NO19G00490.1, NO19G00490.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G00490.1
Unique Name	NO19G00490.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2808
Alignment location	chr19:185223..190081 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:185223..190081 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO19G00490.1 vs.
Match: XP_008606125.1 (CMGC/MAPK protein kinase [Saprolegnia diclina VS20]; EQC40426.1 CMGC/MAPK protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 513.8 bits (1322), Expect = 1.100e-141
Identity = 251/371 (67.65%), Postives = 302/371 (81.40%), Query Frame = 0

Query:  179 EGEEGEKEGGK-------TYTFKVSGTVFEIDKRYEMIRPIGSGAYGVVISATDREAGRKVAIKKVSRAFDDVVDAKRILREIKLLRHFRHENIISVLDILPPPSLSAFEDVYIVSDLMETDLHRIIYSRQPLSIDHVQYFVYQVLRALKYMHSANVLHRDLKPSNLLLNSNCDLKVCDLGLARGLGLEEEGEGAQDLTEYVVTRWYRAPEIMLACPEYTKAIDIWSVGCIFAELLQRQPLFPGNDYIDQLRLICSKLGRPAEGDMHFITSARARRFLSSLPPTPPTPMPSLFPDRDVRALDLLGKMLQFNPSSRLTVEEALAHPFMESLHNKEDEPSTDALFSFDFEKEKLDKARLQRLIFCEMLHFHPE 543
            EG   E+ GGK       T++F VSGT F++D +Y+ I+P+G GAYGVVISA + E   KVAIKKVS+AF+D++DAKRILREIKLLRHF HENII+++D+LPPPSL+ FEDVYI+SDLMETDLHRIIYSRQPLS DHVQYF+YQ+LRALKY+HS+NVLHRDLKPSNLLLNSNCDLKVCD GLARG+   E  E   +LTEYVVTRWYRAPEIML+  EYTKAIDIWS GCIFAELL R+P+FPG+DYI QL++IC KLG P+E ++HF+TS +ARRF+   P  P  P+  LFP+    ALDLL KML F+P+ R++VEEAL HP++ESLHN +DEP +   FSFDFEKE+L K RLQ LIF E+ HFHP+
Sbjct:    8 EGMAVEESGGKEIIMRPGTHSFVVSGTTFQVDTKYKFIKPVGHGAYGVVISAQNTETDEKVAIKKVSKAFEDLIDAKRILREIKLLRHFDHENIITIVDLLPPPSLAHFEDVYIISDLMETDLHRIIYSRQPLSDDHVQYFLYQILRALKYIHSSNVLHRDLKPSNLLLNSNCDLKVCDFGLARGV---EPDEDNMELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPSEEELHFVTSEKARRFMKGQPNKPKVPLDKLFPNAKANALDLLDKMLVFDPTKRISVEEALEHPYLESLHNNDDEPKSTKPFSFDFEKEQLTKRRLQELIFGEVCHFHPD 375

The following BLAST results are available for this feature:

BLAST of NO19G00490.1 vs.

BLAST of NO19G00490.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_008606125.1	1.100e-141	67.65	CMGC/MAPK protein kinase [Saprolegnia diclina VS20...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO19G00490	NO19G00490	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO19G00490.1	NO19G00490.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO19G00490.1.cds1	NO19G00490.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds2	NO19G00490.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds3	NO19G00490.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds4	NO19G00490.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds5	NO19G00490.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds6	NO19G00490.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds7	NO19G00490.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds8	NO19G00490.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds9	NO19G00490.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds10	NO19G00490.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G00490.1.cds11	NO19G00490.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr19:185223..190081-
coding sequence from alignment at chr19:185223..190081-

