGAGCG
TACCGGCGAAACGTCATCCACGTACCGTTTGAGCAAGCAGGCTGCGTACA
TGCCTTGGCCTTGTGGGTGGATGTTGATTTGACTTACGGAGCGGCGACGG
GGAGTGACCCTTCTTTGGTTGTTTCTGGGTGTGAAACTCGGCATGCGCGG
CAGACATTAAGGTGGTTGAGTGGGGAGAAGGTGGGCCAAGGAGAGGAGGG
AGGGAAGAGGTGGGGCGTAGAGATCAAGGCAGCCATGGACTTGGCGGAAA
CACCAGGCATTTGGACGGAATGTCGGATCATGGAGAGAGGAGGAGGGGAC
GGGGGTGGGAAGAATGGGGAGGATGAACGCGATTGA

protein sequence of NO20G02060.1

>NO20G02060.1-protein ID=NO20G02060.1-protein|Name=NO20G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=846bp
MEPARGETPRENSTNDNETADDTLVGEAQVGEEKTVEVLLHAALDPEAGG
LTWRPYPDMRGRLDNVCLLQLRCWFPPMLHDAHRHTIFRRAIQGAVHKVQ
RQDSRQLLLQQQQQQRGQERGGREVRALDIGTGTSLLSLEAVRAGVTHVV
ACEGFPALAAVAQEVVRFAGMEKQIDVLSKRSTALEKEETGSIDLVVSEL
LDSTLLGEGYLSTLRDLYTRGLVSPNACVVPARARVWAQLIECPELPSHF
HIPTANVACAGGGRPLPLYLAPPTNGPAAGSSTAVAETGSERKRVRSDTD
DATAATTGDAKTQKQGFAGGHIPCIAVSAPFSLLDIDFAAVTSETSPGAD
VRNGPIQMGLPLTVPVLRKGTLHGVLMWWDLIPLDKTEVYTSMPRNPSTD
PLWQDHWKPCVWPLATPRAVDATQTIPVQGAHDDQTMWVEVGGDDMDQSA
RRLREGPSPCICGLHASLPVGRVLELNDTSRLDTYRLAMQQVLGERKDDV
CTILDICDGGLVVSCLLDIRRDLGGEHPICPPSSKLVSLEQHPWYAAVLE
RSCRSGGGTNCSSAQNNDAADTQLAVWRGAGAGEGWNSAAWGEDVHVLCG
DGYYAKVGPNRPVWSWLNFWLLRTALAPVLARDVVVLPFQARLMAAVVEC
PSLYRVHGGGRPVADDDLLGGWNHDAYRRAVEEGAARAMCDEDRDLPVSL
ANHPHRFLTPPALVMRLDLHHAIDWTAPRAEDGAYRRNVIHVPFEQAGCV
HALALWVDVDLTYGAATGSDPSLVVSGCETRHARQTLRWLSGEKVGQGEE
GGKRWGVEIKAAMDLAETPGIWTECRIMERGGGDGGGKNGEDERD*

mRNA from alignment at chr20:607238..611643+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G02060.1 ID=NO20G02060.1|Name=NO20G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=4406bp|location=Sequence derived from alignment at chr20:607238..611643+ (Nannochloropsis oceanica)
TTCATGCTTAACTTGCTTTGTTCCTCGTTGACCTTTCTTGTCTACATCGA
ATCGCCTGTGCTGCCGTTGTGGGGCGTACAGTTATTGGGAAAGCCTGACC
TTTTGACCTGACACGTCGAATCGTTTTCTTTTGTTGTCCCCCGCATCTTT
