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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr20 | genome | chr20:554742..559932 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO20G01850.1 vs.
Match: EWM22038.1 (dna-directed rna polymerase i complex subunit rpa2 [Nannochloropsis gaditana]) HSP 1 Score: 2116.7 bits (5483), Expect = 0.000e+0 Identity = 1045/1211 (86.29%), Postives = 1114/1211 (91.99%), Query Frame = 0
Query: 13 RSSRKKRSTSSSIRQQPQTQH-DPGPEGRSFTRGSLPPIDAIRRYKEIVAPHVESFNYFLDTGLRDAVACLNPVEARLSADGESGPLLKLWVEDCEVGFPTGDGGAKLITPRECRERGLMYAAPIRATFRVQREGGGVMRMQRVLGELPIMVGTSRCRLAGKTAAELVALKEEAGECGGYFVVNGIERIIRLLQMPRRNHVMAISRNTFKGRGTNYTDKGVIMRCVRPDQSSITVTLHYLTTGNAIFRVTILKQEFLVPIVLVLKALREMTDKELFQRVTLGDEDNTYLVTRVEMLLREATEFATFSRPKALAYLGFRFRAVLGLSSTHSDAECGRALLDRFVCVHLGSHGDKQECLLHMLRKLYTFVQGRCRADNPDSFMNQELLLPGHLYTVFVKEKLEEVLVNSFLQLRKECRDDLPRALAATQDEAYWTQLLTRHGSTVGKKAAYLLSTGNLVSRTGMDLMQISGYTVVAERLNFLRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHLATPARVLCYEGRAEGGKGGGGFSTDLLVSLGVSPGGAGSADGALILSKDHLPVLVDGRVIGGAPLDVCRRVVIALRRLKAASSPPPCEDGIVGPDTEKLRGKGRVDATLEIAFIPPARGGPAPGLFLFTGPARMIRPVLHLETGQIEYIGPMEQVFMEIALLPEDLRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSYPHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRDMRGGAKRPQLRFSNQRTAAVFAKRKHPGPVGGHLFEGLEADGLPVVGAWVKEGDVLYSAVDSLTGEVESGKHKESETACVEAVRLLGLEGAPGTTEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDVIINPHAFPSRMTIGMLIESMAGKSGSLHGMYQDATPFAFHEERRAIDYFGEQLRAAGYAYYGSEPLYSGLSGTLMHADIFIGVVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHLAHVCQKCGSLVGPTLTKSAVLSAAQAGPVTAVAAVASSQSKAICRLCGGQARAVALPYVFRYLANELTAMNIKLSLGLKEA 1223
R +K S SS + T+ DPGP+G SFTRG LPP A+ RYKE+VAPHVESFNYFLDTGLR+AV+CL PVE RLS DGESGPLLK WVE+CE+GFPTGDG L TPRECRERGLMYAAPIRA FR+QREGGGVMR+QR LGELPIMV +SRCRLAGK A ELVALKEEA ECGGYF+VNGIERIIRLLQ+PRRNH MAISRNTFKGRGT Y+DKGV MRCVRPDQSSITVTLHYLT GNA FRVTILKQEFLVP+VLVLKALR++TD+EL++R+TLGDEDNTYLVTRVEMLLRE+ +FATFSR KAL+YLG RFR VLGLS+ HSDA+CGRAL+DRFVC+HLG H DKQECLLHMLRKLY FVQGRCRADNPDSFMNQELLLPGHLY+VFVKEKLEE L +F QLRKECR+DL RALAATQDEAYW QLL RHG+ VGKKAAYLLSTGNLVSRTGMD+MQ+SGYT+VAERLNF RFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNH+AT ARVLC+E R +GG+ GG +TDLLV LGVSPGGAGSADGAL+LSKDHLPVL+DGRV+GGAP+D+CRRVV ALRR KA S+PPP D + GPD ++LRGKGRVDATLE+AFI P RGGPAPGLFLF+G ARM+RPVLHLETG +EYIGPMEQVFME+ALLPED+RAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSYPHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRDMRGG KRP LRFSN RT AV AKR+ PG VG LFE LEADGLPVVG WVKEGDVLYSAVDSLTGEVE GKHKESE ACVEAVRLLGLEG G TEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPD+IINPHAFPSRMTIGMLIESMAGKSGSLHGMYQDATPF+FHE+RRAIDYFGEQLRAAGYAY+GSEPLYSGLSGTLMHADIFIG+VYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHLAHVCQ+CGSLVGPT+TKS VLSAAQAG +TAVAAVASSQ+K ICR CGG+AR VALPYVFRYL NEL AMNIKL LGL+EA
