NO19G00990.1, NO19G00990.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G00990.1
Unique Name	NO19G00990.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3654
Alignment location	chr19:330209..337321 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:330209..337321 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO19G00990.1 vs.
Match: EWM23595.1 (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 466.5 bits (1199), Expect = 2.300e-127
Identity = 287/554 (51.81%), Postives = 358/554 (64.62%), Query Frame = 0

Query:  243 MGRWITNFRELPPSDLIENKVILDAFAVVAQGN-KNGGDMLFESAVDLLIDVFVAHDCSRPDAPPLEAHLSLASFLVPNVFALRPTYLAALRRA--PPSSSLPSLGDVDTAKGICMVFVEMGLSYLPLLLSPHPYEQDALLRLLLLATSHPDPSIASYALPFWYELAREGGR---EGGGRGVGERYGAVLQELVGVLVEKMVYPEEAGTDGRIEGGQGAGWDKEEKEEFEDFRFKLGDAIKDVCALVGPVPCLSLLARSLPTSLP-PSPLPPPPHGDTLRH-----------------HHCHERRAPAHFPPPFLSLLGP---SLLLVHPPPPSRHHQSCPGPTRAFP-------PPFLPPSLPP--TDLLPNTYSFLLSSLSSPSTSSSAARALHDICLAFGRARGSGSNSSNNNSPSLLPSLPPLPLFEQLMHASLHGEIKYRDEVMVLEGLCEGVVAYM----------QGGREEVVGQMVGIIGKHMAGVLQEEQ----REGGREGVKPRFQSVEEDLERLTAVVKGSEPR---GQGGREGGKDGAGEVA 744
            MGRW++ +R+LPP+DL+EN+++LDAFAV+AQG  +NG + LF+SAVDLLIDVFVA+D S P+   L+A L LA FLVPNVFAL+PTYLA+LR +  PPS+     GD DTAKGICMVFVEM LSYLPLLLSP PY+Q+ALLRLLLL TSHP+PS++ YALPFWYELA+ GGR   +GG  GVGERY ++LQEL+  LVE+MVYP EAG  GR    +G GWD+EEKEEF+DFR+KLGDA+KDV +L+GP PCL  LA  L  +L  P+P  PP H  + R                         AP          + P   SLLL    P S    S P   R           PFLPP  P   TDLLP  Y  LL+ L SP+ S+SAARAL ++ LA GR  G               SLPPL LF Q+  ASL G++ + +E +V+EG+ EGVVA M          +GGREEVV +MVG++G+H+  V+++EQ    REGG EG   R   VE+DLERLT +V+ SEPR    +GGREGG++G  +VA
Sbjct:    1 MGRWVSYYRDLPPTDLVENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGR----EGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLADLGSPAASASAARALQEVLLACGRVTGP-------------DSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMVGEHLGDVVRKEQQERRREGGGEGGGKRQLMVEQDLERLTTIVRVSEPRLSGEEGGREGGREGGRDVA 537

The following BLAST results are available for this feature:

BLAST of NO19G00990.1 vs.

BLAST of NO19G00990.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM23595.1	2.300e-127	51.81	conserved unknown protein [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO19G00990	NO19G00990	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO19G00990.1	NO19G00990.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO19G00990.1.cds1	NO19G00990.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds2	NO19G00990.