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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr19 | genome | chr19:774201..777802 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO19G02600.1 vs.
Match: EWM23757.1 (o-acetylhomoserine o-acetylserine sulfhydrylase [Nannochloropsis gaditana]) HSP 1 Score: 817.0 bits (2109), Expect = 3.000e-233 Identity = 396/457 (86.65%), Postives = 424/457 (92.78%), Query Frame = 0
Query: 1 MEPLYNEASGGNGGGYSSGGRGEKEYRFETLQVHAGQSPDPHSLSRAVPIYASSSFVFRDHEHGARLFALEEFGNLYSRIMNPTNDVFEKRVAALEGGKMAVATSSGQAAQFLTIATIAEAGDNIVSACTLYGGTYCQFKVSLPRLGIQVKFAQDDDPASFDILVDDKTKALYVETMGNPKYNIPRFTELKAVAKKHGIPLIVDNTFGGCGAICRPIQHGADIVVESATKWIGGHGTTIGGVIVDAGTFDWSNGKFPLFTDPSPGYHGLKFWEVFGGEKSILGFNGAFAIRARVEGLRDFGACQNPFGSFLLLQGLETLSLRVERITHNAMHLARWLQTHRSVAWVRYPGLPDHESHELAKQYFRPGVFGPVLSFGVRGGREGGIIFINSCVLASHLANVGDAKTLVIHPASTTHQQLTEAEQEGSGVTADMIRVSVGIEHLDDIKDDFDQALEKAT 458
MEPLYNEA G S R EYRFETLQVHAGQSPDPHSLSRAVPIYASSSFVFRDHEHGARLFALEE GNLYSRIMNPTNDVFEKRVAALEGGKMAVAT+SGQAAQFL I T+A+AGDN VS+C+LYGGTYCQFKVSLPRLGI +FA DDDPASF++LVD+KTKALYVET+GNPKYNIPRF ELK +A+KH IPLIVDNTFGGCGAICRPI+HGADIVVESATKWIGGHGTTIGGVIVDAGTFDWSNGKFPLFTDPSPGYHGLKFW+VFGGEKS+LGFNGAFA+RARVEGLRDFGACQNPFG+FLLLQGLETLSLR+ERI HNA+HLARWL+T SVAWVRYPGLP+HES+E A+QYFRPG+FGPVLSFGV+GGR+ G IFINSCVLASHLANVGDAKTL+IHPASTTHQQLTE EQEGSGVTADMIRVSVGIEHL+DIK DF QAL KAT
Sbjct: 1 MEPLYNEAQPNIEGDECSEKRA--EYRFETLQVHAGQSPDPHSLSRAVPIYASSSFVFRDHEHGARLFALEESGNLYSRIMNPTNDVFEKRVAALEGGKMAVATASGQAAQFLAIVTLAQAGDNFVSSCSLYGGTYCQFKVSLPRLGISARFAPDDDPASFEMLVDNKTKALYVETLGNPKYNIPRFKELKMLAEKHRIPLIVDNTFGGCGAICRPIEHGADIVVESATKWIGGHGTTIGGVIVDAGTFDWSNGKFPLFTDPSPGYHGLKFWDVFGGEKSVLGFNGAFAVRARVEGLRDFGACQNPFGAFLLLQGLETLSLRIERINHNALHLARWLKTCSSVAWVRYPGLPEHESYERARQYFRPGLFGPVLSFGVKGGRKAGTIFINSCVLASHLANVGDAKTLIIHPASTTHQQLTEREQEGSGVTADMIRVSVGIEHLEDIKADFAQALRKAT 455
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO19G02600.1 ID=NO19G02600.1|Name=NO19G02600.1|organism=Nannochloropsis oceanica|type=mRNA|length=2026bp
CCACGGTAGGACTCACAGATTGTAACTTGTGGTATAAATCTAGAAATGCA
TGGATGCGCTAGCTGAGATAACGCTCTTCTTTAAACTATTTATGGGATGG
