NO20G00910.1, NO20G00910.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00910.1
Unique Name	NO20G00910.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4258
Alignment location	chr20:300964..305334 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:300964..305334 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G00910.1 vs.
Match: EWM22127.1 (hypothetical protein Naga_100060g28 [Nannochloropsis gaditana])

HSP 1 Score: 515.8 bits (1327), Expect = 1.600e-142
Identity = 270/501 (53.89%), Postives = 337/501 (67.27%), Query Frame = 0

Query:   68 PSTQMSTISPAPAPPPPSLTFNPHTLTELVVPSKDFDSVRVHAISDIHVDYRKNLELFKRWCSSSSSGSCISGTAGDAGFAPTSLHQEKEERVFSILIIPGDIASSPSNVRAALAAARRRFHATFIVAGNHDLWVSSALAEEGVVDSIDKLTWLHQL-----------------------AATEAEDDSEDGDGDEEKKSSSSS----------------------SSSSCINRRGKIYTGPVLLQLPRSSPDPSLPLSFLLLVPLLSWYHPSWDTEPDLPTEVLAELYDGRPAFEQRWADFRFCKWPEEVVERKEGGRQEWGSITTKDKGIAEWFAEQNEGFLKDTRVRLETREGGNEGRAKKKVVVISFSHFLPREELCPEKRFLIEPLLPKVIGSQPLREQVERLKPDLHLFGHTHIPVDMEVGGIRYLQWPLGSVGEQGRQTGEMSVKGPVVVFDSKGGGGVQGEVPTRWGAHYKEEGRDVLNTELAPWVKMYWSQR 524
            P + + + S   + PPP +TF P +LTE+ V    +D+VR++A+SD+HVDYRKNLELF+ WCS  +SG+ +S  A         L QEK +R++SIL+IPGDIAS+P+N +A LAA RRRFHATFIVAGNHDLWVS++LA++GVV SIDKL W+HQ+                           +E+  E G G   ++  S                        S SS  +RRGK++TGPV    PR           LL++PLLSWYH SWDTEPDLP EV+A+LY+GRP FEQRWADFR CKWPEEV++     R+++ S+ T+ + +A WFA QNE FL DTRVR        EG   +K  VISFSHFLPREELCPEKRFL+EP+LPKVIGS PLR+QVE L+PDLH+FGHTHIP+D+ V GIRYLQWPLGSVGEQ RQT EM  +GPV+VFD + GG V G +PTRWGAHY+E  R+VL TELAPWVK YW ++
Sbjct:   74 PLSPLFSSSSTSSSPPPVMTFKPPSLTEITVTPDLYDAVRIYAMSDLHVDYRKNLELFQYWCSRPASGNSLSSLA---------LEQEKSDRIYSILLIPGDIASNPANFKAVLAATRRRFHATFIVAGNHDLWVSNSLADQGVVTSIDKLAWIHQVAEGNGDEPEGEEDTEDGVGGKEEEGGWSEEGKEGGPGVPGRRGESEGDWSGTPEPSANPGGSRAAHLPISPSSSSSRRGKVFTGPVRFHTPRGER--------LLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQ----DREDFVSLQTEKQELAVWFARQNEIFLADTRVR-------GEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLV-GTIPTRWGAHYREAARNVLETELAPWVKKYWERK 545

The following BLAST results are available for this feature:

BLAST of NO20G00910.1 vs.

BLAST of NO20G00910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22127.1	1.600e-142	53.89	hypothetical protein Naga_100060g28 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G00910	NO20G00910	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00910.1	NO20G00910.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00910.1.cds1	NO20G00910.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00910.1.cds2	NO20G00910.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:300964..305334+
coding sequence from alignment at chr20:300964..305334+

