NO19G01510.1, NO19G01510.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO19G01510.1
Unique NameNO19G01510.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length653
Alignment locationchr19:462443..463349 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:462443..463349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01510.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01510NO19G01510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO19G01510.1NO19G01510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO19G01510.1.cds1NO19G01510.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO19G01510.1.cds2NO19G01510.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO19G01510.1 ID=NO19G01510.1|Name=NO19G01510.1|organism=Nannochloropsis oceanica|type=mRNA|length=653bp
ATGACGGGGAGGAGGAGGGGAGGAGAAGGGGAGGAGGGGGAGAAGGAGCA
GTGGAGGAGGGGAGGAGGAGGGGAGGAGAAGGGGAGGAGAAGGGGAGGAG
AAGGGGAGAAGAAGGGGAGGAGAAGGGGAGGAGGGGGAGAAGGAACAGTG
GAGGATGCGGTGAAGGTAGAGGAGGCAGATAAAGGGAGGAAGGAGGTTGG
AGGAGGTGTAGACGGGGAGGAGGAGGGGAGGAGGGGAGGAAGAGGGGAGG
AGGGGAGGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGAGGGGAGGA
GGGGAGGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGGGAGGAGGGG
AGGAGGGGGGGGGCGGAGAGATGCGGAAGAGACAGAAGGAGGCGGAGAAG
GTGAGGCGGAGAAGGCGGAGAAGGGGAGGAAGCGGAGGGGGAGGAGGGAG
AGGACTCGGGGCACAGAGATGCGGAAGAAGGAGGTGGAGGGAGGCGGAGG
GGGAGGAGGAGGCAGAAGGAAAAGGAAATAGGCGGAGGGGGAGGAGGAGG
CGGACAGGGAAAGGAAATAGGCGAAGGGGGGAGGAAGGAGGCAAGGCTAA
GTTTTTTGCTCTTTTTACTTTTTTGATGTTTTAATCACCATAACGAGCCT
TGT
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protein sequence of NO19G01510.1

>NO19G01510.1-protein ID=NO19G01510.1-protein|Name=NO19G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=177bp
MTGRRRGGEGEEGEKEQWRRGGGGEEKGRRRGGEGEKKGRRRGGGGEGTV
EDAVKVEEADKGRKEVGGGVDGEEEGRRGGRGEEGRRRGGGEEEGRRRGG
GEEEGRRGGGGEEGRRGGGGGRRDAEETEGGGEGEAEKAEKGRKRRGRRE
RTRGTEMRKKEVEGGGGGGGGRRKRK*
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mRNA from alignment at chr19:462443..463349-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO19G01510.1 ID=NO19G01510.1|Name=NO19G01510.1|organism=Nannochloropsis oceanica|type=mRNA|length=907bp|location=Sequence derived from alignment at chr19:462443..463349- (Nannochloropsis oceanica)
ATGGTGGGGTCAAGCGAAGAGGTGTCGAGAACAACGCTGCTGCCCTCCCC
TCGGGCAATGAGGTCGCGAAAAAGCAAGGGTAGAGGCGGATAAACGACAA
GAGGACGGGACGGAGGTGCAAGTGGACGACAAAGGAGAGGAGGGGGAGGA
AAAACACTTTTCAGAGGAGGACATTCGTGATACAATGGGCAGATGGAGCG
CCCTAAGGTAAAAGTTTTTGCGGATGCTTTCAAGGAAGGAGGTCGGAGGA
GGTGTAGACGGGGAGGAGGAGGGGAGGAGAAGGGGAGGAGGGGGAGAAGG
AGCAGTGGAGGAGGGGAGGAGGAGGGGAGGAGAAGGGGAGGAGAAGGGGA
GGAGAAGGGGAGAAGAAGGGGAGGAGAAGGGGAGGAGGGGGAGAAGGAAC
AGTGGAGGATGCGGTGAAGGTAGAGGAGGCAGATAAAGGGAGGAAGGAGG
TTGGAGGAGGTGTAGACGGGGAGGAGGAGGGGAGGAGGGGAGGAAGAGGG
GAGGAGGGGAGGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGAGGGG
AGGAGGGGAGGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGGGAGGA
GGGGAGGAGGGGGGGGGCGGAGAGATGCGGAAGAGACAGAAGGAGGCGGA
GAAGGTGAGGCGGAGAAGGCGGAGAAGGGGAGGAAGCGGAGGGGGAGGAG
GGAGAGGACTCGGGGCACAGAGATGCGGAAGAAGGAGGTGGAGGGAGGCG
GAGGGGGAGGAGGAGGCAGAAGGAAAAGGAAATAGGCGGAGGGGGAGGAG
GAGGCGGACAGGGAAAGGAAATAGGCGAAGGGGGGAGGAAGGAGGCAAGG
CTAAGTTTTTTGCTCTTTTTACTTTTTTGATGTTTTAATCACCATAACGA
GCCTTGT
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Coding sequence (CDS) from alignment at chr19:462443..463349-

>NO19G01510.1 ID=NO19G01510.1|Name=NO19G01510.1|organism=Nannochloropsis oceanica|type=CDS|length=531bp|location=Sequence derived from alignment at chr19:462443..463349- (Nannochloropsis oceanica)
ATGACGGGGAGGAGGAGGGGAGGAGAAGGGGAGGAGGGGGAGAAGGAGCA
GTGGAGGAGGGGAGGAGGAGGGGAGGAGAAGGGGAGGAGAAGGGGAGGAG
AAGGGGAGAAGAAGGGGAGGAGAAGGGGAGGAGGGGGAGAAGGAACAGTG
GAGGATGCGGTGAAGGTAGAGGAGGCAGATAAAGGGAGGAAGGAGGTTGG
AGGAGGTGTAGACGGGGAGGAGGAGGGGAGGAGGGGAGGAAGAGGGGAGG
AGGGGAGGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGAGGGGAGGA
GGGGAGGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGGGAGGAGGGG
AGGAGGGGGGGGGCGGAGAGATGCGGAAGAGACAGAAGGAGGCGGAGAAG
GTGAGGCGGAGAAGGCGGAGAAGGGGAGGAAGCGGAGGGGGAGGAGGGAG
AGGACTCGGGGCACAGAGATGCGGAAGAAGGAGGTGGAGGGAGGCGGAGG
GGGAGGAGGAGGCAGAAGGAAAAGGAAATAG
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Synonyms
Publications