NO20G00170.1, NO20G00170.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00170.1
Unique Name	NO20G00170.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3551
Alignment location	chr20:62011..67272 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:62011..67272 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G00170.1 vs.
Match: EWM22212.1 (hypothetical protein Naga_100337g6 [Nannochloropsis gaditana])

HSP 1 Score: 279.3 bits (713), Expect = 3.400e-71
Identity = 128/212 (60.38%), Postives = 159/212 (75.00%), Query Frame = 0

Query:    6 PRNAIFFCNICTLLQLCFLLFALEMRPRMANAQ--VSSPGVWVHDDKAKCLDGSPPVYYHRPGWGEGADKWMLYYEGGGWCPNKEECRGRSYSDLGSSNNYPKDKALEWEMLTSNPDVNPLLHNWNVVFVKYCDGHMWSAATMDTDTVRGRTLHYRGKYIQEAIIRDLSQNKGMDHAEELVFAGCSAGAMMAYMQVDYWAASDLLPPSIRKV 216
            P N +F C     L LC     + ++P  A     V  PG+W+ D++AKCLDGS PVYYHRPGWG+GA KW+L+YEGGGWC +K EC  R+ + LGSS+ Y    ALEW+M++S+P+ NP LHNWNVVFVKYCDG+ WS ATMDT+ +    LH+RGK+IQEAI+RDL+   G+D  EELVFAGCSAGAM+AY+QVDYWAAS L+PPSIRKV
Sbjct:   13 PLNLLFGC-----LLLCM---GIRLQPTHAEGHETVFVPGIWLDDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKV 216

The following BLAST results are available for this feature:

BLAST of NO20G00170.1 vs.

BLAST of NO20G00170.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22212.1	3.400e-71	60.38	hypothetical protein Naga_100337g6 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G00170	NO20G00170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00170.1	NO20G00170.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00170.1.cds1	NO20G00170.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds2	NO20G00170.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds3	NO20G00170.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds4	NO20G00170.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds5	NO20G00170.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds6	NO20G00170.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds7	NO20G00170.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds8	NO20G00170.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds9	NO20G00170.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00170.1.cds10	NO20G00170.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:62011..67272-
coding sequence from alignment at chr20:62011..67272-

