NO20G00250.2, NO20G00250.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00250.2
Unique Name	NO20G00250.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3237
Alignment location	chr20:83290..89098 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:83290..89098 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G00250.2 vs.
Match: EWM21595.1 (abc transporter [Nannochloropsis gaditana])

HSP 1 Score: 471.1 bits (1211), Expect = 5.300e-129
Identity = 259/537 (48.23%), Postives = 343/537 (63.87%), Query Frame = 0

Query:   78 IKSVGLAWRGVSLSIPLKGKNNKGKTKEILKNISGTAPAGHVTAIMGPTGSGKSSLLNALAGRVSFIKGAKLEGELLVNGAPVAYGVVRRLCAYVVQDDVLYSFLTVHETLTLATHFYLPDSLSDGAKAAYVRDVINALGLAKAANTIIGDARVRGVSGGERKRVSVGVELICNPSLLFLDEPTSGLDSFQAQSVMSAMGSLARSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIVYSGKAREAVAYFSSQGLTCPPQFCPSDFFLDVISMDYRSPTLEKATRSRIEHLDRTWHE------RQAGEGGGEGGVLQAVGAGAGAMEIKGEE-IEKGYQSSWARQFWMLLLRGLKQNRRNKFALVVKILSNAFFALILGAIYSKREGSTPGQTSIQNFVGALFFVAINQAFGNLQSVIQVFPLEKYIVQKERAAKAYHLSAYYFAKLLSELPFTLLGPLIFSSIAYWLVGLQPSLSPFLTFVCFCLLEATCAVSLGLVISAVAPDVPTATALSPAITIVFLLFSGVFINVKSLPTGAQW 608
            + +V ++W+ ++L +   G       K +L ++SG   +G +TAIMGPTGSGKSSLL  LAGRV+  KGA L G LL NG        +++  +V QDD+L+  LTV ETLTLA HF L  S +   KA+ V  VIN +GL K  +TIIGD R RGVSGGERKRVS+GVELI NP++L LDEPTSGLD+ QA +VM+A+  LA++ RT+VA IHQPRSSIF +LD+LVL+SEGR +Y G A++A  +F++QG  CPP F  +D FLD ISMDYR+  LE ATR RI HL  TWH         +G G   G     V  G    ++     I    +  W    + L  R  K   RN FA++++I+ N  FALI   I+     +   QT IQ+FVG +F V++N AF N Q+VI  FP+EK IVQKE+A+ AY LSAYY +K  SELP  L+GP IF S+ +W++    +L+ +  F+    L +  AV LG++IS +AP+   ATALSP   + FL+FSGV IN+ SLP GA+W
Sbjct:  703 VAAVNVSWQNITLKV---GARKGHAPKIVLNDVSGEVRSGALTAIMGPTGSGKSSLLMVLAGRVAQTKGATLTGTLLTNGICRDAAAFKKIATFVTQDDLLFGHLTVKETLTLAAHFALGSSKNPAQKASLVTSVINDMGLGKTVHTIIGDERARGVSGGERKRVSIGVELISNPAVLLLDEPTSGLDAHQANAVMAALKKLAQAKRTIVAVIHQPRSSIFAMLDVLVLISEGRTIYLGPAKDASRHFATQGFPCPPHFNAADLFLDKISMDYRTEALEAATRQRIAHLADTWHRHPYPDVNDSGAGSSTGSAAPPVPRGPSCRDLAAAAMISPQERGGWLNNLYYLTWRASKSAYRNTFAMILRIMLNVMFALIFSGIWHDVSNT---QTGIQSFVGIIFMVSVNVAFSNTQAVITTFPVEKGIVQKEQASSAYSLSAYYLSKFFSELPLNLVGPAIFISMVFWIINFDHTLANYGVFLATTCLASLSAVGLGILISTLAPNTEVATALSPVFNVFFLIFSGVLINIDSLPAGARW 1233

The following BLAST results are available for this feature:

BLAST of NO20G00250.2 vs.