mRNA sequence

>NO19G00490.1 ID=NO19G00490.1|Name=NO19G00490.1|organism=Nannochloropsis oceanica|type=mRNA|length=2808bp
ATGCAAGGACGAGTCGGACACGGAGAAGTATTTCCTCCTCCTCAACCCCA
GCGCGCCACTCGCGCCTCCACAGCATCCGCAGCACTCCTACGTCAACGGC
AAGCAATCCTAGCTGCAGCGGGGCCAGGAGGAGAGTCAACAGCAGGAGTA
GAAGCAGGAGCCCTTCCACCCCCACATCCGGCTTCGGCCCCTGCAGCGTC
CTCCTCTGCAACCTTACAGTACCCTAACCCTGGCCGGTTCGCAGGAAAGG
GCGAAGACGAGCAGCAGCAGTCGCAGCAGCAGCAGCAGCAAGGAGGTGGC
TTTAGACATTGTGAAGGAAGTACTAGCGGTGAGAACCAGTGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACAAGCACGGGTCGACGTC
GAGCGGCACCGGAGGGTGGGAGGGAGGAGGGGAAGGAAGGTGAGGAGGAG
GGAGAGAGGCCGCCACGGTCCAAGAGCTTGCCTCGACGCGAGGAGGAGGA
CGAGAGGGAGGATGAAGGGCGGATGAAAATGATGGAGGGAGAGGAGGGAG
AGAAGGAGGGAGGGAAGACGTATACGTTCAAGGTGTCGGGGACAGTGTTC
GAGATCGATAAGCGCTACGAGATGATTCGACCGATAGGCTCAGGTGCCTA
TGGAGTGGTCATCTCTGCCACGGACCGGGAAGCAGGGCGCAAGGTGGCCA
TCAAAAAGGTATCTCGGGCTTTTGACGACGTCGTGGACGCCAAGCGGATT
TTGCGGGAGATCAAGTTATTAAGGCATTTTAGGCATGAAAATATCATCAG
TGTCCTGGACATCCTCCCCCCGCCCTCCCTCTCGGCCTTCGAAGACGTCT
ACATTGTCTCGGACCTGATGGAAACCGACCTCCACCGCATCATTTATTCG
CGCCAGCCCCTCTCCATCGATCACGTGCAGTACTTCGTGTACCAGGTCCT
TCGCGCACTCAAGTACATGCACTCAGCCAACGTCCTCCATCGAGACCTCA
AGCCATCCAATCTCCTACTCAATAGTAATTGCGACCTGAAAGTCTGTGAC
TTGGGCTTGGCCCGGGGTTTGGGCCTAGAGGAGGAAGGAGAGGGCGCGCA
GGACCTGACCGAATACGTCGTTACGCGATGGTACCGGGCTCCAGAGATAA
TGTTGGCCTGTCCGGAATACACCAAAGCTATTGATATATGGTCCGTTGGC
TGCATCTTTGCCGAGCTGCTTCAACGGCAGCCGCTTTTCCCCGGAAATGA
CTACATCGATCAGCTCCGCCTCATTTGCAGCAAATTGGGTCGACCGGCCG
AAGGGGACATGCACTTCATCACCTCGGCGAGGGCCAGGAGGTTCCTTTCC
TCTCTCCCTCCCACCCCTCCCACACCCATGCCTTCCCTTTTCCCCGACCG
GGACGTGCGGGCATTGGACCTGTTGGGGAAAATGCTGCAGTTCAATCCGA
GTAGCCGGCTGACGGTAGAGGAGGCCCTGGCCCACCCCTTCATGGAATCG
CTCCACAACAAAGAAGACGAGCCCAGCACCGACGCCCTCTTCTCCTTCGA
CTTCGAGAAGGAAAAGCTGGACAAGGCCCGGCTGCAGCGCCTCATCTTCT
GTGAAATGCTCCACTTCCATCCCGAGGAACGACACCAGCACCAGCTACAA
CAACAACAACCACAACAACAACAGCAACAGTACCAAACCCACTATCCCTC
CGCTTCTCCCCTTGTCAATTATCACTACCAACTCCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCATCCTTCCTCGATACCGCTCCCCCTTTCC
TCGCTTCCCTCCCTTCCTTCATCATCTCAGCCCTCCGCGACTTCATCCTA
CATGTATCATCAGCAACTCCACCACCACCAGCAGCAGCAGCACCAGCAGC
AGCATGTTGCCTACGTGCACCTCCACTCCGCTCTTCCCTCCTCCCTCCCC
CCCGCCATTCCCAACCGCAGCTGGAGCGAAAGCAGTAACAGCAGTAGTAA
CAGTAAGGGCAGCACCAGCAGTGGGAGCAGCTCTAGCACCAGCTCCAGCA
GCACTAGCAGTAGCAGCAGCAGCAACCCTTACAGCACGACATACAGTCAT
GCCTCCTACTCCGCCCCTCCCCCCGGCTACACACAAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGCACCGGGCCTCACTAGCAGCCACCTTG
GCAGTACCTTGATGGGCACCAATAGCAACAGCGGCACCAGCACCAGCAAT
AGCAATAGCACCACCACCAGTAGCAGCAGCTACCTTTCCGCTTTCCCTCC
TCAGACCTTCTCTCCTTTCCAGCACCACCACGACCCGGCCGCTGCCATGG
GAGCCGCCGCAGCTGCCTTGGGGCCTTCCCCTTCCTTCCCCCATCCCTCC
TTCTCATCTTCTTTGGGAGGGATGATGCGCGATGCTCACATCAGCACCAA
CACCAGCACCAGCTCAAGCAGTCATCACATCCACCCCTATCCGCAGCAGC
AACAACAGCAGCAGCATGACAGTGGCGTACTCAACAGCTGCAGCAGCAGC
AGCAGCAGCAGCATTCCGCCCACCTCGTCCTCCCTCCCGCCCTCTGACCA
CGCAGCCTACTTTCCTCCTTCCTGCGGTGGGGGAGGGGGATCAGTCCCAA
GGGGGGGTTGCAACGACGCAGTGAGGGAGGGAGGGCTTCTCCCCCATCAG
CTGCAGCAGCCGCAGCAACAGCAGCAGCAGCAGCACCCTCCTCCTGCTTA
CCCTCACCCACACGCGGCCCAGCAGCAGCCACCGCCGCACTACCACTGCC
AGCTGTAG