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds3	NO19G00990.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds4	NO19G00990.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds5	NO19G00990.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds6	NO19G00990.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds7	NO19G00990.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds8	NO19G00990.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds9	NO19G00990.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds10	NO19G00990.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds11	NO19G00990.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds12	NO19G00990.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00990.1.cds13	NO19G00990.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr19:330209..337321-
coding sequence from alignment at chr19:330209..337321-

mRNA sequence

>NO19G00990.1 ID=NO19G00990.1|Name=NO19G00990.1|organism=Nannochloropsis oceanica|type=mRNA|length=3654bp
ATGACCGGCCTACCAACGCCGGCGCAGATGGACCCGGCGACCATGCTGCT
CCAGACCCAGGAGGCTCTACGTGTCTTCTATGGCGGGCAAGGCCACAGTC
GGGAGGAGTTCAAGCAAGCCGAAGCATGGCTAGAAGCCTTTCAGCACTAC
CCACAAGCATGGGCCGTGGCGGACGCGATTTTAAGCAACGACAGTTCAAG
TGCTCCTGTTCTTTTCTTTGCGGCAAAAACATTACAGACGAAAGTATACA
TGGATTGGGAGGAGTTGGAGCCGGGCATGATCGAGCCGTTCAAGCAGCAG
TTGGTGAAGCACCTCGCCACCTGGAGTGCCCGCCGTCGGCAAGGAGCCAA
TGGCAGCAGCAGCGGCAGCAGCAGCAGCAGTGGGCGCATGGGGGACTTGA
GTGCGTTTTTGAACCGACTGTGTGTGGTGTTGGCGGCGGTCGCGGTGCAG
ACCAACTGGCAGGGCGTCCTAACGGAGTGCATCAACCTCCTCGCCTCCCA
CGGGGTACCACAGGAACACCTTCTCCACCTCCTCGAAGAGCTGCCCATGG
AAGCCACAAGCAACCAATTTTCTTCCTCCTCGCTCTCTCGTGACGCACAA
GAGCATTTTCGGTGCCAGCTGATGCAGCTCCGCCCGCACGTCTTTGCTTA
CTTGGCAGCAGTGGACGTAGGGGCCGACGCAGGGATCACTTCCCCTGCCA
TGCTCCAGCGGAAGATCTTCCGAGGGATGGGCCGATGGATCACCAACTTC
CGGGAGCTCCCTCCGTCAGACTTGATTGAAAACAAAGTGATTTTGGATGC
CTTTGCAGTCGTTGCGCAAGGGAACAAGAATGGCGGGGACATGTTGTTTG
AGTCGGCGGTCGATCTCCTCATTGACGTTTTCGTGGCACATGACTGCTCC
CGCCCTGACGCCCCTCCCCTTGAGGCCCACCTCTCTCTCGCCTCCTTCCT
TGTCCCCAACGTCTTCGCTCTCCGACCCACCTACCTCGCGGCCCTCCGCC
GCGCCCCCCCTTCCTCCTCCCTCCCCTCCCTCGGCGACGTGGACACAGCC
AAGGGGATATGCATGGTTTTTGTCGAAATGGGCCTTTCGTACCTCCCCCT
CCTCCTCTCCCCCCATCCCTACGAGCAGGATGCCCTCCTTCGGCTCCTCC
TCCTCGCCACCTCCCACCCAGACCCCTCCATCGCCAGCTATGCTCTGCCC
TTTTGGTACGAGCTGGCCAGGGAGGGAGGGAGGGAGGGAGGAGGGCGCGG
CGTCGGTGAGAGGTACGGCGCCGTCCTCCAGGAGCTGGTGGGGGTTTTGG
TGGAGAAGATGGTCTATCCCGAGGAGGCAGGGACCGACGGAAGGATCGAG
GGGGGGCAAGGCGCGGGATGGGACAAGGAGGAGAAAGAGGAGTTTGAAGA