BLAST of NO20G00250.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21595.1	5.300e-129	48.23	abc transporter [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G00250	NO20G00250	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00250.2	NO20G00250.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00250.2.cds1	NO20G00250.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds2	NO20G00250.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds3	NO20G00250.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds4	NO20G00250.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds5	NO20G00250.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds6	NO20G00250.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds7	NO20G00250.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds8	NO20G00250.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds9	NO20G00250.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds10	NO20G00250.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds11	NO20G00250.2.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds12	NO20G00250.2.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds13	NO20G00250.2.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds14	NO20G00250.2.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00250.2.cds15	NO20G00250.2.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:83290..89098-
coding sequence from alignment at chr20:83290..89098-

mRNA sequence

>NO20G00250.2 ID=NO20G00250.2|Name=NO20G00250.2|organism=Nannochloropsis oceanica|type=mRNA|length=3237bp
ATGGGCCAGGTGCCACGTACCCCGGCGATGACGGCACGAGGACAAACCAT
CTCGGACATATTAAAACAATCCAGAAAGACAGCCTCGTCCGAAACGCGCA
GCAGCTACAGCTACAAACCCACACGATACATGGAGCACAAGGAGGATGGC
GGCGACCTGGAGCAACCGCTGCTTCACAAAGGATTTGATACTGCTGCGGA
GACGGCAGGCCACCAATTGGCTTTGAAGCCGATCAAATCCGTCGGGCTCG
CCTGGAGAGGGGTCTCGCTCTCCATTCCCTTAAAGGGAAAGAATAACAAG
GGCAAGACCAAGGAGATCCTCAAGAACATTTCTGGCACCGCGCCTGCTGG
GCATGTGACTGCTATTATGGGGCCCACCGGCTCGGGTAAGTCCTCACTTC
TGAATGCTTTGGCCGGCCGAGTCAGCTTCATTAAGGGCGCCAAACTGGAG
