NO18G01190.1, NO18G01190.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO18G01190.1
Unique Name	NO18G01190.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3249
Alignment location	chr18:411560..416880 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr18	genome	chr18:411560..416880 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO18G01190.1 vs.
Match: XP_005855969.1 (multidrug oligosaccharidyl-lipid polysaccharide flippase [Nannochloropsis gaditana CCMP526]; EKU20378.1 multidrug oligosaccharidyl-lipid polysaccharide flippase [Nannochloropsis gaditana CCMP526]; EWM23306.1 multidrug oligosaccharidyl-lipid polysaccharide flippase [Nannochloropsis gaditana])

HSP 1 Score: 796.6 bits (2056), Expect = 9.700e-227
Identity = 432/591 (73.10%), Postives = 481/591 (81.39%), Query Frame = 0

Query:  477 LPRKWWTREVKDEVKHIWSVLWPIALTNALLMSLQIEDQIILGRIGVDELAASALGTTLFNLAWFFLAGAASAVDTLVAQAFGARDYAACEYWTRIGYLLMTLLSLPAMIIFQYGEWVIHTVLRQDEHLAHLAGQYTKLLLPGLWPLCMFVTMQKSMQARNVLMPSLYIMLLANFLNVGGNYLFIYALDMGFPGSPLATSTSRILTCLLTAIYYYFLMPEAHPQSVQGQTCLEGEGVRGKESDDILSGKQWPQQQHRTGVNGNGGSSKSSCSTSSSTSSSSSSSSSKAAAEDESLRQPLLLSSSSLDSPSSSSAFSSVPNSLPPSAPTADTAAAVAGKVLFREALWRFMRLAVPGGFMVGLEAWSFDFTTSFAAQFGTEALDAHQSMMSISAFTYLTVPLAISIAASIRVGNLLGAQRPTQARLAAKICLVIGVATMLLCGMVLVLLRGVLGNIFTPDAKVVKIVSQLCPIMALYQVFDGFQGVSAGVLRGMGRQTRVALLNLGGFWVLGLPGGALLAFYFDLGVYGIWWGFVMGLALISLLYLRALSQLDFAAEARRAL-NACTDQKLEQAWEATVEQEK-MEREGGVEA 1066
            LP++WWT EV+DEV HIWS+LWPIA+TNALLM+LQIEDQIILGRIGVDELAASALGTTLFNLAWFFLAGAASAVDTLVAQAFGARDY ACEYWTRIGYLLMTL SLPAM+IFQYGEWV+ TV RQ+EHL+HLAG+YT+LLLPGLWPLCMFV MQKSMQARNVLMPSLY+MLLAN +NVGGNYLF+YAL MGF GSPLATSTSRILTC LT +YYY +MP+  P+++QG++C     ++G+E   IL+ +    Q     V G GG +  S                        L+QPLL   S +   SSS          PP  P      A  G+  FREAL RF+RLA+PGGFMVGLEAWSFDFTTSFAAQFGTEALDAHQSMMSISAFTYLTVPLAIS+AASIRVGNLLGAQRP QA+LAA+ICL IGVATMLLCG+VLVLLRG LG IFTPDAKV KIVS+LCPIMALYQVFDGFQGVSAG+LRGMGRQTRVALLNLGGFWVLGLPGGA+LAF   +GVYGIWWGFVMGLALIS+LYL ALS+LDF  EARRAL +ACTDQKLE AWE  V+ EK ++REGG+ A
Sbjct:    5 LPKRWWTPEVRDEVSHIWSILWPIAVTNALLMALQIEDQIILGRIGVDELAASALGTTLFNLAWFFLAGAASAVDTLVAQAFGARDYEACEYWTRIGYLLMTLFSLPAMVIFQYGEWVVRTVFRQEEHLSHLAGRYTQLLLPGLWPLCMFVCMQKSMQARNVLMPSLYVMLLANLINVGGNYLFVYALGMGFTGSPLATSTSRILTCALTGVYYYSVMPKTRPRALQGRSC--SADLQGEEPGSILTDRDTDGQVWGAEVRGVGGPASGS------------------------LQQPLL---SEVGYASSSE---------PPPEPAG--GEAFPGRTPFREALCRFLRLAIPGGFMVGLEAWSFDFTTSFAAQFGTEALDAHQSMMSISAFTYLTVPLAISVAASIRVGNLLGAQRPEQAKLAARICLFIGVATMLLCGLVLVLLRGSLGEIFTPDAKVAKIVSKLCPIMALYQVFDGFQGVSAGILRGMGRQTRVALLNLGGFWVLGLPGGAILAFTLRMGVYGIWWGFVMGLALISILYLWALSRLDFEVEARRALQSACTDQKLEHAWEQRVDHEKQVKREGGIVA 555

The following BLAST results are available for this feature:

BLAST of NO18G01190.1 vs.