GCCTTGAGCGTTAAGGCCTGAGAATCGTCTATGTAACCGCGCTTGGGCAC
CTGGAACTCATGACCCTTTGCTTTGCTGCTTCTCGTACCAGTGAGAACGA
TGCCCTCTCGAGCTTTCTGTCCGGCAAGTGGGGAGGTGGTGATATAAGAT
GCGATTTTGGGGTCCAAGACTTAAGAGATACACACCACAGAGTTGTGAGG
AGTACACTTTCTTAGCTGCTTACACGAGGCTGTAGTCCTTTTATGATCCC
TGCCTTCATCATCACAACAGTGCTCGTTCCCCCTCCTTTTTTTCTACCCA
TCTACTGGCTCACGTTCCCACACCCTACATACAGGGCCATGACCACCATG
ACTGCCGGGGACCATCAAGCATTCTTAGCGGCATGCGGGACAGGGGACCT
AGAGAAAGTGAAGGTGTTTCTCGCAGCCGGTTTGCCAGCGTATCACCAAG
AGGAGGAGGGTGGCACGTCGTTACTTATGCACGCCGCTAAGGGCGCCCAC
CTCGAAGTGGTGCAAGCATTGCTAGAAGCAGGGGCGCCTTGGATGGCGTT
GGATCGGCAGGGTAAATGTGCGGGGGAGTACGCCATGGCCAGTGAGGTGG
AGGACGCGGAGCGAAAGCAATCCGTCATTGATACTTTGGTTAATCATGCG
GTAATGGCCGAGATGATATTAGGGACGATGCAAAACCAGGCAGCTGAAGC
TGTGCGCAAGGAGCAACAGCAAGAATCCGCACAATACCTGGGGGGGAACG
TACGCTACGAGAAGGACCGCTTGGTGGATGAGACGGAGGAAGGGGTGATG
ATGGAGTGGGAAGCACCACTTATGGAGGCGCACGCCAGCTTGCTGTGCGG
GGAAGCCAAGAACAGAGATGTGATGAATGTCGGCTTTGGGATGGGCATTA
TCGACGAGGCAATTCAACGGCATGGATGTCGATCTCACACCATCCTTGAG
GCGCATCCAACCGTGCTGGAGAAGATGGAAGCGGAGGGCTGGACACAGAA
GGCTGGCGTGACGGTCGAAAGGGGACGTTGGCAAGAGACCTTGCCTCGGC
TTGTGGCGGCGGGCAAGAAATACGATGCCTTATTTTTTGATACTTACGCC
GAGCACTATCGAGACATGCAAGCTTTCCATGAGTGGCTCCCAAAGCTGTT
GCGACTCGGGGGCATGTACTCCTTTTTCAATGGTAAGTGAGTGAGCGGGT
TGCGCCGAGTTTTTTAAGGTCGGTAATTACTTACGACGATGTCATTCTCC
GTTCACTCTCTGTCTCTTTTGTGCTGTGCTTTTCTTTCCTCTTCTACCCT
CTCTCAACCGCCGACACAACCACGACCCACATCTTTCTTTACATCAAATC
AGGCCTATGCCCAGACAACCTGTTCTTCCACGCCGTTACTTGCCAGCTGG
TCAAGCTAGAGCTGGAGGCTTTGAATTTTGTGGTGAACTTTGCCACGGTG
GAAGTGGAAGGAGGCGCGGCGAAGGAAGGGACCTGGGAAGGGCTACGACG
TAAATACTGGCATGGACGAGAGGAGTACTATTTGCCTGGTGAGCGCACGC
TCTCTCATCTCATTTTCCTCGTAAATCAACATTTAATTTGATTGTCAAAG
ATTCCATATATGCCTGACCTCACTTTCCTCGCCCACTTACTCCTATTCTT
GATTCGTTCCTTCCCCTCTCTCAGTGGCTATCTTTCAAGGTAAAGGCGCA
GACGTGGGAAAGGACGAAATGGAGCCAGCACGAGGCGAGACGCCAAGAGA