GGAGAGCTGCTAGTCAATGGTGCGCCGGTTGCGTATGGCGTGGTGCGGAG
GCTGTGTGCCTACGTCGTGCAGGACGACGTACTCTACTCCTTCTTGACCG
TGCATGAAACCTTGACGCTGGCGACGCACTTCTACCTCCCTGACTCTCTC
TCGGATGGAGCGAAGGCGGCGTACGTCCGTGACGTTATCAATGCGCTGGG
TCTGGCCAAAGCCGCCAACACCATCATAGGCGACGCGCGTGTCAGGGGCG
TGAGCGGGGGGGAGCGGAAGCGGGTGTCGGTGGGGGTGGAGCTCATTTGC
AACCCCTCCTTGCTTTTCCTCGATGAACCTACCTCGGGCCTGGACTCCTT
CCAAGCACAGAGTGTGATGAGTGCCATGGGATCCCTTGCCCGGAGCGGCC
GGACCGTCGTGGCAGCCATTCACCAACCCCGTTCCTCCATTTTCGATCTG
TTGGATATGCTGGTGCTTGTCTCGGAGGGCAGGATCGTCTATTCCGGCAA
GGCACGGGAAGCAGTGGCTTATTTCTCTTCCCAAGGACTCACTTGCCCTC
CACAATTTTGCCCCAGCGACTTCTTCTTGGATGTCATCTCCATGGACTAC
CGCTCGCCCACCCTCGAAAAAGCGACCCGGAGTCGTATTGAGCACTTGGA
CAGGACCTGGCACGAGAGGCAGGCAGGGGAGGGAGGGGGGGAGGGAGGGG
TGCTGCAGGCGGTGGGAGCGGGAGCGGGAGCGATGGAGATAAAAGGCGAG
GAAATTGAAAAGGGCTACCAGTCGTCGTGGGCCCGGCAGTTCTGGATGCT
CCTCCTTCGCGGGCTGAAGCAAAATCGGCGGAACAAATTTGCGTTGGTGG
TGAAGATCCTGAGCAATGCGTTCTTTGCTTTAATCTTGGGAGCGATCTAC
TCGAAGAGGGAGGGGTCGACCCCGGGCCAAACGTCTATTCAAAACTTTGT
CGGGGCCCTCTTCTTCGTCGCCATCAACCAAGCCTTTGGCAACCTTCAAT
CCGTCATCCAGGTCTTTCCCTTGGAGAAGTACATCGTCCAGAAAGAGCGT
GCCGCGAAAGCCTACCATCTCTCCGCCTACTACTTTGCCAAGCTCCTTTC
CGAACTGCCCTTTACCCTCCTAGGGCCCCTCATCTTCTCGAGCATCGCCT
ACTGGCTCGTGGGGCTTCAACCTTCCCTCTCCCCCTTCCTCACCTTCGTC
TGTTTTTGCCTCTTGGAAGCAACTTGTGCTGTCTCCCTCGGCCTGGTCAT
CAGCGCAGTGGCCCCCGATGTACCAACAGCCACGGCGCTCTCTCCCGCCA
TCACGATCGTGTTCTTGCTCTTCTCAGGCGTGTTTATCAATGTGAAAAGT
TTGCCAACAGGGGCGCAGTGGTAGGATGAGTGGGAAGGGAGGGAGAGGGG
AGAGAGGGAGGGAGGGAATGGGGCATGAAGCGTACGTGTGACGCCGTCGG
AGCCCATGGTGGAAGTCTATCCTTACCCAACACTCTTACCACCACGTCCC
TCCCTCCCTCCTCCCGTCCCTCCTAAAGGTGCCCCTACATGTCTTTCATC
AAGTGGAGCTTCAATGCGTATGCCCAAAACCAGTTCAAGGGCATGACTTT
CTCCTGCCCCGACGCCGAGGGCAAGGGCTGCCTGACGACAGGCGAGGAGA
TCCTGGCCCTGTACTCGATGGACGAATACGAGGTGTGGCAGTGCGGCTTG
GCCTTGCTGGGAATCACCACCATTTTCTCCATTTTGGGCTACATTATCTT
GAGGATGAATAGCCGAAAGTATATGAAGATGGTCGGGCCTTCATCTGCTT
CCTCCGGTGCGTCTGCCGTTCCCTTTTTCTCTTCTTCCGCAGCGCTGAAT
GGTGAGAGAGAGGTAGTGTAAAGAAGCGTGAACGAAGACTTGGCGCCTAA
CATATAGCCGTGTGTTTCTTGTGCAGGGGCGAGGGCACACACACACAAAA