mRNA sequence

>NO20G00910.1 ID=NO20G00910.1|Name=NO20G00910.1|organism=Nannochloropsis oceanica|type=mRNA|length=4258bp
TCTCCTGTTTTTCTTTCTCTCTCTTTCCGTTTCTTGTCCATGCCTTGCTC
GGTCTCAATCTACGACTTGACACAAAACCAAAACACTCCTTTCCTTCCTC
TTCGCTGCCCGTTGCCGACTCGTCATTCATCCATGTGCAATCCACACACA
CCCCTTCCGCGCCCCCCTTCTCCCTCAGCAGTCACTTTCATCGCTATCAT
CTTCCTCAGTCTCCTCCTCGGCCTCCTCCTCCTCCTCCTACTCCTCTTCC
TATTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCATCCCTATCTTCTC
CTCTTCCTCCTCCTCCTTCATCTGATCCCAGTCTTCCCTTCCCTCCTCCA
GCGCCTGCAAACCCCGCAAGCTTACGGTTTTCACCCTTTTCTGCCCACTG
CTACTGCTGCTGCTGTTGCTGCTCCCGATGCCACTCGTCGTCTCTCTCCT
CATAGCCTTGCCCACCGACGTGTTGTCAGCCATCGGCCTTTTTTCTTTTC
GCACTGACCCTCTTCTTCTTCCTTGTTGCTGTCGCTGTCGTCTTCATTCT
CTTCCTTCCTCCCTCCCGTCCTCTCCCACCGCCAAAGCCACCACCCTTCC
TCTTCCACGCCACCACATTTCCCTTTCTCTTCCTTCTACTCCCTGAAGCT
GCCATAGTTGTCGTCTTCCATCCATTCCTTCCACTCATCTTATTTCCTTT
TTCTCCCTTCTCCTTCAAGTCACTGTCGGACCCTTCCGACGACACATTCC
ATTCCTCCCCGTCCTCGTCCTCCCTCCTCCTCAATCTCACCCCACCTATC
TTGTCCAAGGAGCTATTTATCGAAAGCAAGTTCACGATATTCTCGTACAC
ACTCTCCACCCTCGCCTCCCCGGTCCCTCCCTCCCCCCTTCCCTCCCTCA
TTCCCCCCCTCCCTTCTTTGCTCTCGCTTTTGAAGCAACATCGACCAACC
AGGCCGTCCCTCCGAGCCTTCCCACTCTTCCCACATACTCTACACCCTTA
AGATCAAGCAGTAAAAGCGTCTCTAAGTGCTGCTGCCCTCCCTCCCTCCC
TTTCCACTGTCCTCCCTCCCTCCCCCTCTGGATGAGAGTGCATCGACCCA
GTGCTCCTGTATCACCCTCACATTCAAACGCCTTGTCACTCATGCTCACG
AGTAAACCCAAGCCATCTTTTTGCCGCTGCACCGCGGAAGGAAAGAGGAG
CGGCATGCTTGTCTGAATGATTGGGCCTGTGCCATTTCCCTTCCTGGGAC
GGGTGGCGGTAGTGGGGGTTGGAGGAAGGTAACTGGTAGAAGTAGTAGCT
GCTTGCTTGCCTTGGCATATTTTTTCCTCTTTAATCTCCTCTGCTACCTC
CTTCTCTACCTTCTGCTCTTTCTCCTCCTCCTCCTCCTCCTCCCTTTCGT
CGTCATTTTCCTTATTCTTGTCTTTCGTCTTCGCCTTCTCCCAAGAAGTG
GGTGCTGCCGCCATCTCCGCGGTAGCAGCAGTTGTGGTGGCGATAAGAAA
AGTAGAATGAAGCCTTTCCTTGACACCAAGAACAGTTTTGAAACAAGGAG
GAGCAGGAGAGCTCGAAAGCTGCCTGTGCGTCAACCGCAGGTGGTGATGA
GGCGGCGAGCGCGAGAGCGCCAGGCTGCCCTTGGCTGGGGAGGAGGAGAA
GGACGAAGAGGAAGGGTGGGAGGGAAAGGGCAATGGTGCAGCAACATCAG
CAGCAGAGGAAAGTGTAAGATTGGGTGGTGAATTGTCAAATATTCCCCAA
TCGATGTCTTCAAAGCCTTTCATGGTGGCTGTGGAAGGGGGGATGAGGGA
GGAGGAGGAGGAGGAAGGGAGGTAGGTAGGTAGGTAGGTAGAGTGGAAGG
GAAGTGGAAGCAGATCAATGACTGGTGAAGATGGATGGCAAGCACATCTT
CGCCTTTGTGAACAGTCCAGTTTACGGAGAGATTTCTGGCTCTGTGCTGC
GCTAGGCATCGCCATAAAGAGGATAATGGCAGGTGCGCAGCCGGCCCATG
CGTGTTTTACGATGCACGCGGTTATATATTTTCTACAAAGCCAATTGTAC
