NO19G02210.1, NO19G02210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO19G02210.1
Unique NameNO19G02210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1380
Alignment locationchr19:630996..632375 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:630996..632375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G02210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02210NO19G02210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO19G02210.1NO19G02210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO19G02210.1.cds1NO19G02210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO19G02210.1 ID=NO19G02210.1|Name=NO19G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1380bp
ATGACAGCGGCACCAGCAGCAGCAGCGGGGGAGATGTTGATGGGAGGAGG
CGAGGAGGAGGGAGGGGGAGGAATCGATAATGGGAAAAGATTGCTTTGGA
GGAGGAAGATAGAGGCAGGAGGGGGAGGGAGGGGGCAAGGAAGGGATGCA
AACGGTCTGAGTGTTCCTCCTCCGATTTCGGATCGAGCCGCGGGTAAAAC
TCTCTCATGGCATGGCCTGCCCCCGGTCCCTCCCTTTCCTCCCCCCTTCC
CTTCCTCCTTTCCATCCATTTTCTCTTCCTCCTCTCCCTCCTCCTCTCTT
TCCTCCTCCTCATCAACCAACCCTCTCTTCCTATCTTCTTCCCGCTCCAC
CCCTGCCCCCTTCACTCCCTCCTTCCTCCCCCTCCTGCCTCCTCCTCCCC
CTCGACCACCCGTTATTCCCACCACCATTCTCCTCTCAGTCCGTCTCTCC
AATTTCCGCTTCCACTTCAAGCTACCCTCCAAACCCGACCTGCAGCTCGC
GCAGCGCCACCCTTCCTCCCTCCCTCCCCCCTCCTTATCGTCCACCTCTT
CCACCTCTTCCTCCTTCCCGTCCTCGGCTGAGCGATGGCTAGGACCGCTG
GCATCCGTTGCAACGTCTTGGTTGAAGGGACGCATTCGGCCTGGTGGAAA
AAGAGGAGAGGGGAAAGGAGGAGGAAAGTGGGACAGGGAGGGAGGAAGGG
GTGTAGGCGGAGAGGAGGAAGAAGAAGAAGAAGAAAAACAGGAAGAGGAG
GAAGAGGAGGAGGAAGAAGAGGAGGAAGAAGATAAAGAAGGAAAAGAGGA
GGGGGTGGAAGGAGAATTGTTCTATACACCTGCGAGAGATAACGCCGGCA
TCAAGATGGAAGATCTAGAGTCAGGAATAACCCTCTCTCCCTCCTCCCCT
CACCCCCTCACCAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGACTAAG
CGAAGACGAAGAAGGAGGAGGAGTACCCGGCCGCCAGATCCCTGCTGCCG
CTTCTTACGCCCCCTCATTCTCTCCCATGCACTCCTCCCGCATTAGCGCC
CCCCCTTTATCCTCCTCTTCTTCCTACTCCTCCTTCTCCGCCGAGGCCGA
GGTCGAAACCTTCCAGCAGCAGCAGCAGCAGCAGCAGGAGTCCCACCATT
CTTCTTGCCCCCCTGCTACCGATGCACGGAGGACCACCATCCCTCTCCCC
TCCCCTCTCATCCCCACTGAGGCCGACATCGGGTGGGTGATTGTTCTGAT
GCCCATCCCTTGCCAGGATCCCCTCACCGCCCACCGGCGCGTCGTTCTCC
TCGACTCTCTCGAGGCCTCACCCGCCGTCCCCCCCACCCTCTTTCCTTCT
CCTCCTCTTCCCCTCTTCTCTCCCTCATGA