Sbjct: 21 RIKKKHISNGSSQGRHADTEQVDPGPDGPSFTRGPLPPAAAVCRYKEVVAPHVESFNYFLDTGLREAVSCLFPVELRLSKDGESGPLLKSWVEECEIGFPTGDGSTGLYTPRECRERGLMYAAPIRAVFRIQREGGGVMRVQRTLGELPIMVCSSRCRLAGKKAEELVALKEEACECGGYFIVNGIERIIRLLQLPRRNHAMAISRNTFKGRGTGYSDKGVTMRCVRPDQSSITVTLHYLTNGNATFRVTILKQEFLVPVVLVLKALRDLTDEELYERITLGDEDNTYLVTRVEMLLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHSDADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSFMNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEAYWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFFRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHVATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKDHLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDAQRLRGKGRVDATLEVAFIHPVRGGPAPGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSYPHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRDMRGGPKRPDLRFSNLRTPAVVAKRQFPGRVGDPLFEKLEADGLPVVGTWVKEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIINPHAFPSRMTIGMLIESMAGKSGSLHGMYQDATPFSFHEDRRAIDYFGEQLRAAGYAYFGSEPLYSGLSGTLMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHLAHVCQECGSLVGPTMTKSTVLSAAQAGTMTAVAAVASSQAKVICRACGGKARTVALPYVFRYLTNELAAMNIKLRLGLREA 1231
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO20G01850.1 ID=NO20G01850.1|Name=NO20G01850.1|organism=Nannochloropsis oceanica|type=mRNA|length=5191bp
CCCTTGATCCCCCAGACATTCAGGCCTTGGCCCCCCCAAACAGCGTATTA
AGTGACACCAAACAAAAAAATCGTATGAAAATTGAGAAATAAATATGGCG
ATTACTAGCGTGACTGCAACAAGCCCCCCCAGAAGCAGCAGGAAGAAGCG
CTCCACCAGCAGCAGCATACGCCAGCAACCTCAGACGCAGCATGATCCCG
GTCCCGAAGGCCGTAGTTTTACGCGAGGCAGCTTGCCCCCTATTGATGCT
ATCCGACGGTACAAGGAAATAGTGGCTCCACATGTGGAGTCATTCAATTA
CTTTCTTGACACGGGATTGAGAGACGCGGTGGCATGCCTCAATCCGGTCG
AAGCTCGGTTAAGTGCTGACGGCGAGAGCGGACCTTTGCTGAAATTATGG
GTGGAGGACTGTGAGGTGGGCTTCCCGACAGGAGATGGAGGAGCGAAGCT
CATCACTCCGCGCGAATGCAGAGAGCGTGGATTGATGTATGCGGCGCCGA
TTCGTGCCACGTTTCGCGTCCAGCGTGAAGGCGGCGGCGTCATGAGGATG
CAGCGAGTCTTGGGAGAGTTGCCCATCATGGTGGGCACTAGCCGCTGTCG
ATTGGCCGGTAAGACGGCCGCGGAGTTGGTGGCGCTCAAGGAGGAGGCTG
GCGAGTGCGGCGGATACTTTGTCGTGAACGGAATCGAGCGCATTATCCGT
TTGCTGCAGATGCCCCGGCGGAACCACGTAATGGCCATTTCCCGCAACAC
CTTCAAGGGTCGCGGCACGAACTACACAGATAAGGGCGTGATCATGCGCT
GCGTTCGGCCCGACCAGTCCAGCATCACCGTCACGCTTCACTACTTGACC
ACTGGTAACGCCATATTTCGGGTCACCATCTTGAAACAAGAGTTCTTGGT
CCCCATTGTGTTGGTGCTCAAGGCTCTGCGGGAGATGACAGACAAGGAGC
TTTTCCAGCGTGTGACGCTGGGCGACGAGGATAACACATATCTGGTCACC