TCACTGGCCTCTGCTTCCCGCTCCGCGCCAAGCCTTGGCGAAGTATAGGA
GAAGAAAATCCTATGCTAAATTTGCCTGTACGTGGGTGTGCTTGTGGGGC
TCGAAAAGGAACTTGTTAAGGCGTTGTTGCAGCTTCGTCATCGACACCTG
CCAAGGTAACCGGAAAGCGACTCACCCCACAATACTCCATCACCACTTCG
ACCACACTCTCACCACATCCACAGTGAGACAAGCCTACTTTGCCGAGGTA
GCTTGGTGAATGCGCACTTATAGCAGCCTTCGCCCGTCTCCCCCTGCATC
ACTTCCATTATTGCTGCCGTTGCTGCGTCTCGTCATTCTCTTGACCTACA
GTTTGAGGGTGTCCTTCTCCTCCACCACCACCACCCCTGCCTTCCTCTCC
TCCCTGTTGTCCCCATCGTCCTCGTCCTCCTTTTTAAGTCTCCGCAGGCG
CGCCCGCCGTCCATCTACGCAGATGTCTACCATCTCCCCTGCACCCGCCC
CACCGCCACCGTCCCTGACGTTCAACCCGCACACCCTCACCGAGCTCGTG
GTACCCTCCAAGGATTTTGATAGCGTCCGTGTCCACGCCATCTCGGACAT
CCATGTGGACTACAGAAAAAATTTGGAACTGTTTAAGCGTTGGTGCAGTA
GCAGCAGCAGTGGCAGTTGTATTAGTGGTACTGCTGGAGACGCGGGCTTT
GCCCCGACATCTCTCCATCAGGAGAAGGAGGAGCGGGTATTTTCTATTTT
GATTATCCCAGGTGATATCGCATCCAGCCCCTCTAACGTCCGCGCTGCTC
TTGCAGCGGCCCGTCGCCGTTTCCATGCCACATTCATTGTTGCAGGCAAC
CATGACTTGTGGGTTAGCAGCGCTTTGGCGGAAGAGGGGGTGGTGGATTC
TATAGATAAACTAACGTGGTTGCACCAACTAGCAGCGACCGAGGCAGAAG
ACGATTCGGAGGACGGGGATGGAGACGAAGAAAAGAAGAGCAGCAGCAGC
AGCAGCAGCAGCAGCTGTATCAACAGGCGTGGTAAAATCTACACCGGTCC
TGTCCTTCTCCAACTTCCCCGCTCCTCCCCCGATCCCTCCCTCCCTCTCT
CGTTTCTCCTGCTTGTGCCGTTACTCTCGTGGTATCACCCGTCATGGGAC
ACAGAGCCTGACTTACCCACTGAGGTCCTCGCGGAGCTTTATGATGGCCG
TCCTGCTTTCGAGCAACGCTGGGCCGACTTTAGATTTTGCAAGTGGCCGG
AGGAGGTAGTGGAAAGGAAAGAGGGAGGGAGGCAGGAGTGGGGGAGTATT
ACGACGAAGGACAAGGGAATAGCGGAATGGTTTGCCGAGCAGAATGAAGG
ATTTTTAAAGGATACCCGGGTACGCCTGGAAACGAGGGAAGGGGGGAATG
AGGGCAGGGCAAAGAAGAAAGTGGTGGTGATTTCTTTCTCTCATTTCCTT
CCGCGGGAGGAACTGTGTCCGGAGAAACGGTTTTTGATCGAGCCGTTGCT
GCCCAAAGTGATTGGAAGCCAGCCATTGAGAGAGCAAGTGGAGCGGTTGA
AGCCTGACTTGCATTTGTTCGGCCATACGCATATTCCCGTCGACATGGAG
GTGGGAGGAATACGGTATCTGCAATGGCCCCTTGGGTCGGTGGGGGAGCA
GGGACGTCAAACGGGCGAGATGAGCGTTAAGGGTCCCGTGGTCGTGTTTG
ATTCCAAAGGCGGTGGAGGGGTGCAGGGAGAGGTGCCGACGAGGTGGGGG
GCGCACTATAAAGAGGAGGGGAGGGATGTGCTAAACACGGAGCTCGCACC
GTGGGTGAAAATGTATTGGAGTCAACGCTGAGGGAGGGATAGAGGGAGGG
ACGGAGCGAAAGAGGGAGGAAGAACGTCCTAGGGTGAGGGTGCATTGACG
TTTACCACCAGGAAAAAGGGAGGGAGGGGGAGGGGCACTGAAAGATAGGA
GAATGTTGTTCTGCAGGGTAAGGGTTGGGAAGATGTGCGTAGGAGAGGTG
CACGTTTTTGTGCCAGAGCGAGTGAATTGTGTGTATGTGGGTGGGTGAGT
GAGGTAACTGTGCATGAAGACAAAGCAAAGCGGATGAGACTGAGAACAGA
AAGGAGGGTAGACGGGAAACCGATCGCTCGAGGAACAATTTTGGAAAATA
TTAGGAAAACTATGCTGAAAAAATACGAGAAAAATTAAACTGATAATATA
CGAGGGAA