mRNA sequence

>NO20G00170.1 ID=NO20G00170.1|Name=NO20G00170.1|organism=Nannochloropsis oceanica|type=mRNA|length=3551bp
ATAATCATAGATTTTAGTTTTATGTGCTTATTTGTCTGGTTATTGTGTAT
CTTGCTTTTTGATGGTTGAATAAAGGCTGTTTCGGCTCTTGGTTGTTTCA
CAAGACCAGGAGGAATATCCCTGTTTGCGGGATTTTCGCATTCCGTTGTC
TCGCTTAGCCAGGATAAAGGAAGCGACTCTTAGTCCCGATAATGACCTTA
TACTGTAAATGAGAGATTTCGAAACCTCGAACATTTTACATCCCCATAAA
TTCACAATATACGTGAGAACGAAGGTACGTGCACAGCGCACGTCAACGGT
TCTTCAAATTTTGAATATCGGCTGTGCCCTCCTTTCTGCTCGGCGGCTTC
CTTGTGGTTACTTGCGGCTCGATGATCTCGAAGAGTCTCCACAAGCATTA
AGTCACAGATTCTGATGTGCCTTTGATTCTCCTCTTCCCTCGCTTCTTCA
CTCGCCCACCCGATCTCATCGGGCTCCTGGTTGGGTGGACGAATGTGCTT
GGCTTTCCACCTTTCTCATTTTCGCTCTAGCTTGTCCTGAGCCGAGGAAG
ACAGAGCCCAACAGCGTTACCGGGCTTCTCGGATTATCACAAAACCAAAT
TATCCCTGTCCCTGTAAAAACGTATACAAGGCATTGGTGCGCGTATGTAT
GTGTGGCGTGGGACCAACAAGGAAAATATGCCGTCGCTTCTAAGCACCAA
ACCAGGGGTCTACGCCACTTACTCCTCTCACTCTCGCGCGCCAGCTTTTG
ACAATAGCTCATGCATAATCGCATGCCATATCATACATGCACGCAAAGAC
ACACATATACAGAGTACACACAAAGTACAGAACCGCGTTCTCATAAGACT
GCTCTTACTGGTAGTGGCTATCGTCGTGCACTTCCTCCTCCTCTCTCAGT
ACTATCAGCTGACCCCCGAAAATAGCTCGGCCTCTTCTCACATTATATCT
TCCCCCATACATACACACACATACACACACATATACACAACCCATAAGCA
GAGGGTAGCGCCCCCAGGAGGCTACTCTTGTAGGGTATTTTGCGTGTGTT
AGCTGCCCAGCTTTCTCCTTTTTCCCACACAACCATGCGCCAGCATCTCC
CAAGAAATGCAATTTTCTTCTGCAACATATGCACACTACTGCAGCTGTGT
TTTCTCCTATTTGCTCTCGAGATGAGGCCACGCATGGCAAATGCACAGGT
GTCATCTCCTGGGGTGTGGGTGCATGACGACAAGGCAAAATGCCTTGACG
GGTCGCCTCCTGTCTACTACCACCGGCCAGGGTGGGGAGAAGGGGCCGAC
AAGTGGATGCTCTACTACGAAGGCGGTGGGTGGTGCCCGAACAAGGAAGA
GTGCCGCGGTCGATCGTACTCAGACTTGGGCTCTAGCAACAATTATCCCA
AGGACAAGGCGCTGGAATGGGAGATGCTCACCAGCAACCCGGACGTGAAT
CCTTTACTACATAATTGGAACGTGGTGTTTGTGAAATACTGCGACGGGCA
TATGTGGTCCGCGGCCACAATGGACACAGACACGGTGCGAGGCCGGACGC
TGCACTACCGAGGGAAATACATCCAAGAAGCCATTATCCGCGACTTGAGC
CAAAATAAAGGCATGGATCACGCGGAGGAGCTGGTCTTCGCGGGTTGCTC
GGCGGGGGCGATGATGGCATACATGCAAGTCGACTACTGGGCTGCCTCCG