TTTTCCCTCATGTGTAATCATGTGACGTGGAGGAATTGTGCTCTGATAGA
GAGTATTGTTTGTGGGTATAGGTTGCACGTGATAATTTTAGGATTGTAGG
AAACTATAGGAAAAAGATGGGGACGTATGAGACAGTTCCTCCAAAATCGG
CGAGGCAAAGCCCCTGAGTCCTGACGGGCTGCATCATCACAAGCACCACA
CACACAAACACACACACACGTACACTACAATCATTGGCCAGGCCACACGG
TAGAGGCAGCATGGAACATAGAAGGATTTCTCCTTTGTAGCGAAGCTATA
TGCATATTGAGCCGCGGAGACTGTGTCGTCGTGTAACAGGAGGTTGTTGC
CCATCAAGCGCCAGGAAAATGTCAGCGACAGCCATGTGAGACATACATCA
CGTCCGTCGTCCATAACCTCGTGCATATTTCAATAGGACAGATAATCAAA
GCGAAAAGGGAGGAATGGAGCCGCTCTACAACGAAGCCTCAGGTGGCAAC
GGCGGCGGCTACAGCAGCGGTGGTAGAGGGGAAAAGGAGTACAGGTTTGA
GACGCTCCAAGTGCATGCAGGCCAGTCTCCCGACCCACACTCCCTCTCTC
GTGCCGTCCCCATATATGCCTCCTCCTCTTTCGTCTTTCGGGACCATGAG
CACGGAGCCCGCCTCTTTGCCCTTGAAGAATTTGGAAACTTGTACAGTCG
GATCATGAATCCAACTAACGACGTGTTTGAAAAGAGGGTGGCAGCCCTGG
AGGGAGGAAAGATGGCAGTGGCCACTTCGTCAGGCCAAGCCGCACAATTC
CTGACGATCGCGACGATTGCGGAGGCAGGGGACAACATTGTCTCGGCCTG
CACGTTGTACGGAGGAACCTATTGTCAGTTCAAGGTTTCGTTACCCCGCC
TTGGCATCCAAGTTAAGTTCGCCCAGGATGACGACCCCGCGTCATTTGAT
ATCCTCGTGGATGACAAAACTAAAGCACTTTATGTCGAGACGATGGGCAA
TCCCAAGTATAACATTCCCCGTTTTACGGAACTCAAAGCCGTGGCAAAGA
AACATGGGATACCACTTATTGTCGATAACACCTTCGGCGGTTGCGGGGCC
ATCTGCCGACCAATCCAGCACGGCGCGGACATCGTCGTCGAGAGCGCTAC
CAAATGGATTGGGGGGCACGGGACGACGATTGGCGGGGTGATTGTGGATG
CTGGCACGTTTGACTGGAGCAATGGAAAATTTCCACTTTTTACTGACCCT
TCTCCTGGCTATCACGGCCTCAAATTTTGGGAGGTGTTCGGCGGTGAAAA
GAGCATTTTGGGCTTCAACGGTGCGTTTGCCATCCGTGCCCGCGTCGAGG
GTCTCCGGGACTTTGGTGCATGTCAGAATCCATTCGGCTCCTTTTTACTC
CTGCAGGGTCTGGAGACGCTCTCCTTGCGGGTTGAGCGCATTACACACAA
CGCCATGCATCTGGCTCGCTGGCTGCAAACCCACCGAAGCGTTGCTTGGG
TTCGCTACCCAGGACTGCCTGACCACGAGTCGCATGAACTGGCCAAGCAA
TATTTCAGACCAGGAGTGTTCGGTCCCGTGCTGAGCTTCGGGGTGAGGGG
TGGACGGGAAGGGGGCATCATTTTTATCAACAGCTGCGTACTCGCTTCAC
ACCTTGCCAACGTTGGCGACGCCAAAACATTGGTCATCCATCCGGCTTCT
ACCACGCACCAGCAGCTCACCGAGGCAGAGCAGGAAGGGAGTGGGGTGAC
AGCGGATATGATAAGGGTTTCGGTGGGTATCGAGCACCTGGACGACATCA
AAGATGACTTTGACCAGGCGCTGGAAAAGGCTACTAGAGCCTAGAAGAAG
CTGAGAGATAGGGCTTCACTGTAAGAGCAAGAACCATTAGACAGCTAGAA
AGAAGGAAAGAGGAAGTAACAAGATA back to topprotein sequence of NO19G02600.1 >NO19G02600.1-protein ID=NO19G02600.1-protein|Name=NO19G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MEPLYNEASGGNGGGYSSGGRGEKEYRFETLQVHAGQSPDPHSLSRAVPI