GAACTCCACAAACGACAATGAAACGGCCGACGACACTTTAGTGGGTGAGG
CCCAAGTCGGCGAGGAGAAGACGGTCGAAGTCCTACTTCATGCTGCCCTC
GATCCTGAGGCTGGTGGCCTGACCTGGCGGCCATACCCGGACATGAGAGG
ACGTCTCGATAACGTCTGCCTCCTTCAGCTCCGATGTTGGTTTCCCCCTA
TGTTGCATGATGCCCATCGACATACTATCTTTCGGCGGGCAATTCAAGGG
GCGGTTCATAAAGTGCAACGCCAAGACTCACGACAGCTTCTGCTACAGCA
GCAGCAGCAGCAGCGGGGGCAGGAAAGAGGAGGGAGGGAGGTCCGGGCGC
TGGACATCGGTACAGGCACCTCTTTGCTCAGCCTAGAAGCCGTAAGGGCC
GGTGTCACGCATGTGGTGGCTTGTGAGGGCTTTCCTGCCTTGGCAGCAGT
GGCGCAAGAGGTGGTGCGCTTCGCCGGAATGGAGAAGCAAATAGACGTCT
TGAGCAAGCGAAGCACGGCGCTGGAGAAGGAGGAGACGGGGTCCATCGAT
CTGGTCGTTTCCGAGCTGTTGGATTCTACCTTGTTGGGCGAAGGCTACCT
CAGCACGCTTCGTGACCTCTACACCCGGGGGCTTGTATCACCAAATGCCT
GTGTGGTGCCGGCGCGGGCGCGGGTGTGGGCGCAACTGATTGAATGTCCA
GAGCTGCCCTCGCACTTTCACATCCCAACAGCCAATGTGGCATGTGCGGG
GGGAGGACGGCCGCTGCCTCTTTACTTGGCACCACCCACAAATGGGCCAG
CAGCGGGCAGCAGCACAGCAGTAGCAGAGACCGGAAGCGAAAGAAAGAGA
GTGCGGTCAGATACTGACGACGCAACGGCTGCGACGACTGGGGATGCAAA
GACCCAAAAACAGGGATTTGCCGGAGGCCACATCCCTTGCATTGCCGTAT
CAGCGCCGTTTTCCCTGTTGGACATTGACTTTGCAGCAGTGACATCCGAG
ACAAGCCCAGGAGCAGACGTAAGGAACGGACCCATCCAGATGGGCCTGCC
CCTCACGGTGCCGGTCCTGCGAAAGGGTACGCTTCATGGCGTGCTGATGT
GGTGGGATTTGATACCCTTGGACAAGACTGAGGTCTATACCAGTATGCCA
CGCAACCCAAGCACGGACCCGCTGTGGCAAGACCACTGGAAGCCCTGTGT
CTGGCCCTTGGCCACGCCGAGAGCCGTCGACGCTACACAAACCATTCCAG
TCCAAGGCGCGCACGACGATCAGACCATGTGGGTGGAGGTGGGGGGAGAC
GATATGGACCAGTCTGCCCGCCGGTTGCGCGAAGGGCCTAGCCCGTGTAT
ATGTGGCCTGCATGCGTCGTTGCCTGTGGGACGGGTTCTGGAATTGAATG
ATACAAGCCGGCTGGACACCTATCGCCTGGCGATGCAGCAGGTCTTGGGG
GAGAGGAAGGATGACGTGTGCACCATCTTGGACATATGCGATGGCGGGTT
GGTCGTGTCTTGCTTGCTTGACATCCGTCGAGATCTGGGCGGGGAGCACC
CTATTTGCCCCCCATCTTCCAAGTTGGTTAGCTTGGAGCAGCATCCATGG
TACGCCGCGGTGCTGGAACGAAGCTGCCGCAGTGGGGGCGGTACCAACTG
TAGCAGTGCTCAAAACAATGACGCGGCCGATACTCAATTGGCAGTCTGGC
GGGGGGCGGGGGCGGGAGAGGGCTGGAATTCTGCAGCGTGGGGGGAAGAT
GTTCATGTGCTCTGCGGTGATGGCTATTATGCGAAGGTGGGGCCGAATCG
