NO19G01680.1, NO19G01680.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO19G01680.1
Unique NameNO19G01680.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1227
Alignment locationchr19:507062..508639 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:507062..508639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO19G01680.1 vs.
Match: AQT19707.1 (type two diacylglycerol acyltransferase [Nannochloropsis oceanica])

HSP 1 Score: 803.9 bits (2075), Expect = 2.300e-229
Identity = 403/408 (98.77%), Postives = 408/408 (100.00%), Query Frame = 0 
Query:    1 MGATTETQTKKTFVMRTVAVRNEDVALESATGDGAAGDATAGGLSRSILTEAPAASTSLSSRLAPSSAQASASPIMVRPEARPPGLLGRLQTLGAVVFLGLMGSSLYLVIASALYIVIGFGVLGHRICPSILLGVWVGQGLISVKVLHQDPEGIKRSWLFREMANFFDVTLVMEQKLDTSKKYLFAQHPHGILPLAPVLSAYFISDVVPGGGKIFCLIHSGIFYMPIVRFFMGEWGALPANKESVAEAKQQGQHCSIVVGGVAEIFLQNGETEQLQLRKGFIREALRNGYDLVPMFHFGATRMYNFIGPASFWRSLSNRLPFPFFLIGGWGKGMTLLPKPVRIVIAVGSPIGLAALYGVPEGQSVPDPDPAKVDLIYEEWKKHLAGLYYRQRPEWETRELEIWDCPKS 409
            MGATTETQTKKTFVMRTVAVRNED+ALE+ATGDGAAGDATAGGLSRSILTEAPAASTSLSSRLAPSSAQASASPIMVRPEARPPGLLGRLQTLGAVVFLGLMGSSLYLVIASALYIVIGFGVLGHRICPSILLGVWVGQGLISVKVLHQDPEGIKRSWLFREMANFFDVTLVMEQKLDTSKKYLFAQHPHGILPLAPVLSAYFISDVVPGGGKIFCLIHSG+FY+PIVRFFMGEWGALPANKESVAEAKQQGQHCSIVVGGVAEIFLQNGETEQLQLRKGFIREA+RNGYDLVPMFHFGATRMYNFIGPASFWRSLSNRLPFPFFLIGGWGKGMTLLPKPVRIVIAVGSPIGLAALYGVPEGQSVPDPDPAKVDLIYEEWKKHLAGLYYRQRPEWETRELEIWDCPKS
Sbjct:    1 MGATTETQTKKTFVMRTVAVRNEDIALEAATGDGAAGDATAGGLSRSILTEAPAASTSLSSRLAPSSAQASASPIMVRPEARPPGLLGRLQTLGAVVFLGLMGSSLYLVIASALYIVIGFGVLGHRICPSILLGVWVGQGLISVKVLHQDPEGIKRSWLFREMANFFDVTLVMEQKLDTSKKYLFAQHPHGILPLAPVLSAYFISDVVPGGGKIFCLIHSGMFYLPIVRFFMGEWGALPANKESVAEAKQQGQHCSIVVGGVAEIFLQNGETEQLQLRKGFIREAIRNGYDLVPMFHFGATRMYNFIGPASFWRSLSNRLPFPFFLIGGWGKGMTLLPKPVRIVIAVGSPIGLAALYGVPEGQSVPDPDPAKVDLIYEEWKKHLAGLYYRQRPEWETRELEIWDCPKS 408
The following BLAST results are available for this feature:
BLAST of NO19G01680.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
AQT19707.12.300e-22998.77type two diacylglycerol acyltransferase [Nannochlo... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01680NO19G01680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO19G01680.1NO19G01680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO19G01680.1.cds1NO19G01680.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO19G01680.1.cds2NO19G01680.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO19G01680.1.cds3NO19G01680.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO19G01680.1 ID=NO19G01680.1|Name=NO19G01680.1|organism=Nannochloropsis oceanica|type=mRNA|length=1227bp
ATGGGCGCTACCACCGAGACCCAGACTAAAAAGACGTTTGTAATGCGGAC
AGTCGCAGTACGAAACGAGGATGTAGCGCTGGAATCAGCGACAGGAGACG
