NO19G02200.1, NO19G02200.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO19G02200.1
Unique NameNO19G02200.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1930
Alignment locationchr19:628740..630885 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:628740..630885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G02200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02200NO19G02200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO19G02200.1NO19G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO19G02200.1.cds1NO19G02200.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO19G02200.1.cds2NO19G02200.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO19G02200.1 ID=NO19G02200.1|Name=NO19G02200.1|organism=Nannochloropsis oceanica|type=mRNA|length=1930bp
ATGGAGGTAGCGGCAAGAGCAGAAGCACTCGCACAGACAGCCGCGGCTGC
AGCAGCGACAGCGGCAGCGGCAGCGGCAGCAGCGGCAACAGCGGCAACAA
CAACCGCAGCAGCAGTAGGTGTGAAAACAGTAGCGCCTACAGCAAGAGAG
AGTGGCAGATGGGAGGACAGTGAAAGGGTGTCAAGTAAGACTGCCTCTCC
CCAATCTCCTTGTGTACCGTCTGAGTGCACGAAACGAAGCGGTGACGATG
ACGAAGGCGAGGGCGAGGGCGAGGATGTGGAGGAGGGCAAGAGGGAGGGC
GAGGATGAGGAGGAGGGCAAGGGGGAGGGGGAGAGGGAGGAAGGGGCTGA
GTCCCACGCGATCGCTGCGGGGGCACCAACTCGAGCAGCGACGGCCGGTG
TGACGAAAGAGAAAAAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGAGG
GAAAACGAAAAAGAAGAGGAAGAAGGAGTAGTAGTAGTAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GATGGGGAAATGTAGAGGAATGGAAGCATGTGCATCGATACGCTTGGGCT
GACGTGCAGAAGAAGGGAGAGCTCAGGTTTCAGGGCATTGTCGTGCCTAC
TGGAGGGATGCATGTTGCGATCAAGTTCTTGGACAAACTAGGAGTCGATC
TCGGGCAAGGCGTGATTTGTCTCAAGGAGGTGGTGTCGAGGGGAAAAGGG
AGGGAGGGAGTGAGTGAGGGGGCGACGGAGGTGAGGGTGAAGTTGTCAGT
CGGAGGGATGGGGCTGGGGGAGATGGGGATGCTGGTAGTAGTGAAGAGCA
GGAAGAGGCATTCGATGGCGGAAGAGTGGGTGAGGAGTGGCTCCGCGGGG
GCCGCCGGAAGAGGAGGAGGAGAAGGAGAGGGGGGAGGAGAGGGAGGAGG
AAGAGGAAGAGGAAGAGGAGGACCATTAGGAGGAGGAGAGGGAGCAAAAC
GATCCGCAGGGACAGGAGAAGGAGGGGTTGGTGGAGCAGTAGGAGTAGAA
GAAGTAGCAGAATGTGAGATGTTGAAGGAGGAGGAGGAGCAGCAGCAGGA
AGAGGGAGAGGAGGAATGGGAGGAGAATGATGAGAAAGATGAGGAAGAGG
AAAAGGGAGTCTGGCGGCTGTGGGAGTAGGTAGAGGGTAAGGCACGGCAG
TCCGTGGGGTGGGAGAGGGCGAGCGAGAGAAGAAGAGTCAGGAGAAGGGC
GGAAGATTGGCCTGCGTTCAGGGGTGGAGATTTTGGTGCAAGAAAGCGAT
AGAGAGGAAGAGGGACGAGAAGAGGCAACAGCAAGAGAGGGAGAAATTAT
AAAAGGCGTCGGCTCGAAGGGAAGAGAGACAGGGAAGGAGGAAAGGGTCA
ACCGAGACGAGACATCTCGTCCGTGTACCGCAGAGGGTTTGAAAGCGCAG
GAAAGTCTTCCCTTAGAGTAAAGGCTGCAGCAGGAGCAGCATTAGCGAAT
GACAAATGAGAATATATGAAGAAGTAGGTAGTTTATAAATAGGGCGGAAG
ACGTCGAGAAAGGGCGAGAGAGATTTTAGTAGACATCGTGCGTTCCGGAA
AGACAAGGGCCGACGAAATAGGGAGAGTGTGTATGGATAATGACGACGAC
