NO20G00260.2, NO20G00260.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00260.2
Unique Name	NO20G00260.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3872
Alignment location	chr20:89197..94870 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:89197..94870 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G00260.2 vs.
Match: EWM22209.1 (4-hydroxyphenylpyruvate dioxygenase [Nannochloropsis gaditana])

HSP 1 Score: 664.1 bits (1712), Expect = 3.200e-187
Identity = 335/433 (77.37%), Postives = 367/433 (84.76%), Query Frame = 0

Query:   27 HTPQPLLPFRLQIKRFHHLELYCGDASNTSRRFAWGLGLAQVAKSDHSTGNPLYASYVLQSQELVFVFTAPYA--PPSSSFPS--SSPRHAVPITNIADAPSSSSSIPHPAFSPTDAAGFFTRHGLAIKAVGIEVEDAHVAYEKCVAHGGKGVLPAQLLKDVETGQSMLMSEVMAYPEEEGEVVLRFVSGGFKGPFLPNYQSTPSPPLSYGLQRIDHVVSNVRHLLPVANHLMGMTGMHEFAEFTAADVGTVDSGLNSLVLASNNEKVLMPVNEPTFGTKRKSQIQTYLEQNQGPGVQHIALKTDDIFATMEELKRRTHVGGFDFMPKASPEYYRGLPQKIGAGVLTEEQLTRVEELGLLVDKDDQGVLLQIFTRPVGDRPTLFLEIIQRLGCTHDKAGKALAEQAPGCGGFGKGNFSELFKSIEEYEKTLNV 456
            H P   L  R ++KRFHHLE YCGDA+NTSRRF+WGLGL+QVAKSD+STGNPLYASYVLQSQELVFVFTAPYA  PPSSS  +  S P H      IA+A  S +  PHPAF  + A GFF RHGLA++A+GIEV DA  AYE C+AHGGKGVL  Q+LKD  TGQ   ++EV+AYP  + EVVLRFVSG F GPFLPNYQ TP PPLSYGLQRIDHVVSNV  LLPV NHLM MTG+HE+AEFT+ DVGTVDSGLNSLVLASNNE+VL+PVNEPTFGTKRKSQIQTYLEQNQG GVQHIALKTD+IFATM ELK+RTH+GGFDFMPKASPEYY+ LP KIG GVLT+E+L  VEELGLLVDKDDQGVLLQ+FTRPVGDRPTLFLEIIQR+GCT DK GK L EQAPGCGGFGKGNFSELFKSIEEYEKTLNV
Sbjct:   34 HNP---LSDRFEMKRFHHLEFYCGDATNTSRRFSWGLGLSQVAKSDNSTGNPLYASYVLQSQELVFVFTAPYASTPPSSSVAAALSQPSH-----RIAEASPSLAPSPHPAFDSSMAMGFFGRHGLAVRAIGIEVHDASQAYEACLAHGGKGVLAPQILKDTATGQVKWIAEVLAYPGNDAEVVLRFVSGDFDGPFLPNYQETPIPPLSYGLQRIDHVVSNVPQLLPVVNHLMEMTGLHEYAEFTSTDVGTVDSGLNSLVLASNNERVLLPVNEPTFGTKRKSQIQTYLEQNQGAGVQHIALKTDNIFATMRELKKRTHLGGFDFMPKASPEYYQSLPAKIGPGVLTDEELACVEELGLLVDKDDQGVLLQVFTRPVGDRPTLFLEIIQRVGCTVDKEGKRLPEQAPGCGGFGKGNFSELFKSIEEYEKTLNV 458

The following BLAST results are available for this feature:

BLAST of NO20G00260.2 vs.