CCCTGTGTGGAGCTGGCTCAACTTTTGGCTTCTGCGGACGGCACTGGCCC
CTGTCCTGGCGCGTGACGTGGTTGTGTTGCCTTTTCAGGCCCGTCTCATG
GCAGCTGTAGTGGAGTGTCCTTCTTTGTATCGGGTGCACGGAGGAGGGAG
GCCAGTCGCGGACGACGACTTGCTGGGAGGGTGGAATCACGATGCATATC
GCCGAGCAGTGGAAGAAGGGGCAGCACGTGCGATGTGCGACGAAGATAGG
GATTTGCCCGTATCCTTGGCTAACCATCCGCATCGCTTCTTGACGCCGCC
GGCGTTGGTGATGCGTTTAGATTTGCACCATGCCATTGATTGGACAGCGC
CAAGGGCAGAGGACGGAGCGTACCGGCGAAACGTCATCCACGTACCGTTT
GAGCAAGCAGGCTGCGTACATGCCTTGGCCTTGTGGGTGGATGTTGATTT
GACTTACGGAGCGGCGACGGGGAGTGACCCTTCTTTGGTTGTTTCTGGGT
GTGAAACTCGGCATGCGCGGCAGACATTAAGGTGGTTGAGTGGGGAGAAG
GTGGGCCAAGGAGAGGAGGGAGGGAAGAGGTGGGGCGTAGAGATCAAGGC
AGCCATGGACTTGGCGGAAACACCAGGCATTTGGACGGAATGTCGGATCA
TGGAGAGAGGAGGAGGGGACGGGGGTGGGAAGAATGGGGAGGATGAACGC
GATTGA

Coding sequence (CDS) from alignment at chr20:607238..611643+

>NO20G02060.1 ID=NO20G02060.1|Name=NO20G02060.1|organism=Nannochloropsis oceanica|type=CDS|length=2538bp|location=Sequence derived from alignment at chr20:607238..611643+ (Nannochloropsis oceanica)
ATGGAGCCAGCACGAGGCGAGACGCCAAGAGAGAACTCCACAAACGACAA
TGAAACGGCCGACGACACTTTAGTGGGTGAGGCCCAAGTCGGCGAGGAGA
AGACGGTCGAAGTCCTACTTCATGCTGCCCTCGATCCTGAGGCTGGTGGC
CTGACCTGGCGGCCATACCCGGACATGAGAGGACGTCTCGATAACGTCTG
CCTCCTTCAGCTCCGATGTTGGTTTCCCCCTATGTTGCATGATGCCCATC
GACATACTATCTTTCGGCGGGCAATTCAAGGGGCGGTTCATAAAGTGCAA
CGCCAAGACTCACGACAGCTTCTGCTACAGCAGCAGCAGCAGCAGCGGGG
GCAGGAAAGAGGAGGGAGGGAGGTCCGGGCGCTGGACATCGGTACAGGCA
CCTCTTTGCTCAGCCTAGAAGCCGTAAGGGCCGGTGTCACGCATGTGGTG
GCTTGTGAGGGCTTTCCTGCCTTGGCAGCAGTGGCGCAAGAGGTGGTGCG
CTTCGCCGGAATGGAGAAGCAAATAGACGTCTTGAGCAAGCGAAGCACGG
CGCTGGAGAAGGAGGAGACGGGGTCCATCGATCTGGTCGTTTCCGAGCTG
TTGGATTCTACCTTGTTGGGCGAAGGCTACCTCAGCACGCTTCGTGACCT
CTACACCCGGGGGCTTGTATCACCAAATGCCTGTGTGGTGCCGGCGCGGG
CGCGGGTGTGGGCGCAACTGATTGAATGTCCAGAGCTGCCCTCGCACTTT
CACATCCCAACAGCCAATGTGGCATGTGCGGGGGGAGGACGGCCGCTGCC