CTTTCGGTTCAAGTTGGGCGACGCCATCAAGGACGTCTGCGCCCTCGTCG
GCCCTGTGCCTTGCCTCTCCCTCCTGGCCCGCTCCCTCCCCACCTCTCTC
CCTCCCTCCCCCCTTCCTCCTCCACCTCATGGCGACACACTCCGACATCA
CCACTGCCATGAGCGTCGTGCCCCAGCTCATTTCCCTCCTCCTTTCCTAT
CACTCCTCGGCCCCTCCCTCCTCCTCGTCCACCCCCCTCCTCCTTCGCGT
CACCACCAATCATGTCCTGGGCCGACTCGCGCCTTTCCTCCTCCCTTCCT
CCCTCCCTCCCTCCCCCCCACGGACCTCCTTCCCAACACCTACTCCTTCC
TCCTCTCGAGCCTCTCCTCCCCCTCTACCTCCTCCTCCGCCGCCCGTGCC
CTCCACGACATCTGCCTGGCCTTTGGCCGCGCCCGCGGCAGCGGCAGCAA
CAGCAGCAACAACAACAGCCCCTCCCTCCTTCCCTCCCTCCCTCCCCTTC
CCTTGTTTGAGCAATTGATGCACGCGTCCCTCCACGGCGAAATCAAATAC
AGGGATGAGGTGATGGTTCTGGAAGGGCTCTGCGAAGGAGTAGTGGCATA
CATGCAGGGAGGGAGGGAGGAAGTGGTGGGGCAGATGGTGGGAATAATCG
GGAAGCATATGGCGGGGGTCTTGCAGGAAGAACAGAGGGAGGGAGGGAGG
GAGGGAGTTAAACCGAGGTTCCAATCGGTGGAGGAGGATCTAGAGAGACT
CACGGCCGTTGTCAAGGGATCCGAGCCCCGGGGCCAGGGAGGGAGGGAGG
GAGGGAAGGATGGAGCGGGGGAGGTTGCCCAAATCGTGCAGGGGCTCTTG
CCGGTCTTGGAAGCCTCATACCAGGCGTATAAAAGCAAGGTGGAAGTGAT
GGAGAAGCTTTGCAAATTCCTCAAGCACGCCATGCGCGCTGCTCGCCCTC
GCGCCTCCTTCTACCCCCTCCTCGAGCCCCTCATCTCCTTCCTTCTCCGC
GGCTTGTCCGAGACCGAACAATCCTCTTTCCTTTATTGCCTGTCGTACGT
TCTCTCAGAATTCGGCCCCCGCCGAAGCAGCAGCAGCAGCAATGGCCTGC
AGCAGCAGCAGCAGCAGCAGCTACTCGCCCGCCTTTTGTTAATGTTCGAA
GAAGTGTCCCAAATCGTCTTCTCCTCCTTCCTGCGAACAGCGGATGATTT
CACGGTAGGGAAGGGAGAAGGGAGGGAGGGAGGCACCCAAGATATAAATC
ATCAATCATCAATCTCTCACCCCTCCATCCCTCCGTCCTTTCATCCGTCC
CTCCCTCTGCCCCTTCCTCCGTCCCTCCGTCCCTCCCTCAGGACCACCCG
GATATCGTGGAGGAGTACTTCTACTTCGCTTCCAAGTACTTCTCGCATTG
CCCCCTTCAACTGGCGGCCCGCTGCCAACGGGGAGAGATGCAGATGCCGG
CCCTCCCTCAGACACTGCTTCATACAGCGATGGTCGGTTTCGTCACTCTC
CAGCATAAGGATGCTCAACGAGCCATTGTCCACTTTCTTGAAACCTTCCT
CTCGGCCGGCCTCGATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCTC
TGCAAGAAACACACGCCTGGATCCTGTCCCTCCTCCACCTCCCCAACGAG
ACCCAGTCCAACCTCCCCCCCTTCCTCGGGCCCGCCCTCCTCTTCAAGCT
ATTCCAGGGCCTGGCCGGGGAGATCGACGACACGCTCATTACGGACGAGG
ACGATCCTTGCCTCTGCGGTGTCCTCTACGCGGCCGCGAGATGCTTGGCA
CCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTGTTGAGGGAGTGGGT
GCTCCAGGCGGTGCAAGGCGGCATCGGCGAGCATTTGGCGTCGCCACAGG
AGAGGCAGAAGGTGTGGGAAGGAGTGTGTAGGGTGGGGGAGGGAGGGAGG
GAGGGAGGAAGACGGGAGTTCTTTTCGATGGTCGCGGACTTTGCGTGGAA
TTGCCGGGAAAGGGGGAGGAAGTGGAGGAGGAAGGGGTGGGGGAGGGTAG
AGGGACGGAAGGATGGAATACTGGAAGGTTGAGGGATGGAGGGATTTGGA
GGCAGGGGTGGGAAAGGTGGCATGCATGTTAATAGACGGATGGGATACCG
TACACAGCGTAGGAGAAAATAAGGAGCAGCAAGACAATGAAATGAATGTA
ATAGCTTAGGTGTGTCGAAAAACAACATAAAATAAAGTCTGCAATATGAT
TAAA

protein sequence of NO19G00990.1

>NO19G00990.1-protein ID=NO19G00990.1-protein|Name=NO19G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1080bp