BLAST of NO20G00260.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22209.1	3.200e-187	77.37	4-hydroxyphenylpyruvate dioxygenase [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G00260	NO20G00260	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00260.2	NO20G00260.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00260.2.cds1	NO20G00260.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds2	NO20G00260.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds3	NO20G00260.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds4	NO20G00260.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds5	NO20G00260.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds6	NO20G00260.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds7	NO20G00260.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds8	NO20G00260.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00260.2.cds9	NO20G00260.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:89197..94870-
coding sequence from alignment at chr20:89197..94870-

mRNA sequence

>NO20G00260.2 ID=NO20G00260.2|Name=NO20G00260.2|organism=Nannochloropsis oceanica|type=mRNA|length=3872bp
ATAACTTTCTGTATAGTCCCCCAAAATCTCGGATCACGGGCCACTCCCCC
ACATCCTCGACCACCACCCGTCCATCACATCCCAACCACTTATATATTCT
CTTAGGACACCATTCACATGTGACCATAACTCGAAACCGAGAAAGAGTCT
CTGGGCGGGACACAAATCTACCAGAAAAAAAACACACACACACACACACA
AACAATTGCTCAAATAAAGCAGAGGAAAAAAAACACACGTGACTATAGCC
CGAACCGATTATCTGCGCGCGCAGTCTAAAGGGGGAAAGATAAATGCTCA
AATAAGGCAGAAGAAGCAAACAGACAAACAAACAATCGACCGACAGACAC
TATCGATCCTCTCACGGGGCACACTGTCATTGAACGGCACACGGTTCTAA
GGCCCGAACAACAAGAATATGGGATGTGGAGAGTGTGGTGGGAAATGAAT
GCGAAGTTGGGATTCGCAGTTGTCGCATCAACATGATCAAATTAAATTAG
CCAACACAATGAGAAAACAATGCCCCCAGATGGGAGACTCGAAACGCCCG
GAATTGTCAAGGGAACCAAAAACGGAGGAGACAGACGAAGGACAAAGCAT
ATCATCGGGATCGTGTCGTCCACCTCCTACCATCCTTCGACTGCGATGGC
AGGACATCATCCCCGCTGGACAAGTTCCCAAAAACAATTACCCACAAAAC
ACTGACAGGCCTCGGTAGAAGCGGCATCACAAAAAGGGCCGCCCGCGGTG