CGCGTGGAGATGCTGTTGCGAGAAGCAACGGAGTTCGCCACCTTCTCCCG
CCCCAAAGCACTAGCCTACCTTGGCTTCCGCTTCCGTGCCGTGCTAGGTT
TGAGCAGTACTCACTCAGACGCCGAGTGCGGACGTGCTTTGTTGGACCGT
TTCGTGTGCGTGCATTTGGGGAGTCATGGTGACAAGCAAGAGTGTCTCCT
GCACATGCTTCGCAAACTCTACACGTTCGTGCAAGGCCGCTGCCGCGCAG
ACAACCCGGACTCGTTCATGAATCAAGAGCTGCTCCTCCCTGGTCATTTA
TACACGGTGTTTGTCAAAGAGAAGTTGGAGGAGGTATTGGTCAACTCCTT
CTTGCAGCTGCGCAAGGAGTGCCGCGATGACTTACCACGTGCCTTGGCGG
CGACCCAGGATGAGGCATACTGGACACAGCTGTTGACACGGCATGGGTCG
ACGGTTGGAAAGAAGGCGGCTTATCTTCTCTCAACAGGCAATTTAGTAAG
TCGGACGGGTATGGATCTGATGCAGATTTCGGGCTACACCGTCGTCGCAG
AGCGGCTGAACTTCCTCCGCTTCTTGTCCCACTTCCAGTCTGTCCACCGT
GGGCAGTTTTTCACTACCATGAAGACCACCGCCGTGCGCAAGCTTTTGCC
CGAGTCATTCGGCTTTCTTTGCCCCGTCCACACACCCGACGGTAGCCCCT
GTGGTCTTCTCAATCACCTAGCCACACCCGCTCGTGTACTATGCTACGAG
GGCCGGGCCGAGGGAGGGAAGGGAGGAGGGGGATTTTCCACAGACCTGTT
GGTGAGTTTAGGGGTGTCACCTGGAGGGGCTGGAAGTGCTGATGGCGCGC
TGATTCTGTCCAAGGATCATTTGCCCGTCCTGGTGGACGGCCGCGTGATA
GGTGGCGCCCCTCTTGACGTCTGCCGGCGTGTTGTCATTGCCTTGCGGCG
CCTGAAAGCGGCCTCCTCGCCGCCCCCTTGCGAGGACGGCATCGTCGGGC
CCGACACGGAGAAGCTGCGGGGGAAGGGCCGAGTAGACGCCACACTGGAG
ATTGCCTTCATCCCCCCTGCACGGGGTGGGCCGGCTCCTGGGCTATTTTT
GTTTACGGGACCTGCGCGCATGATTCGGCCGGTGCTGCACTTGGAGACGG
GACAAATAGAGTACATCGGGCCGATGGAGCAGGTGTTTATGGAGATTGCC
TTGCTGCCTGAGGACCTGCGTGCGGGAGAGACCACGCACCAGGAATTGGA
CCCAACCAACATGCTGAGTTTGGTGGCTTCCCTCACTCCATTTTCAGATT
ACAACCAAAGTCCCCGCAATATGTACCAGTGCCAGATGGGCAAGCAAACT
ATGGGCACGCCCACCACATCCTACCCGCACCGCACAGACAACAAGCTCTA
TCGCATCCTCACCCCTCAGGCACCCATCGTACAAACGCGCCGGCATGCTG
AGTACGGCATGGACGAGTTTCCACAGGGTACCAATGCGGTGGTGGCTGTC
ATCTCCTACACGGGCTACGACATGGAGGACGCCATGATTCTCTCCAAAGC
CTCGTACGATCGAGGCATGGCCGCCGCAGACGTGTATAAGACCAAATCTG
TGAGTCTCCGGCGGGACATGCGCGGCGGTGCCAAGCGACCACAGCTTCGT
TTCTCCAACCAACGCACAGCTGCCGTGTTTGCGAAACGCAAGCATCCCGG
CCCGGTAGGTGGCCACCTATTCGAAGGCCTGGAGGCAGACGGTCTCCCCG
TGGTCGGTGCGTGGGTTAAGGAAGGTGATGTACTCTACAGTGCGGTCGAC
TCCTTGACGGGTGAGGTGGAGAGCGGCAAACACAAGGAGTCGGAGACGGC
CTGTGTGGAAGCTGTGCGCCTGCTGGGCTTGGAAGGTGCCCCGGGGACCA
CGGAGCCATTGGACACCGTCTCCATCACCCTTCGCTTCCCCCGCCGCCCA
ATCATAGGCGACAAGTTTTCCTCGCGGCACGGGCAGAAGGGTGTCCTCTC
CATTCTCTGGCCGCAGGAGGATATGCCGTTTACCGAGTCGGGCATGTCCC
CCGACGTGATCATCAATCCCCATGCCTTCCCCTCCCGCATGACCATCGGT
ATGCTTATTGAGTCCATGGCGGGTAAGAGCGGTTCCCTCCACGGTATGTA
CCAAGATGCCACCCCCTTTGCTTTTCATGAGGAACGTCGGGCGATTGACT
ACTTTGGGGAACAGTTGCGGGCGGCAGGCTACGCGTACTATGGATCCGAG
CCCCTCTACAGCGGCTTGTCAGGCACACTCATGCACGCCGACATCTTCAT
TGGGGTAGTGTACTACCAGCGACTGCGGCATATGGTGTCGGACAAGTCTC
AGGTCCGTGCCACGGGGCCCGTGAACCAGCTGACGCGGCAGCCGATTAAA
GGGAGGAAGCGTCATGGTGGCATCCGGTTTGGAGAAATGGAGCGCGACTC
ACTCCTGTCTCATGGCACCTCCTACCTCTTGCACGACCGGCTTATGAACT