MTGLPTPAQMDPATMLLQTQEALRVFYGGQGHSREEFKQAEAWLEAFQHY
PQAWAVADAILSNDSSSAPVLFFAAKTLQTKVYMDWEELEPGMIEPFKQQ
LVKHLATWSARRRQGANGSSSGSSSSSGRMGDLSAFLNRLCVVLAAVAVQ
TNWQGVLTECINLLASHGVPQEHLLHLLEELPMEATSNQFSSSSLSRDAQ
EHFRCQLMQLRPHVFAYLAAVDVGADAGITSPAMLQRKIFRGMGRWITNF
RELPPSDLIENKVILDAFAVVAQGNKNGGDMLFESAVDLLIDVFVAHDCS
RPDAPPLEAHLSLASFLVPNVFALRPTYLAALRRAPPSSSLPSLGDVDTA
KGICMVFVEMGLSYLPLLLSPHPYEQDALLRLLLLATSHPDPSIASYALP
FWYELAREGGREGGGRGVGERYGAVLQELVGVLVEKMVYPEEAGTDGRIE
GGQGAGWDKEEKEEFEDFRFKLGDAIKDVCALVGPVPCLSLLARSLPTSL
PPSPLPPPPHGDTLRHHHCHERRAPAHFPPPFLSLLGPSLLLVHPPPPSR
HHQSCPGPTRAFPPPFLPPSLPPTDLLPNTYSFLLSSLSSPSTSSSAARA
LHDICLAFGRARGSGSNSSNNNSPSLLPSLPPLPLFEQLMHASLHGEIKY
RDEVMVLEGLCEGVVAYMQGGREEVVGQMVGIIGKHMAGVLQEEQREGGR
EGVKPRFQSVEEDLERLTAVVKGSEPRGQGGREGGKDGAGEVAQIVQGLL
PVLEASYQAYKSKVEVMEKLCKFLKHAMRAARPRASFYPLLEPLISFLLR
GLSETEQSSFLYCLSYVLSEFGPRRSSSSSNGLQQQQQQQLLARLLLMFE
EVSQIVFSSFLRTADDFTVGKGEGREGGTQDINHQSSISHPSIPPSFHPS
LPLPLPPSLRPSLRTTRISWRSTSTSLPSTSRIAPFNWRPAANGERCRCR
PSLRHCFIQRWSVSSLSSIRMLNEPLSTFLKPSSRPASIAAAAAAAAAVL
CKKHTPGSCPSSTSPTRPSPTSPPSSGPPSSSSYSRAWPGRSTTRSLRTR
TILASAVSSTRPRDAWHRPPSRPPSRPPC*

mRNA from alignment at chr19:330209..337321-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO19G00990.1 ID=NO19G00990.1|Name=NO19G00990.1|organism=Nannochloropsis oceanica|type=mRNA|length=7113bp|location=Sequence derived from alignment at chr19:330209..337321- (Nannochloropsis oceanica)
ATGACCGGCCTACCAACGCCGGCGCAGATGGACCCGGCGACCATGCTGCT
CCAGGTAAGAAATACAAGACACGGAGGGAGGAAGGGAGGAAGACGAGGAG
CGAGGGGAGGCTAGCTTACGTCGTGTGCGGCACCACTCATTTTGGACACT
CGGACGCACACACTTATGTAGACCCAGGAGGCTCTACGTGTCTTCTATGG
CGGGCAAGGCCACAGTCGGGAGGAGTTCAAGCAAGCCGAAGCGTAGGTCC
CCCTCCCTCCTTCCCCACCTCCTTCCCCCCCTTCTTCCCTCCCTCCTTTC
CTCCCTCCTTTCTTCCCTCCTTCTCATCCATCCCTTTAAACATCACCGTC
CACGTCCAATACCACAGATGGCTAGAAGCCTTTCAGCACTACCCACAAGC
ATGGGCCGTGGCGGACGCGATTTTAAGCAACGACAGTTCAAGTGCTCCTG
TTCTTTTCTTTGCGGCAAAAACATTACAGACGAAAGTATACATGGATTGG
GAGGAGTTGGAGCCGGGCATGTGAGTTTGAGGCGGAGGGGGAGGAAGGGA
GGGTGGAAGAGGGGAAGGAGGGGATGGATGAGGGTGTGTGTGGGTCAGTG
GTGTCGCTGGGAAGAAACTGCGGAGGTGCGGAGCAAAGGAGGAGAGGTGG
GTATGTGTGGTATTTGGAGAGAGGGGGTTAGGGGGGAGGAGGGAGGTATG
ACAGGATGGATTTAAGAAAGAGGGCGCTGGCGACGAAGACCGAGGAGGAA
ATTGAAGGTGGGAAGAAGGGAGGGAGGTGGAGGATGGATAGGGAGGGAGT
CGGAGGAAGGAAGGAATGAAGGAGGGAGGGAGGGTCTTACGTGTCTTGTG
TGACATTGATGGGAATCAAAGGCTGACCAAGGAGGGTAGGAGGTGGAGGG
GGAGGGAGGGAGGGAGGGGGGAGGGAATGAAGGGAAACAATCTGGTAGTA
AGCGTCATCTAGGTCTTCTCTCGCGAGGAAAGGAGGGAAGGAGGGAGGGA
GGGAGGGAGGGCGGGCGAGGCGGGAAACCAAGAGTTTACAGAGTGAGAGA
