NO19G01330.1, NO19G01330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G01330.1
Unique Name	NO19G01330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4621
Alignment location	chr19:414897..419782 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:414897..419782 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO19G01330.1 vs.
Match: EWM23641.1 (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 496.9 bits (1278), Expect = 7.300e-137
Identity = 273/449 (60.80%), Postives = 343/449 (76.39%), Query Frame = 0

Query:    1 MEVRAEILEALHN--AAADIDESTDEEKLEKLRL---NGFCNDLEAPLPASSALSSSAHATPSVAPASCTLFIIVAALVSVGTVLTIITKLMTIPMANYTSALTLQTVFAFIPLTFIHIGFKHKMGKLLRADFFYPWKPVVIISILYALGQFLFIFGTQFTSGPIQVIISQSAIPFSMGISHLMLGSNYRRRHYIGAVLVVLGIILAVGGSLASEQIDAFEAGWIVGYILSMVPPVIYTVYSESLFKERATPPDPVIFTGLISTIQFFFLCLLAPIFPYLEQPPSTLSSLLPSLLAGGKCLVGINTLPSDDCWPLAPSLVLTYNILNIVLLYPTFALLDRGSSNVFWLACTLIVPFSGFAFSLPVIPDAQPVTLENSLALLVIVLGLGTYGFSTKTAEAGLAYIRRA----LSGQRAIASDSDNLLTRLEMVSLPSSSSSSSSSSSSST 441
            MEVR +IL A H+  AA+ +DE   E+   +  L        DLEA +P S  L  +     ++  ASC LF IV A+V +GT+LT+ITK+MT+PMANYT+ALTLQT FA++PLT I++ FK K GKL  AD  YPW+PV  ++ LYA+GQ L I+GTQ+TSGP+QVI+SQSAIPFSMGISH+MLGS YR RHY+GAVLV+LGI+LAVGGSLA E++  FEAGWIVGY+LS +P VIYTVY ESL++ RA PPDPVIFTG+IS +QF FLCLLAP  PYL++P + +SSL  SL+AGGKCLVGINTLP+DDCWPLAP LVL+YN+LN+VLLYPTFALL+ GSSN+FWLACTLIVPFSGFAFSLP IP A+PVT+E  L+LLVIV GLG YG+S ++A  G+  +++A     S +  +    +N    +EM  L ++ SS S+S SSS+
Sbjct:    1 MEVREQILGAPHSQDAASGVDELLSEDATAQGDLPDGKRETRDLEASIP-SLLLGEAPRNRRNLVVASCALFFIVLAVVLLGTLLTVITKVMTVPMANYTAALTLQTTFAYVPLTLIYMLFKWKAGKLAYADLIYPWRPVTAVACLYAVGQILLIYGTQYTSGPMQVILSQSAIPFSMGISHMMLGSTYRCRHYVGAVLVLLGILLAVGGSLAQEKVGRFEAGWIVGYVLSWIPYVIYTVYGESLYRSRARPPDPVIFTGIISAVQFLFLCLLAPTLPYLKRPSAPVSSLPASLIAGGKCLVGINTLPTDDCWPLAPILVLSYNVLNVVLLYPTFALLEHGSSNLFWLACTLIVPFSGFAFSLPFIPGAEPVTVEEGLSLLVIVFGLGIYGWSKESAVRGVEALKQAAPKRTSKKPLVGVGVENPEVSVEMAPLDATCSSFSTSLSSSS 448

The following BLAST results are available for this feature:

BLAST of NO19G01330.1 vs.