YASSSFVFRDHEHGARLFALEEFGNLYSRIMNPTNDVFEKRVAALEGGKM
AVATSSGQAAQFLTIATIAEAGDNIVSACTLYGGTYCQFKVSLPRLGIQV
KFAQDDDPASFDILVDDKTKALYVETMGNPKYNIPRFTELKAVAKKHGIP
LIVDNTFGGCGAICRPIQHGADIVVESATKWIGGHGTTIGGVIVDAGTFD
WSNGKFPLFTDPSPGYHGLKFWEVFGGEKSILGFNGAFAIRARVEGLRDF
GACQNPFGSFLLLQGLETLSLRVERITHNAMHLARWLQTHRSVAWVRYPG
LPDHESHELAKQYFRPGVFGPVLSFGVRGGREGGIIFINSCVLASHLANV
GDAKTLVIHPASTTHQQLTEAEQEGSGVTADMIRVSVGIEHLDDIKDDFD
QALEKATRA* back to topmRNA from alignment at chr19:774201..777802- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO19G02600.1 ID=NO19G02600.1|Name=NO19G02600.1|organism=Nannochloropsis oceanica|type=mRNA|length=3602bp|location=Sequence derived from alignment at chr19:774201..777802- (Nannochloropsis oceanica)
CCACGGTAGGACTCACAGATTGTAACTTGTGGTATAAATCTAGAAATGCA
TGGATGCGCTAGCTGAGATAACGCTCTTCTTTAAACTATTTATGGGATGG
TTTTCCCTCATGTGTAATCATGTGACGTGGAGGAATTGTGCTCTGATAGA
GAGTATTGTTTGTGGGTATAGGTTGCACGTGATAATTTTAGGATTGTAGG
AAACTATAGGAAAAAGATGGGGACGTATGAGACAGTTCCTCCAAAATCGG
CGAGGCAAAGCCCCTGAGTCCTGACGGGCTGCATCATCACAAGCACCACA
CACACAAACACACACACACGTACACTACAATCATTGGCCAGGCCACACGG
TAGAGGCAGCATGGAACATAGAAGGATTTCTCCTTTGTAGCGAAGCTATA
TGCATATTGAGCCGCGGAGACTGTGTCGTCGTGTAACAGGAGGTTGTTGC
CCATCAAGCGCCAGGAAAATGTCAGCGACAGCCATGTGAGACATACATCA
CGTCCGTCGTCCATAACCTCGTGCATATTTCAATAGGACAGATAATCAAA
GCGAAAAGGGAGGAATGGAGCCGCTCTACAACGAAGCCTCAGGTGGCAAC
GGCGGCGGCTACAGCAGCGGTGGTAGAGGGGAAAAGGAGTACAGGTATGT
GACGCATGCATTTGAAATATGTGCGTCATAGAAAAGGACGTGAAGCCGTA
CGGTGCTTACTTGTCAGGTGTAGGGTACTGACAGCATCCGGCAAGACTTT
ACGCCCCTCCCCTCCTCTTCCTTACTCGTATTCGTACCTACTCACCCTTT
GCGCGCACAGGTTTGAGACGCTCCAAGTGCATGCAGGTATGTAATCATGT
GGTTTTCTTTTTTCCCTTCTTTCGTCCCCCATTTTTTTTAATACCTCACT
ACTCTTCATTCTCTCTTGCTCCAGGCCAGTCTCCCGACCCACACTCCCTC
TCTCGTGCCGTCCCCATATATGCCTCCTCCTCTTTCGTCTTTCGGGACCA
TGAGCACGGAGCCCGCCTCTTTGCCCTTGAAGAATTTGGAAACTTGTACA
GTCGGTAAGCTCTTGGCGAGTTTAAATGTTTATAAGAGTAATCTTTTCAT
CCGTCAAATACCCTGAAGTCTCCTTTGTCTCCCTCACTTTCCCTCCTGGT
CCTGCCTTTGCGCGATCTTAGTCGTATGTAAACAGTATCATCGCATCAAA
TGTCTTATTTACCCTCCTATTTATTTTTTCTTTCTTGGTTTACACTAGGA