AAGGGGAGGAGGGATGAAGGAAAGGAAGAGGCATCATAACCTTAACCGGA
AAATACACACACCCCACGTCCTTATCATCTGATTGGTCGGAAACCATGTA
GGATCGAGCCGTTCAAGCAGCAGTTGGTGAAGCACCTCGCCACCTGGAGT
GCCCGCCGTCGGCAAGGAGCCAATGGCAGCAGCAGCGGCAGCAGCAGCAG
CAGTGGGCGCATGGGGGACTTGAGTGCGTTTTTGAACCGACTGTGTGTGG
TGTTGGCGGCGGTCGCGGTGCAGGTAGGGCGGGAGGGAGATAAGGAGGGA
GGGAGGGAGGAAGGAAGGGAGGGAAGGCGGAAAGGGGAGTAAGAAATTAG
AGAGGCTTATTCAGCTGTATTTTGATTTGTATGGGTGGGGCTTCTTTATT
TTATTTTAAGTTTAAATGTACGTTAAAAATGATAGTAGGCCTTCTTGTAT
TAATTTATTGTTTTATCTATCGTGTAGTGTACATACATGTATATATGCCA
TGAAAGGCACGGTGAGCCGGCCGTCTAGATGAACATTCTTACTTATGGGG
AGAGGCCTCCAGTGATCTGGCGGTGACTATGTCCATCCAACTGCAGAGTC
AAGCGCGAGAATGAAAAACCACCCACCTCTCCTGGCGCCCGACTTGAGGT
GGACTTCCACACCCCTAGTCAGCTTTGGATTCTGTGTAATGTCCTTCCCC
CCTCCCTCCCTCCCTCACGTCTTCTGATGGTCGTGTGGTGTATGATGCTC
GTTTTCATCCTATTCTTTCTTCCCCGCTACGGTTATCCTTCTCCTTTCCT
TCCCTCCCTTTTCTGCCTCCTCGACGACCTCTCCATCGAAATACACGGCC
CATACGAACCACCACCTCGGTCTAAGAGGATACTTAGTTATCGTTTTCAC
ATTCTGATCATTGTTCACGTTTTTCAATGTCCAATCACCCACCCCCCAAA
ATATGGCTACAGACCAACTGGCAGGGCGTCCTAACGGAGTGCATCAACCT
CCTCGCCTCCCACGGGGTACCACAGGAACACCTTCTCCACCTCCTCGAAG
AGCTGCCCATGGAAGCCACAAGCAACCAATTTTCTTCCTCCTCGCTCTCT
CGTGACGCACAAGAGCATTTTCGGTGCCAGCTGATGCAGCTCCGCCCGCA
CGTCTTTGCTTACTTGGCAGCAGTGGACGTAGGGGCCGACGCAGGGATCA
CTTCCCCTGCCATGCTCCAGGTACGCTTGCCCTCCCTTCCTTCCTCCTCT
CTCCCTCCTTCCCTTCCTTCCTCCCTCCAACCCCGCGGCAGTAGACGCAT
GGGTCCAAGCAGGGTTATCACACGTAATACCCAACACTTAATCTCCAATA
ACCCAATACCCAAATACCCAACACCCAATACCCAATACCCCAATACCCAA
AACCCAACACCCAATACCCAATACCCCGATACTCTATACCCCAATACCCC
AATACTCCAATATCCGATACCCCGATACTCTATACCCCCATACCTCAATA
TCCGATACCATCACTGCCACAACCACAGCGGAAGATCTTCCGAGGGATGG
GCCGATGGATCACCAACTTCCGGGTACGTTTTCTTCCTCCTCCTCTTCCT
CCCTAGTTCCTTCCCTCTCTCTTGTTTATCCCCCTCCCCTTCCTTCTTCC
TTCTCCTCTTGGCCGTTCAACCATCGTCTCCGTCCATCAACCCGCTTTTT
CACCATGACGGTGCTCACCACCCCTCCCTCCCTCCCTCCCTCCCCCCGGC
TTTTCTCCTCCCCCAGGAGCTCCCTCCGTCAGACTTGATTGAAAACAAAG
TGATTTTGGATGCCTTTGCAGTCGTTGCGCAAGGGAACAAGAATGGCGGG
GACATGTTGTTTGAGTCGGCGGTCGATCTCCTCATTGACGTTTTCGTGGC
ACATGACTGGTAAGGACCCCTTCTTTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTGGCTCTGTATTGTTGTCGTTCGTGCGCGCGTCGA
CAAGGAAAATGGTGACGGCAGTAGCAGAAACCGCTTCAAGTGTTTGAATC
TGTTGTGAGGATAAAGCTTTGTTCGGTCGCAGGGATTAGGATTACACGTC
TTGGAAGAAGCGAAGAAGTACGGACGGAGGAAGGGAGGAAGCGAGGAAGG
GAGGAAGGTAGTGAGAGCGAAAATGCCACTCGAGTCGAACTTCACCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCACCTTCCTTCCCTCAGCTCCCGCCC
TGACGCCCCTCCCCTTGAGGCCCACCTCTCTCTCGCCTCCTTCCTTGTCC
CCAACGTCTTCGCTCTCCGACCCACCTACCTCGCGGCCCTCCGCCGCGCC
CCCCCTTCCTCCTCCCTCCCCTCCCTCGGCGACGTGGACACAGCCAAGGG