AAGATCATGCTCATGTTTTGATGCGTCGTGTCGATGGAATGCGAGGATCT
AATGATGCTCCTGTGCCCAAAGTAGTCTACACTTGTAAAAAGTTCATCCA
TCGAGATCGCAACGCGACCGAATCATCTGGCATTTGGCCAGTTTCGAGGG
GTTGCAAGCAAGCTCTCACACTCCTTCCCCCAAAGGACAAAGAACAATAG
GCTAGGTATCTCAGATTATGCGAAAGACCTAGTTCTCTGAAGTATGATTA
CGACTTCATAGTACGAGTGGTTCGTTCCCGGTAGAATCGAAAGGATGGAA
TGGATGGGACAAAAGTTCGATTATTATGTTTTTGAGAAAGCTAGAGGGGA
CCACGCGGCCTCAATATATTGTCGGGGTTGGGACGGCGGTAAGCATCATC
CCGCGGTGTCGCGATACTCCTTACTTTCGTGGAGAAAGAGGCTAACTCCC
TTGAAATATGCAGTATGTCCAGACTTACATATCGAATATCGATGAGGATG
ACATAAGAATCAAGACGTCGCGGAGCGTACGGAGAACGGAGGGGGAGTAG
AGATGGAGGCAGACAGTCGCAGTTGGACTATTCCGTCCACAATCACCTGC
ACATGGAAATATGGAAATAAAAAGCGCCTTGAGCCTTTCATAGCCCGTTG
TATGAGGCAAATGAAGCTCCTCCCTGGGAGCGTAATTCCTCCTGTTCTGC
CGCCAAGTTGACGTAAAAGAACAGACATGTCAGAGTGTCACGGTCGTTCT
CAACGCAAATACTATCTGTCCCCACTCCTTGCGTGCCTAGGCGCGCACTG
CCTCTTGGTGCGCCTCATGACCTTGGGATAGGTGGGGTCTGCGGACATGC
ATGGGCACTGACGACAAAAACAAACCATCTTTCTTTCCTCCAGACACCAA
ACGCACACAGACGCCCAGCAAAGGCATTTCACACCAGTTATGCCAGGGAC
ACTGACCACCACCTCGCCAGCGATGATCAGCCAGCTTGTCGGCCACAAGA
ACTTTGTGCGGGTGAACCCCATGAGCGACCAGTTTGAGGTGAGGAAAAGC
TGAAGCGACTGAAGGGGGGCCGAATGAGGGGGTACATAGGGACGGATTGC
CGCAGCGCACCACACTCACGCTCAGATATTCTCGTCAGCGCGTTTGTCTT
GATGCACGTCGTGAGACAAATGAATTAGGTGGGAAGAGGATGCTTCACGA
TCTCACTCGACAGAGAAGTTGCACACCCCTCACCCCACTTCGTTGGAAAG
CAACACCCCTTCAGTCACACACACCCCAACCACTCCTTCCCTTCCGCTTA
CAGATCAAACGCTTTCACCATCTTGAGCTATACTGTGGCGACGCCTCCAA
CACGTCCCGTCGTTTTGCATGGGGCTTGGGCCTGGCTCAAGTGGCCAAAT
CGGACCATTCAACCGGCAATCCGCTCTACGCCTCCTACGTCCTTCAGAGC
CAAGAACTCGTCTTTGTCTTCACAGCGCCTTATGCACCTCCTTCTTCCTC
CTTCCCTTCCTCCTCTCCGCGACATGCCGTGCCCATCACCAATATTGCCG
ATGCCCCCTCCTCCTCCTCCTCCATCCCTCACCCTGCTTTCTCCCCTACC
GACGCCGCCGGTTTCTTTACTCGCCATGGGCTGGCCATTAAAGCGGTCGG
AATTGAGGTAGAGGATGCCCACGTAGCTTACGAAAAGTGTGTGGCGCATG
GAGGGAAGGGTGTGCTGCCTGCACAGCTGCTGAAGGACGTGGAAACAGGG
CAGTCAATGCTGATGTCGGAGGTCATGGCATATCCCGAGGAGGAAGGGGA
GGTGGTGCTGCGCTTTGTGAGCGGGGGGTTCAAAGGCCCCTTCCTGCCCA
ACTACCAATCCACGCCGTCCCCGCCTCTTTCTTACGGGCTGCAGCGAATC