protein sequence of NO20G00910.1

>NO20G00910.1-protein ID=NO20G00910.1-protein|Name=NO20G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MRTYSSLRPSPPASLPLLLPLLRLVILLTYSLRVSFSSTTTTPAFLSSLL
SPSSSSSFLSLRRRARRPSTQMSTISPAPAPPPPSLTFNPHTLTELVVPS
KDFDSVRVHAISDIHVDYRKNLELFKRWCSSSSSGSCISGTAGDAGFAPT
SLHQEKEERVFSILIIPGDIASSPSNVRAALAAARRRFHATFIVAGNHDL
WVSSALAEEGVVDSIDKLTWLHQLAATEAEDDSEDGDGDEEKKSSSSSSS
SSCINRRGKIYTGPVLLQLPRSSPDPSLPLSFLLLVPLLSWYHPSWDTEP
DLPTEVLAELYDGRPAFEQRWADFRFCKWPEEVVERKEGGRQEWGSITTK
DKGIAEWFAEQNEGFLKDTRVRLETREGGNEGRAKKKVVVISFSHFLPRE
ELCPEKRFLIEPLLPKVIGSQPLREQVERLKPDLHLFGHTHIPVDMEVGG
IRYLQWPLGSVGEQGRQTGEMSVKGPVVVFDSKGGGGVQGEVPTRWGAHY
KEEGRDVLNTELAPWVKMYWSQR*