GATATGCATGGTTTTTGTCGAAATGGGCCTTTCGTACCTCCCCCTCCTCC
TCTCCCCCCATCCCTACGAGCAGGATGCCCTCCTTCGGCTCCTCCTCCTC
GCCACCTCCCACCCAGACCCCTCCATCGCCAGCTATGCTCTGCCCTTTTG
GTACGAGCTGGCCAGGGAGGGAGGGAGGGAGGGAGGAGGGCGCGGCGTCG
GTGAGAGGTACGGCGCCGTCCTCCAGGAGCTGGTGGGGGTTTTGGTGGAG
AAGATGGTCTATCCCGAGGAGGCAGGGACCGACGGAAGGATCGAGGGGGG
GCAAGGCGCGGGATGGGACAAGGAGGAGAAAGAGGAGTTTGAAGACTTTC
GGTTCAAGTTGGTACGTGCTTAGTGGTATGACATGGAGAAGAGGAGGACA
TGAATCTCAAGGAAAAAGGACCCGGAGGACATGCATCCCACCAACGATCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTA
CCTTCTCCTCTTCGCCCCCCCCTCTTCTCCTTGTCGAAGAAGGGCGAAAA
GGAGGGAGCGGGAAAGAAGAAGCAGAGGAAGCGGAGGAGGAGCTTTGCTA
CTTCTTTAATCTTACCATGCCTCCCTCCATCCCTCCCTTCCTCCCTTCCT
CCCTCCCTCCCTCCCACAGGGCGACGCCATCAAGGACGTCTGCGCCCTCG
TCGGCCCTGTGCCTTGCCTCTCCCTCCTGGCCCGCTCCCTCCCCACCTCT
CTCCCTCCCTCCCCCCTTCCTCCTCCACCTCATGGCGACACGTGGAGGCC
TGCCTTTGGGCCCTCCGTTCCATCGCCCACCGCCTCCCCTCCCCCCCCTC
CCTCCCTCCCTCCTCCTCCTCCTCCACCACCCCTCCAGACTCCGACATCA
CCACTGCCATGAGCGTCGTGCCCCAGCTCATTTCCCTCCTCCTTTCCTAT
CACTCCTCGGCCCCTCCCTCCTCCTCGTCCACCCCCCTCCTCCTTCGCGT
CACCACCAATCATGTCCTGGGCCGACTCGCGCCTTTCCTCCTCCCTTCCT
CCCTCCCTCCCTCCCCCCCACGGACCTCCTTCCCAACACCTACTCCTTCC
TCCTCTCGAGCCTCTCCTCCCCCTCTACCTCCTCCTCCGCCGCCCGTGCC
CTCCACGACATCTGCCTGGCCTTTGGCCGCGCCCGCGGCAGCGGCAGCAA
CAGCAGCAACAACAACAGCCCCTCCCTCCTTCCCTCCCTCCCTCCCCTTC
CCTTGTTTGAGCAATTGATGCACGCGTCCCTCCACGGCGAAATCAAATAC
AGGGATGAGGTGATGGTTCTGGAAGGGCTCTGCGAAGGAGTAGTGGCATA
CATGCAGGGAGGGAGGGAGGAAGTGGTGGGGCAGATGGTGGGAATAATCG
GGAAGCATATGGCGGGGGTCTTGCAGGAAGAACAGAGGGAGGGAGGGAGG
GAGGGAGTTAAACCGAGGTTCCAATCGGTGGAGGAGGATCTAGAGAGACT
CACGGCCGTTGTCAAGGGATCCGAGCCCCGGGGCCAGGGAGGGAGGGAGG
GAGGGAAGGATGGAGCGGGGGAGGTTGCCCAAATCGTGCAGGGGCTCTTG
CCGGTCTTGGAAGCCTCATACCAGGCGTATAAAAGCAAGGTGGAAGTGAT
GGAGAAGGTAAAGGGCGCCCCTCCCTCTTTCCCTCCCTCCCTCCCTCCCT
CCCTTTCTTTCTTCCTCCCTCCCTCCCTCTCTCCCTTTCTTTCTCCCTTC
CTCCCTTTCTCTCCTCCCTCGCTCCCTTTCTCCCTTCCTCCCTTTCTCTC
CTCCCTCTCTCCCTTTCTCCCTCCCTCCCTTTCTCGTACGTGTGGGCGGG
TGGCGTGGTGTCTTCGCCGTCCCTCTCTCCCTCTCTTCCTCCACCTACTT
TCCTCCAGCTGCTAGCAAGCCCTCACCTTTCCGTTCTCTCTCCCTCCCTT
TCCCCCTCTCTCTCGCTCCCTCCACAGCTTTGCAAATTCCTCAAGCACGC
CATGCGCGCTGCTCGCCCTCGCGCCTCCTTCTACCCCCTCCTCGAGCCCC
TCATCTCCTTCCTTCTCCGCGGCTTGTCCGAGACCGAACAATCCTCTTTC
CTTTATTGCCTGTCGTACGTTCTCTCAGAATTCGGCCCCCGCCGAAGCAG
CAGCAGCAGCAATGGCCTGGTAGGCACCCCTTCCTCCCTCCCGTCCTCCC
TCCCGTCCTCCCTCTCTTCCTCTTTGCATCCCATCTGCTTTCCCTCCTTC
CCCCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTACACGCCCGAAGTC
CCCCCTTTCATTCCATCCCCTCCCCTCCCCTTCCCTGCACATTTCCTCCT
TCCCGCAACGCCCACACCAGCAGCAGCAGCAGCAGCAGCAGCAGCTACTC