GACCACGTCGTTTCGAACGTGCGGCATCTGCTGCCGGTTGCTAATCACTT
GATGGGCATGACGGGGATGCATGAATTCGCGGAGTTTACGGCCGCGGACG
TGGGCACCGTCGACAGCGGCTTGAACAGCCTCGTGCTGGCGTCTAACAAC
GAGAAGGTCTTAATGCCCGTCAATGAACCTACCTTTGGCACTAAGCGCAA
GAGTCAGATCCAAACCTACCTAGAGCAAAATCAGGGGCCAGGGGTCCAAC
ACATCGCGCTCAAGACAGACGATATTTTCGCCACCATGGAGGAGCTGAAA
AGAAGGACGCACGTAGGAGGCTTCGACTTCATGCCCAAGGCCTCTCCCGA
GTATTATCGTGGCCTTCCTCAGAAGATAGGCGCTGGAGTGTTGACTGAAG
AGCAGCTGACGCGGGTGGAGGAGCTGGGGCTGCTGGTGGACAAAGATGAT
CAGGGGGTTTTGCTGCAGATCTTCACCCGCCCCGTCGGAGATCGGCCCAC
CCTGTTCCTCGAAATCATCCAACGCCTCGGCTGCACGCACGACAAGGCGG
GAAAGGCACTTGCGGAGCAGGCCCCGGGATGTGGGGGGTTTGGAAAGGGA
AATTTCAGCGAGCTGTTCAAGTCGATCGAGGAGTATGAGAAAACGCTTAA
TGTATAGAACGTATTCCATCTGGGGAGAAGAAGGGGAGGGAGGGAAAGGG
AGAGGGAAGGGAAATGGCAGGGAGGGAGGGTGAGAAAAGAGGAATGATGA
CTGCAGGAGAGAGAGGCTGGGTGTGGAGGAGGGAAGGAGGGATGAATGGA
GGGAAGGGGGGAGGAGGAGATGGTCGGACGGGTACGCGGACGAGGCCCGT
ACCAGGAGAAGAGGGAAAGCGGGATAAATATGTGCTGGGGATGGTAGGAA
GGACCAGGGCAAGCTGATAGATACAAGGGCAGGAACAACATCATGTACAG
GAGCAGCAGCAGCAGGAAGAGGAGGAAGAGGAGGAGGACCACAAAGAGGA
GTAGCATTGCCAGCAGCACTAGACCAGTGGTGGGAAAAGCGGACGGTTGT
ATAAAAATGAAGTTTAAAATAGGAAGAATGTCGCAGAGGGTGATGAATTA
AACGGATGAGGAAGGGGAGTTGGATTGTAGTCCGAGCCCGCACGTCATGT
GTTTCTGTTACAGGCAGAATGAGAAAAAAAAGAGTTAAAAAAGATGTATG
CACGTATGGATGTCTGCATCTG

protein sequence of NO20G00260.2

>NO20G00260.2-protein ID=NO20G00260.2-protein|Name=NO20G00260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=456bp
MLHDLTRQRSCTPLTPLRWKATPLQSHTPQPLLPFRLQIKRFHHLELYCG
DASNTSRRFAWGLGLAQVAKSDHSTGNPLYASYVLQSQELVFVFTAPYAP
PSSSFPSSSPRHAVPITNIADAPSSSSSIPHPAFSPTDAAGFFTRHGLAI
KAVGIEVEDAHVAYEKCVAHGGKGVLPAQLLKDVETGQSMLMSEVMAYPE
EEGEVVLRFVSGGFKGPFLPNYQSTPSPPLSYGLQRIDHVVSNVRHLLPV
ANHLMGMTGMHEFAEFTAADVGTVDSGLNSLVLASNNEKVLMPVNEPTFG
TKRKSQIQTYLEQNQGPGVQHIALKTDDIFATMEELKRRTHVGGFDFMPK
ASPEYYRGLPQKIGAGVLTEEQLTRVEELGLLVDKDDQGVLLQIFTRPVG
DRPTLFLEIIQRLGCTHDKAGKALAEQAPGCGGFGKGNFSELFKSIEEYE
KTLNV*