BLAST of NO19G01330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM23641.1	7.300e-137	60.80	Transmembrane transporter protein, chloroquine res...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO19G01330	NO19G01330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO19G01330.1	NO19G01330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO19G01330.1.cds1	NO19G01330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G01330.1.cds2	NO19G01330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr19:414897..419782-
coding sequence from alignment at chr19:414897..419782-

mRNA sequence

>NO19G01330.1 ID=NO19G01330.1|Name=NO19G01330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4621bp
ATTGTTACTTTTTTATCTACGTCTTTCTACCATGCACTTCGACACTACCT
CTCTACTCGGTGGATTGCGACCGATTCCATTGCGCGGTGGTCAGCGCATT
CATTCCAGCCTCTTTATCGCACGCAATGCGCATGGTAGGGCAGGGCAGCC
CAGCCCCAGCCCAGCCTCGGCAATATATATCCCCGCATAAATAATCTCGC
TTCCACTAATCAGACACGGCAACCAATCTTGAGCACAGATGCGGCGCTGA
GGTGAAATGGAGGTGCGAGCAGAGATCTTGGAGGCGCTGCATAATGCGGC
GGCAGACATAGACGAGTCCACCGATGAAGAAAAGCTTGAAAAACTCCGCC
TGAATGGCTTCTGTAATGATTTGGAAGCCCCCTTACCAGCTTCCTCCGCC
CTCTCCTCCTCTGCCCACGCCACACCTAGCGTGGCCCCAGCCTCCTGCAC
TCTCTTCATCATCGTCGCCGCCCTCGTCTCTGTCGGGACCGTCCTAACGA
TTATCACCAAACTCATGACGATACCGATGGCTAATTACACTTCGGCTCTC
ACCCTTCAAACCGTCTTCGCCTTTATTCCTCTCACCTTCATCCACATTGG
CTTCAAACACAAAATGGGCAAATTGCTCCGTGCAGATTTCTTCTACCCCT
GGAAGCCTGTCGTGATTATCTCCATCCTTTACGCCCTCGGCCAGTTTCTC
TTCATTTTTGGAACACAATTCACCAGCGGCCCAATACAAGTCATTATATC
TCAATCAGCCATTCCATTTAGCATGGGCATTTCGCATTTAATGCTTGGCT
CGAACTACAGGAGAAGACATTACATAGGAGCCGTACTCGTCGTTCTCGGC
ATCATCCTCGCAGTCGGTGGCTCTCTTGCCAGCGAACAAATCGATGCATT
CGAAGCAGGATGGATTGTTGGCTACATACTCTCTATGGTGCCCCCGGTTA
TTTACACGGTCTACAGCGAGAGCCTCTTCAAAGAGAGAGCTACCCCTCCT
GACCCTGTCATTTTTACGGGGCTAATCTCCACCATTCAATTTTTCTTCCT
CTGCCTTCTTGCTCCCATCTTTCCCTACCTCGAACAACCTCCATCTACCC
TCTCTTCTCTCCTTCCCTCGCTCCTCGCGGGGGGGAAGTGCTTGGTAGGG