AAGATTCAAAAAAGATTCAAGAAGAGGGGAGATTCAAGATTTTGGGGAGC
AGGAGGGGAGAAAAGAGAGAAGGGAGAAAGGGTAAGGATGCTTCAAGAAT
TCAAAATAAAATATAAAATTACGAACGTGCGTGCATGTATGTGTATATAT
TGGCATACAAATGCGACGAGCGTTGTGATACTACGATGAGATATAAGAAC
AATAAGAAAGAGTACTGATAATAGGTATAAAGCGTCGAGGAACAGGCGTG
GTGCAGCGTCTTGGCCTTGGCCTGTCTTTGCTCTTTGATTACAAACCTGA
AAGCATAGTCACAAAGTATACAAAACAGAACAAAGGTGAGAAATGATTGA
AGAAATATTCTCGTCAGTTTAAACAAAGCCGGTGTTTGGGCGTTCAATCT
CTTGTCAATAGTGACCCTCATAAAGGCGAGACGAGACGACAGAATCATGC
ACCGTGTTGGAGAAGGTCAAACCGCTAATAATGAAGCGAGGCAGCAGGGA
GGAGGAGTACTGCGGTTCCCTTAAAATAGAACTAGAATGATGACATAACA
AATGTGTCTTCCTGGCATTTTTTTCTTTTAAACTTCTTCCACAACCTTTC
ATTCAAATGATCTCTCACTTGTATATCATCCATCCGCCCTAGTTGTAGAT
TTTGCGTGTGATACTACGATACCTTCCAAACCCTTAGTGCGAAGATACAT
GTAGATCAGTGGACGTGCATTTGGGTGATGTTGGCGAAGTGAGTAAGCCC
TGAGAATACGACAGACCATGTATCTAAAAACAAAAAGCTCTATTACTATA
TATGTGTGTGTATATATATATATACATACATATACAT

protein sequence of NO20G00250.2

>NO20G00250.2-protein ID=NO20G00250.2-protein|Name=NO20G00250.2|organism=Nannochloropsis oceanica|type=polypeptide|length=608bp
MGQVPRTPAMTARGQTISDILKQSRKTASSETRSSYSYKPTRYMEHKEDG
GDLEQPLLHKGFDTAAETAGHQLALKPIKSVGLAWRGVSLSIPLKGKNNK
GKTKEILKNISGTAPAGHVTAIMGPTGSGKSSLLNALAGRVSFIKGAKLE
GELLVNGAPVAYGVVRRLCAYVVQDDVLYSFLTVHETLTLATHFYLPDSL
SDGAKAAYVRDVINALGLAKAANTIIGDARVRGVSGGERKRVSVGVELIC
NPSLLFLDEPTSGLDSFQAQSVMSAMGSLARSGRTVVAAIHQPRSSIFDL
LDMLVLVSEGRIVYSGKAREAVAYFSSQGLTCPPQFCPSDFFLDVISMDY
RSPTLEKATRSRIEHLDRTWHERQAGEGGGEGGVLQAVGAGAGAMEIKGE
EIEKGYQSSWARQFWMLLLRGLKQNRRNKFALVVKILSNAFFALILGAIY
SKREGSTPGQTSIQNFVGALFFVAINQAFGNLQSVIQVFPLEKYIVQKER
AAKAYHLSAYYFAKLLSELPFTLLGPLIFSSIAYWLVGLQPSLSPFLTFV
CFCLLEATCAVSLGLVISAVAPDVPTATALSPAITIVFLLFSGVFINVKS
LPTGAQW*

mRNA from alignment at chr20:83290..89098-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G00250.2 ID=NO20G00250.2|Name=NO20G00250.2|organism=Nannochloropsis oceanica|type=mRNA|length=5809bp|location=Sequence derived from alignment at chr20:83290..89098- (Nannochloropsis oceanica)
ATGGGCCAGGTGCCACGTACCCCGGCGATGACGGTAATAATTCTGGGCAA
ACAGACGGGGCAATACAGCATGCACCAGAAGCCCACGTAAAGCATGGATC