protein sequence of NO19G00490.1

>NO19G00490.1-protein ID=NO19G00490.1-protein|Name=NO19G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=936bp
MQGRVGHGEVFPPPQPQRATRASTASAALLRQRQAILAAAGPGGESTAGV
EAGALPPPHPASAPAASSSATLQYPNPGRFAGKGEDEQQQSQQQQQQGGG
FRHCEGSTSGENQCSSSSSSSSSSSSRTSTGRRRAAPEGGREEGKEGEEE
GERPPRSKSLPRREEEDEREDEGRMKMMEGEEGEKEGGKTYTFKVSGTVF
EIDKRYEMIRPIGSGAYGVVISATDREAGRKVAIKKVSRAFDDVVDAKRI
LREIKLLRHFRHENIISVLDILPPPSLSAFEDVYIVSDLMETDLHRIIYS
RQPLSIDHVQYFVYQVLRALKYMHSANVLHRDLKPSNLLLNSNCDLKVCD
LGLARGLGLEEEGEGAQDLTEYVVTRWYRAPEIMLACPEYTKAIDIWSVG
CIFAELLQRQPLFPGNDYIDQLRLICSKLGRPAEGDMHFITSARARRFLS
SLPPTPPTPMPSLFPDRDVRALDLLGKMLQFNPSSRLTVEEALAHPFMES
LHNKEDEPSTDALFSFDFEKEKLDKARLQRLIFCEMLHFHPEERHQHQLQ
QQQPQQQQQQYQTHYPSASPLVNYHYQLQQQQQQQQQQQQHPSSIPLPLS
SLPSLPSSSQPSATSSYMYHQQLHHHQQQQHQQQHVAYVHLHSALPSSLP
PAIPNRSWSESSNSSSNSKGSTSSGSSSSTSSSSTSSSSSSNPYSTTYSH
ASYSAPPPGYTQGREGGREGGREGAPGLTSSHLGSTLMGTNSNSGTSTSN
SNSTTTSSSSYLSAFPPQTFSPFQHHHDPAAAMGAAAAALGPSPSFPHPS
FSSSLGGMMRDAHISTNTSTSSSSHHIHPYPQQQQQQQHDSGVLNSCSSS
SSSSIPPTSSSLPPSDHAAYFPPSCGGGGGSVPRGGCNDAVREGGLLPHQ
LQQPQQQQQQQHPPPAYPHPHAAQQQPPPHYHCQL*