ATAAATACATTGCCTTCGGACGACTGCTGGCCCCTTGCTCCCTCCCTCGT
CCTCACCTACAACATTTTAAATATTGTCTTACTCTACCCCACGTTCGCCT
TGCTTGACCGCGGGTCATCAAATGTCTTCTGGCTCGCCTGCACACTGATT
GTACCCTTTTCGGGATTTGCTTTCTCCCTTCCCGTAATCCCCGACGCCCA
ACCAGTGACACTTGAGAACAGCCTCGCGCTCTTGGTCATTGTGCTCGGCT
TGGGGACCTACGGTTTCTCCACGAAAACGGCTGAGGCGGGGTTAGCATAC
ATAAGACGAGCTTTATCGGGGCAGAGAGCCATTGCCAGCGATAGTGACAA
TTTGCTGACAAGGCTCGAGATGGTCTCTCTTCCTTCGTCCTCCTCTTCCT
CCTCGTCTTCCTCCTCCTCCTCCACCACGGCAACCGTCTCCATCATGTCC
TCCTTCTCCTCCCTTCCTTCTCCACTCTCGCCCTCAACGCCACAGGTACG
CCAACGAGGGCCGAATGAAAAGAAGAAGGAAGAGAATGTGGCCAGCACTT
TGCCGTCTCCCTTCCTTCCCACCGGCGCCGGAAGAGGATAGGGAGGAGAG
AGAGAGAGAGAGCGAGAGAGGGCGAGAGAGAGAGATGTGGTTAGGGATGG
ACGATGAGGAGTGAAGGAGGAAAGAATACATTTTGACGAGTAACAATGAT
TCATCTCTATCTCCGAGTATCCTGCAGAGGGCTGTGTCGTGTCTGGCCCA
TACGCCTAGCAAGAAAACCCCAACCTTAGCCGACAACTCAAACTGTATGT
AAACACCGATCCAAGAAAGAAAAGGGGCATTAGACATGATTGAATGAGTA
TCTTAAATGAATACGCTTCCTCTTCTCAATGCCAGAGCTGTCTTTCTCTG
TTGGAACTTGTTTGAATAAAGCCGACCGTTCCCGATATCTGTGTCTTTGT
CTTGTCTTCGCCAGGCGCTGTTGTTTGTTGCTCTTTTTCTCGAAGCCATA
TTCACATGCATGCACAAATCCTTTCCTCCCTGCCATCATCCATCCCTTCC
TCCCTACCTACCTACCTCCGTCGTGGTCTTCACAACTCCGCCGTTTCCAA
CCATACTTCCCTACGCCCCAACTCCTCCGTGTCGTCCTCTCTTTCTCTCC
CACTTCTCCTCCTCCTCCTTTCCGCCACCCTCCTCAACAACGTCCACACA
CCCTCCTCATTCCATTCGTCTTTCTCCATCGCTCTTTCAGCCAATAATCT
CCGACCCAAATTTAAATCAGTGTCCATTTTTAAACACGCACTAATCAGTG
TTAATTTCAGCACATCCCTCTGTGCATGCGAGCCTCCAATCAAATGCCAC
CGACTCGAGGAAGAGGAAAGCAACTTTACAGTTTGGGAATAATTGCCTTG
TACATAATGAATTAAGGCCTCACTTATGTCCAATCCCACTTCAGAGAGAA
CGTAGCTGTTCGTGGGTTGCGGGAGGAGGAAGGGCAACCCGGAGGAGGAG
GAAGAAGAGAAGTGTCGTGCCTGTCTCTTTTTCCCTCCTTCCCTCCCTCC
CTCCCTCTCCTCCTCCCGAAAGGTCCGTTGAAGCCAGTCAGATAATGTGG
GTATTTTCAACACTCGCACAAGCTGTCCTATCCCATAGACAACCTCCCAC
CATCGAGGCCATTGCTCTTGTTGTACGTGCTGCTGCCTCAGTTCCCTGAG
TTGCTGCTTGAGCTGCTGCTGTTGTTGGGGTAGGCTGGCAGCAGCGTGTC
TCTTCATGGATGAGAGAGAGGCTTTGGCGGCGGGGATGTCAGTGACTGAG
AGACACATCATCATGTGGACGTCATTAAAGCTAGTGGTGTGCATGGTCTC