GATGTGAATGACCAGATGCACGCAATCGAAAGATGAAGCGTGTGATCGAA
TAGATGTATGCGAAAAAGACACAAGCGAAAAGGGGGACGATCTATGTGAT
GACGTCCATCCTTCGTTCCCTCCCTCTCTCCCCTCTCAACCTGTATCCGA
AGACACAAGTGAGAAAGGGAGCAAGAAGACTCTGAACAAACAAAAGAATA
AGGATAAGTGCAACAGAATATGCATTACCGCCGAATGAATTGCCAAGCCC
AGACTTATCTCTTTCTCATACTTCATCCTT
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protein sequence of NO19G02200.1

>NO19G02200.1-protein ID=NO19G02200.1-protein|Name=NO19G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=393bp
MEVAARAEALAQTAAAAAATAAAAAAAAATAATTTAAAVGVKTVAPTARE
SGRWEDSERVSSKTASPQSPCVPSECTKRSGDDDEGEGEGEDVEEGKREG
EDEEEGKGEGEREEGAESHAIAAGAPTRAATAGVTKEKKNEEEEEEEEER
ENEKEEEEGVVVVEEEEEEEEEEEEEEEEEEEEGWGNVEEWKHVHRYAWA
DVQKKGELRFQGIVVPTGGMHVAIKFLDKLGVDLGQGVICLKEVVSRGKG
REGVSEGATEVRVKLSVGGMGLGEMGMLVVVKSRKRHSMAEEWVRSGSAG
AAGRGGGEGEGGGEGGGRGRGRGGPLGGGEGAKRSAGTGEGGVGGAVGVE
EVAECEMLKEEEEQQQEEGEEEWEENDEKDEEEEKGVWRLWE*
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mRNA from alignment at chr19:628740..630885-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO19G02200.1 ID=NO19G02200.1|Name=NO19G02200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2146bp|location=Sequence derived from alignment at chr19:628740..630885- (Nannochloropsis oceanica)
ATGGAGGTAGCGGCAAGAGCAGAAGCACTCGCACAGACAGCCGCGGCTGC
AGCAGCGACAGCGGCAGCGGCAGCGGCAGCAGCGGCAACAGCGGCAACAA
CAACCGCAGCAGCAGTAGGTGTGAAAACAGTAGCGCCTACAGCAAGAGAG
AGTGGCAGATGGGAGGACAGTGAAAGGGTGTCAAGTAAGACTGCCTCTCC
CCAATCTCCTTGTGTACCGTCTGAGTGCACGAAACGAAGCGGTGACGATG
ACGAAGGCGAGGGCGAGGGCGAGGATGTGGAGGAGGGCAAGAGGGAGGGC
GAGGATGAGGAGGAGGGCAAGGGGGAGGGGGAGAGGGAGGAAGGGGCTGA
GTCCCACGCGATCGCTGCGGGGGCACCAACTCGAGCAGCGACGGCCGGTG
TGACGAAAGAGAAAAAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGAGG
GAAAACGAAAAAGAAGAGGAAGAAGGAGTAGTAGTAGTAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GATGGGGAAATGTAGAGGAATGGAAGCATGTGCATCGATACGCTTGGGCT
GACGTGCAGAAGAAGGGAGAGCTCAGGTGCATTGTTCGACCCCTTCCTCC
CTCCCTCCCTCCCTCCATTTTTCCTCACTTCTTTCCTCATCTTACTATCC
ACCTATCCATATACGAGCTGTACTCCCACTCTTCTCCTCTCTTTCTATCC
CTTTTCTTCTCCTCCTCTGCATCCGTCCAAGCTTCCTCCCTCCCTCACTC
CCACCCCCTCTTCCTCCCTTCCCCCTTCCCCCCCTCCCTTAGGTTTCAGG
GCATTGTCGTGCCTACTGGAGGGATGCATGTTGCGATCAAGTTCTTGGAC
AAACTAGGAGTCGATCTCGGGCAAGGCGTGATTTGTCTCAAGGAGGTGGT
GTCGAGGGGAAAAGGGAGGGAGGGAGTGAGTGAGGGGGCGACGGAGGTGA
GGGTGAAGTTGTCAGTCGGAGGGATGGGGCTGGGGGAGATGGGGATGCTG
GTAGTAGTGAAGAGCAGGAAGAGGCATTCGATGGCGGAAGAGTGGGTGAG
GAGTGGCTCCGCGGGGGCCGCCGGAAGAGGAGGAGGAGAAGGAGAGGGGG
GAGGAGAGGGAGGAGGAAGAGGAAGAGGAAGAGGAGGACCATTAGGAGGA
GGAGAGGGAGCAAAACGATCCGCAGGGACAGGAGAAGGAGGGGTTGGTGG