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protein sequence of NO19G02210.1

>NO19G02210.1-protein ID=NO19G02210.1-protein|Name=NO19G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MTAAPAAAAGEMLMGGGEEEGGGGIDNGKRLLWRRKIEAGGGGRGQGRDA
NGLSVPPPISDRAAGKTLSWHGLPPVPPFPPPFPSSFPSIFSSSSPSSSL
SSSSSTNPLFLSSSRSTPAPFTPSFLPLLPPPPPRPPVIPTTILLSVRLS
NFRFHFKLPSKPDLQLAQRHPSSLPPPSLSSTSSTSSSFPSSAERWLGPL
ASVATSWLKGRIRPGGKRGEGKGGGKWDREGGRGVGGEEEEEEEEKQEEE
EEEEEEEEEEDKEGKEEGVEGELFYTPARDNAGIKMEDLESGITLSPSSP
HPLTRGGGRRGGGGGLSEDEEGGGVPGRQIPAAASYAPSFSPMHSSRISA
PPLSSSSSYSSFSAEAEVETFQQQQQQQQESHHSSCPPATDARRTTIPLP
SPLIPTEADIGWVIVLMPIPCQDPLTAHRRVVLLDSLEASPAVPPTLFPS
PPLPLFSPS*
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mRNA from alignment at chr19:630996..632375-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO19G02210.1 ID=NO19G02210.1|Name=NO19G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1380bp|location=Sequence derived from alignment at chr19:630996..632375- (Nannochloropsis oceanica)
ATGACAGCGGCACCAGCAGCAGCAGCGGGGGAGATGTTGATGGGAGGAGG
CGAGGAGGAGGGAGGGGGAGGAATCGATAATGGGAAAAGATTGCTTTGGA
GGAGGAAGATAGAGGCAGGAGGGGGAGGGAGGGGGCAAGGAAGGGATGCA
AACGGTCTGAGTGTTCCTCCTCCGATTTCGGATCGAGCCGCGGGTAAAAC
TCTCTCATGGCATGGCCTGCCCCCGGTCCCTCCCTTTCCTCCCCCCTTCC
CTTCCTCCTTTCCATCCATTTTCTCTTCCTCCTCTCCCTCCTCCTCTCTT
TCCTCCTCCTCATCAACCAACCCTCTCTTCCTATCTTCTTCCCGCTCCAC
CCCTGCCCCCTTCACTCCCTCCTTCCTCCCCCTCCTGCCTCCTCCTCCCC
CTCGACCACCCGTTATTCCCACCACCATTCTCCTCTCAGTCCGTCTCTCC
AATTTCCGCTTCCACTTCAAGCTACCCTCCAAACCCGACCTGCAGCTCGC
GCAGCGCCACCCTTCCTCCCTCCCTCCCCCCTCCTTATCGTCCACCTCTT
CCACCTCTTCCTCCTTCCCGTCCTCGGCTGAGCGATGGCTAGGACCGCTG
GCATCCGTTGCAACGTCTTGGTTGAAGGGACGCATTCGGCCTGGTGGAAA
AAGAGGAGAGGGGAAAGGAGGAGGAAAGTGGGACAGGGAGGGAGGAAGGG
GTGTAGGCGGAGAGGAGGAAGAAGAAGAAGAAGAAAAACAGGAAGAGGAG
GAAGAGGAGGAGGAAGAAGAGGAGGAAGAAGATAAAGAAGGAAAAGAGGA
GGGGGTGGAAGGAGAATTGTTCTATACACCTGCGAGAGATAACGCCGGCA
TCAAGATGGAAGATCTAGAGTCAGGAATAACCCTCTCTCCCTCCTCCCCT
CACCCCCTCACCAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGACTAAG
CGAAGACGAAGAAGGAGGAGGAGTACCCGGCCGCCAGATCCCTGCTGCCG
CTTCTTACGCCCCCTCATTCTCTCCCATGCACTCCTCCCGCATTAGCGCC