GTACCCCCCATCCCCATACCACGTCCGCAATTCCTCCCATTTCCTCCTCT
CCCGCCCTCTCTCCTTGCCTCCCCCCCTCTCTCCCTCCTCCTCTCCCTCG
TCCTCCATCAACATCATTCTCCACAACAAGCTTGCCGCGTCTGCCAAGGC
CAACGGCGTCGCCGGTGCCACTGTCCCTCCCTCCTTCCCCCCCTCCTTCA
ATAACACTCCATCCAACACCTCCCACACAATCCCCTCCTCTCTCCCCAAC
GCCAACACAGCCCGATGCCAGGCCACGTGGTTAGTGAAAAGGGAAGGAAG
GTCTTCCCATTTTCCCTTGAATTCTTTGTAGATTTTTTCCCCTTCTTCTC
TCCTACCTGTCATTTCGTAGGTATGTATCAAGGCATGTAAAGCAGTTACA
TCTGTAGCGTCTTCCGACAGGACTTGACGGGCTACAAGGGCGGCACGGTT
CAGATCGCCTGTTTCTTCCAAGGCGAAAGCCCACATACTTCGAACCATAC
GGTAATCATTCTCCACCTTCGCCTCCTTCTCCTTCTCCTCCTTCTCCTTT
TGGGGCTCCGAACGTTTCTCGTCCTCCAATGCTTCCTCCCTCCCATTCAC
CCTTTCCTCCCCCAAGTCCCATCGACTCAACACCCTGGCCAAGCTCCTCT
TCATTCCCTCGCTATCCCCTAAAATAATGTACGCGTCATGGACACTCCTT
ACCGCCAACAATTCCCGAGGGTTCATTGCTAAGACCTCTTCCCAATACAT
GGCGGCAAGTGCGAAATCAGGAGTGGGCGGGTAATACAGGGCATGAAACG
CGAGATAATACCAACGTTCACGAGCTGTTGGGCTTGAATACGGGTACTCT
TGCTGTTGCTGTTGGTGCTGCTGGTGGCGCAGCTGTTGCTCATGGGAAAG
GTGGTGGGAGGGAGGGAGGTCCATGAAGAAGGCAGCAGCGGCGTGATAGC
TTTCTCGGACAAGTGGGCTATTTTTTAGCACACCTGTCGACAACAGAAGG
ATGGAACCTCGGTATATATGTGCCATCAAATATGAGGATGACGAATTGAG
GGAGAGAGAGAAAGGGGTGCTGGTGGTGAGCTCCAAGAGGGGTTCAAGCA
CCTGGCCTCGCAGCCCCGCATAAGACCGGACAGCTTCATTGAAGAGTGTG
ATAGCCTCGGGGGGGACAGGTGTGGAAATGGGACCCCAGGCATCGGATGT
ACGAAGATCAGATGGAACCGAGGGAAAGGATTGAGTAGAAGAAGTGGTGC
TGCTGGAAGAGGGATAGCCGATGGCGTCACGCGAGGAGGCGAAGGTCAAC
ACGGCCACGATGTACACAGACATGAAGAGGCGCAGCGCAGCCAGGGCGGG
AAGAAGGCCAAGGTATGGTGGTCTAGCCATGAATGTGCGTAGCCTCTGCG
GTGTGTAGGGTGGGTCAGAAAGGTACTGCTGCTTTCTTGCTTAAGGAACG
AAGCTTGAAGCAAATCAGCGATTGACGGCAACCAACACACAACTCGCAAG
CGTGCCTGCCCACGAGGGTTTTAGCTCTACGCTTGTCCTTGATAGTCACG
CATGAGTAGGCTGGACGTCCAGGAACGCAAGGTCGATGTTCTTGCATGTA
TTTGTACTTCCCATCTCCTCC

protein sequence of NO19G01330.1

>NO19G01330.1-protein ID=NO19G01330.1-protein|Name=NO19G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MEVRAEILEALHNAAADIDESTDEEKLEKLRLNGFCNDLEAPLPASSALS