mRNA from alignment at chr19:185223..190081-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO19G00490.1 ID=NO19G00490.1|Name=NO19G00490.1|organism=Nannochloropsis oceanica|type=mRNA|length=4859bp|location=Sequence derived from alignment at chr19:185223..190081- (Nannochloropsis oceanica)
ATGCAAGGACGAGTCGGACACGGAGAAGTATTTCCTCCTCCTCAACCCCA
GCGCGCCACTCGCGCCTCCACAGCATCCGCAGCACTCCTACGTCAACGGC
AAGCAATCCTAGCTGCAGCGGGGCCAGGAGGAGAGTCAACAGCAGGAGTA
GAAGCAGGAGCCCTTCCACCCCCACATCCGGCTTCGGCCCCTGCAGCGTC
CTCCTCTGCAACCTTACAGTACCCTAACCCTGGCCGGTTCGCAGGAAAGG
GCGAAGACGAGCAGCAGCAGTCGCAGCAGCAGCAGCAGCAAGGAGGTGGC
TTTAGACATTGTGAAGGAAGTACTAGCGGTGAGAACCAGTGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACAAGCACGGGTCGACGTC
GAGCGGCACCGGAGGGTGGGAGGGAGGAGGGGAAGGAAGGTGAGGAGGAG
GGAGAGAGGCCGCCACGGTCCAAGAGCTTGCCTCGACGCGAGGAGGAGGA
CGAGAGGGAGGATGAAGGGCGGATGAAAATGATGGAGGGAGAGGAGGGAG
AGAAGGAGGGAGGGAAGACGTATACGTTCAAGGTGTCGGGGACAGTGTTC
GAGATCGATAAGCGCTACGAGATGATTCGACCGATAGGCTCAGGTGCCTA
TGGAGTGGTCATGTGAGTCAGAAGGAGAGGGAGGGAGGACGGGATGGCAG
GAGGGAGGGAGGGAGGACAGTGTTTTCTCTGCATTTTTCTCTATTTCCCA
CTCTCAAACTAGTCCGCACCTGACTCAATCCCTTCTCATGCATTCCTCCC
TCCTTCTCTTCCTCTCTCCCTCCTTCCCAGCTCTGCCACGGACCGGGAAG
CAGGGCGCAAGGTGGCCATCAAAAAGGTATCTCGGGCTTTTGACGACGTC
GTGGACGCCAAGCGGATTTTGCGGGAGATCAAGTTATTAAGGCATTTTAG
GCATGAAAATGTAAGAAAGGGAGCGAGGGAGGGAGCTAGGGAGGAGGCGG
GTGCCACGAGTGACTTTCGCTTTTGACCATGCTGTTTTTTTCCTTCCTTC
CTCTCCTTTTCTTCTCTTCCGTCGCTTCCTTCCTCCCTCCCTCCGGCGCT
ATTTCCCATTACAGGCATAACTTTCATTATATCATCCAGCTATTCGAAGT
CAGGAAAGGTTGCTCACCCGTACCTCTCTCTTTCTCTCCCTCTCTCCCTC
ACTCCCTCTATTCTCAGATCATCAGTGTCCTGGACATCCTCCCCCCGCCC
TCCCTCTCGGCCTTCGAAGACGTCTACATTGTCTCGGACCTGATGGAAAC
CGACCTCCACCGCATCATTTATTCGCGCCAGCCCCTCTCCATCGATCACG
TGCAGTACTTCGTGTACCAGGTGCCTGGGTTCTCCCTCCTTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTTCGCTGCACGCGGCATTTTCCTTCTTG