TCATGAATCCAACTAACGACGTGTTTGAAAAGAGGGTGGCAGCCCTGGAG
GGAGGAAAGATGGCAGTGGCCACTTCGTCAGGCCAAGCCGCACAATTCCT
GACGATCGCGACGATTGCGGAGGCAGGGGACAACATTGGTGAGAATTGAT
TTTTTAAAAACGAGGGGATTAAGGGAAGGAGGGAGATTAGGATGAGGCTG
TAAAGCTCGGCTCTCGTACCGTATTGTACTTCGCAGCAAGGCCACTTGCT
CAAACAAGGACCCTTCTATATTTTTGCTGTCCTTGCACCACTTGGCTCCA
ATATACGATAACCTTTGACCCGTGCTTTTCAAACGTTATGAAACATACCT
ACAAAGTCTCGGCCTGCACGTTGTACGGAGGAACCTATTGTCAGTTCAAG
GTTTCGTTACCCCGCCTTGGCATCCAAGTTAAGTTCGCCCAGGATGACGA
CCCCGCGTCATTTGATATCCTCGTGGATGACAAAACTAAAGCACTTTATG
TCGAGACGATGGGCAATCCCAAGGTATGTATGGTGGTAGTTGGACTTCTT
AAACTCGCATTCAGACGTTAGGGCTTGGCGAGAGTGTACGATTGTCCTGT
AGCCATGTCGTCTAATGTCCTCCTTCCTTTCTATACCGACAGTATAACAT
TCCCCGTTTTACGGAACTCAAAGCCGTGGCAAAGAAACATGGGATACCAC
TTATTGTCGATAACACCTTCGGCGGTTGCGGGGCCATCTGCCGACCAATC
CAGGTACGTTCGAGTGTGTGAATGAGGGTACTCGAAAGGAAATTAAGGAT
AGAGTAAAATTCTTGGACAATGTTTGTTGGTTGTGTGGGCAAGCCCAACT
GTTGGCTAAAAATATGCATGTATTGCATGGTTTGGCCTTCTTCATCAGCC
CTCTCACTCACATATATGTGCACACACAATAGCACGGCGCGGACATCGTC
GTCGAGAGCGCTACCAAATGGATTGGGGGGCACGGGACGACGATTGGCGG
GGTGATTGTGGATGCTGGCACGTTTGACTGGAGCAATGGTATGAAATAAA
ATGAAAGGAAACGAAAAAGGGCGACGAGTTGGCAGGGATTCACCGACCGA
TGGCATGTGATTTTGATAGACAAAATATGCACCCATCTCTGTACACAATC
GATATAGGAAAATTTCCACTTTTTACTGACCCTTCTCCTGGCTATCACGG
CCTCAAATTTTGGGAGGTGTTCGGCGGTGAAAAGGTATGCATATCTTGTG
TTTTAACTTATTCTAAGAGGCTCAGTGAAGTAGTCATATCTGATAAACTA
CTATGTGCACCTCTCCAGTATTGACCTCGGTAAATTTCACCACACATGCA
CGACAGAGCATTTTGGGCTTCAACGGTGCGTTTGCCATCCGTGCCCGCGT
CGAGGGTCTCCGGGACTTTGGTGCATGTCAGAATCCATTCGGCTCCTTTT
TACTCCTGCAGGTATGCTTCTATGGTCCAAAATATCTCCGATAAAAGGGC
GTGAATGGCTCTTTCTTCTCCTTTTTTTAAATCTCACTTACTTCACATGT
TTCCATACACGTAGGGTCTGGAGACGCTCTCCTTGCGGGTTGAGCGCATT
ACACACAACGCCATGCATCTGGCTCGCTGGCTGCAAACCCACCGAAGGTG
AGATTTGTTTGCATTCATACTCATGTCTACGTGTGCCGAGCTAACGTTAC
TATTGCGCCTTAAACCTTGATCCACACAATAGAGTCATGAAAAGTAGTCC
TCTTCTAATGTTCCTTTCATCCTTCCCTGCAGCGTTGCTTGGGTTCGCTA
CCCAGGACTGCCTGACCACGAGTCGCATGAACTGGCCAAGCAATATTTCA
GACCAGGAGTGTTCGGTCCCGTGCTGAGCTTCGGGGTGAGGGGTGGACGG
GAAGGTAAGGATGCGCCAGTGTATGTTTAAAACTCTCTGTGTCGGTTCAT
GTGTTTCTGTCTCTCCGTCTGGGCCAACGTCACGTACGAGACGCGGAATG
GTTTACTCGAATTTCAAACCAATACGCACATACACAGGGGGCATCATTTT