ACCTCCTGCCTCCTTCCATACGTAAGGTGGTGGCTGTGCCGGATAGCGGT
TTCCTCCTCAACTACGACGGTCCTCAGCGCTGCCAGGGGTACGAGAACCG
CATGAGGGAGCTGTGGGATTTCATGCCGAGCATACAGTGGGCTGTGCCGC
AGCAGTGCATCGATAACTTGAAGGAGGACGCCTGGAAGTGCTTCTTTTTC
GCGGAATATGTTGTACCTCATGTCAAGACACCGCTCTTCCTCATCCAGTC
GCGGTATGACAACTGGCAGCGACAGTCGATTTTTTGCGGGAACTACCGAG
ACTACGATGCGAACAACGCCTTTGGCCGTGCCTTTGAGAGAGTCTTTTGG
CGAGTGGTTGGTCGCAACCCGAAAGACGGCTACCTCCTGGACAGCTGTAC
ACGACACTGTGGGTCATGGGGACAGGTGCAGAGCGAGGAAGGCATAACGC
AGCAGGAGGCCTTCCAAAGATGGTATGATGCAATTGGCCCCAATCTCCGC
GCCTCGTCAAACGCTACCATGGCAGGTATCAATACCCATGCCCTCGAACA
TCAAGAGGCGTACATCTTGGCAGAAAAACAACGCCGACTCAAAAGGGAGC
GGTCTTTCCCCTCTTCCCTCCGTGCGCTTGCCTCCCCCACTTCCTCCTCC
TCCCTGCATGACGGCCCTCCATCGACCACGTCTTTTTTCCGGCTCAATAA
TACGGGGATTTTCCCGTGCGACGCCTGCTGTTACAACGGACAGGGCGCGC
CTCTTCCTGCCCCTGAGTTTGAAGAAGAGGAAGGAAGGACGACTCCTCCA
GATAGTGAAGAGGAGGAAGGAAGGACGACTCCTCCAGATAGTGAAGAGGA
GGAAGGAAGGACGACTCCTCCAGATGCTGAAGAGGAGGAAGAAGAAACGG
CTCCTCCTGAGTTTGAAGAAGAAGAAGGAGGAAAGACTCCTCCAGAGTCC
GAAGAAGAGGAAGGAAGGACGACTCCTCCAGGTGCTGAAGAAGAGGAAGA
AGGAGCAGCAACTAACGCTGAGTCCAAGTCTGAAGAGAAGGAAGCGGCTT
CTCCACCCAAATCTGAAGGAGAGGAAGCACTCGGTCCTCCGCCCACATCC
AAAGAAGAGGAAGCAGCGACTACTCCCCGTGAATCAGAAATAAATGACCA
AGCAGAAGACACAGCAGGAGGAGGAGGAGGACGACGAAGACGAGCAGCAG
CAACAACAGTCATAGGAGCAGCGGTAGCGGCAGCAGCAGTAGTAGTAGCG
GCTATAATATCATCTCAAACAGCGGAAAAAGCCGCAGCAGCGACAGCAGC
AGCAGTGACAAAAGCAGGAGCAGCGGTTGAAAGAAAGAAGAGGTCGCTGA
GTGCAATTGCGGGAAGACGGGGTACTGCCGTTTTGCTGGAGCAAGATCAA
CAAAGAGAGAGGCTGCCGGGGGAGGAGGAAGAAGGGAAGAGGAAAGAGGA
GGGGAAGGAGGAGGAGAGGGGGGGGAGATGGAGATGGATGCATTTTAAAA
TGTAGCGCGGGTATGAAAAAAGAGATGTGCTTTTCAGTCGATGGATCGTA
ACGCAAGGTAATTGCCTCTTTCGCAGAAAATTCATGCTTAGGGCGAAGCT
TAATTTGTTTCTCAGGAGGGCGATACCACCATTGACGCGTTGACCCGGAG
GGGGATCCGGTCGAGAGGTTAACTTATGATAACTATAGGGAAAATAGAGG
GCTAGACGAGGGACAACTTGCAAACTTGACTGGTAAGCTGAAATGCTTTA
GGGCGATTAAATGATTTAATGAAATAAATGATAATTGATAGGGGCGTTTG
ATTGAAAAGTATCGTAGCTGTATGCTGCACGAGGTGTTTTGGGTCTGGTG
G