GCTCTGATCGACATCTCGCCCACGTCTGCCAGAAGTGTGGGAGTCTCGTC
GGACCGACGCTGACGAAAAGCGCCGTCTTGTCCGCCGCACAGGCGGGGCC
TGTGACGGCAGTGGCCGCTGTAGCGTCCTCACAATCGAAAGCCATATGCC
GATTGTGTGGTGGACAAGCGCGGGCTGTGGCATTACCGTACGTCTTTCGG
TACCTGGCCAACGAGCTGACGGCAATGAATATCAAGCTCAGTTTGGGGCT
TAAAGAAGCATAAAGAAGGAGGGGAGGGCTCTGGTAGGTTGATGGAAGGA
GGAGTAAGGAAGTAAGGAAAGGAAGTAACAAAGGCTAGTTAGTTCTTTTT
GGCGTTCCTACATACCTCTAGGACTATCGCATGCAACCTGACGTCCTCGA
GGACTTGCATACGAGGGGGAGCCTCCCAACAATAAATTGTTGTCATCCCT
TATTTCTTGTCCGAGTCTAATTAGCGACTTTGACAGGTTTTTTGACCTGG
CAAAGTCCCCGGACGGCCCACACAGGGCCAGGAGGAGAAGGGGAAGGAGG
ATAAAAGAGGAGGTCAGCGGGAACGCTACACATAGAGTGTCCGCATATCC
TGCCGCGGTTGACCAAACCGCAGATCATGGGGACGAGCTTCCCCACGGAC
CATACTCCTGCACACCCGTAGGATGTTACGTGCCCCATTGCCGTCCCGGG
ACACGAACTGTTCACAGGTGTCACACCAATACAGTCCTCGGAAACGCATC
GTCTCCCTCCTCCTCCTCTAGCCTGGCCTTTCCGTTCTCCCCAAGGGATC
ATGAGAATGTGCGGCCAGAAAAGCAGGATACCTTCTTCTGCGTCCAATTT
TATAGTTGCTATCATGCAAAAATGATCACCTGGCAATTAATCATTGCCAG
GTGTACCTTTTGGTACATCTCCAACACATGGTATGTGCCCTGCAACGGGC
ACATACCAAAATATTCACAATTTTCCCCTATGTGTTTTTCCCAAGCACCA
CCCCGCCACTTGACCTGTCGCACAAAAGATAAAATAGAATCAGGTCTACA
TATTTCACTACGTGACTTGGTGTGTCTTTTACATCCGTGTTGTGCATTTG
GCGTTCCCAAGTAATTTCTTCCCAGGTGGTCGTCGCCTCATGTTTTTTCA
GTGTTGCTGCTGCTGCGGCTGTCGCTGCTTTCTAAGCTTTTTGACATTTA
CAGCGTCTGGACGTGACGCCGCTGCATGTTGCAAACACGAAGAAAAATAG
AAGGTAATCGGGAGAAGAAAAGGGGGCCGTAGGGGCGACAAAAAGCAGGG
TTGACGATGCTTCGACCGCGAAGTCGTCGCTTCTTCTTCACTCACTCTTG
CGTTGCCGCTCCCTTTTAATGTGAGAACCCTGTAGGTTGTGGAGATACGT
TCGTATGGAAAAAGCGGGGGGAGAAGGAGTATGTGAGAGGGAGTGACGGA
GCCGAGACCGAATTTTATAATTATTGGAGACCACAATAGAAGGCAGCTTT
GTCCTTCGCTCCTATCTCTTCTGTTGCTGCGCGCGCCTGTGTGTAACTTG
TGCTACAAAAGGCTAGTTAGGTAGGTAGTAGGTATGCGGCCTAAAGGAAG
TCCGTAGATTTAAATTAGAGTGTGTGGAGCGAGATCAAGGAGTGTCGAAA
GGGGAAAGTGGAAGGCTAGAAATAAGAGAAATAAGCACGCG back to topprotein sequence of NO20G01850.1 >NO20G01850.1-protein ID=NO20G01850.1-protein|Name=NO20G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1223bp
MAITSVTATSPPRSSRKKRSTSSSIRQQPQTQHDPGPEGRSFTRGSLPPI
DAIRRYKEIVAPHVESFNYFLDTGLRDAVACLNPVEARLSADGESGPLLK
LWVEDCEVGFPTGDGGAKLITPRECRERGLMYAAPIRATFRVQREGGGVM
RMQRVLGELPIMVGTSRCRLAGKTAAELVALKEEAGECGGYFVVNGIERI
IRLLQMPRRNHVMAISRNTFKGRGTNYTDKGVIMRCVRPDQSSITVTLHY
LTTGNAIFRVTILKQEFLVPIVLVLKALREMTDKELFQRVTLGDEDNTYL
VTRVEMLLREATEFATFSRPKALAYLGFRFRAVLGLSSTHSDAECGRALL
DRFVCVHLGSHGDKQECLLHMLRKLYTFVQGRCRADNPDSFMNQELLLPG
HLYTVFVKEKLEEVLVNSFLQLRKECRDDLPRALAATQDEAYWTQLLTRH
GSTVGKKAAYLLSTGNLVSRTGMDLMQISGYTVVAERLNFLRFLSHFQSV
HRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHLATPARVLC
YEGRAEGGKGGGGFSTDLLVSLGVSPGGAGSADGALILSKDHLPVLVDGR
VIGGAPLDVCRRVVIALRRLKAASSPPPCEDGIVGPDTEKLRGKGRVDAT
LEIAFIPPARGGPAPGLFLFTGPARMIRPVLHLETGQIEYIGPMEQVFME
IALLPEDLRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGK
QTMGTPTTSYPHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVV
AVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRDMRGGAKRPQ
LRFSNQRTAAVFAKRKHPGPVGGHLFEGLEADGLPVVGAWVKEGDVLYSA
VDSLTGEVESGKHKESETACVEAVRLLGLEGAPGTTEPLDTVSITLRFPR
RPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDVIINPHAFPSRMT
IGMLIESMAGKSGSLHGMYQDATPFAFHEERRAIDYFGEQLRAAGYAYYG
SEPLYSGLSGTLMHADIFIGVVYYQRLRHMVSDKSQVRATGPVNQLTRQP
IKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHLAHVCQKCGS
LVGPTLTKSAVLSAAQAGPVTAVAAVASSQSKAICRLCGGQARAVALPYV
FRYLANELTAMNIKLSLGLKEA* back to topmRNA from alignment at chr20:554742..559932- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO20G01850.1 ID=NO20G01850.1|Name=NO20G01850.1|organism=Nannochloropsis oceanica|type=mRNA|length=5191bp|location=Sequence derived from alignment at chr20:554742..559932- (Nannochloropsis oceanica)
CCCTTGATCCCCCAGACATTCAGGCCTTGGCCCCCCCAAACAGCGTATTA
AGTGACACCAAACAAAAAAATCGTATGAAAATTGAGAAATAAATATGGCG
ATTACTAGCGTGACTGCAACAAGCCCCCCCAGAAGCAGCAGGAAGAAGCG
CTCCACCAGCAGCAGCATACGCCAGCAACCTCAGACGCAGCATGATCCCG
GTCCCGAAGGCCGTAGTTTTACGCGAGGCAGCTTGCCCCCTATTGATGCT
ATCCGACGGTACAAGGAAATAGTGGCTCCACATGTGGAGTCATTCAATTA
CTTTCTTGACACGGGATTGAGAGACGCGGTGGCATGCCTCAATCCGGTCG
AAGCTCGGTTAAGTGCTGACGGCGAGAGCGGACCTTTGCTGAAATTATGG
GTGGAGGACTGTGAGGTGGGCTTCCCGACAGGAGATGGAGGAGCGAAGCT
CATCACTCCGCGCGAATGCAGAGAGCGTGGATTGATGTATGCGGCGCCGA
TTCGTGCCACGTTTCGCGTCCAGCGTGAAGGCGGCGGCGTCATGAGGATG
CAGCGAGTCTTGGGAGAGTTGCCCATCATGGTGGGCACTAGCCGCTGTCG
ATTGGCCGGTAAGACGGCCGCGGAGTTGGTGGCGCTCAAGGAGGAGGCTG
GCGAGTGCGGCGGATACTTTGTCGTGAACGGAATCGAGCGCATTATCCGT
TTGCTGCAGATGCCCCGGCGGAACCACGTAATGGCCATTTCCCGCAACAC
CTTCAAGGGTCGCGGCACGAACTACACAGATAAGGGCGTGATCATGCGCT
GCGTTCGGCCCGACCAGTCCAGCATCACCGTCACGCTTCACTACTTGACC
ACTGGTAACGCCATATTTCGGGTCACCATCTTGAAACAAGAGTTCTTGGT
CCCCATTGTGTTGGTGCTCAAGGCTCTGCGGGAGATGACAGACAAGGAGC
TTTTCCAGCGTGTGACGCTGGGCGACGAGGATAACACATATCTGGTCACC
CGCGTGGAGATGCTGTTGCGAGAAGCAACGGAGTTCGCCACCTTCTCCCG
CCCCAAAGCACTAGCCTACCTTGGCTTCCGCTTCCGTGCCGTGCTAGGTT
TGAGCAGTACTCACTCAGACGCCGAGTGCGGACGTGCTTTGTTGGACCGT
TTCGTGTGCGTGCATTTGGGGAGTCATGGTGACAAGCAAGAGTGTCTCCT
GCACATGCTTCGCAAACTCTACACGTTCGTGCAAGGCCGCTGCCGCGCAG
ACAACCCGGACTCGTTCATGAATCAAGAGCTGCTCCTCCCTGGTCATTTA
TACACGGTGTTTGTCAAAGAGAAGTTGGAGGAGGTATTGGTCAACTCCTT
CTTGCAGCTGCGCAAGGAGTGCCGCGATGACTTACCACGTGCCTTGGCGG
CGACCCAGGATGAGGCATACTGGACACAGCTGTTGACACGGCATGGGTCG
ACGGTTGGAAAGAAGGCGGCTTATCTTCTCTCAACAGGCAATTTAGTAAG
TCGGACGGGTATGGATCTGATGCAGATTTCGGGCTACACCGTCGTCGCAG
AGCGGCTGAACTTCCTCCGCTTCTTGTCCCACTTCCAGTCTGTCCACCGT