AGCAACACCATGCAAGTTTAGTGGGCATGAGGCGGCCTGCTTGACACCCA
GTTATTGAGAAATGCGGGCAATATCTCGCAAGACCATGTATATGTTCATC
CCTCCTCACACTCCCATTCCAACCCGCAGGCACGAGGACAAACCATCTCG
GACATATTAAAACAATCCAGAAAGACAGCCTCGTCCGAAACGCGCAGCAG
CTACAGCTACAAACCCACACGATACATGGAGCACAAGGAGGATGGCGGCG
ACCTGGAGCAACCGCTGCTTCACAAAGGATTTGGTGCGTTCAGACAGAGG
AGGGAGGGAGGCAGATGGAGAGGTTGCAAGAAGGAGCAACGTTAGATCTC
ACACGCATACCTCTTTATCTCTTCGCCCCTTCAATATCGTAGATACTGCT
GCGGAGACGGCAGGCCACCAATTGGCTTTGAAGCCGATCAAATCCGTCGG
GCTCGCCTGGAGAGGGGGTAAGTGAGCCCCATGGCAAGGGAATGAAGGAG
GGAGGAGGAAGGACGAGGGCTGGACGGAGAGGAGAGCGACGAGATGCCCA
CGAGGTGGCATTTGATGGGAGAGGATATGTTTGTCCTTCTTGATCCTTGA
AACAAATTGTGCTCTCTTGCGCATCAGAGGAGCGTGCTAAGCCCCCCCTT
TCCCCCTCTGGCCCCTCCACTTTTTCCCTCCTTCTTCGTCCACGCCATAG
TCTCGCTCTCCATTCCCTTAAAGGGAAAGAATAACAAGGGCAAGACCAAG
GAGATCCTCAAGAACATTTCTGGCACCGCGCCTGCTGGGCATGTGACTGC
TATTATGGGGCCCACCGGTAATGGAAAGGGAGGAAGGGAGGGAAGGAGGA
AGAGAAGGAAGAAGAGGGTGAGGATGTGGCCCCGGTGTGAACACATTGTT
TTCCGTTTGTTATCATAGTTGTTTCAGTTGATTTTTATTCATAATGATCA
ACCACTTCCTTCTCACGACCCCTTCCGTCCCTGTTTCCCTCCCTCGCTCC
CTTGGTCCCTCCCTCCCTCCCTCCCTCCTTTCAGGCTCGGGTAAGTCCTC
ACTTCTGAATGCTTTGGCCGGCCGAGTCAGCTTCATTAAGGGCGCCAAAC
TGGAGGGAGAGCTGCTAGTCAATGGTGCGCCGGTTGCGTATGGCGTGGTG
CGGAGGCTGTGTGCCTACGTCGTGCAGGTAGGGAGGGAGGGAGGGCAGGA
GGAGGGGAGGGACGGAAGGGGGGGAAGGACGGAGGGCATATGTAGCTCAT
CCTCTATACTTCCCTCTTTCCCTCTTTCCCTTGCTGTTCGCGCCAAGACA
GTATGCTCTGCTCCGTCCTGGCCGTTCAAGAATCATCAACGCTGGCCGTC
CATTATCTCATCCGTCTCCCCCCCCTCCCCTCCCTCCCTCCCTCCCTCCG
TCCCCAGGACGACGTACTCTACTCCTTCTTGACCGTGCATGAAACCTTGA
CGCTGGCGACGCACTTCTACCTCCCTGACTCTCTCTCGGATGGAGCGAAG
GCGGCGTACGTCCGTGACGTTATCAATGCGCTGGGTCTGGCCAAAGCCGC
CAACACCATCATAGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGA
ATTCCTCAACTGTTGCTGACCTCAATCTTATTGCTCGAGCATCCATTCCC
CTATGCCAATGGTCCACTGTGTCGGTCTGTGACTCATCCTCTCTCCTCCC
TCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCTTCCTTCTTTTTTCGCCTC
AAGGCGACGCGCGTGTCAGGGGCGTGAGCGGGGGGGAGCGGAAGCGGGTG
TCGGTGGGGGTGGAGCTCATTTGCAACCCCTCCTTGCTTTTCCTCGATGA
ACCTACCTCGGGTGAGAAGGAGGGAGGGGGGGAGGGAGGAAGGGAGGGAG