GGGCAGCAGGGGATGCAACTGCTGGTGGCCTTTCACGCTCGATACTAACA
GAGGCTCCGGCGGCGTCCACTTCACTTTCATCGCGACTGGCACCGTCCTC
AGCACAAGCTTCAGCTTCGCCTATAATGGTTCGGCCCGAAGCACGCCCCC
CAGGTCTACTAGGCCGTCTACAAACGTTAGGTGCGGTGGTATTTTTGGGG
CTCATGGGATCCTCGCTGTACCTAGTGATAGCGTCTGCGCTTTACATCGT
GATTGGTTTCGGCGTATTGGGCCACCGTATTTGCCCTTCGATCTTACTGG
GGGTTTGGGTAGGACAAGGTCTAATTTCTGTCAAGGTGCTGCACCAAGAC
CCGGAAGGTATCAAGCGGTCGTGGCTCTTCCGAGAAATGGCTAACTTTTT
TGATGTGACATTGGTGATGGAGCAGAAATTGGACACTTCCAAGAAGTACT
TGTTCGCACAGCATCCGCACGGTATCCTTCCTCTCGCCCCCGTGTTGTCC
GCTTACTTTATCTCGGACGTGGTGCCCGGCGGAGGCAAGATTTTCTGTTT
GATACATAGCGGAATATTCTACATGCCCATCGTCCGATTTTTCATGGGCG
AATGGGGTGCGCTCCCCGCAAACAAGGAGTCTGTCGCCGAAGCCAAGCAA
CAAGGACAGCATTGCTCCATCGTCGTCGGCGGGGTCGCAGAGATTTTCCT
TCAAAACGGAGAGACCGAACAACTGCAACTCAGGAAGGGTTTTATTCGTG
AGGCGCTTCGCAACGGATATGACCTTGTGCCCATGTTCCATTTTGGAGCC
ACGCGCATGTATAATTTTATCGGCCCCGCCTCATTTTGGCGGTCCTTGTC
AAACCGCCTGCCGTTTCCCTTCTTTCTGATTGGGGGATGGGGGAAAGGAA
TGACCCTGCTTCCCAAACCCGTGCGTATCGTTATTGCTGTTGGCTCACCA
ATAGGTCTGGCGGCTCTGTATGGCGTGCCGGAAGGACAGTCGGTGCCTGA
TCCAGACCCGGCGAAGGTGGATTTGATTTATGAGGAGTGGAAGAAGCATT
TGGCAGGCCTTTATTATCGGCAGCGACCTGAGTGGGAGACGCGAGAGTTG
GAGATTTGGGACTGTCCGAAGTCGTGA
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protein sequence of NO19G01680.1

>NO19G01680.1-protein ID=NO19G01680.1-protein|Name=NO19G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MGATTETQTKKTFVMRTVAVRNEDVALESATGDGAAGDATAGGLSRSILT
EAPAASTSLSSRLAPSSAQASASPIMVRPEARPPGLLGRLQTLGAVVFLG
LMGSSLYLVIASALYIVIGFGVLGHRICPSILLGVWVGQGLISVKVLHQD
PEGIKRSWLFREMANFFDVTLVMEQKLDTSKKYLFAQHPHGILPLAPVLS
AYFISDVVPGGGKIFCLIHSGIFYMPIVRFFMGEWGALPANKESVAEAKQ
QGQHCSIVVGGVAEIFLQNGETEQLQLRKGFIREALRNGYDLVPMFHFGA
TRMYNFIGPASFWRSLSNRLPFPFFLIGGWGKGMTLLPKPVRIVIAVGSP
IGLAALYGVPEGQSVPDPDPAKVDLIYEEWKKHLAGLYYRQRPEWETREL
EIWDCPKS*
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mRNA from alignment at chr19:507062..508639-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO19G01680.1 ID=NO19G01680.1|Name=NO19G01680.1|organism=Nannochloropsis oceanica|type=mRNA|length=1578bp|location=Sequence derived from alignment at chr19:507062..508639- (Nannochloropsis oceanica)
ATGGGCGCTACCACCGAGACCCAGACTAAAAAGACGTTTGTAATGCGGAC
AGTCGCAGGTACGTTGTGGGGCGAGAAAAAAGGTGCCTCCGCTTGGAGGA
ATACGACTACCCCTTGTTGGGAGGGGAGAGGGTTGTATAGAACCAAAAAA
CTGTGGCCTCTATTACATTTATTTTTCTTACCCAGTACGAAACGAGGATG
TAGCGCTGGAATCAGCGACAGGAGACGGGGCAGCAGGGGATGCAACTGCT
GGTGGCCTTTCACGCTCGATACTAACAGAGGCTCCGGCGGCGTCCACTTC
ACTTTCATCGCGACTGGCACCGTCCTCAGCACAAGCTTCAGCTTCGCCTA
TAATGGTTCGGCCCGAAGCACGCCCCCCAGGTCTACTAGGCCGTCTACAA
ACGTTAGGTGCGGTGGTATTTTTGGGGCTCATGGGATCCTCGCTGTACCT
AGTGATAGCGTCTGCGCTTTACATCGTGATTGGTTTCGGCGTATTGGGCC
ACCGTATTTGCCCTTCGATCTTACTGGGGGTTTGGGTAGGACAAGGTCTA