SSAHATPSVAPASCTLFIIVAALVSVGTVLTIITKLMTIPMANYTSALTL
QTVFAFIPLTFIHIGFKHKMGKLLRADFFYPWKPVVIISILYALGQFLFI
FGTQFTSGPIQVIISQSAIPFSMGISHLMLGSNYRRRHYIGAVLVVLGII
LAVGGSLASEQIDAFEAGWIVGYILSMVPPVIYTVYSESLFKERATPPDP
VIFTGLISTIQFFFLCLLAPIFPYLEQPPSTLSSLLPSLLAGGKCLVGIN
TLPSDDCWPLAPSLVLTYNILNIVLLYPTFALLDRGSSNVFWLACTLIVP
FSGFAFSLPVIPDAQPVTLENSLALLVIVLGLGTYGFSTKTAEAGLAYIR
RALSGQRAIASDSDNLLTRLEMVSLPSSSSSSSSSSSSSTTATVSIMSSF
SSLPSPLSPSTPQVRQRGPNEKKKEENVASTLPSPFLPTGAGRG*

mRNA from alignment at chr19:414897..419782-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO19G01330.1 ID=NO19G01330.1|Name=NO19G01330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4886bp|location=Sequence derived from alignment at chr19:414897..419782- (Nannochloropsis oceanica)
ATTGTTACTTTTTTATCTACGTCTTTCTACCATGCACTTCGACACTACCT
CTCTACTCGGTGGATTGCGACCGATTCCATTGCGCGGTGGTCAGCGCATT
CATTCCAGCCTCTTTATCGCACGCAATGCGCATGGTAGGGCAGGGCAGCC
CAGCCCCAGCCCAGCCTCGGCAATATATATCCCCGCATAAATAATCTCGC
TTCCACTAATCAGACACGGCAACCAATCTTGAGCACAGATGCGGCGCTGA
GGTGAAATGGAGGTGCGAGCAGAGATCTTGGAGGCGCTGCATAATGCGGC
GGCAGACATAGACGAGGTAAGCAAGCAAAGACGACATGGGAAAATCGTGG
CGGCGCGGGGTTGGACCTCATTATCCGCAGGACAACAGTGGAGCAATCTT
GCAGGGGGGAGAAGGGGAGAAATCAAGGGAGGAAGAATAAGGATAGAGGA
GGGTGGGTCGTGACTTCATTAGATTTTGCGTGCGTGCGCCTTATGCGACG
CGTAGAAACCGATCATCAGGTCCTCAATATGACCCTCCCATTCCTCCAAA
CCCATACACACAAACACACCACACAACACAGTCCACCGATGAAGAAAAGC
TTGAAAAACTCCGCCTGAATGGCTTCTGTAATGATTTGGAAGCCCCCTTA
CCAGCTTCCTCCGCCCTCTCCTCCTCTGCCCACGCCACACCTAGCGTGGC
CCCAGCCTCCTGCACTCTCTTCATCATCGTCGCCGCCCTCGTCTCTGTCG
GGACCGTCCTAACGATTATCACCAAACTCATGACGATACCGATGGCTAAT
TACACTTCGGCTCTCACCCTTCAAACCGTCTTCGCCTTTATTCCTCTCAC
CTTCATCCACATTGGCTTCAAACACAAAATGGGCAAATTGCTCCGTGCAG
ATTTCTTCTACCCCTGGAAGCCTGTCGTGATTATCTCCATCCTTTACGCC
CTCGGCCAGTTTCTCTTCATTTTTGGAACACAATTCACCAGCGGCCCAAT
ACAAGTCATTATATCTCAATCAGCCATTCCATTTAGCATGGGCATTTCGC
ATTTAATGCTTGGCTCGAACTACAGGAGAAGACATTACATAGGAGCCGTA
CTCGTCGTTCTCGGCATCATCCTCGCAGTCGGTGGCTCTCTTGCCAGCGA