GGAGGGAAGGGGTGTTTGTCTGTAGGTGTGGGTGCCTGTGCTTTATTCCC
GTCTTTGTTTGGATGGCGGGCCCACCGAAGAAATGGAAACGATCGCCTCT
ACTCACTTTCTTCACGCCTTCCCTCCCTCCCTCCCTCCCTTCTTCGCTCC
CTTTAGGCCTGGACTCCTTCCAAGCACAGAGTGTGATGAGTGCCATGGGA
TCCCTTGCCCGGAGCGGCCGGACCGTCGTGGCAGGTAAGGAGGGAGGGAG
GGAAGGAGGGAGGGAGGGAAGGAGGAAAGGACGAAGAGGATTGCCTCCTG
CTTCTTTTGTGTCGTTTGAAACAGTTCGGCTGGGCTCGGGGTGGCCGTTT
TTAGTTGATCGACTCATCACCTCCTCCTCCCTTTCTTCCTTCTTTCCTAT
CTTCTCCCACCCACCCCCACGCCCTCCCTCCCTTCCTCCCTCCCTCCTTC
AGCCATTCACCAACCCCGTTCCTCCATTTTCGATCTGTTGGATATGCTGG
TGCTTGTCTCGGAGGGCAGGATCGTCTATTCCGGTAGGGAGGGGGGGAGG
GAGGGAGGGATGGGAGAGTACGCACACACGCACACCACACACACATATAA
GCGCGCACACAGACACACACACACACATATATATATATATATGTAAATAT
ATATATACTTACATACACACTTATACACATACGCATATACACACACGTCT
CTCTCGACTGTGCAGGCAAGGCACGGGAAGCAGTGGCTTATTTCTCTTCC
CAAGGACTCACTTGCCCTCCACAATTTTGCCCCAGCGACTTCTTCTTGGA
TGTGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAAGGAGTATGAGGG
TAACGGCTTATATTTTTTAACAACCCCATCTGTTTTACTTACATGCGTAT
ATCTGGCCTCCATTCATTTTCCTCCCTCTCCTCCCCTCCCTTTCTTCTTC
CCCCCCTCCCTCCCTCCCTAGGTCATCTCCATGGACTACCGCTCGCCCAC
CCTCGAAAAAGCGACCCGGAGTCGTATTGAGCACTTGGACAGGACCTGGC
ACGAGAGGCAGGCAGGGGAGGGAGGGGGGGAGGGAGGGGTGCTGCAGGCG
GTGGGAGCGGGAGCGGGAGCGATGGAGATAAAAGGCGAGGAAATTGAAAA
GGGTAGGTGGAAGAAAGACGAAGGGACAGGAGGGGGTCCATCAGGGAGGG
AAGGGAAGGACACACCCCGACCAATAGTTTTAAAGTGCCTTGCCTTGAAT
TAGTATTCACCCTTCCCCCTCTCCCTCCCTCCCTCCCTCCCTCCTTCCTT
CCTTCCCAAGGCTACCAGTCGTCGTGGGCCCGGCAGTTCTGGATGCTCCT
CCTTCGCGGGCTGAAGCAAAATCGGCGGAACAAATTTGCGTTGGTGGTGA
AGATCCTGAGCAATGCGTTCTTTGCTTTAATCTTGGGAGCGATCTACTCG
AAGAGGGAGGGGTAAGACAGGCAGGGAAAGAGGGATGGAGGTTGGAAGTG
GAGGGAAGAAACGGCGGAGGGAGGGAGGAAGGGTTGACGTTACTGTATTT
GCCCTTTCCCGAACGATTTTGTGATGGAACGGCAAGACGAAGGAGGACAT
ATTTCGTTCATCAACTCACCACTTTCACCCATATTCTCCTCCCTCTCCTC
CTCCTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTTCTCCCCCTCTC
GCGCATTTCCCCACAGGTCGACCCCGGGCCAAACGTCTATTCAAAACTTT
GTCGGGGCCCTCTTCTTCGTCGCCATCAACCAAGGTAACACCCCTCCCTC
CCCCCCCTTCCTCCCTCCCTCCTCCTCACCCCACCTCCCTCCCTCCCTCC
CTTCCCCCAGCCTTTGGCAACCTTCAATCCGTCATCCAGGTCTTTCCCTT
GGAGAAGTACATCGTCCAGAAAGAGCGTGCCGCGAAAGCCTACCATCTCT