TCTTTACTTGGCACCACCCACAAATGGGCCAGCAGCGGGCAGCAGCACAG
CAGTAGCAGAGACCGGAAGCGAAAGAAAGAGAGTGCGGTCAGATACTGAC
GACGCAACGGCTGCGACGACTGGGGATGCAAAGACCCAAAAACAGGGATT
TGCCGGAGGCCACATCCCTTGCATTGCCGTATCAGCGCCGTTTTCCCTGT
TGGACATTGACTTTGCAGCAGTGACATCCGAGACAAGCCCAGGAGCAGAC
GTAAGGAACGGACCCATCCAGATGGGCCTGCCCCTCACGGTGCCGGTCCT
GCGAAAGGGTACGCTTCATGGCGTGCTGATGTGGTGGGATTTGATACCCT
TGGACAAGACTGAGGTCTATACCAGTATGCCACGCAACCCAAGCACGGAC
CCGCTGTGGCAAGACCACTGGAAGCCCTGTGTCTGGCCCTTGGCCACGCC
GAGAGCCGTCGACGCTACACAAACCATTCCAGTCCAAGGCGCGCACGACG
ATCAGACCATGTGGGTGGAGGTGGGGGGAGACGATATGGACCAGTCTGCC
CGCCGGTTGCGCGAAGGGCCTAGCCCGTGTATATGTGGCCTGCATGCGTC
GTTGCCTGTGGGACGGGTTCTGGAATTGAATGATACAAGCCGGCTGGACA
CCTATCGCCTGGCGATGCAGCAGGTCTTGGGGGAGAGGAAGGATGACGTG
TGCACCATCTTGGACATATGCGATGGCGGGTTGGTCGTGTCTTGCTTGCT
TGACATCCGTCGAGATCTGGGCGGGGAGCACCCTATTTGCCCCCCATCTT
CCAAGTTGGTTAGCTTGGAGCAGCATCCATGGTACGCCGCGGTGCTGGAA
CGAAGCTGCCGCAGTGGGGGCGGTACCAACTGTAGCAGTGCTCAAAACAA
TGACGCGGCCGATACTCAATTGGCAGTCTGGCGGGGGGCGGGGGCGGGAG
AGGGCTGGAATTCTGCAGCGTGGGGGGAAGATGTTCATGTGCTCTGCGGT
GATGGCTATTATGCGAAGGTGGGGCCGAATCGCCCTGTGTGGAGCTGGCT
CAACTTTTGGCTTCTGCGGACGGCACTGGCCCCTGTCCTGGCGCGTGACG
TGGTTGTGTTGCCTTTTCAGGCCCGTCTCATGGCAGCTGTAGTGGAGTGT
CCTTCTTTGTATCGGGTGCACGGAGGAGGGAGGCCAGTCGCGGACGACGA
CTTGCTGGGAGGGTGGAATCACGATGCATATCGCCGAGCAGTGGAAGAAG
GGGCAGCACGTGCGATGTGCGACGAAGATAGGGATTTGCCCGTATCCTTG
GCTAACCATCCGCATCGCTTCTTGACGCCGCCGGCGTTGGTGATGCGTTT
AGATTTGCACCATGCCATTGATTGGACAGCGCCAAGGGCAGAGGACGGAG
CGTACCGGCGAAACGTCATCCACGTACCGTTTGAGCAAGCAGGCTGCGTA
CATGCCTTGGCCTTGTGGGTGGATGTTGATTTGACTTACGGAGCGGCGAC
GGGGAGTGACCCTTCTTTGGTTGTTTCTGGGTGTGAAACTCGGCATGCGC
GGCAGACATTAAGGTGGTTGAGTGGGGAGAAGGTGGGCCAAGGAGAGGAG
GGAGGGAAGAGGTGGGGCGTAGAGATCAAGGCAGCCATGGACTTGGCGGA
AACACCAGGCATTTGGACGGAATGTCGGATCATGGAGAGAGGAGGAGGGG
ACGGGGGTGGGAAGAATGGGGAGGATGAACGCGATTGA

Synonyms

Publications