TATCAACAGCTGCGTACTCGCTTCACACCTTGCCAACGTTGGCGACGCCA
AAACATTGGTCATCCATCCGGCTTCTACCACGCACCAGCAGCTCACCGAG
GCAGAGCAGGAAGGGAGTGGGGTGACAGCGGATATGATAAGGGTTTCGGT
GGGTATCGAGCACCTGGACGACATCAAAGATGACTTTGACCAGGCGCTGG
AAAAGGCTACTAGAGCCTAGAAGAAGCTGAGAGATAGGGCTTCACTGTAA
GAGCAAGAACCATTAGACAGCTAGAAAGAAGGAAAGAGGAAGTAACAAGA
TA back to topCoding sequence (CDS) from alignment at chr19:774201..777802- >NO19G02600.1 ID=NO19G02600.1|Name=NO19G02600.1|organism=Nannochloropsis oceanica|type=CDS|length=1380bp|location=Sequence derived from alignment at chr19:774201..777802- (Nannochloropsis oceanica)
ATGGAGCCGCTCTACAACGAAGCCTCAGGTGGCAACGGCGGCGGCTACAG
CAGCGGTGGTAGAGGGGAAAAGGAGTACAGGTTTGAGACGCTCCAAGTGC
ATGCAGGCCAGTCTCCCGACCCACACTCCCTCTCTCGTGCCGTCCCCATA
TATGCCTCCTCCTCTTTCGTCTTTCGGGACCATGAGCACGGAGCCCGCCT
CTTTGCCCTTGAAGAATTTGGAAACTTGTACAGTCGGATCATGAATCCAA
CTAACGACGTGTTTGAAAAGAGGGTGGCAGCCCTGGAGGGAGGAAAGATG
GCAGTGGCCACTTCGTCAGGCCAAGCCGCACAATTCCTGACGATCGCGAC
GATTGCGGAGGCAGGGGACAACATTGTCTCGGCCTGCACGTTGTACGGAG
GAACCTATTGTCAGTTCAAGGTTTCGTTACCCCGCCTTGGCATCCAAGTT
AAGTTCGCCCAGGATGACGACCCCGCGTCATTTGATATCCTCGTGGATGA
CAAAACTAAAGCACTTTATGTCGAGACGATGGGCAATCCCAAGTATAACA
TTCCCCGTTTTACGGAACTCAAAGCCGTGGCAAAGAAACATGGGATACCA
CTTATTGTCGATAACACCTTCGGCGGTTGCGGGGCCATCTGCCGACCAAT
CCAGCACGGCGCGGACATCGTCGTCGAGAGCGCTACCAAATGGATTGGGG
GGCACGGGACGACGATTGGCGGGGTGATTGTGGATGCTGGCACGTTTGAC
TGGAGCAATGGAAAATTTCCACTTTTTACTGACCCTTCTCCTGGCTATCA
CGGCCTCAAATTTTGGGAGGTGTTCGGCGGTGAAAAGAGCATTTTGGGCT
TCAACGGTGCGTTTGCCATCCGTGCCCGCGTCGAGGGTCTCCGGGACTTT
GGTGCATGTCAGAATCCATTCGGCTCCTTTTTACTCCTGCAGGGTCTGGA
GACGCTCTCCTTGCGGGTTGAGCGCATTACACACAACGCCATGCATCTGG
CTCGCTGGCTGCAAACCCACCGAAGCGTTGCTTGGGTTCGCTACCCAGGA
CTGCCTGACCACGAGTCGCATGAACTGGCCAAGCAATATTTCAGACCAGG
AGTGTTCGGTCCCGTGCTGAGCTTCGGGGTGAGGGGTGGACGGGAAGGGG
GCATCATTTTTATCAACAGCTGCGTACTCGCTTCACACCTTGCCAACGTT
GGCGACGCCAAAACATTGGTCATCCATCCGGCTTCTACCACGCACCAGCA
GCTCACCGAGGCAGAGCAGGAAGGGAGTGGGGTGACAGCGGATATGATAA
GGGTTTCGGTGGGTATCGAGCACCTGGACGACATCAAAGATGACTTTGAC
CAGGCGCTGGAAAAGGCTACTAGAGCCTAG back to top
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