mRNA from alignment at chr20:89197..94870-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G00260.2 ID=NO20G00260.2|Name=NO20G00260.2|organism=Nannochloropsis oceanica|type=mRNA|length=5674bp|location=Sequence derived from alignment at chr20:89197..94870- (Nannochloropsis oceanica)
ATAACTTTCTGTATAGTCCCCCAAAATCTCGGATCACGGGCCACTCCCCC
ACATCCTCGACCACCACCCGTCCATCACATCCCAACCACTTATATATTCT
CTTAGGACACCATTCACATGTGACCATAACTCGAAACCGAGAAAGAGTCT
CTGGGCGGGACACAAATCTACCAGAAAAAAAACACACACACACACACACA
AACAATTGCTCAAATAAAGCAGAGGAAAAAAAACACACGTGACTATAGCC
CGAACCGATTATCTGCGCGCGCAGTCTAAAGGGGGAAAGATAAATGCTCA
AATAAGGCAGAAGAAGCAAACAGACAAACAAACAATCGACCGACAGACAC
TATCGATCCTCTCACGGGGCACACTGTCATTGAACGGCACACGGTTCTAA
GGCCCGAACAACAAGAATATGGGATGTGGAGAGTGTGGTGGGAAATGAAT
GCGAAGTTGGGATTCGCAGTTGTCGCATCAACATGATCAAATTAAATTAG
CCAACACAATGAGAAAACAATGCCCCCAGATGGGAGACTCGAAACGCCCG
GAATTGTCAAGGGAACCAAAAACGGAGGAGACAGACGAAGGACAAAGCAT
ATCATCGGGATCGTGTCGTCCACCTCCTACCATCCTTCGACTGCGATGGC
AGGACATCATCCCCGCTGGACAAGTTCCCAAAAACAATTACCCACAAAAC
ACTGACAGGCCTCGGTAGAAGCGGCATCACAAAAAGGGCCGCCCGCGGTG
AAGATCATGCTCATGTTTTGATGCGTCGTGTCGATGGAATGCGAGGATCT
AATGATGCTCCTGTGCCCAAAGTAGTCTACACTTGTAAAAAGTTCATCCA
TCGAGATCGCAACGCGACCGAATCATCTGGCATTTGGCCAGTTTCGAGGG
GTTGCAAGCAAGCTCTCACACTCCTTCCCCCAAAGGACAAAGAACAATAG
GCTAGGTATCTCAGATTATGCGAAAGACCTAGTTCTCTGAAGTATGATTA
CGACTTCATAGTACGAGTGGTTCGTTCCCGGTAGAATCGAAAGGATGGAA
TGGATGGGACAAAAGTTCGATTATTATGTTTTTGAGAAAGCTAGAGGGGA
CCACGCGGCCTCAATATATTGTCGGGGTTGGGACGGCGGTAAGCATCATC
CCGCGGTGTCGCGATACTCCTTACTTTCGTGGAGAAAGAGGCTAACTCCC
TTGAAATATGCAGTATGTCCAGACTTACATATCGAATATCGATGAGGATG
ACATAAGAATCAAGACGTCGCGGAGCGTACGGAGAACGGAGGGGGAGTAG
AGATGGAGGCAGACAGTCGCAGTTGGACTATTCCGTCCACAATCACCTGC
ACATGGAAATATGGAAATAAAAAGCGCCTTGAGCCTTTCATAGCCCGTTG
TATGAGGCAAATGAAGCTCCTCCCTGGGAGCGTAATTCCTCCTGTTCTGC
CGCCAAGTTGACGTAAAAGAACAGACATGTCAGAGTGTCACGGTCGTTCT
CAACGCAAATACTATCTGTCCCCACTCCTTGCGTGCCTAGGCGCGCACTG
CCTCTTGGTGCGCCTCATGACCTTGGGATAGGTGGGGTCTGCGGACATGC
ATGGGCACTGACGACAAAAACAAACCATCTTTCTTTCCTCCAGACACCAA
ACGCACACAGACGCCCAGCAAAGGCATTTCACACCAGTTATGCCAGGGAC