protein sequence of NO20G00170.1

>NO20G00170.1-protein ID=NO20G00170.1-protein|Name=NO20G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=707bp
MRQHLPRNAIFFCNICTLLQLCFLLFALEMRPRMANAQVSSPGVWVHDDK
AKCLDGSPPVYYHRPGWGEGADKWMLYYEGGGWCPNKEECRGRSYSDLGS
SNNYPKDKALEWEMLTSNPDVNPLLHNWNVVFVKYCDGHMWSAATMDTDT
VRGRTLHYRGKYIQEAIIRDLSQNKGMDHAEELVFAGCSAGAMMAYMQVD
YWAASDLLPPSIRKVVAVPDSGFLLNYDGPQRCQGYENRMRELWDFMPSI
QWAVPQQCIDNLKEDAWKCFFFAEYVVPHVKTPLFLIQSRYDNWQRQSIF
CGNYRDYDANNAFGRAFERVFWRVVGRNPKDGYLLDSCTRHCGSWGQVQS
EEGITQQEAFQRWYDAIGPNLRASSNATMAGINTHALEHQEAYILAEKQR
RLKRERSFPSSLRALASPTSSSSLHDGPPSTTSFFRLNNTGIFPCDACCY
NGQGAPLPAPEFEEEEGRTTPPDSEEEEGRTTPPDSEEEEGRTTPPDAEE
EEEETAPPEFEEEEGGKTPPESEEEEGRTTPPGAEEEEEGAATNAESKSE
EKEAASPPKSEGEEALGPPPTSKEEEAATTPRESEINDQAEDTAGGGGGR
RRRAAATTVIGAAVAAAAVVVAAIISSQTAEKAAAATAAAVTKAGAAVER
KKRSLSAIAGRRGTAVLLEQDQQRERLPGEEEEGKRKEEGKEEERGGRWR
WMHFKM*