ACAAATCGATGCATTCGAAGCAGGATGGATTGTTGGCTACATACTCTCTA
TGGTGCCCCCGGTTATTTACACGGTCTACAGCGAGAGCCTCTTCAAAGAG
AGAGCTACCCCTCCTGACCCTGTCATTTTTACGGGGCTAATCTCCACCAT
TCAATTTTTCTTCCTCTGCCTTCTTGCTCCCATCTTTCCCTACCTCGAAC
AACCTCCATCTACCCTCTCTTCTCTCCTTCCCTCGCTCCTCGCGGGGGGG
AAGTGCTTGGTAGGGATAAATACATTGCCTTCGGACGACTGCTGGCCCCT
TGCTCCCTCCCTCGTCCTCACCTACAACATTTTAAATATTGTCTTACTCT
ACCCCACGTTCGCCTTGCTTGACCGCGGGTCATCAAATGTCTTCTGGCTC
GCCTGCACACTGATTGTACCCTTTTCGGGATTTGCTTTCTCCCTTCCCGT
AATCCCCGACGCCCAACCAGTGACACTTGAGAACAGCCTCGCGCTCTTGG
TCATTGTGCTCGGCTTGGGGACCTACGGTTTCTCCACGAAAACGGCTGAG
GCGGGGTTAGCATACATAAGACGAGCTTTATCGGGGCAGAGAGCCATTGC
CAGCGATAGTGACAATTTGCTGACAAGGCTCGAGATGGTCTCTCTTCCTT
CGTCCTCCTCTTCCTCCTCGTCTTCCTCCTCCTCCTCCACCACGGCAACC
GTCTCCATCATGTCCTCCTTCTCCTCCCTTCCTTCTCCACTCTCGCCCTC
AACGCCACAGGTACGCCAACGAGGGCCGAATGAAAAGAAGAAGGAAGAGA
ATGTGGCCAGCACTTTGCCGTCTCCCTTCCTTCCCACCGGCGCCGGAAGA
GGATAGGGAGGAGAGAGAGAGAGAGAGCGAGAGAGGGCGAGAGAGAGAGA
TGTGGTTAGGGATGGACGATGAGGAGTGAAGGAGGAAAGAATACATTTTG
ACGAGTAACAATGATTCATCTCTATCTCCGAGTATCCTGCAGAGGGCTGT
GTCGTGTCTGGCCCATACGCCTAGCAAGAAAACCCCAACCTTAGCCGACA
ACTCAAACTGTATGTAAACACCGATCCAAGAAAGAAAAGGGGCATTAGAC
ATGATTGAATGAGTATCTTAAATGAATACGCTTCCTCTTCTCAATGCCAG
AGCTGTCTTTCTCTGTTGGAACTTGTTTGAATAAAGCCGACCGTTCCCGA
TATCTGTGTCTTTGTCTTGTCTTCGCCAGGCGCTGTTGTTTGTTGCTCTT
TTTCTCGAAGCCATATTCACATGCATGCACAAATCCTTTCCTCCCTGCCA
TCATCCATCCCTTCCTCCCTACCTACCTACCTCCGTCGTGGTCTTCACAA
CTCCGCCGTTTCCAACCATACTTCCCTACGCCCCAACTCCTCCGTGTCGT
CCTCTCTTTCTCTCCCACTTCTCCTCCTCCTCCTTTCCGCCACCCTCCTC
AACAACGTCCACACACCCTCCTCATTCCATTCGTCTTTCTCCATCGCTCT
TTCAGCCAATAATCTCCGACCCAAATTTAAATCAGTGTCCATTTTTAAAC
ACGCACTAATCAGTGTTAATTTCAGCACATCCCTCTGTGCATGCGAGCCT
CCAATCAAATGCCACCGACTCGAGGAAGAGGAAAGCAACTTTACAGTTTG
GGAATAATTGCCTTGTACATAATGAATTAAGGCCTCACTTATGTCCAATC
CCACTTCAGAGAGAACGTAGCTGTTCGTGGGTTGCGGGAGGAGGAAGGGC
AACCCGGAGGAGGAGGAAGAAGAGAAGTGTCGTGCCTGTCTCTTTTTCCC