mRNA from alignment at chr20:300964..305334+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G00910.1 ID=NO20G00910.1|Name=NO20G00910.1|organism=Nannochloropsis oceanica|type=mRNA|length=4371bp|location=Sequence derived from alignment at chr20:300964..305334+ (Nannochloropsis oceanica)
TCTCCTGTTTTTCTTTCTCTCTCTTTCCGTTTCTTGTCCATGCCTTGCTC
GGTCTCAATCTACGACTTGACACAAAACCAAAACACTCCTTTCCTTCCTC
TTCGCTGCCCGTTGCCGACTCGTCATTCATCCATGTGCAATCCACACACA
CCCCTTCCGCGCCCCCCTTCTCCCTCAGCAGTCACTTTCATCGCTATCAT
CTTCCTCAGTCTCCTCCTCGGCCTCCTCCTCCTCCTCCTACTCCTCTTCC
TATTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCATCCCTATCTTCTC
CTCTTCCTCCTCCTCCTTCATCTGATCCCAGTCTTCCCTTCCCTCCTCCA
GCGCCTGCAAACCCCGCAAGCTTACGGTTTTCACCCTTTTCTGCCCACTG
CTACTGCTGCTGCTGTTGCTGCTCCCGATGCCACTCGTCGTCTCTCTCCT
CATAGCCTTGCCCACCGACGTGTTGTCAGCCATCGGCCTTTTTTCTTTTC
GCACTGACCCTCTTCTTCTTCCTTGTTGCTGTCGCTGTCGTCTTCATTCT
CTTCCTTCCTCCCTCCCGTCCTCTCCCACCGCCAAAGCCACCACCCTTCC
TCTTCCACGCCACCACATTTCCCTTTCTCTTCCTTCTACTCCCTGAAGCT
GCCATAGTTGTCGTCTTCCATCCATTCCTTCCACTCATCTTATTTCCTTT
TTCTCCCTTCTCCTTCAAGTCACTGTCGGACCCTTCCGACGACACATTCC
ATTCCTCCCCGTCCTCGTCCTCCCTCCTCCTCAATCTCACCCCACCTATC
TTGTCCAAGGAGCTATTTATCGAAAGCAAGTTCACGATATTCTCGTACAC
ACTCTCCACCCTCGCCTCCCCGGTCCCTCCCTCCCCCCTTCCCTCCCTCA
TTCCCCCCCTCCCTTCTTTGCTCTCGCTTTTGAAGCAACATCGACCAACC
AGGCCGTCCCTCCGAGCCTTCCCACTCTTCCCACATACTCTACACCCTTA
AGATCAAGCAGTAAAAGCGTCTCTAAGTGCTGCTGCCCTCCCTCCCTCCC
TTTCCACTGTCCTCCCTCCCTCCCCCTCTGGATGAGAGTGCATCGACCCA
GTGCTCCTGTATCACCCTCACATTCAAACGCCTTGTCACTCATGCTCACG
AGTAAACCCAAGCCATCTTTTTGCCGCTGCACCGCGGAAGGAAAGAGGAG
CGGCATGCTTGTCTGAATGATTGGGCCTGTGCCATTTCCCTTCCTGGGAC
GGGTGGCGGTAGTGGGGGTTGGAGGAAGGTAACTGGTAGAAGTAGTAGCT
GCTTGCTTGCCTTGGCATATTTTTTCCTCTTTAATCTCCTCTGCTACCTC
CTTCTCTACCTTCTGCTCTTTCTCCTCCTCCTCCTCCTCCTCCCTTTCGT
CGTCATTTTCCTTATTCTTGTCTTTCGTCTTCGCCTTCTCCCAAGAAGTG
GGTGCTGCCGCCATCTCCGCGGTAGCAGCAGTTGTGGTGGCGATAAGAAA
AGTAGAATGAAGCCTTTCCTTGACACCAAGAACAGTTTTGAAACAAGGAG
GAGCAGGAGAGCTCGAAAGCTGCCTGTGCGTCAACCGCAGGTGGTGATGA
GGCGGCGAGCGCGAGAGCGCCAGGCTGCCCTTGGCTGGGGAGGAGGAGAA
GGACGAAGAGGAAGGGTGGGAGGGAAAGGGCAATGGTGCAGCAACATCAG
CAGCAGAGGAAAGTGTAAGATTGGGTGGTGAATTGTCAAATATTCCCCAA
TCGATGTCTTCAAAGCCTTTCATGGTGGCTGTGGAAGGGGGGATGAGGGA
GGAGGAGGAGGAGGAAGGGAGGTAGGTAGGTAGGTAGGTAGAGTGGAAGG
GAAGTGGAAGCAGATCAATGACTGGTGAAGATGGATGGCAAGCACATCTT
CGCCTTTGTGAACAGTCCAGTTTACGGAGAGATTTCTGGCTCTGTGCTGC
GCTAGGCATCGCCATAAAGAGGATAATGGCAGGTGCGCAGCCGGCCCATG
CGTGTTTTACGATGCACGCGGTTATATATTTTCTACAAAGCCAATTGTAC