CCGCCTACTACTTTGCCAAGGCACGTCTCTTCCCTCCCTCCCTCCCTCCC
TCTCTCTTCTCATCCTTCCTTCTTCCTTGTCTTCTTTTCTCACCCTCCCT
CCCTCCTTCCCTAGCTCCTTTCCGAACTGCCCTTTACCCTCCTAGGGCCC
CTCATCTTCTCGAGCATCGCCTACTGGCTCGTGGGGCTTCAACCTTCCCT
CTCCCCCTTCCTCACCTTCGTCTGTTTTTGCCTCTTGGAAGCAACTTGTG
CTGTCTCCCTCGGCCTGGTCATCAGCGCAGTGGCCCCCGATGTACCAACA
GCCACGGCGCTCTCTCCCGCCATCACGATCGTGTTCTTGCTCTTCTCAGG
CGTGTTTATCAATGTGAAAAGTTTGCCAACAGGGGCGCAGTGGTAGGATG
AGTGGGAAGGGAGGGAGAGGGGAGAGAGGGAGGGAGGGAATGGGGCATGA
AGCGTACGTGTGACGCCGTCGGAGCCCATGGTGGAAGTCTATCCTTACCC
AACACTCTTACCACCACGTCCCTCCCTCCCTCCTCCCGTCCCTCCTAAAG
GTGCCCCTACATGTCTTTCATCAAGTGGAGCTTCAATGCGTATGCCCAAA
ACCAGTTCAAGGGCATGACTTTCTCCTGCCCCGACGCCGAGGGCAAGGGC
TGCCTGACGACAGGCGAGGAGATCCTGGCCCTGTACTCGATGGACGAATA
CGAGGTGTGGCAGTGCGGCTTGGCCTTGCTGGGAATCACCACCATTTTCT
CCATTTTGGGCTACATTATCTTGAGGATGAATAGCCGAAAGTATATGAAG
ATGGTCGGGCCTTCATCTGCTTCCTCCGGTGCGTCTGCCGTTCCCTTTTT
CTCTTCTTCCGCAGCGCTGAATGGTGAGAGAGAGGTAGTGTAAAGAAGCG
TGAACGAAGACTTGGCGCCTAACATATAGCCGTGTGTTTCTTGTGCAGGG
GCGAGGGCACACACACACAAAAAAGATTCAAAAAAGATTCAAGAAGAGGG
GAGATTCAAGATTTTGGGGAGCAGGAGGGGAGAAAAGAGAGAAGGGAGAA
AGGGTAAGGATGCTTCAAGAATTCAAAATAAAATATAAAATTACGAACGT
GCGTGCATGTATGTGTATATATTGGCATACAAATGCGACGAGCGTTGTGA
TACTACGATGAGATATAAGAACAATAAGAAAGAGTACTGATAATAGGTAT
AAAGCGTCGAGGAACAGGCGTGGTGCAGCGTCTTGGCCTTGGCCTGTCTT
TGCTCTTTGATTACAAACCTGAAAGCATAGTCACAAAGTATACAAAACAG
AACAAAGGTGAGAAATGATTGAAGAAATATTCTCGTCAGTTTAAACAAAG
CCGGTGTTTGGGCGTTCAATCTCTTGTCAATAGTGACCCTCATAAAGGCG
AGACGAGACGACAGAATCATGCACCGTGTTGGAGAAGGTCAAACCGCTAA
TAATGAAGCGAGGCAGCAGGGAGGAGGAGTACTGCGGTTCCCTTAAAATA
GAACTAGAATGATGACATAACAAATGTGTCTTCCTGGCATTTTTTTCTTT
TAAACTTCTTCCACAACCTTTCATTCAAATGATCTCTCACTTGTATATCA
TCCATCCGCCCTAGTTGTAGATTTTGCGTGTGATACTACGATACCTTCCA
AACCCTTAGTGCGAAGATACATGTAGATCAGTGGACGTGCATTTGGGTGA
TGTTGGCGAAGTGAGTAAGCCCTGAGAATACGACAGACCATGTATCTAAA
AACAAAAAGCTCTATTACTATATATGTGTGTGTATATATATATATACATA
CATATACAT

Coding sequence (CDS) from alignment at chr20:83290..89098-