TCTCGTATTTTCCCCTCTATTTCTCCCGCCCTCCTTTCCTCTCTCCTCTC
CTCAACTTCCTGTTTTGTCTCCTCCTTTCCTTCCCTGTCCTGTCATCTCA
TTTCCCCTTATTCATACCCCAGGTCCTTCGCGCACTCAAGTACATGCACT
CAGCCAACGTCCTCCATCGAGACCTCAAGGTATTCCCTTCCTTCCTTCTC
TCCCTCCCTTTTTTCCTGTCCGCTCCCTCCTGTATACTCCCTCCTCGACA
CTTGCCTCCCACCCCTATCCCAATCAATCCAAAGGCACTCACCTCCCTCC
TATATCCCCCATTCCGTATCCCACATCCCACATCCCATACCCCGTATCCC
ATATCCCATATGCCACATCCCATACCCCGTATCCCATATCCCATATCCCA
TATCCCACATCGCACATCCCATACCCCGTATCCCATACCCCGTATCCCAT
ATCCCACATCGCTCATCCCACATCCCACGCCCCATATCCCACATCCCAGG
TCCAATATCCCATGTCCAATATCCCACATCCCACATCCCACATCCCATGC
CCCATACCCCACCATACTCCATATCCCCCCCCCCAGCCATCCAATCTCCT
ACTCAATAGTAATTGCGACCTGAAAGTCTGTGACTTGGGCTTGGCCCGGG
GTTTGGGCCTAGAGGAGGAAGGAGAGGGCGCGCAGGTACGAAGGGAGGGA
GGGAGGGAGGGGGGGAGGAAGGGAGGGAGGGAAGGGAAGGAGGGAGGGAA
GATCATATGAAAGGAAGAGTGAGTCGACGTTGTCCTGTACGCCCCCCCCA
ATCCTCCCTTCCTCCCTCCCTCCCTCCCTTGTTCCCTCCCTCCCTCAGGA
CCTGACCGAATACGTCGTTACGCGATGGTACCGGGCTCCAGAGATAATGT
TGGCCTGTCCGGAATACACCAAAGCTATTGATATATGGGTCAGTACAAGC
CCGCCCGCCCTCCCTCCTTCCTTTCTTCCCTCCTTCCCTCCCTCCCCTCC
CTCTCCTATGTCCCCTTCGCCCTTTTCTTCCACCTCACCATCCCTCACTC
ACTCACTCACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCTC
TCATAGTCCGTTGGCTGCATCTTTGCCGAGCTGCTTCAACGGCAGCCGCT
TTTCCCCGGAAATGACTACATCGATCAGCTCCGCCTCATTTGCAGCAAAT
TGGGTCGACCGGCCGAAGGGGACATGCACTTCATCACCTCGGCGAGGGCC
AGGAGGTAGGGAGGGAGGGAGCGAGAAGGGGAGGGAGGGAGCGGGGGAGG
GAGGGGAGGGAAGGTAACTCATGTCAGGGATGATCCTCTTTCTTATGCAC
CGACATACCGCCTGCTCACAGAACCCCCCTCCTCCCTCCTTCCTTTCCCT
TTCTCCCCCCCTCCTCTCTTGTGCATCAGGTTCCTTTCCTCTCTCCCTCC
CACCCCTCCCACACCCATGCCTTCCCTTTTCCCCGACCGGGACGTGCGGG
CATTGGACCTGTTGGGGAAAATGCTGCAGTTCAATCCGAGTAGCCGGCTG
ACGGTAGAGGAGGTAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
CGGGAAATAGGGAGGGAAAGCACCTGTGGATCGGGTCTGAGGAGGGGCCT
TAAACCCGATAGATATTCATTGGACCTCCCTCCCTCCCTCCCCCCTCCCT