TCACTGGCCTCTGCTTCCCGCTCCGCGCCAAGCCTTGGCGAAGTATAGGA
GAAGAAAATCCTATGCTAAATTTGCCTGTACGTGGGTGTGCTTGTGGGGC
TCGAAAAGGAACTTGTTAAGGCGTTGTTGCAGCTTCGTCATCGACACCTG
CCAAGGTAACCGGAAAGCGACTCACCCCACAATACTCCATCACCACTTCG
ACCACACTCTCACCACATCCACAGTGAGACAAGCCTACTTTGCCGAGGTA
GCTTGGTGAATGCGCACTTATAGCAGCCTTCGCCCGTCTCCCCCTGCATC
ACTTCCATTATTGCTGCCGTTGCTGCGTCTCGTCATTCTCTTGACCTACA
GTTTGAGGGTGTCCTTCTCCTCCACCACCACCACCCCTGCCTTCCTCTCC
TCCCTGTTGTCCCCATCGTCCTCGTCCTCCTTTTTAAGTCTCCGCAGGCG
CGCCCGCCGTCCATCTACGCAGATGTCTACCATCTCCCCTGCACCCGCCC
CACCGCCACCGTCCCTGACGTTCAACCCGCACACCCTCACCGAGCTCGTG
GTACCCTCCAAGGATTTTGATAGCGTCCGTGTCCACGCCATCTCGGACAT
CCATGTGGACTACAGAAAAAATTTGGAACTGTTTAAGCGTTGGTGCAGTA
GCAGCAGCAGTGGCAGTTGTATTAGTGGTACTGCTGGAGACGCGGGCTTT
GCCCCGACATCTCTCCATCAGGAGAAGGAGGAGCGGGTATTTTCTATTTT
GATTATCCCAGGTATGCTTCACTCAAAAGCTGGAAACCTTTGAAATGCAA
GTTTGTCTCCCAATCTCTCTCTTGCCCTCATCCCTCCGTTCCCTCCTTCC
CCCACTTTTTTCGGTCTTGCACAGGTGATATCGCATCCAGCCCCTCTAAC
GTCCGCGCTGCTCTTGCAGCGGCCCGTCGCCGTTTCCATGCCACATTCAT
TGTTGCAGGCAACCATGACTTGTGGGTTAGCAGCGCTTTGGCGGAAGAGG
GGGTGGTGGATTCTATAGATAAACTAACGTGGTTGCACCAACTAGCAGCG
ACCGAGGCAGAAGACGATTCGGAGGACGGGGATGGAGACGAAGAAAAGAA
GAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTATCAACAGGCGTGGTAAAA
TCTACACCGGTCCTGTCCTTCTCCAACTTCCCCGCTCCTCCCCCGATCCC
TCCCTCCCTCTCTCGTTTCTCCTGCTTGTGCCGTTACTCTCGTGGTATCA
CCCGTCATGGGACACAGAGCCTGACTTACCCACTGAGGTCCTCGCGGAGC
TTTATGATGGCCGTCCTGCTTTCGAGCAACGCTGGGCCGACTTTAGATTT
TGCAAGTGGCCGGAGGAGGTAGTGGAAAGGAAAGAGGGAGGGAGGCAGGA
GTGGGGGAGTATTACGACGAAGGACAAGGGAATAGCGGAATGGTTTGCCG
AGCAGAATGAAGGATTTTTAAAGGATACCCGGGTACGCCTGGAAACGAGG
GAAGGGGGGAATGAGGGCAGGGCAAAGAAGAAAGTGGTGGTGATTTCTTT
CTCTCATTTCCTTCCGCGGGAGGAACTGTGTCCGGAGAAACGGTTTTTGA
TCGAGCCGTTGCTGCCCAAAGTGATTGGAAGCCAGCCATTGAGAGAGCAA
GTGGAGCGGTTGAAGCCTGACTTGCATTTGTTCGGCCATACGCATATTCC
CGTCGACATGGAGGTGGGAGGAATACGGTATCTGCAATGGCCCCTTGGGT
CGGTGGGGGAGCAGGGACGTCAAACGGGCGAGATGAGCGTTAAGGGTCCC
GTGGTCGTGTTTGATTCCAAAGGCGGTGGAGGGGTGCAGGGAGAGGTGCC
GACGAGGTGGGGGGCGCACTATAAAGAGGAGGGGAGGGATGTGCTAAACA
CGGAGCTCGCACCGTGGGTGAAAATGTATTGGAGTCAACGCTGAGGGAGG
GATAGAGGGAGGGACGGAGCGAAAGAGGGAGGAAGAACGTCCTAGGGTGA
GGGTGCATTGACGTTTACCACCAGGAAAAAGGGAGGGAGGGGGAGGGGCA
CTGAAAGATAGGAGAATGTTGTTCTGCAGGGTAAGGGTTGGGAAGATGTG
CGTAGGAGAGGTGCACGTTTTTGTGCCAGAGCGAGTGAATTGTGTGTATG
TGGGTGGGTGAGTGAGGTAACTGTGCATGAAGACAAAGCAAAGCGGATGA
GACTGAGAACAGAAAGGAGGGTAGACGGGAAACCGATCGCTCGAGGAACA
ATTTTGGAAAATATTAGGAAAACTATGCTGAAAAAATACGAGAAAAATTA
AACTGATAATATACGAGGGAA