GCCCGCCTTTTGTTAATGTTCGAAGAAGTGTCCCAAATCGTCTTCTCCTC
CTTCCTGCGAACAGCGGATGATTTCACGGTAGGGAAGGGAGAAGGGAGGG
AGGGAGGCACCCAAGATATAAATCATCAATCATCAATCTCTCACCCCTCC
ATCCCTCCGTCCTTTCATCCGTCCCTCCCTCTGCCCCTTCCTCCGTCCCT
CCGTCCCTCCCTCAGGACCACCCGGATATCGTGGAGGAGTACTTCTACTT
CGCTTCCAAGTACTTCTCGCATTGCCCCCTTCAACTGGCGGCCCGCTGCC
AACGGGGAGAGATGCAGATGCCGGCCCTCCCTCAGACACTGCTTCATACA
GGTCCGTCCGCCCGCCCTCCCTCCCTCCGTCCCGTCCTCCGTCCCCCCCT
CCCAACCATGGTCCGTTTCACCACTCACGCCTTCCCTGCCCTCCCTCCCT
CCCTCCCTCCTTCCCTCTCTCCTCCCTCCTTGCCAGCGATGGTCGGTTTC
GTCACTCTCCAGCATAAGGATGCTCAACGAGCCATTGTCCACTTTCTTGA
AACCTTCCTCTCGGCCGGCCTCGATAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGTTCTCTGCAAGAAACACACGCCTGGATCCTGTCCCTCCTCCACCTC
CCCAACGAGACCCAGTCCAACCTCCCCCCCTTCCTCGGGCCCGCCCTCCT
CTTCAAGCTATTCCAGGGCCTGGCCGGGGAGATCGACGACACGCTCATTA
CGGACGAGGACGATCCTTGCCTCTGCGGTGTCCTCTACGCGGCCGCGAGA
TGCTTGGCACCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTGTTGAG
GGAGTGGGTGCTCCAGGCGGTGCAAGGCGGCATCGGCGAGCATTTGGCGT
CGCCACAGGAGAGGCAGAAGGTGTGGGAAGGAGTGTGTAGGGTGGGGGAG
GGAGGGAGGGAGGGAGGAAGACGGGAGTTCTTTTCGATGGTCGCGGACTT
TGCGTGGAATTGCCGGGAAAGGGGGAGGAAGTGGAGGAGGAAGGGGTGGG
GGAGGGTAGAGGGACGGAAGGATGGAATACTGGAAGGTTGAGGGATGGAG
GGATTTGGAGGCAGGGGTGGGAAAGGTGGCATGCATGTTAATAGACGGAT
GGGATACCGTACACAGCGTAGGAGAAAATAAGGAGCAGCAAGACAATGAA
ATGAATGTAATAGCTTAGGTGTGTCGAAAAACAACATAAAATAAAGTCTG
CAATATGATTAAA

Coding sequence (CDS) from alignment at chr19:330209..337321-

>NO19G00990.1 ID=NO19G00990.1|Name=NO19G00990.1|organism=Nannochloropsis oceanica|type=CDS|length=3240bp|location=Sequence derived from alignment at chr19:330209..337321- (Nannochloropsis oceanica)
ATGACCGGCCTACCAACGCCGGCGCAGATGGACCCGGCGACCATGCTGCT
CCAGACCCAGGAGGCTCTACGTGTCTTCTATGGCGGGCAAGGCCACAGTC
GGGAGGAGTTCAAGCAAGCCGAAGCATGGCTAGAAGCCTTTCAGCACTAC
CCACAAGCATGGGCCGTGGCGGACGCGATTTTAAGCAACGACAGTTCAAG
TGCTCCTGTTCTTTTCTTTGCGGCAAAAACATTACAGACGAAAGTATACA
TGGATTGGGAGGAGTTGGAGCCGGGCATGATCGAGCCGTTCAAGCAGCAG
TTGGTGAAGCACCTCGCCACCTGGAGTGCCCGCCGTCGGCAAGGAGCCAA
TGGCAGCAGCAGCGGCAGCAGCAGCAGCAGTGGGCGCATGGGGGACTTGA
GTGCGTTTTTGAACCGACTGTGTGTGGTGTTGGCGGCGGTCGCGGTGCAG
ACCAACTGGCAGGGCGTCCTAACGGAGTGCATCAACCTCCTCGCCTCCCA
CGGGGTACCACAGGAACACCTTCTCCACCTCCTCGAAGAGCTGCCCATGG
AAGCCACAAGCAACCAATTTTCTTCCTCCTCGCTCTCTCGTGACGCACAA
GAGCATTTTCGGTGCCAGCTGATGCAGCTCCGCCCGCACGTCTTTGCTTA
CTTGGCAGCAGTGGACGTAGGGGCCGACGCAGGGATCACTTCCCCTGCCA
TGCTCCAGCGGAAGATCTTCCGAGGGATGGGCCGATGGATCACCAACTTC
CGGGAGCTCCCTCCGTCAGACTTGATTGAAAACAAAGTGATTTTGGATGC
CTTTGCAGTCGTTGCGCAAGGGAACAAGAATGGCGGGGACATGTTGTTTG