TCCTTCCCTCCCTCCCTCCCTCTCCTCCTCCCGAAAGGTCCGTTGAAGCC
AGTCAGATAATGTGGGTATTTTCAACACTCGCACAAGCTGTCCTATCCCA
TAGACAACCTCCCACCATCGAGGCCATTGCTCTTGTTGTACGTGCTGCTG
CCTCAGTTCCCTGAGTTGCTGCTTGAGCTGCTGCTGTTGTTGGGGTAGGC
TGGCAGCAGCGTGTCTCTTCATGGATGAGAGAGAGGCTTTGGCGGCGGGG
ATGTCAGTGACTGAGAGACACATCATCATGTGGACGTCATTAAAGCTAGT
GGTGTGCATGGTCTCGTACCCCCCATCCCCATACCACGTCCGCAATTCCT
CCCATTTCCTCCTCTCCCGCCCTCTCTCCTTGCCTCCCCCCCTCTCTCCC
TCCTCCTCTCCCTCGTCCTCCATCAACATCATTCTCCACAACAAGCTTGC
CGCGTCTGCCAAGGCCAACGGCGTCGCCGGTGCCACTGTCCCTCCCTCCT
TCCCCCCCTCCTTCAATAACACTCCATCCAACACCTCCCACACAATCCCC
TCCTCTCTCCCCAACGCCAACACAGCCCGATGCCAGGCCACGTGGTTAGT
GAAAAGGGAAGGAAGGTCTTCCCATTTTCCCTTGAATTCTTTGTAGATTT
TTTCCCCTTCTTCTCTCCTACCTGTCATTTCGTAGGTATGTATCAAGGCA
TGTAAAGCAGTTACATCTGTAGCGTCTTCCGACAGGACTTGACGGGCTAC
AAGGGCGGCACGGTTCAGATCGCCTGTTTCTTCCAAGGCGAAAGCCCACA
TACTTCGAACCATACGGTAATCATTCTCCACCTTCGCCTCCTTCTCCTTC
TCCTCCTTCTCCTTTTGGGGCTCCGAACGTTTCTCGTCCTCCAATGCTTC
CTCCCTCCCATTCACCCTTTCCTCCCCCAAGTCCCATCGACTCAACACCC
TGGCCAAGCTCCTCTTCATTCCCTCGCTATCCCCTAAAATAATGTACGCG
TCATGGACACTCCTTACCGCCAACAATTCCCGAGGGTTCATTGCTAAGAC
CTCTTCCCAATACATGGCGGCAAGTGCGAAATCAGGAGTGGGCGGGTAAT
ACAGGGCATGAAACGCGAGATAATACCAACGTTCACGAGCTGTTGGGCTT
GAATACGGGTACTCTTGCTGTTGCTGTTGGTGCTGCTGGTGGCGCAGCTG
TTGCTCATGGGAAAGGTGGTGGGAGGGAGGGAGGTCCATGAAGAAGGCAG
CAGCGGCGTGATAGCTTTCTCGGACAAGTGGGCTATTTTTTAGCACACCT
GTCGACAACAGAAGGATGGAACCTCGGTATATATGTGCCATCAAATATGA
GGATGACGAATTGAGGGAGAGAGAGAAAGGGGTGCTGGTGGTGAGCTCCA
AGAGGGGTTCAAGCACCTGGCCTCGCAGCCCCGCATAAGACCGGACAGCT
TCATTGAAGAGTGTGATAGCCTCGGGGGGGACAGGTGTGGAAATGGGACC
CCAGGCATCGGATGTACGAAGATCAGATGGAACCGAGGGAAAGGATTGAG
TAGAAGAAGTGGTGCTGCTGGAAGAGGGATAGCCGATGGCGTCACGCGAG
GAGGCGAAGGTCAACACGGCCACGATGTACACAGACATGAAGAGGCGCAG
CGCAGCCAGGGCGGGAAGAAGGCCAAGGTATGGTGGTCTAGCCATGAATG
TGCGTAGCCTCTGCGGTGTGTAGGGTGGGTCAGAAAGGTACTGCTGCTTT
CTTGCTTAAGGAACGAAGCTTGAAGCAAATCAGCGATTGACGGCAACCAA
CACACAACTCGCAAGCGTGCCTGCCCACGAGGGTTTTAGCTCTACGCTTG