Coding sequence (CDS) from alignment at chr20:300964..305334+

>NO20G00910.1 ID=NO20G00910.1|Name=NO20G00910.1|organism=Nannochloropsis oceanica|type=CDS|length=1572bp|location=Sequence derived from alignment at chr20:300964..305334+ (Nannochloropsis oceanica)
ATGCGCACTTATAGCAGCCTTCGCCCGTCTCCCCCTGCATCACTTCCATT
ATTGCTGCCGTTGCTGCGTCTCGTCATTCTCTTGACCTACAGTTTGAGGG
TGTCCTTCTCCTCCACCACCACCACCCCTGCCTTCCTCTCCTCCCTGTTG
TCCCCATCGTCCTCGTCCTCCTTTTTAAGTCTCCGCAGGCGCGCCCGCCG
TCCATCTACGCAGATGTCTACCATCTCCCCTGCACCCGCCCCACCGCCAC
CGTCCCTGACGTTCAACCCGCACACCCTCACCGAGCTCGTGGTACCCTCC
AAGGATTTTGATAGCGTCCGTGTCCACGCCATCTCGGACATCCATGTGGA
CTACAGAAAAAATTTGGAACTGTTTAAGCGTTGGTGCAGTAGCAGCAGCA
GTGGCAGTTGTATTAGTGGTACTGCTGGAGACGCGGGCTTTGCCCCGACA
TCTCTCCATCAGGAGAAGGAGGAGCGGGTATTTTCTATTTTGATTATCCC
AGGTGATATCGCATCCAGCCCCTCTAACGTCCGCGCTGCTCTTGCAGCGG
CCCGTCGCCGTTTCCATGCCACATTCATTGTTGCAGGCAACCATGACTTG
TGGGTTAGCAGCGCTTTGGCGGAAGAGGGGGTGGTGGATTCTATAGATAA
ACTAACGTGGTTGCACCAACTAGCAGCGACCGAGGCAGAAGACGATTCGG
AGGACGGGGATGGAGACGAAGAAAAGAAGAGCAGCAGCAGCAGCAGCAGC
AGCAGCTGTATCAACAGGCGTGGTAAAATCTACACCGGTCCTGTCCTTCT
CCAACTTCCCCGCTCCTCCCCCGATCCCTCCCTCCCTCTCTCGTTTCTCC
TGCTTGTGCCGTTACTCTCGTGGTATCACCCGTCATGGGACACAGAGCCT
GACTTACCCACTGAGGTCCTCGCGGAGCTTTATGATGGCCGTCCTGCTTT
CGAGCAACGCTGGGCCGACTTTAGATTTTGCAAGTGGCCGGAGGAGGTAG
TGGAAAGGAAAGAGGGAGGGAGGCAGGAGTGGGGGAGTATTACGACGAAG
GACAAGGGAATAGCGGAATGGTTTGCCGAGCAGAATGAAGGATTTTTAAA
GGATACCCGGGTACGCCTGGAAACGAGGGAAGGGGGGAATGAGGGCAGGG
CAAAGAAGAAAGTGGTGGTGATTTCTTTCTCTCATTTCCTTCCGCGGGAG
GAACTGTGTCCGGAGAAACGGTTTTTGATCGAGCCGTTGCTGCCCAAAGT
GATTGGAAGCCAGCCATTGAGAGAGCAAGTGGAGCGGTTGAAGCCTGACT
TGCATTTGTTCGGCCATACGCATATTCCCGTCGACATGGAGGTGGGAGGA
ATACGGTATCTGCAATGGCCCCTTGGGTCGGTGGGGGAGCAGGGACGTCA
AACGGGCGAGATGAGCGTTAAGGGTCCCGTGGTCGTGTTTGATTCCAAAG
GCGGTGGAGGGGTGCAGGGAGAGGTGCCGACGAGGTGGGGGGCGCACTAT
AAAGAGGAGGGGAGGGATGTGCTAAACACGGAGCTCGCACCGTGGGTGAA
AATGTATTGGAGTCAACGCTGA

Synonyms

Publications