CCATCCCTCCTTCCCCCAGGCCCTGGCCCACCCCTTCATGGAATCGCTCC
ACAACAAAGAAGACGAGCCCAGCACCGACGCCCTCTTCTCCTTCGACTTC
GAGAAGGAAAAGCTGGACAAGGCCCGGCTGCAGGTAGGGATGGGAGGGAG
GGAGGGAGGGAGGGACAGGAGGAATCCTTGGACCCATTAGTTTCTGTTTG
TTTTCATTCATCTGTCTGACTCCCCTCCCTCTTTCCCCCCCTCCCTCCCC
CAGCGCCTCATCTTCTGTGAAATGCTCCACTTCCATCCCGAGGAACGAGT
AAACCTCCCTCCCACCCCTCCCCCGCGCCCTCCCTCGATCCCTCCCCCCG
GCCCTCCCACCTCTTCTCCCCACCCTCCCACCCACCCGTCGCCAGCAGCA
GCAGCGATGGGCGTCTCTCCTTCTCCATTCCCTCCGCCCCCTGGGCCCCC
CGTCGCTTCCTCCTCCTCCTCCAACTTTTCCCTAACAACACCCGCCGCAG
CCGCCGCTGCCAGTGCAGTCATGATCTCTCCAGCACCAGCACCAGCTACA
ACAACAACAACCACAACAACAACAGCAACAGTACCAAACCCACTATCCCT
CCGCTTCTCCCCTTGTCAATTATCACTACCAACTCCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCATCCTTCCTCGATACCGCTCCCCCTTTC
CTCGCTTCCCTCCCTTCCTTCATCATCTCAGCCCTCCGCGACTTCATCCT
ACATGTATCATCAGCAACTCCACCACCACCAGCAGCAGCAGCACCAGCAG
CAGCATGTTGCCTACGTGCACCTCCACTCCGCTCTTCCCTCCTCCCTCCC
CCCCGCCATTCCCAACCGCAGCTGGAGCGAAAGCAGTAACAGCAGTAGTA
ACAGTAAGGGCAGCACCAGCAGTGGGAGCAGCTCTAGCACCAGCTCCAGC
AGCACTAGCAGTAGCAGCAGCAGCAACCCTTACAGCACGACATACAGTCA
TGCCTCCTACTCCGCCCCTCCCCCCGGCTACACACAAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGCACCGGGCCTCACTAGCAGCCACCTT
GGCAGTACCTTGATGGGCACCAATAGCAACAGCGGCACCAGCACCAGCAA
TAGCAATAGCACCACCACCAGTAGCAGCAGCTACCTTTCCGCTTTCCCTC
CTCAGACCTTCTCTCCTTTCCAGCACCACCACGACCCGGCCGCTGCCATG
GGAGCCGCCGCAGCTGCCTTGGGGCCTTCCCCTTCCTTCCCCCATCCCTC
CTTCTCATCTTCTTTGGGAGGGATGATGCGCGATGCTCACATCAGCACCA
ACACCAGCACCAGCTCAAGCAGTCATCACATCCACCCCTATCCGCAGCAG
CAACAACAGCAGCAGCATGACAGTGGCGTACTCAACAGCTGCAGCAGCAG
CAGCAGCAGCAGCATTCCGCCCACCTCGTCCTCCCTCCCGCCCTCTGACC
ACGCAGCCTACTTTCCTCCTTCCTGCGGTGGGGGAGGGGGATCAGTCCCA
AGGGGGGGTTGCAACGACGCAGTGAGGGAGGGAGGGCTTCTCCCCCATCA
GCTGCAGCAGCCGCAGCAACAGCAGCAGCAGCAGCACCCTCCTCCTGCTT
ACCCTCACCCACACGCGGCCCAGCAGCAGCCACCGCCGCACTACCACTGC
CAGCTGTAG