GGGCAGTTTTTCACTACCATGAAGACCACCGCCGTGCGCAAGCTTTTGCC
CGAGTCATTCGGCTTTCTTTGCCCCGTCCACACACCCGACGGTAGCCCCT
GTGGTCTTCTCAATCACCTAGCCACACCCGCTCGTGTACTATGCTACGAG
GGCCGGGCCGAGGGAGGGAAGGGAGGAGGGGGATTTTCCACAGACCTGTT
GGTGAGTTTAGGGGTGTCACCTGGAGGGGCTGGAAGTGCTGATGGCGCGC
TGATTCTGTCCAAGGATCATTTGCCCGTCCTGGTGGACGGCCGCGTGATA
GGTGGCGCCCCTCTTGACGTCTGCCGGCGTGTTGTCATTGCCTTGCGGCG
CCTGAAAGCGGCCTCCTCGCCGCCCCCTTGCGAGGACGGCATCGTCGGGC
CCGACACGGAGAAGCTGCGGGGGAAGGGCCGAGTAGACGCCACACTGGAG
ATTGCCTTCATCCCCCCTGCACGGGGTGGGCCGGCTCCTGGGCTATTTTT
GTTTACGGGACCTGCGCGCATGATTCGGCCGGTGCTGCACTTGGAGACGG
GACAAATAGAGTACATCGGGCCGATGGAGCAGGTGTTTATGGAGATTGCC
TTGCTGCCTGAGGACCTGCGTGCGGGAGAGACCACGCACCAGGAATTGGA
CCCAACCAACATGCTGAGTTTGGTGGCTTCCCTCACTCCATTTTCAGATT
ACAACCAAAGTCCCCGCAATATGTACCAGTGCCAGATGGGCAAGCAAACT
ATGGGCACGCCCACCACATCCTACCCGCACCGCACAGACAACAAGCTCTA
TCGCATCCTCACCCCTCAGGCACCCATCGTACAAACGCGCCGGCATGCTG
AGTACGGCATGGACGAGTTTCCACAGGGTACCAATGCGGTGGTGGCTGTC
ATCTCCTACACGGGCTACGACATGGAGGACGCCATGATTCTCTCCAAAGC
CTCGTACGATCGAGGCATGGCCGCCGCAGACGTGTATAAGACCAAATCTG
TGAGTCTCCGGCGGGACATGCGCGGCGGTGCCAAGCGACCACAGCTTCGT
TTCTCCAACCAACGCACAGCTGCCGTGTTTGCGAAACGCAAGCATCCCGG
CCCGGTAGGTGGCCACCTATTCGAAGGCCTGGAGGCAGACGGTCTCCCCG
TGGTCGGTGCGTGGGTTAAGGAAGGTGATGTACTCTACAGTGCGGTCGAC
TCCTTGACGGGTGAGGTGGAGAGCGGCAAACACAAGGAGTCGGAGACGGC
CTGTGTGGAAGCTGTGCGCCTGCTGGGCTTGGAAGGTGCCCCGGGGACCA
CGGAGCCATTGGACACCGTCTCCATCACCCTTCGCTTCCCCCGCCGCCCA
ATCATAGGCGACAAGTTTTCCTCGCGGCACGGGCAGAAGGGTGTCCTCTC
CATTCTCTGGCCGCAGGAGGATATGCCGTTTACCGAGTCGGGCATGTCCC
CCGACGTGATCATCAATCCCCATGCCTTCCCCTCCCGCATGACCATCGGT
ATGCTTATTGAGTCCATGGCGGGTAAGAGCGGTTCCCTCCACGGTATGTA
CCAAGATGCCACCCCCTTTGCTTTTCATGAGGAACGTCGGGCGATTGACT
ACTTTGGGGAACAGTTGCGGGCGGCAGGCTACGCGTACTATGGATCCGAG
CCCCTCTACAGCGGCTTGTCAGGCACACTCATGCACGCCGACATCTTCAT
TGGGGTAGTGTACTACCAGCGACTGCGGCATATGGTGTCGGACAAGTCTC
AGGTCCGTGCCACGGGGCCCGTGAACCAGCTGACGCGGCAGCCGATTAAA
GGGAGGAAGCGTCATGGTGGCATCCGGTTTGGAGAAATGGAGCGCGACTC
ACTCCTGTCTCATGGCACCTCCTACCTCTTGCACGACCGGCTTATGAACT
GCTCTGATCGACATCTCGCCCACGTCTGCCAGAAGTGTGGGAGTCTCGTC
GGACCGACGCTGACGAAAAGCGCCGTCTTGTCCGCCGCACAGGCGGGGCC
TGTGACGGCAGTGGCCGCTGTAGCGTCCTCACAATCGAAAGCCATATGCC
GATTGTGTGGTGGACAAGCGCGGGCTGTGGCATTACCGTACGTCTTTCGG
TACCTGGCCAACGAGCTGACGGCAATGAATATCAAGCTCAGTTTGGGGCT
TAAAGAAGCATAAAGAAGGAGGGGAGGGCTCTGGTAGGTTGATGGAAGGA
GGAGTAAGGAAGTAAGGAAAGGAAGTAACAAAGGCTAGTTAGTTCTTTTT
GGCGTTCCTACATACCTCTAGGACTATCGCATGCAACCTGACGTCCTCGA
GGACTTGCATACGAGGGGGAGCCTCCCAACAATAAATTGTTGTCATCCCT
TATTTCTTGTCCGAGTCTAATTAGCGACTTTGACAGGTTTTTTGACCTGG
CAAAGTCCCCGGACGGCCCACACAGGGCCAGGAGGAGAAGGGGAAGGAGG
ATAAAAGAGGAGGTCAGCGGGAACGCTACACATAGAGTGTCCGCATATCC
TGCCGCGGTTGACCAAACCGCAGATCATGGGGACGAGCTTCCCCACGGAC