>NO20G00250.2 ID=NO20G00250.2|Name=NO20G00250.2|organism=Nannochloropsis oceanica|type=CDS|length=1824bp|location=Sequence derived from alignment at chr20:83290..89098- (Nannochloropsis oceanica)
ATGGGCCAGGTGCCACGTACCCCGGCGATGACGGCACGAGGACAAACCAT
CTCGGACATATTAAAACAATCCAGAAAGACAGCCTCGTCCGAAACGCGCA
GCAGCTACAGCTACAAACCCACACGATACATGGAGCACAAGGAGGATGGC
GGCGACCTGGAGCAACCGCTGCTTCACAAAGGATTTGATACTGCTGCGGA
GACGGCAGGCCACCAATTGGCTTTGAAGCCGATCAAATCCGTCGGGCTCG
CCTGGAGAGGGGTCTCGCTCTCCATTCCCTTAAAGGGAAAGAATAACAAG
GGCAAGACCAAGGAGATCCTCAAGAACATTTCTGGCACCGCGCCTGCTGG
GCATGTGACTGCTATTATGGGGCCCACCGGCTCGGGTAAGTCCTCACTTC
TGAATGCTTTGGCCGGCCGAGTCAGCTTCATTAAGGGCGCCAAACTGGAG
GGAGAGCTGCTAGTCAATGGTGCGCCGGTTGCGTATGGCGTGGTGCGGAG
GCTGTGTGCCTACGTCGTGCAGGACGACGTACTCTACTCCTTCTTGACCG
TGCATGAAACCTTGACGCTGGCGACGCACTTCTACCTCCCTGACTCTCTC
TCGGATGGAGCGAAGGCGGCGTACGTCCGTGACGTTATCAATGCGCTGGG
TCTGGCCAAAGCCGCCAACACCATCATAGGCGACGCGCGTGTCAGGGGCG
TGAGCGGGGGGGAGCGGAAGCGGGTGTCGGTGGGGGTGGAGCTCATTTGC
AACCCCTCCTTGCTTTTCCTCGATGAACCTACCTCGGGCCTGGACTCCTT
CCAAGCACAGAGTGTGATGAGTGCCATGGGATCCCTTGCCCGGAGCGGCC
GGACCGTCGTGGCAGCCATTCACCAACCCCGTTCCTCCATTTTCGATCTG
TTGGATATGCTGGTGCTTGTCTCGGAGGGCAGGATCGTCTATTCCGGCAA
GGCACGGGAAGCAGTGGCTTATTTCTCTTCCCAAGGACTCACTTGCCCTC
CACAATTTTGCCCCAGCGACTTCTTCTTGGATGTCATCTCCATGGACTAC
CGCTCGCCCACCCTCGAAAAAGCGACCCGGAGTCGTATTGAGCACTTGGA
CAGGACCTGGCACGAGAGGCAGGCAGGGGAGGGAGGGGGGGAGGGAGGGG
TGCTGCAGGCGGTGGGAGCGGGAGCGGGAGCGATGGAGATAAAAGGCGAG
GAAATTGAAAAGGGCTACCAGTCGTCGTGGGCCCGGCAGTTCTGGATGCT
CCTCCTTCGCGGGCTGAAGCAAAATCGGCGGAACAAATTTGCGTTGGTGG
TGAAGATCCTGAGCAATGCGTTCTTTGCTTTAATCTTGGGAGCGATCTAC
TCGAAGAGGGAGGGGTCGACCCCGGGCCAAACGTCTATTCAAAACTTTGT
CGGGGCCCTCTTCTTCGTCGCCATCAACCAAGCCTTTGGCAACCTTCAAT
CCGTCATCCAGGTCTTTCCCTTGGAGAAGTACATCGTCCAGAAAGAGCGT
GCCGCGAAAGCCTACCATCTCTCCGCCTACTACTTTGCCAAGCTCCTTTC
CGAACTGCCCTTTACCCTCCTAGGGCCCCTCATCTTCTCGAGCATCGCCT
ACTGGCTCGTGGGGCTTCAACCTTCCCTCTCCCCCTTCCTCACCTTCGTC
TGTTTTTGCCTCTTGGAAGCAACTTGTGCTGTCTCCCTCGGCCTGGTCAT
CAGCGCAGTGGCCCCCGATGTACCAACAGCCACGGCGCTCTCTCCCGCCA
TCACGATCGTGTTCTTGCTCTTCTCAGGCGTGTTTATCAATGTGAAAAGT
TTGCCAACAGGGGCGCAGTGGTAG

Synonyms

Publications