ACTGACCACCACCTCGCCAGCGATGATCAGCCAGCTTGTCGGCCACAAGA
ACTTTGTGCGGGTGAACCCCATGAGCGACCAGTTTGAGGTGAGGAAAAGC
TGAAGCGACTGAAGGGGGGCCGAATGAGGGGGTACATAGGGACGGATTGC
CGCAGCGCACCACACTCACGCTCAGATATTCTCGTCAGCGCGTTTGTCTT
GATGCACGTCGTGAGACAAATGAATTAGGTGGGAAGAGGATGCTTCACGA
TCTCACTCGACAGAGAAGTTGCACACCCCTCACCCCACTTCGTTGGAAAG
CAACACCCCTTCAGTCACACACACCCCAACCACTCCTTCCCTTCCGCTTA
CAGATCAAACGCTTTCACCATCTTGAGCTATACTGTGGCGACGCCTCCAA
CACGTCCCGTCGTTTTGCATGGGGCTTGGGCCTGGCTCAAGTGGCCAAAT
CGGACCATTCAACCGGCAATCCGCTCTACGCCTCCTACGTCCTTCAGAGC
CAAGAACTCGTCTTTGTCTTCACAGCGCCTTATGCACCTCCTTCTTCCTC
CTTCCCTTCCTCCTCTCCGCGACATGCCGTGCCCATCACCAATATTGCCG
ATGCCCCCTCCTCCTCCTCCTCCATCCCTCACCCTGCTTTCTCCCCTACC
GACGCCGCCGGTTTCTTTACTCGCCATGGGCTGGCCATTAAAGCGGTCGG
AATTGAGGTAGAGGATGCCCACGTAGCTTACGAAAAGTGTGTGGCGCATG
GAGGGAAGGGTGTGCTGCCTGCACAGGTAGGGGAGGGATGGAGGGAGGGA
GGGAGGAAGGGAGGGGGGGGGGTAGGATGTGTGAGAAGGTTTCGCAGTGT
ACGAACGACAAGTGTGTGGCATGGAGAAAAGGGTGTGTGCTGGCTTCGCA
GGTAGGGAAGGGAAGATGATTGTATTTGCTCCTTCGTCCCTCACCCTTAC
CTACCTTCCTTCCCTTCCTAGCTGCTGAAGGACGTGGAAACAGGGCAGTC
AATGCTGATGTCGGAGGTCATGGCATATCCCGAGGAGGAAGGGGAGGTGG
TGCTGCGCTTTGTGAGCGGGGGGTTCAAAGGTGAGGGAGGGAGGGAGGGA
GGGAGGGAAGGAGGAATGGTGTATTCGTTTGGATCGCAATGGACACGCCC
CCCCACCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGCC
CCTTCCTGCCCAACTACCAATCCACGCCGTCCCCGCCTCTTTCTTACGGG
CTGCAGCGAATCGACCACGTCGTTTCGAACGTGCGGCATCTGCTGCCGGT
TGCTAATCACTTGATGGGCATGACGGTGAGACCCCCCCCCTCCCTCCCTC
CCTCCCTCCCTCTCATGATGATGATTATGATATCTTGGTGTTGGATGTGC
TCCAACTGCTGCCAGTCGTTATTCACTTGATGGATGCTACGGACGGAGGG
AGGGAGGGAGGGAGGGAGGGGGGGCGATAGGCGGACGGAGAGAGGAAGGC
AGGGAGGGAGGGAGGGAGGGAGGGCGATGGGCTACAACCCTATCTCTTCC
ATCGATGTCCTTCAACCTCAGCTCACTCCCTCATCATCCCTTCCTCCCTC
CCTTCCTCCATCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCC
TCCCTTCCTCCCGCCCTTGCAGGGGATGCATGAATTCGCGGAGTTTACGG
CCGCGGACGTGGGCACCGTCGACAGCGGCTTGAACAGCCTCGTGCTGGCG
TCTAACAACGAGAAGGTCTTAATGCCCGTCAATGAACCTACCTTTGGCAC
TAAGCGCAAGAGTCAGGTGAGTACGCCCCTCCACCCCCCCCTCTTCCCCT