CCCCCTTTATCCTCCTCTTCTTCCTACTCCTCCTTCTCCGCCGAGGCCGA
GGTCGAAACCTTCCAGCAGCAGCAGCAGCAGCAGCAGGAGTCCCACCATT
CTTCTTGCCCCCCTGCTACCGATGCACGGAGGACCACCATCCCTCTCCCC
TCCCCTCTCATCCCCACTGAGGCCGACATCGGGTGGGTGATTGTTCTGAT
GCCCATCCCTTGCCAGGATCCCCTCACCGCCCACCGGCGCGTCGTTCTCC
TCGACTCTCTCGAGGCCTCACCCGCCGTCCCCCCCACCCTCTTTCCTTCT
CCTCCTCTTCCCCTCTTCTCTCCCTCATGA
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Coding sequence (CDS) from alignment at chr19:630996..632375-

>NO19G02210.1 ID=NO19G02210.1|Name=NO19G02210.1|organism=Nannochloropsis oceanica|type=CDS|length=1380bp|location=Sequence derived from alignment at chr19:630996..632375- (Nannochloropsis oceanica)
ATGACAGCGGCACCAGCAGCAGCAGCGGGGGAGATGTTGATGGGAGGAGG
CGAGGAGGAGGGAGGGGGAGGAATCGATAATGGGAAAAGATTGCTTTGGA
GGAGGAAGATAGAGGCAGGAGGGGGAGGGAGGGGGCAAGGAAGGGATGCA
AACGGTCTGAGTGTTCCTCCTCCGATTTCGGATCGAGCCGCGGGTAAAAC
TCTCTCATGGCATGGCCTGCCCCCGGTCCCTCCCTTTCCTCCCCCCTTCC
CTTCCTCCTTTCCATCCATTTTCTCTTCCTCCTCTCCCTCCTCCTCTCTT
TCCTCCTCCTCATCAACCAACCCTCTCTTCCTATCTTCTTCCCGCTCCAC
CCCTGCCCCCTTCACTCCCTCCTTCCTCCCCCTCCTGCCTCCTCCTCCCC
CTCGACCACCCGTTATTCCCACCACCATTCTCCTCTCAGTCCGTCTCTCC
AATTTCCGCTTCCACTTCAAGCTACCCTCCAAACCCGACCTGCAGCTCGC
GCAGCGCCACCCTTCCTCCCTCCCTCCCCCCTCCTTATCGTCCACCTCTT
CCACCTCTTCCTCCTTCCCGTCCTCGGCTGAGCGATGGCTAGGACCGCTG
GCATCCGTTGCAACGTCTTGGTTGAAGGGACGCATTCGGCCTGGTGGAAA
AAGAGGAGAGGGGAAAGGAGGAGGAAAGTGGGACAGGGAGGGAGGAAGGG
GTGTAGGCGGAGAGGAGGAAGAAGAAGAAGAAGAAAAACAGGAAGAGGAG
GAAGAGGAGGAGGAAGAAGAGGAGGAAGAAGATAAAGAAGGAAAAGAGGA
GGGGGTGGAAGGAGAATTGTTCTATACACCTGCGAGAGATAACGCCGGCA
TCAAGATGGAAGATCTAGAGTCAGGAATAACCCTCTCTCCCTCCTCCCCT
CACCCCCTCACCAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGACTAAG
CGAAGACGAAGAAGGAGGAGGAGTACCCGGCCGCCAGATCCCTGCTGCCG
CTTCTTACGCCCCCTCATTCTCTCCCATGCACTCCTCCCGCATTAGCGCC
CCCCCTTTATCCTCCTCTTCTTCCTACTCCTCCTTCTCCGCCGAGGCCGA
GGTCGAAACCTTCCAGCAGCAGCAGCAGCAGCAGCAGGAGTCCCACCATT
CTTCTTGCCCCCCTGCTACCGATGCACGGAGGACCACCATCCCTCTCCCC
TCCCCTCTCATCCCCACTGAGGCCGACATCGGGTGGGTGATTGTTCTGAT
GCCCATCCCTTGCCAGGATCCCCTCACCGCCCACCGGCGCGTCGTTCTCC
TCGACTCTCTCGAGGCCTCACCCGCCGTCCCCCCCACCCTCTTTCCTTCT
CCTCCTCTTCCCCTCTTCTCTCCCTCATGA
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Synonyms
Publications