CATACTCCTGCACACCCGTAGGATGTTACGTGCCCCATTGCCGTCCCGGG
ACACGAACTGTTCACAGGTGTCACACCAATACAGTCCTCGGAAACGCATC
GTCTCCCTCCTCCTCCTCTAGCCTGGCCTTTCCGTTCTCCCCAAGGGATC
ATGAGAATGTGCGGCCAGAAAAGCAGGATACCTTCTTCTGCGTCCAATTT
TATAGTTGCTATCATGCAAAAATGATCACCTGGCAATTAATCATTGCCAG
GTGTACCTTTTGGTACATCTCCAACACATGGTATGTGCCCTGCAACGGGC
ACATACCAAAATATTCACAATTTTCCCCTATGTGTTTTTCCCAAGCACCA
CCCCGCCACTTGACCTGTCGCACAAAAGATAAAATAGAATCAGGTCTACA
TATTTCACTACGTGACTTGGTGTGTCTTTTACATCCGTGTTGTGCATTTG
GCGTTCCCAAGTAATTTCTTCCCAGGTGGTCGTCGCCTCATGTTTTTTCA
GTGTTGCTGCTGCTGCGGCTGTCGCTGCTTTCTAAGCTTTTTGACATTTA
CAGCGTCTGGACGTGACGCCGCTGCATGTTGCAAACACGAAGAAAAATAG
AAGGTAATCGGGAGAAGAAAAGGGGGCCGTAGGGGCGACAAAAAGCAGGG
TTGACGATGCTTCGACCGCGAAGTCGTCGCTTCTTCTTCACTCACTCTTG
CGTTGCCGCTCCCTTTTAATGTGAGAACCCTGTAGGTTGTGGAGATACGT
TCGTATGGAAAAAGCGGGGGGAGAAGGAGTATGTGAGAGGGAGTGACGGA
GCCGAGACCGAATTTTATAATTATTGGAGACCACAATAGAAGGCAGCTTT
GTCCTTCGCTCCTATCTCTTCTGTTGCTGCGCGCGCCTGTGTGTAACTTG
TGCTACAAAAGGCTAGTTAGGTAGGTAGTAGGTATGCGGCCTAAAGGAAG
TCCGTAGATTTAAATTAGAGTGTGTGGAGCGAGATCAAGGAGTGTCGAAA
GGGGAAAGTGGAAGGCTAGAAATAAGAGAAATAAGCACGCG back to topCoding sequence (CDS) from alignment at chr20:554742..559932- >NO20G01850.1 ID=NO20G01850.1|Name=NO20G01850.1|organism=Nannochloropsis oceanica|type=CDS|length=3669bp|location=Sequence derived from alignment at chr20:554742..559932- (Nannochloropsis oceanica)
ATGGCGATTACTAGCGTGACTGCAACAAGCCCCCCCAGAAGCAGCAGGAA
GAAGCGCTCCACCAGCAGCAGCATACGCCAGCAACCTCAGACGCAGCATG
ATCCCGGTCCCGAAGGCCGTAGTTTTACGCGAGGCAGCTTGCCCCCTATT
GATGCTATCCGACGGTACAAGGAAATAGTGGCTCCACATGTGGAGTCATT
CAATTACTTTCTTGACACGGGATTGAGAGACGCGGTGGCATGCCTCAATC
CGGTCGAAGCTCGGTTAAGTGCTGACGGCGAGAGCGGACCTTTGCTGAAA
TTATGGGTGGAGGACTGTGAGGTGGGCTTCCCGACAGGAGATGGAGGAGC
GAAGCTCATCACTCCGCGCGAATGCAGAGAGCGTGGATTGATGTATGCGG
CGCCGATTCGTGCCACGTTTCGCGTCCAGCGTGAAGGCGGCGGCGTCATG
AGGATGCAGCGAGTCTTGGGAGAGTTGCCCATCATGGTGGGCACTAGCCG
CTGTCGATTGGCCGGTAAGACGGCCGCGGAGTTGGTGGCGCTCAAGGAGG
AGGCTGGCGAGTGCGGCGGATACTTTGTCGTGAACGGAATCGAGCGCATT
ATCCGTTTGCTGCAGATGCCCCGGCGGAACCACGTAATGGCCATTTCCCG
CAACACCTTCAAGGGTCGCGGCACGAACTACACAGATAAGGGCGTGATCA
TGCGCTGCGTTCGGCCCGACCAGTCCAGCATCACCGTCACGCTTCACTAC
TTGACCACTGGTAACGCCATATTTCGGGTCACCATCTTGAAACAAGAGTT
CTTGGTCCCCATTGTGTTGGTGCTCAAGGCTCTGCGGGAGATGACAGACA
AGGAGCTTTTCCAGCGTGTGACGCTGGGCGACGAGGATAACACATATCTG
GTCACCCGCGTGGAGATGCTGTTGCGAGAAGCAACGGAGTTCGCCACCTT
CTCCCGCCCCAAAGCACTAGCCTACCTTGGCTTCCGCTTCCGTGCCGTGC
TAGGTTTGAGCAGTACTCACTCAGACGCCGAGTGCGGACGTGCTTTGTTG
GACCGTTTCGTGTGCGTGCATTTGGGGAGTCATGGTGACAAGCAAGAGTG
TCTCCTGCACATGCTTCGCAAACTCTACACGTTCGTGCAAGGCCGCTGCC
GCGCAGACAACCCGGACTCGTTCATGAATCAAGAGCTGCTCCTCCCTGGT