TCCTTGATAGTCACGCATGAGTAGGCTGGACGTCCAGGAACGCAAGGTCG
ATGTTCTTGCATGTATTTGTACTTCCCATCTCCTCC

Coding sequence (CDS) from alignment at chr19:414897..419782-

>NO19G01330.1 ID=NO19G01330.1|Name=NO19G01330.1|organism=Nannochloropsis oceanica|type=CDS|length=1485bp|location=Sequence derived from alignment at chr19:414897..419782- (Nannochloropsis oceanica)
ATGGAGGTGCGAGCAGAGATCTTGGAGGCGCTGCATAATGCGGCGGCAGA
CATAGACGAGTCCACCGATGAAGAAAAGCTTGAAAAACTCCGCCTGAATG
GCTTCTGTAATGATTTGGAAGCCCCCTTACCAGCTTCCTCCGCCCTCTCC
TCCTCTGCCCACGCCACACCTAGCGTGGCCCCAGCCTCCTGCACTCTCTT
CATCATCGTCGCCGCCCTCGTCTCTGTCGGGACCGTCCTAACGATTATCA
CCAAACTCATGACGATACCGATGGCTAATTACACTTCGGCTCTCACCCTT
CAAACCGTCTTCGCCTTTATTCCTCTCACCTTCATCCACATTGGCTTCAA
ACACAAAATGGGCAAATTGCTCCGTGCAGATTTCTTCTACCCCTGGAAGC
CTGTCGTGATTATCTCCATCCTTTACGCCCTCGGCCAGTTTCTCTTCATT
TTTGGAACACAATTCACCAGCGGCCCAATACAAGTCATTATATCTCAATC
AGCCATTCCATTTAGCATGGGCATTTCGCATTTAATGCTTGGCTCGAACT
ACAGGAGAAGACATTACATAGGAGCCGTACTCGTCGTTCTCGGCATCATC
CTCGCAGTCGGTGGCTCTCTTGCCAGCGAACAAATCGATGCATTCGAAGC
AGGATGGATTGTTGGCTACATACTCTCTATGGTGCCCCCGGTTATTTACA
CGGTCTACAGCGAGAGCCTCTTCAAAGAGAGAGCTACCCCTCCTGACCCT
GTCATTTTTACGGGGCTAATCTCCACCATTCAATTTTTCTTCCTCTGCCT
TCTTGCTCCCATCTTTCCCTACCTCGAACAACCTCCATCTACCCTCTCTT
CTCTCCTTCCCTCGCTCCTCGCGGGGGGGAAGTGCTTGGTAGGGATAAAT
ACATTGCCTTCGGACGACTGCTGGCCCCTTGCTCCCTCCCTCGTCCTCAC
CTACAACATTTTAAATATTGTCTTACTCTACCCCACGTTCGCCTTGCTTG
ACCGCGGGTCATCAAATGTCTTCTGGCTCGCCTGCACACTGATTGTACCC
TTTTCGGGATTTGCTTTCTCCCTTCCCGTAATCCCCGACGCCCAACCAGT
GACACTTGAGAACAGCCTCGCGCTCTTGGTCATTGTGCTCGGCTTGGGGA
CCTACGGTTTCTCCACGAAAACGGCTGAGGCGGGGTTAGCATACATAAGA
CGAGCTTTATCGGGGCAGAGAGCCATTGCCAGCGATAGTGACAATTTGCT
GACAAGGCTCGAGATGGTCTCTCTTCCTTCGTCCTCCTCTTCCTCCTCGT
CTTCCTCCTCCTCCTCCACCACGGCAACCGTCTCCATCATGTCCTCCTTC
TCCTCCCTTCCTTCTCCACTCTCGCCCTCAACGCCACAGGTACGCCAACG
AGGGCCGAATGAAAAGAAGAAGGAAGAGAATGTGGCCAGCACTTTGCCGT
CTCCCTTCCTTCCCACCGGCGCCGGAAGAGGATAG

Synonyms

Publications