mRNA from alignment at chr20:62011..67272-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G00170.1 ID=NO20G00170.1|Name=NO20G00170.1|organism=Nannochloropsis oceanica|type=mRNA|length=5262bp|location=Sequence derived from alignment at chr20:62011..67272- (Nannochloropsis oceanica)
ATAATCATAGATTTTAGTTTTATGTGCTTATTTGTCTGGTTATTGTGTAT
CTTGCTTTTTGATGGTTGAATAAAGGCTGTTTCGGCTCTTGGTTGTTTCA
CAAGACCAGGAGGAATATCCCTGTTTGCGGGATTTTCGCATTCCGTTGTC
TCGCTTAGCCAGGATAAAGGAAGCGACTCTTAGTCCCGATAATGACCTTA
TACTGTAAATGAGAGATTTCGAAACCTCGAACATTTTACATCCCCATAAA
TTCACAATATACGTGAGAACGAAGGTACGTGCACAGCGCACGTCAACGGT
TCTTCAAATTTTGAATATCGGCTGTGCCCTCCTTTCTGCTCGGCGGCTTC
CTTGTGGTTACTTGCGGCTCGATGATCTCGAAGAGTCTCCACAAGCATTA
AGTCACAGATTCTGATGTGCCTTTGATTCTCCTCTTCCCTCGCTTCTTCA
CTCGCCCACCCGATCTCATCGGGCTCCTGGTTGGGTGGACGAATGTGCTT
GGCTTTCCACCTTTCTCATTTTCGCTCTAGCTTGTCCTGAGCCGAGGAAG
ACAGAGCCCAACAGCGTTACCGGGCTTCTCGGATTATCACAAAACCAAAT
TATCCCTGTCCCTGTAAAAACGTATACAAGGCATTGGTGCGCGTATGTAT
GTGTGGCGTGGGACCAACAAGGAAAATATGCCGTCGCTTCTAAGCACCAA
ACCAGGGGTCTACGCCACTTACTCCTCTCACTCTCGCGCGCCAGCTTTTG
ACAATAGCTCATGCATAATCGCATGCCATATCATACATGCACGCAAAGAC
ACACATATACAGAGTACACACAAAGTACAGAACCGCGTTCTCATAAGACT
GCTCTTACTGGTAGTGGCTATCGTCGTGCACTTCCTCCTCCTCTCTCAGT
ACTATCAGCTGACCCCCGAAAATAGCTCGGCCTCTTCTCACATTATATCT
TCCCCCATACATACACACACATACACACACATATACACAACCCATAAGCA
GAGGGTAGCGCCCCCAGGAGGCTACTCTTGTAGGGTATTTTGCGTGTGTT
AGCTGCCCAGCTTTCTCCTTTTTCCCACACAACCATGCGCCAGCATCTCC
CAAGAAATGCAATTTTCTTCTGCAACATATGCACACTACTGCAGCTGTGT
TTTCTCCTATTTGCTCTCGAGATGAGGCCACGCATGGCAAATGCACAGGT
GTCATCTCCTGGGGTGTGGGTGCATGACGACAAGGCAAAATGCCTTGACG
GGTCGCCTCCTGGTAAGGGCAGAGTGGATGGATGGGTTGCATCGAGGGAG
GTCGGACTGATCACACTGTTGAGTGAGATATAAGCGTGCATGAGGGTGAG
AGTGGGTAGAGGAGGGGAAGGAGGGAATCAAGCTGTTAATAAGGCGCTCT
AATTGCATATTTCTCCCCATTTGCTTCTGATACACATAACTTGGGATGGA
GGGGTGAATAGCGCAGGGGGGAGCTAGAAAGGAGGGGTGGTAACTGACGT
GAGCTCACATTTTTCTCTCACGTCTATACCTTTATCATTGCCATCCCCCA
TTCCCCCCACTCCCCCGCAGTCTACTACCACCGGCCAGGGTGGGGAGAAG
GGGCCGACAAGTGGATGCTCTACTACGAAGGTCCGTCCCTCCCTGTTCAT
CACTTCTTTCCCTTCCCCGTTTGTCCTCGTTTGCCTTCTCACCCTCGCGC
CCTGTATCTCTCCCTTTTTCCCTTATGATGATCATCCAGGCGGTGGGTGG
TGCCCGAACAAGGAAGAGTGCCGCGGTCGATCGTACTCAGACTTGGGCTC
TAGCAACAATTATCCCAAGGACAAGGGTGCGTAGAAGAAAGGGCATGGGA
GGAAGGGGAGGGAAAACGGGGGAAGCAGCAAAGATTCGAAGGAAGGAATG
TGGGAGATGATGCATTTGTATGTCCACCCAGGGGAGAGATTGGCGGAATA
GAGTAAAAGCAGATTGCACTTCCTCTCGCTAGTCTCAGGAGGCTCATCAA
ATGTCCTCCATCTACACATACCCGCCCATCTGTTCCTACACACTCACAGC
GCTGGAATGGGAGATGCTCACCAGCAACCCGGACGTGAATCCTTTACTAC
ATAATTGGAACGTGGTGTTTGTGAAATACTGCGACGGGCATATGTGGTCC
GCGGCCACAATGGACACAGACACGGTACGAGAAACACCGAGGGAGAGACA
CAAGCAAGGGGAGGGAAGGGGGGAGTAGAAAAAAGCAGGGGCGAGGAAAG
GACTAAAGACATAAACCAAATTAATGTGATACTCTGCTCTATCACCGAAT
GTCTCCATGTAGGTGCGAGGCCGGACGCTGCACTACCGAGGGAAATACAT
CCAAGAAGCCATTATCCGCGACTTGAGCCAAAATAAGTGCGTACAGGCAG
GAAGGAGGGAGGGAGGGAGGGAGGATGAAAGAAGAGAAAGTAAAAGTGCT
CTACAACAGCAGCACCTGTGATCTATTTCCCATCTTCTTCTCCTCGTTCT