ATTTCTGTCAAGGTGCTGCACCAAGACCCGGAAGGTATCAAGCGGTCGTG
GCTCTTCCGAGAAATGGCTAACTTTTTTGATGTGACATTGGTGATGGAGC
AGAAATTGGACACTTCCAAGAAGTACTTGTTCGCACAGCATCCGCACGGT
ATCCTTCCTCTCGCCCCCGTGTTGTCCGCTTACTTTATCTCGGACGTGGT
GCCCGGCGGAGGCAAGATTTTCTGTTTGATACATAGGTAAGGAAATGCGT
GCGCATACTGCCGGCATCCTAAGGGGGGAAAGAGGAAGCAGGGAAAGAAA
CGCGGGTGGTTGAAACCATGACTATCATCATGTAGATTTGTCGAGGGAAC
ATAATAAATTAATTATTAATTCAGGTGCAGCATGTACCACCCACTATCTT
GCAGACATTCTCATCTCGTCTCTACCGATCTCTCCCCACCTCGCCAACAC
ACACTTTTAGCGGAATATTCTACATGCCCATCGTCCGATTTTTCATGGGC
GAATGGGGTGCGCTCCCCGCAAACAAGGAGTCTGTCGCCGAAGCCAAGCA
ACAAGGACAGCATTGCTCCATCGTCGTCGGCGGGGTCGCAGAGATTTTCC
TTCAAAACGGAGAGACCGAACAACTGCAACTCAGGAAGGGTTTTATTCGT
GAGGCGCTTCGCAACGGATATGACCTTGTGCCCATGTTCCATTTTGGAGC
CACGCGCATGTATAATTTTATCGGCCCCGCCTCATTTTGGCGGTCCTTGT
CAAACCGCCTGCCGTTTCCCTTCTTTCTGATTGGGGGATGGGGGAAAGGA
ATGACCCTGCTTCCCAAACCCGTGCGTATCGTTATTGCTGTTGGCTCACC
AATAGGTCTGGCGGCTCTGTATGGCGTGCCGGAAGGACAGTCGGTGCCTG
ATCCAGACCCGGCGAAGGTGGATTTGATTTATGAGGAGTGGAAGAAGCAT
TTGGCAGGCCTTTATTATCGGCAGCGACCTGAGTGGGAGACGCGAGAGTT
GGAGATTTGGGACTGTCCGAAGTCGTGA
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Coding sequence (CDS) from alignment at chr19:507062..508639-

>NO19G01680.1 ID=NO19G01680.1|Name=NO19G01680.1|organism=Nannochloropsis oceanica|type=CDS|length=1227bp|location=Sequence derived from alignment at chr19:507062..508639- (Nannochloropsis oceanica)
ATGGGCGCTACCACCGAGACCCAGACTAAAAAGACGTTTGTAATGCGGAC
AGTCGCAGTACGAAACGAGGATGTAGCGCTGGAATCAGCGACAGGAGACG
GGGCAGCAGGGGATGCAACTGCTGGTGGCCTTTCACGCTCGATACTAACA
GAGGCTCCGGCGGCGTCCACTTCACTTTCATCGCGACTGGCACCGTCCTC
AGCACAAGCTTCAGCTTCGCCTATAATGGTTCGGCCCGAAGCACGCCCCC
CAGGTCTACTAGGCCGTCTACAAACGTTAGGTGCGGTGGTATTTTTGGGG
CTCATGGGATCCTCGCTGTACCTAGTGATAGCGTCTGCGCTTTACATCGT
GATTGGTTTCGGCGTATTGGGCCACCGTATTTGCCCTTCGATCTTACTGG
GGGTTTGGGTAGGACAAGGTCTAATTTCTGTCAAGGTGCTGCACCAAGAC
CCGGAAGGTATCAAGCGGTCGTGGCTCTTCCGAGAAATGGCTAACTTTTT
TGATGTGACATTGGTGATGGAGCAGAAATTGGACACTTCCAAGAAGTACT
TGTTCGCACAGCATCCGCACGGTATCCTTCCTCTCGCCCCCGTGTTGTCC
GCTTACTTTATCTCGGACGTGGTGCCCGGCGGAGGCAAGATTTTCTGTTT
GATACATAGCGGAATATTCTACATGCCCATCGTCCGATTTTTCATGGGCG
AATGGGGTGCGCTCCCCGCAAACAAGGAGTCTGTCGCCGAAGCCAAGCAA
CAAGGACAGCATTGCTCCATCGTCGTCGGCGGGGTCGCAGAGATTTTCCT
TCAAAACGGAGAGACCGAACAACTGCAACTCAGGAAGGGTTTTATTCGTG
AGGCGCTTCGCAACGGATATGACCTTGTGCCCATGTTCCATTTTGGAGCC
ACGCGCATGTATAATTTTATCGGCCCCGCCTCATTTTGGCGGTCCTTGTC
AAACCGCCTGCCGTTTCCCTTCTTTCTGATTGGGGGATGGGGGAAAGGAA
TGACCCTGCTTCCCAAACCCGTGCGTATCGTTATTGCTGTTGGCTCACCA
ATAGGTCTGGCGGCTCTGTATGGCGTGCCGGAAGGACAGTCGGTGCCTGA
TCCAGACCCGGCGAAGGTGGATTTGATTTATGAGGAGTGGAAGAAGCATT
TGGCAGGCCTTTATTATCGGCAGCGACCTGAGTGGGAGACGCGAGAGTTG
GAGATTTGGGACTGTCCGAAGTCGTGA
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Synonyms
Publications