AGTCGGCGGTCGATCTCCTCATTGACGTTTTCGTGGCACATGACTGCTCC
CGCCCTGACGCCCCTCCCCTTGAGGCCCACCTCTCTCTCGCCTCCTTCCT
TGTCCCCAACGTCTTCGCTCTCCGACCCACCTACCTCGCGGCCCTCCGCC
GCGCCCCCCCTTCCTCCTCCCTCCCCTCCCTCGGCGACGTGGACACAGCC
AAGGGGATATGCATGGTTTTTGTCGAAATGGGCCTTTCGTACCTCCCCCT
CCTCCTCTCCCCCCATCCCTACGAGCAGGATGCCCTCCTTCGGCTCCTCC
TCCTCGCCACCTCCCACCCAGACCCCTCCATCGCCAGCTATGCTCTGCCC
TTTTGGTACGAGCTGGCCAGGGAGGGAGGGAGGGAGGGAGGAGGGCGCGG
CGTCGGTGAGAGGTACGGCGCCGTCCTCCAGGAGCTGGTGGGGGTTTTGG
TGGAGAAGATGGTCTATCCCGAGGAGGCAGGGACCGACGGAAGGATCGAG
GGGGGGCAAGGCGCGGGATGGGACAAGGAGGAGAAAGAGGAGTTTGAAGA
CTTTCGGTTCAAGTTGGGCGACGCCATCAAGGACGTCTGCGCCCTCGTCG
GCCCTGTGCCTTGCCTCTCCCTCCTGGCCCGCTCCCTCCCCACCTCTCTC
CCTCCCTCCCCCCTTCCTCCTCCACCTCATGGCGACACACTCCGACATCA
CCACTGCCATGAGCGTCGTGCCCCAGCTCATTTCCCTCCTCCTTTCCTAT
CACTCCTCGGCCCCTCCCTCCTCCTCGTCCACCCCCCTCCTCCTTCGCGT
CACCACCAATCATGTCCTGGGCCGACTCGCGCCTTTCCTCCTCCCTTCCT
CCCTCCCTCCCTCCCCCCCACGGACCTCCTTCCCAACACCTACTCCTTCC
TCCTCTCGAGCCTCTCCTCCCCCTCTACCTCCTCCTCCGCCGCCCGTGCC
CTCCACGACATCTGCCTGGCCTTTGGCCGCGCCCGCGGCAGCGGCAGCAA
CAGCAGCAACAACAACAGCCCCTCCCTCCTTCCCTCCCTCCCTCCCCTTC
CCTTGTTTGAGCAATTGATGCACGCGTCCCTCCACGGCGAAATCAAATAC
AGGGATGAGGTGATGGTTCTGGAAGGGCTCTGCGAAGGAGTAGTGGCATA
CATGCAGGGAGGGAGGGAGGAAGTGGTGGGGCAGATGGTGGGAATAATCG
GGAAGCATATGGCGGGGGTCTTGCAGGAAGAACAGAGGGAGGGAGGGAGG
GAGGGAGTTAAACCGAGGTTCCAATCGGTGGAGGAGGATCTAGAGAGACT
CACGGCCGTTGTCAAGGGATCCGAGCCCCGGGGCCAGGGAGGGAGGGAGG
GAGGGAAGGATGGAGCGGGGGAGGTTGCCCAAATCGTGCAGGGGCTCTTG
CCGGTCTTGGAAGCCTCATACCAGGCGTATAAAAGCAAGGTGGAAGTGAT
GGAGAAGCTTTGCAAATTCCTCAAGCACGCCATGCGCGCTGCTCGCCCTC
GCGCCTCCTTCTACCCCCTCCTCGAGCCCCTCATCTCCTTCCTTCTCCGC
GGCTTGTCCGAGACCGAACAATCCTCTTTCCTTTATTGCCTGTCGTACGT
TCTCTCAGAATTCGGCCCCCGCCGAAGCAGCAGCAGCAGCAATGGCCTGC
AGCAGCAGCAGCAGCAGCAGCTACTCGCCCGCCTTTTGTTAATGTTCGAA
GAAGTGTCCCAAATCGTCTTCTCCTCCTTCCTGCGAACAGCGGATGATTT
CACGGTAGGGAAGGGAGAAGGGAGGGAGGGAGGCACCCAAGATATAAATC
ATCAATCATCAATCTCTCACCCCTCCATCCCTCCGTCCTTTCATCCGTCC
CTCCCTCTGCCCCTTCCTCCGTCCCTCCGTCCCTCCCTCAGGACCACCCG
GATATCGTGGAGGAGTACTTCTACTTCGCTTCCAAGTACTTCTCGCATTG
CCCCCTTCAACTGGCGGCCCGCTGCCAACGGGGAGAGATGCAGATGCCGG
CCCTCCCTCAGACACTGCTTCATACAGCGATGGTCGGTTTCGTCACTCTC
CAGCATAAGGATGCTCAACGAGCCATTGTCCACTTTCTTGAAACCTTCCT
CTCGGCCGGCCTCGATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCTC
TGCAAGAAACACACGCCTGGATCCTGTCCCTCCTCCACCTCCCCAACGAG
ACCCAGTCCAACCTCCCCCCCTTCCTCGGGCCCGCCCTCCTCTTCAAGCT
ATTCCAGGGCCTGGCCGGGGAGATCGACGACACGCTCATTACGGACGAGG
ACGATCCTTGCCTCTGCGGTGTCCTCTACGCGGCCGCGAGATGCTTGGCA
CCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTGTTGA

Synonyms

Publications