CCTCTGTTCCCCCATATCTCATTCCATGGTATACAGAGGCATGGATCACG
CGGAGGAGCTGGTCTTCGCGGGTTGCTCGGCGGGGGCGATGATGGCATAC
ATGCAAGTCGACTACTGGGCTGCCTCCGACCTCCTGCCTCCTTCCATACG
TAAGGTAGGTAGGGAGGGCACGGCTCGACAACAAAAATGTTCGTCCGCTC
CCCTCTTTTTTCCTTTTTTAATTCCCACCCCTCCACAGCCCCGTATTTGA
CGTCATATTGACATGTATCTTGATAAGTTGTTCTTCACATGATTCCTCCT
TCTCTCCTTCCCTCCTTATCCCGCTTCCTGCCCTTAGGTGGTGGCTGTGC
CGGATAGCGGTTTCCTCCTCAACTACGACGGTCCTCAGCGCTGCCAGGGG
TACGAGAACCGCATGAGGGAGCTGTGGGATTTCATGCCGAGCATACAGTG
GGCTGTGCCGCAGCAGTGCATCGATAACTTGAAGGAGGACGCCTGGAAGG
TAGGCGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAG
GGAGGGTAGTGGGTACCATAATAATAATGATGATCCATGACGTCGTCACG
ACCGCCTCAGCGCTCATCCTCCTTCGCCCTGTCCCATCCTCTCACCCTCC
CACTCTCCTGCCTCAAAGTGCTTCTTTTTCGCGGAATATGTTGTACCTCA
TGTCAAGACACCGCTCTTCCTCATCCAGTCGCGGTATGACAACTGGCAGC
GACAGTCGATTTTTTGCGGGAACTACCGAGACTACGGTATGACATTATTC
TGTCCCTCCCTCCACCTCTCCTTCCCTCCTTCCTTCCCTCCCTCTCTATT
TTGGGTCTTCTCCCCCCTCCGCCTCTCTTTCTTTGTTTCCTTTCGGCAAG
GACCGGCATCCGCAATTCAAAATAGCCATTTCACCCTCCTGCCTCACCCC
TCCTCTCTTCCCTCCCTCCTAGATGCGAACAACGCCTTTGGCCGTGCCTT
TGAGAGAGTCTTTTGGCGAGTGGTTGGTCGCAACCCGAAAGACGGCTACC
TCCTGGACAGCTGTACACGACACTGTGGGTCATGGGGACAGGTGCAGAGC
GAGGAAGGCATAACGCAGCAGGTAGGAACAGAAAGAGCAAGAGAAGAGGA
AGGGAGGAAGAGGGAGAAAAGAGTGTGCGGCATCCTTTATAGCTGCCCTC
CGCACCGTTGCAGGTGCGGGGGGGTAGGCAGGGTAAGAGGGAGGGAGGGA
AGGAGGGAGGATAGTGGTCGGAATGAAGCGCAGAAGGAGATGCGCATAAA
AGTGTGCGAGCAGACGGCTCATTCTCCCCTCCCTCCCTTCCTGCTTGCCT
CTCTCCCTTCTTCCAGGAGGCCTTCCAAAGATGGTATGATGCAATTGGCC
CCAATCTCCGCGCCTCGTCAAACGCTACCATGGCAGGTATCAATACCCAT
GCCCTCGAACATCAAGAGGCGTACATCTTGGCAGAAAAACAACGCCGACT
CAAAAGGGAGCGGTCTTTCCCCTCTTCCCTCCGTGCGCTTGCCTCCCCCA
CTTCCTCCTCCTCCCTGCATGACGGCCCTCCATCGACCACGTCTTTTTTC
CGGCTCAATAATACGGGGATTTTCCCGTGCGACGCCTGCTGTTACAACGG
ACAGGGCGCGCCTCTTCCTGCCCCTGAGTTTGAAGAAGAGGAAGGAAGGA
CGACTCCTCCAGATAGTGAAGAGGAGGAAGGAAGGACGACTCCTCCAGAT
AGTGAAGAGGAGGAAGGAAGGACGACTCCTCCAGATGCTGAAGAGGAGGA
AGAAGAAACGGCTCCTCCTGAGTTTGAAGAAGAAGAAGGAGGAAAGACTC
CTCCAGAGTCCGAAGAAGAGGAAGGAAGGACGACTCCTCCAGGTGCTGAA
GAAGAGGAAGAAGGAGCAGCAACTAACGCTGAGTCCAAGTCTGAAGAGAA
GGAAGCGGCTTCTCCACCCAAATCTGAAGGAGAGGAAGCACTCGGTCCTC
CGCCCACATCCAAAGAAGAGGAAGCAGCGACTACTCCCCGTGAATCAGAA
ATAAATGACCAAGCAGAAGACACAGCAGGAGGAGGAGGAGGACGACGAAG
ACGAGCAGCAGCAACAACAGTCATAGGAGCAGCGGTAGCGGCAGCAGCAG
TAGTAGTAGCGGCTATAATATCATCTCAAACAGCGGAAAAAGCCGCAGCA
GCGACAGCAGCAGCAGTGACAAAAGCAGGAGCAGCGGTTGAAAGAAAGAA
GAGGTCGCTGAGTGCAATTGCGGGAAGACGGGGTACTGCCGTTTTGCTGG
AGCAAGATCAACAAAGAGAGAGGCTGCCGGGGGAGGAGGAAGAAGGGAAG
AGGAAAGAGGAGGGGAAGGAGGAGGAGAGGGGGGGGAGATGGAGATGGAT
GCATTTTAAAATGTAGCGCGGGTATGAAAAAAGAGATGTGCTTTTCAGTC
GATGGATCGTAACGCAAGGTAATTGCCTCTTTCGCAGAAAATTCATGCTT
AGGGCGAAGCTTAATTTGTTTCTCAGGAGGGCGATACCACCATTGACGCG
TTGACCCGGAGGGGGATCCGGTCGAGAGGTTAACTTATGATAACTATAGG
GAAAATAGAGGGCTAGACGAGGGACAACTTGCAAACTTGACTGGTAAGCT
GAAATGCTTTAGGGCGATTAAATGATTTAATGAAATAAATGATAATTGAT
AGGGGCGTTTGATTGAAAAGTATCGTAGCTGTATGCTGCACGAGGTGTTT
TGGGTCTGGTGG