CATTTATACACGGTGTTTGTCAAAGAGAAGTTGGAGGAGGTATTGGTCAA
CTCCTTCTTGCAGCTGCGCAAGGAGTGCCGCGATGACTTACCACGTGCCT
TGGCGGCGACCCAGGATGAGGCATACTGGACACAGCTGTTGACACGGCAT
GGGTCGACGGTTGGAAAGAAGGCGGCTTATCTTCTCTCAACAGGCAATTT
AGTAAGTCGGACGGGTATGGATCTGATGCAGATTTCGGGCTACACCGTCG
TCGCAGAGCGGCTGAACTTCCTCCGCTTCTTGTCCCACTTCCAGTCTGTC
CACCGTGGGCAGTTTTTCACTACCATGAAGACCACCGCCGTGCGCAAGCT
TTTGCCCGAGTCATTCGGCTTTCTTTGCCCCGTCCACACACCCGACGGTA
GCCCCTGTGGTCTTCTCAATCACCTAGCCACACCCGCTCGTGTACTATGC
TACGAGGGCCGGGCCGAGGGAGGGAAGGGAGGAGGGGGATTTTCCACAGA
CCTGTTGGTGAGTTTAGGGGTGTCACCTGGAGGGGCTGGAAGTGCTGATG
GCGCGCTGATTCTGTCCAAGGATCATTTGCCCGTCCTGGTGGACGGCCGC
GTGATAGGTGGCGCCCCTCTTGACGTCTGCCGGCGTGTTGTCATTGCCTT
GCGGCGCCTGAAAGCGGCCTCCTCGCCGCCCCCTTGCGAGGACGGCATCG
TCGGGCCCGACACGGAGAAGCTGCGGGGGAAGGGCCGAGTAGACGCCACA
CTGGAGATTGCCTTCATCCCCCCTGCACGGGGTGGGCCGGCTCCTGGGCT
ATTTTTGTTTACGGGACCTGCGCGCATGATTCGGCCGGTGCTGCACTTGG
AGACGGGACAAATAGAGTACATCGGGCCGATGGAGCAGGTGTTTATGGAG
ATTGCCTTGCTGCCTGAGGACCTGCGTGCGGGAGAGACCACGCACCAGGA
ATTGGACCCAACCAACATGCTGAGTTTGGTGGCTTCCCTCACTCCATTTT
CAGATTACAACCAAAGTCCCCGCAATATGTACCAGTGCCAGATGGGCAAG
CAAACTATGGGCACGCCCACCACATCCTACCCGCACCGCACAGACAACAA
GCTCTATCGCATCCTCACCCCTCAGGCACCCATCGTACAAACGCGCCGGC
ATGCTGAGTACGGCATGGACGAGTTTCCACAGGGTACCAATGCGGTGGTG
GCTGTCATCTCCTACACGGGCTACGACATGGAGGACGCCATGATTCTCTC
CAAAGCCTCGTACGATCGAGGCATGGCCGCCGCAGACGTGTATAAGACCA
AATCTGTGAGTCTCCGGCGGGACATGCGCGGCGGTGCCAAGCGACCACAG
CTTCGTTTCTCCAACCAACGCACAGCTGCCGTGTTTGCGAAACGCAAGCA
TCCCGGCCCGGTAGGTGGCCACCTATTCGAAGGCCTGGAGGCAGACGGTC
TCCCCGTGGTCGGTGCGTGGGTTAAGGAAGGTGATGTACTCTACAGTGCG
GTCGACTCCTTGACGGGTGAGGTGGAGAGCGGCAAACACAAGGAGTCGGA
GACGGCCTGTGTGGAAGCTGTGCGCCTGCTGGGCTTGGAAGGTGCCCCGG
GGACCACGGAGCCATTGGACACCGTCTCCATCACCCTTCGCTTCCCCCGC
CGCCCAATCATAGGCGACAAGTTTTCCTCGCGGCACGGGCAGAAGGGTGT
CCTCTCCATTCTCTGGCCGCAGGAGGATATGCCGTTTACCGAGTCGGGCA
TGTCCCCCGACGTGATCATCAATCCCCATGCCTTCCCCTCCCGCATGACC
ATCGGTATGCTTATTGAGTCCATGGCGGGTAAGAGCGGTTCCCTCCACGG
TATGTACCAAGATGCCACCCCCTTTGCTTTTCATGAGGAACGTCGGGCGA
TTGACTACTTTGGGGAACAGTTGCGGGCGGCAGGCTACGCGTACTATGGA
TCCGAGCCCCTCTACAGCGGCTTGTCAGGCACACTCATGCACGCCGACAT
CTTCATTGGGGTAGTGTACTACCAGCGACTGCGGCATATGGTGTCGGACA
AGTCTCAGGTCCGTGCCACGGGGCCCGTGAACCAGCTGACGCGGCAGCCG
ATTAAAGGGAGGAAGCGTCATGGTGGCATCCGGTTTGGAGAAATGGAGCG
CGACTCACTCCTGTCTCATGGCACCTCCTACCTCTTGCACGACCGGCTTA
TGAACTGCTCTGATCGACATCTCGCCCACGTCTGCCAGAAGTGTGGGAGT
CTCGTCGGACCGACGCTGACGAAAAGCGCCGTCTTGTCCGCCGCACAGGC
GGGGCCTGTGACGGCAGTGGCCGCTGTAGCGTCCTCACAATCGAAAGCCA
TATGCCGATTGTGTGGTGGACAAGCGCGGGCTGTGGCATTACCGTACGTC
TTTCGGTACCTGGCCAACGAGCTGACGGCAATGAATATCAAGCTCAGTTT
GGGGCTTAAAGAAGCATAA back to top
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