Coding sequence (CDS) from alignment at chr19:185223..190081-

>NO19G00490.1 ID=NO19G00490.1|Name=NO19G00490.1|organism=Nannochloropsis oceanica|type=CDS|length=2808bp|location=Sequence derived from alignment at chr19:185223..190081- (Nannochloropsis oceanica)
ATGCAAGGACGAGTCGGACACGGAGAAGTATTTCCTCCTCCTCAACCCCA
GCGCGCCACTCGCGCCTCCACAGCATCCGCAGCACTCCTACGTCAACGGC
AAGCAATCCTAGCTGCAGCGGGGCCAGGAGGAGAGTCAACAGCAGGAGTA
GAAGCAGGAGCCCTTCCACCCCCACATCCGGCTTCGGCCCCTGCAGCGTC
CTCCTCTGCAACCTTACAGTACCCTAACCCTGGCCGGTTCGCAGGAAAGG
GCGAAGACGAGCAGCAGCAGTCGCAGCAGCAGCAGCAGCAAGGAGGTGGC
TTTAGACATTGTGAAGGAAGTACTAGCGGTGAGAACCAGTGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACAAGCACGGGTCGACGTC
GAGCGGCACCGGAGGGTGGGAGGGAGGAGGGGAAGGAAGGTGAGGAGGAG
GGAGAGAGGCCGCCACGGTCCAAGAGCTTGCCTCGACGCGAGGAGGAGGA
CGAGAGGGAGGATGAAGGGCGGATGAAAATGATGGAGGGAGAGGAGGGAG
AGAAGGAGGGAGGGAAGACGTATACGTTCAAGGTGTCGGGGACAGTGTTC
GAGATCGATAAGCGCTACGAGATGATTCGACCGATAGGCTCAGGTGCCTA
TGGAGTGGTCATCTCTGCCACGGACCGGGAAGCAGGGCGCAAGGTGGCCA
TCAAAAAGGTATCTCGGGCTTTTGACGACGTCGTGGACGCCAAGCGGATT
TTGCGGGAGATCAAGTTATTAAGGCATTTTAGGCATGAAAATATCATCAG
TGTCCTGGACATCCTCCCCCCGCCCTCCCTCTCGGCCTTCGAAGACGTCT
ACATTGTCTCGGACCTGATGGAAACCGACCTCCACCGCATCATTTATTCG
CGCCAGCCCCTCTCCATCGATCACGTGCAGTACTTCGTGTACCAGGTCCT
TCGCGCACTCAAGTACATGCACTCAGCCAACGTCCTCCATCGAGACCTCA
AGCCATCCAATCTCCTACTCAATAGTAATTGCGACCTGAAAGTCTGTGAC
TTGGGCTTGGCCCGGGGTTTGGGCCTAGAGGAGGAAGGAGAGGGCGCGCA
GGACCTGACCGAATACGTCGTTACGCGATGGTACCGGGCTCCAGAGATAA
TGTTGGCCTGTCCGGAATACACCAAAGCTATTGATATATGGTCCGTTGGC
TGCATCTTTGCCGAGCTGCTTCAACGGCAGCCGCTTTTCCCCGGAAATGA
CTACATCGATCAGCTCCGCCTCATTTGCAGCAAATTGGGTCGACCGGCCG
AAGGGGACATGCACTTCATCACCTCGGCGAGGGCCAGGAGGTTCCTTTCC
TCTCTCCCTCCCACCCCTCCCACACCCATGCCTTCCCTTTTCCCCGACCG
GGACGTGCGGGCATTGGACCTGTTGGGGAAAATGCTGCAGTTCAATCCGA
GTAGCCGGCTGACGGTAGAGGAGGCCCTGGCCCACCCCTTCATGGAATCG
CTCCACAACAAAGAAGACGAGCCCAGCACCGACGCCCTCTTCTCCTTCGA
CTTCGAGAAGGAAAAGCTGGACAAGGCCCGGCTGCAGCGCCTCATCTTCT
GTGAAATGCTCCACTTCCATCCCGAGGAACGACACCAGCACCAGCTACAA
CAACAACAACCACAACAACAACAGCAACAGTACCAAACCCACTATCCCTC
CGCTTCTCCCCTTGTCAATTATCACTACCAACTCCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCATCCTTCCTCGATACCGCTCCCCCTTTCC
TCGCTTCCCTCCCTTCCTTCATCATCTCAGCCCTCCGCGACTTCATCCTA
CATGTATCATCAGCAACTCCACCACCACCAGCAGCAGCAGCACCAGCAGC
AGCATGTTGCCTACGTGCACCTCCACTCCGCTCTTCCCTCCTCCCTCCCC
CCCGCCATTCCCAACCGCAGCTGGAGCGAAAGCAGTAACAGCAGTAGTAA
CAGTAAGGGCAGCACCAGCAGTGGGAGCAGCTCTAGCACCAGCTCCAGCA
GCACTAGCAGTAGCAGCAGCAGCAACCCTTACAGCACGACATACAGTCAT
GCCTCCTACTCCGCCCCTCCCCCCGGCTACACACAAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGCACCGGGCCTCACTAGCAGCCACCTTG
GCAGTACCTTGATGGGCACCAATAGCAACAGCGGCACCAGCACCAGCAAT
AGCAATAGCACCACCACCAGTAGCAGCAGCTACCTTTCCGCTTTCCCTCC
TCAGACCTTCTCTCCTTTCCAGCACCACCACGACCCGGCCGCTGCCATGG
GAGCCGCCGCAGCTGCCTTGGGGCCTTCCCCTTCCTTCCCCCATCCCTCC
TTCTCATCTTCTTTGGGAGGGATGATGCGCGATGCTCACATCAGCACCAA
CACCAGCACCAGCTCAAGCAGTCATCACATCCACCCCTATCCGCAGCAGC
AACAACAGCAGCAGCATGACAGTGGCGTACTCAACAGCTGCAGCAGCAGC
AGCAGCAGCAGCATTCCGCCCACCTCGTCCTCCCTCCCGCCCTCTGACCA
CGCAGCCTACTTTCCTCCTTCCTGCGGTGGGGGAGGGGGATCAGTCCCAA
GGGGGGGTTGCAACGACGCAGTGAGGGAGGGAGGGCTTCTCCCCCATCAG
CTGCAGCAGCCGCAGCAACAGCAGCAGCAGCAGCACCCTCCTCCTGCTTA
CCCTCACCCACACGCGGCCCAGCAGCAGCCACCGCCGCACTACCACTGCC
AGCTGTAG

Synonyms

Publications