Coding sequence (CDS) from alignment at chr20:62011..67272-

>NO20G00170.1 ID=NO20G00170.1|Name=NO20G00170.1|organism=Nannochloropsis oceanica|type=CDS|length=2121bp|location=Sequence derived from alignment at chr20:62011..67272- (Nannochloropsis oceanica)
ATGCGCCAGCATCTCCCAAGAAATGCAATTTTCTTCTGCAACATATGCAC
ACTACTGCAGCTGTGTTTTCTCCTATTTGCTCTCGAGATGAGGCCACGCA
TGGCAAATGCACAGGTGTCATCTCCTGGGGTGTGGGTGCATGACGACAAG
GCAAAATGCCTTGACGGGTCGCCTCCTGTCTACTACCACCGGCCAGGGTG
GGGAGAAGGGGCCGACAAGTGGATGCTCTACTACGAAGGCGGTGGGTGGT
GCCCGAACAAGGAAGAGTGCCGCGGTCGATCGTACTCAGACTTGGGCTCT
AGCAACAATTATCCCAAGGACAAGGCGCTGGAATGGGAGATGCTCACCAG
CAACCCGGACGTGAATCCTTTACTACATAATTGGAACGTGGTGTTTGTGA
AATACTGCGACGGGCATATGTGGTCCGCGGCCACAATGGACACAGACACG
GTGCGAGGCCGGACGCTGCACTACCGAGGGAAATACATCCAAGAAGCCAT
TATCCGCGACTTGAGCCAAAATAAAGGCATGGATCACGCGGAGGAGCTGG
TCTTCGCGGGTTGCTCGGCGGGGGCGATGATGGCATACATGCAAGTCGAC
TACTGGGCTGCCTCCGACCTCCTGCCTCCTTCCATACGTAAGGTGGTGGC
TGTGCCGGATAGCGGTTTCCTCCTCAACTACGACGGTCCTCAGCGCTGCC
AGGGGTACGAGAACCGCATGAGGGAGCTGTGGGATTTCATGCCGAGCATA
CAGTGGGCTGTGCCGCAGCAGTGCATCGATAACTTGAAGGAGGACGCCTG
GAAGTGCTTCTTTTTCGCGGAATATGTTGTACCTCATGTCAAGACACCGC
TCTTCCTCATCCAGTCGCGGTATGACAACTGGCAGCGACAGTCGATTTTT
TGCGGGAACTACCGAGACTACGATGCGAACAACGCCTTTGGCCGTGCCTT
TGAGAGAGTCTTTTGGCGAGTGGTTGGTCGCAACCCGAAAGACGGCTACC
TCCTGGACAGCTGTACACGACACTGTGGGTCATGGGGACAGGTGCAGAGC
GAGGAAGGCATAACGCAGCAGGAGGCCTTCCAAAGATGGTATGATGCAAT
TGGCCCCAATCTCCGCGCCTCGTCAAACGCTACCATGGCAGGTATCAATA
CCCATGCCCTCGAACATCAAGAGGCGTACATCTTGGCAGAAAAACAACGC
CGACTCAAAAGGGAGCGGTCTTTCCCCTCTTCCCTCCGTGCGCTTGCCTC
CCCCACTTCCTCCTCCTCCCTGCATGACGGCCCTCCATCGACCACGTCTT
TTTTCCGGCTCAATAATACGGGGATTTTCCCGTGCGACGCCTGCTGTTAC
AACGGACAGGGCGCGCCTCTTCCTGCCCCTGAGTTTGAAGAAGAGGAAGG
AAGGACGACTCCTCCAGATAGTGAAGAGGAGGAAGGAAGGACGACTCCTC
CAGATAGTGAAGAGGAGGAAGGAAGGACGACTCCTCCAGATGCTGAAGAG
GAGGAAGAAGAAACGGCTCCTCCTGAGTTTGAAGAAGAAGAAGGAGGAAA
GACTCCTCCAGAGTCCGAAGAAGAGGAAGGAAGGACGACTCCTCCAGGTG
CTGAAGAAGAGGAAGAAGGAGCAGCAACTAACGCTGAGTCCAAGTCTGAA
GAGAAGGAAGCGGCTTCTCCACCCAAATCTGAAGGAGAGGAAGCACTCGG
TCCTCCGCCCACATCCAAAGAAGAGGAAGCAGCGACTACTCCCCGTGAAT
CAGAAATAAATGACCAAGCAGAAGACACAGCAGGAGGAGGAGGAGGACGA
CGAAGACGAGCAGCAGCAACAACAGTCATAGGAGCAGCGGTAGCGGCAGC
AGCAGTAGTAGTAGCGGCTATAATATCATCTCAAACAGCGGAAAAAGCCG
CAGCAGCGACAGCAGCAGCAGTGACAAAAGCAGGAGCAGCGGTTGAAAGA
AAGAAGAGGTCGCTGAGTGCAATTGCGGGAAGACGGGGTACTGCCGTTTT
GCTGGAGCAAGATCAACAAAGAGAGAGGCTGCCGGGGGAGGAGGAAGAAG
GGAAGAGGAAAGAGGAGGGGAAGGAGGAGGAGAGGGGGGGGAGATGGAGA
TGGATGCATTTTAAAATGTAG

Synonyms

Publications