GTCTTTCCGTTCTCTCCCCTCCCACTCCCTCCTCTTTCCCTCTCTTCCTC
CCTTCCACCCTCCTTCCCTTCCTCAATCCCCCCTCCCTCCCTCCCTCAGA
TCCAAACCTACCTAGAGCAAAATCAGGGGCCAGGGGTCCAACACATCGCG
CTCAAGACAGACGATATTTTCGCCACCATGGAGGAGCTGAAAAGAAGGAC
GCACGTAGGAGGTAAGTACCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCC
TCCCTCCCGCCCTCCCTCCCTGCTTCCTTGCTTTTGGCCCCCTCGTCCTC
CCGTTTCGTCTCTCTCCCTCTCTCTCTTCCTTCTCCACCTCTATATAATT
CATCCACCCTGCCCCTCCTTCTCCCTTCTTTCCCCTCACCTTTCTCCCTC
CCTCGTAGCTTCCTTTTGTGCCGCCTTCCCACGTTATTTGCTTCCCTTTC
TCCCATTCCTCTTCTTGTCCAAGTTCGACGCTTGCTCCCTTCACATCTCT
CTCTCCCTCCCTCCCTCTTTTTAGGCTTCGACTTCATGCCCAAGGCCTCT
CCCGAGTATTATCGTGGCCTTCCTCAGAAGATAGGCGCTGGAGTGTTGAC
TGGTAAGGGTCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATTGAA
GAAAGAGAGGGAGGGAGGGAGGGGGGGATTGAAGGGAGAGAGGGAAGGAG
TGAAGGAGGGAGTGAGGGGGAGGGAGGGAGGGAGGGAGGGAAGGAGAGAG
GGAGGGAGGAGAGAGGAGCATGACGTTTGCAGGGGCGTTAACCGTTTTTG
TTCCAAATATTTAATTCAAAAGTTTCTCGTCTGTCTCCCGCTTTCCCCCA
CCTCTATCCCTCATGCTTCATTTATGCTTGTCTCTTTATTCGATTTTTCG
TATTTTTTAGCTCAGCTATCCCTCTTCCTCATTACCTTACCCTTCTGCCC
TCCTCACGGATCGCGATAGAAGAGCAGCTGACGCGGGTGGAGGAGCTGGG
GCTGCTGGTGGACAAAGATGATCAGGGGGTTTTGCTGCAGGCACGTGCCC
TCACCGCACAACACTCCTCCCTCCTTCTCTCCCTCTTTCCCTCCTTCCCT
CCCTTCTTGTTCTCTTTTCCTTCCTTCCGTCATTATTAAAACGTCAAGAG
AAGCCATGCTTATCATCTATCCCTCCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAAGATCTTCACCCGC
CCCGTCGGAGATCGGCCCACCCTGTTCCTCGAAATCATCCAACGCCTCGG
CTGCACGCACGACAAGGCGGGAAAGGCACTTGCGGAGCAGGCCCCGGGAT
GTGGGGGGTTTGGAAAGGTAGGGGAGGGAGGGAGGGAGGAAGGGAGGAAG
GAGTGAGGAAGGGAGGGGGGGAGGTCATCCACATTGAAGACACTCACATG
TTTTCCAACCATGCTTCATTCCCGCCTTTCGTTCCCCCCCTTCCTAAAGG
GAAATTTCAGCGAGCTGTTCAAGTCGATCGAGGAGTATGAGAAAACGCTT
AATGTATAGAACGTATTCCATCTGGGGAGAAGAAGGGGAGGGAGGGAAAG
GGAGAGGGAAGGGAAATGGCAGGGAGGGAGGGTGAGAAAAGAGGAATGAT
GACTGCAGGAGAGAGAGGCTGGGTGTGGAGGAGGGAAGGAGGGATGAATG
GAGGGAAGGGGGGAGGAGGAGATGGTCGGACGGGTACGCGGACGAGGCCC
GTACCAGGAGAAGAGGGAAAGCGGGATAAATATGTGCTGGGGATGGTAGG
AAGGACCAGGGCAAGCTGATAGATACAAGGGCAGGAACAACATCATGTAC