AGCAGTAGGAGTAGAAGAAGTAGCAGAATGTGAGATGTTGAAGGAGGAGG
AGGAGCAGCAGCAGGAAGAGGGAGAGGAGGAATGGGAGGAGAATGATGAG
AAAGATGAGGAAGAGGAAAAGGGAGTCTGGCGGCTGTGGGAGTAGGTAGA
GGGTAAGGCACGGCAGTCCGTGGGGTGGGAGAGGGCGAGCGAGAGAAGAA
GAGTCAGGAGAAGGGCGGAAGATTGGCCTGCGTTCAGGGGTGGAGATTTT
GGTGCAAGAAAGCGATAGAGAGGAAGAGGGACGAGAAGAGGCAACAGCAA
GAGAGGGAGAAATTATAAAAGGCGTCGGCTCGAAGGGAAGAGAGACAGGG
AAGGAGGAAAGGGTCAACCGAGACGAGACATCTCGTCCGTGTACCGCAGA
GGGTTTGAAAGCGCAGGAAAGTCTTCCCTTAGAGTAAAGGCTGCAGCAGG
AGCAGCATTAGCGAATGACAAATGAGAATATATGAAGAAGTAGGTAGTTT
ATAAATAGGGCGGAAGACGTCGAGAAAGGGCGAGAGAGATTTTAGTAGAC
ATCGTGCGTTCCGGAAAGACAAGGGCCGACGAAATAGGGAGAGTGTGTAT
GGATAATGACGACGACGATGTGAATGACCAGATGCACGCAATCGAAAGAT
GAAGCGTGTGATCGAATAGATGTATGCGAAAAAGACACAAGCGAAAAGGG
GGACGATCTATGTGATGACGTCCATCCTTCGTTCCCTCCCTCTCTCCCCT
CTCAACCTGTATCCGAAGACACAAGTGAGAAAGGGAGCAAGAAGACTCTG
AACAAACAAAAGAATAAGGATAAGTGCAACAGAATATGCATTACCGCCGA
ATGAATTGCCAAGCCCAGACTTATCTCTTTCTCATACTTCATCCTT
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Coding sequence (CDS) from alignment at chr19:628740..630885-

>NO19G02200.1 ID=NO19G02200.1|Name=NO19G02200.1|organism=Nannochloropsis oceanica|type=CDS|length=1179bp|location=Sequence derived from alignment at chr19:628740..630885- (Nannochloropsis oceanica)
ATGGAGGTAGCGGCAAGAGCAGAAGCACTCGCACAGACAGCCGCGGCTGC
AGCAGCGACAGCGGCAGCGGCAGCGGCAGCAGCGGCAACAGCGGCAACAA
CAACCGCAGCAGCAGTAGGTGTGAAAACAGTAGCGCCTACAGCAAGAGAG
AGTGGCAGATGGGAGGACAGTGAAAGGGTGTCAAGTAAGACTGCCTCTCC
CCAATCTCCTTGTGTACCGTCTGAGTGCACGAAACGAAGCGGTGACGATG
ACGAAGGCGAGGGCGAGGGCGAGGATGTGGAGGAGGGCAAGAGGGAGGGC
GAGGATGAGGAGGAGGGCAAGGGGGAGGGGGAGAGGGAGGAAGGGGCTGA
GTCCCACGCGATCGCTGCGGGGGCACCAACTCGAGCAGCGACGGCCGGTG
TGACGAAAGAGAAAAAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGAGG
GAAAACGAAAAAGAAGAGGAAGAAGGAGTAGTAGTAGTAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GATGGGGAAATGTAGAGGAATGGAAGCATGTGCATCGATACGCTTGGGCT
GACGTGCAGAAGAAGGGAGAGCTCAGGTTTCAGGGCATTGTCGTGCCTAC
TGGAGGGATGCATGTTGCGATCAAGTTCTTGGACAAACTAGGAGTCGATC
TCGGGCAAGGCGTGATTTGTCTCAAGGAGGTGGTGTCGAGGGGAAAAGGG
AGGGAGGGAGTGAGTGAGGGGGCGACGGAGGTGAGGGTGAAGTTGTCAGT
CGGAGGGATGGGGCTGGGGGAGATGGGGATGCTGGTAGTAGTGAAGAGCA
GGAAGAGGCATTCGATGGCGGAAGAGTGGGTGAGGAGTGGCTCCGCGGGG
GCCGCCGGAAGAGGAGGAGGAGAAGGAGAGGGGGGAGGAGAGGGAGGAGG
AAGAGGAAGAGGAAGAGGAGGACCATTAGGAGGAGGAGAGGGAGCAAAAC
GATCCGCAGGGACAGGAGAAGGAGGGGTTGGTGGAGCAGTAGGAGTAGAA
GAAGTAGCAGAATGTGAGATGTTGAAGGAGGAGGAGGAGCAGCAGCAGGA
AGAGGGAGAGGAGGAATGGGAGGAGAATGATGAGAAAGATGAGGAAGAGG
AAAAGGGAGTCTGGCGGCTGTGGGAGTAG
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Synonyms
Publications