AGGAGCAGCAGCAGCAGGAAGAGGAGGAAGAGGAGGAGGACCACAAAGAG
GAGTAGCATTGCCAGCAGCACTAGACCAGTGGTGGGAAAAGCGGACGGTT
GTATAAAAATGAAGTTTAAAATAGGAAGAATGTCGCAGAGGGTGATGAAT
TAAACGGATGAGGAAGGGGAGTTGGATTGTAGTCCGAGCCCGCACGTCAT
GTGTTTCTGTTACAGGCAGAATGAGAAAAAAAAGAGTTAAAAAAGATGTA
TGCACGTATGGATGTCTGCATCTG

Coding sequence (CDS) from alignment at chr20:89197..94870-

>NO20G00260.2 ID=NO20G00260.2|Name=NO20G00260.2|organism=Nannochloropsis oceanica|type=CDS|length=1368bp|location=Sequence derived from alignment at chr20:89197..94870- (Nannochloropsis oceanica)
ATGCTTCACGATCTCACTCGACAGAGAAGTTGCACACCCCTCACCCCACT
TCGTTGGAAAGCAACACCCCTTCAGTCACACACACCCCAACCACTCCTTC
CCTTCCGCTTACAGATCAAACGCTTTCACCATCTTGAGCTATACTGTGGC
GACGCCTCCAACACGTCCCGTCGTTTTGCATGGGGCTTGGGCCTGGCTCA
AGTGGCCAAATCGGACCATTCAACCGGCAATCCGCTCTACGCCTCCTACG
TCCTTCAGAGCCAAGAACTCGTCTTTGTCTTCACAGCGCCTTATGCACCT
CCTTCTTCCTCCTTCCCTTCCTCCTCTCCGCGACATGCCGTGCCCATCAC
CAATATTGCCGATGCCCCCTCCTCCTCCTCCTCCATCCCTCACCCTGCTT
TCTCCCCTACCGACGCCGCCGGTTTCTTTACTCGCCATGGGCTGGCCATT
AAAGCGGTCGGAATTGAGGTAGAGGATGCCCACGTAGCTTACGAAAAGTG
TGTGGCGCATGGAGGGAAGGGTGTGCTGCCTGCACAGCTGCTGAAGGACG
TGGAAACAGGGCAGTCAATGCTGATGTCGGAGGTCATGGCATATCCCGAG
GAGGAAGGGGAGGTGGTGCTGCGCTTTGTGAGCGGGGGGTTCAAAGGCCC
CTTCCTGCCCAACTACCAATCCACGCCGTCCCCGCCTCTTTCTTACGGGC
TGCAGCGAATCGACCACGTCGTTTCGAACGTGCGGCATCTGCTGCCGGTT
GCTAATCACTTGATGGGCATGACGGGGATGCATGAATTCGCGGAGTTTAC
GGCCGCGGACGTGGGCACCGTCGACAGCGGCTTGAACAGCCTCGTGCTGG
CGTCTAACAACGAGAAGGTCTTAATGCCCGTCAATGAACCTACCTTTGGC
ACTAAGCGCAAGAGTCAGATCCAAACCTACCTAGAGCAAAATCAGGGGCC
AGGGGTCCAACACATCGCGCTCAAGACAGACGATATTTTCGCCACCATGG
AGGAGCTGAAAAGAAGGACGCACGTAGGAGGCTTCGACTTCATGCCCAAG
GCCTCTCCCGAGTATTATCGTGGCCTTCCTCAGAAGATAGGCGCTGGAGT
GTTGACTGAAGAGCAGCTGACGCGGGTGGAGGAGCTGGGGCTGCTGGTGG
ACAAAGATGATCAGGGGGTTTTGCTGCAGATCTTCACCCGCCCCGTCGGA
GATCGGCCCACCCTGTTCCTCGAAATCATCCAACGCCTCGGCTGCACGCA
CGACAAGGCGGGAAAGGCACTTGCGGAGCAGGCCCCGGGATGTGGGGGGT
TTGGAAAGGGAAATTTCAGCGAGCTGTTCAAGTCGATCGAGGAGTATGAG
AAAACGCTTAATGTATAG

Synonyms

Publications