BLAST of NO18G01190.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005855969.1	9.700e-227	73.10	multidrug oligosaccharidyl-lipid polysaccharide fl...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO18G01190	NO18G01190	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO18G01190.1	NO18G01190.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO18G01190.1.cds1	NO18G01190.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds2	NO18G01190.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds3	NO18G01190.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds4	NO18G01190.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds5	NO18G01190.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds6	NO18G01190.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds7	NO18G01190.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds8	NO18G01190.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds9	NO18G01190.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G01190.1.cds10	NO18G01190.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr18:411560..416880+
coding sequence from alignment at chr18:411560..416880+

mRNA sequence

>NO18G01190.1 ID=NO18G01190.1|Name=NO18G01190.1|organism=Nannochloropsis oceanica|type=mRNA|length=3249bp
ATGTCTTACCATCAAGACCGGTCGGCTTGGGTGGGAGGAGGCCATAGCGG
AGGGGCAAGCGGAGGGAACAATCACAGCGGGAGGCCGTGGTCCTCCTCTT
CTTCAGCTTCTTTCTATTTTGGTCAGAAGCGGGGCCGCAGTGACGAGATG
TTGGGGCTGGCAAGAAGCAGAAGCACAGAGAGTGACCGGAGCAGCAGTGC
CAGCCATAATCAAGGCGGTCCTCGATGTGCGGAAGGAGGGGGAGGAGGTT
GGGGACGAGGGGCAAATAGAGGAGGAGCAGACCCAACTTTGACGATTGCA
CGACTGCAACAAGACCTTGAAACTAGGGATGAAGCTGGCGAAGAACAACC
TGTTTGTATGCAGATGGACAAGGAAATTGTGCTTAGGAACCTAAGGTTTC
AGAATGGAAAAGCGCTAAAGAACCTACAGGTAGAGAAGGAGAAAGCGCTG
GAGAACCTGCAGCTCGAGAATGAGAAAGCGCAAAAAGAGGCTAAGGCGAC
GCTGGCTGTAAATGAAAAAGGCTTGGCGCGGATGCAGGAGAAGCGAGATG
CAATGCGGAAGGAGCGAGATGAAATGAGGGAGGAGCTAGATGCAATGCGG
GAGGAGCTAGATGAAATGCGGGAGGAGCGAGATGCAATGCGGGAGGAGCG
GGACGCAATCGAGGAGGAGCGGGATACCGGGGTGAGCAATCTGGACGAGT
TGGCCCTGTTGGCGATCGGAAATGGGGCGGTGGCGTCGGCGGCGGAAGGT
GGCTCGGTCGAAGAGGAGGGCGGGAAAGCACCTTCGGAGTGGCAGGTGAA
GGAAAAGGAGAGAGAGGGCGTGACAGAGGAGCCTGAGCCGTTGAGGGCAT
CAAATGAAGCAACGGCAGCAGCAGGAGCAGCAGTCGGGAGTCCTGTGGGG
GCCAGTAGTCATAAAGCGGGTCGCAAAAGTTTAGGCCAGCGGGACCAGGA
GGGGGGGGAAGACGAGGAAGACAAGGTAAAGAGGCTGAAAGCAGAGCTGG
TGGCGACGGAGGAGCTCTCCAGCAAGCTCAGCATAGAGCTGCGTCAGATG
AATGACGAGCTCGTGCAGATGAAGGACAGATTGATTGCCATGGCGGAAGA
ATTTCACGACCTGGTGCCAGTACACGTGTTTTGCGAAGCCACAGCCGCGG
ACGTGAAAATTGCGTTCGAGAAGTGGGAGGGCTACACTAAGCAGGCGGCC
TTGGTCCAGAAGGTTAACGACGAGTTGGATTCTATTTTGCGCGACCCCCG
CTTCGATCCCTTCATCCGCCGGGATGGCAAGTTGGCGGAAAGATCAAGAA
GCATAAAGTCCTCCAGCGCATCAAGAGGGAGCGAGGCAAGCATCCCACGC
GCTCCACTGCACTCGCCACGAGTCGTCCCCTGGTCGACCCGTGCAGCTTA
CCTTTCGAAAGTCATGACAATGACTTTTCTCCCCCGGAAATGGTGGACCC
GGGAAGTCAAAGATGAAGTCAAGCACATTTGGAGCGTCCTCTGGCCGATC
GCATTAACGAATGCTTTGTTGATGTCCCTGCAGATTGAGGACCAAATTAT
TTTGGGCAGAATAGGGGTGGATGAACTTGCTGCTTCGGCACTAGGCACGA
CACTCTTCAACCTGGCTTGGTTTTTCTTGGCTGGAGCAGCTTCAGCAGTG
GACACATTGGTGGCACAAGCATTCGGTGCTCGAGACTATGCCGCATGCGA
GTACTGGACCCGGATCGGCTACTTGCTCATGACGCTTCTCTCACTCCCCG
CCATGATCATCTTCCAGTACGGCGAGTGGGTCATCCACACGGTCCTTCGC
CAGGACGAGCACCTCGCTCACCTCGCCGGTCAATACACCAAACTCCTCCT
CCCCGGCCTCTGGCCTTTATGTATGTTTGTGACGATGCAAAAATCCATGC
AGGCCCGCAATGTGCTTATGCCTTCGCTATACATCATGCTCCTGGCCAAT
TTCCTGAATGTCGGAGGGAACTATTTGTTCATATACGCGCTTGACATGGG
TTTCCCTGGGTCACCTCTCGCGACCTCAACCAGCCGAATCCTCACCTGTT
TGTTGACTGCCATATACTACTATTTCTTGATGCCTGAGGCACACCCGCAA
TCGGTGCAGGGGCAGACATGTCTGGAGGGAGAAGGCGTGAGGGGGAAGGA
ATCAGACGACATTTTGTCGGGGAAGCAGTGGCCACAGCAGCAGCACAGGA
CTGGTGTAAATGGTAATGGTGGCAGTAGCAAAAGTAGTTGTAGCACCAGC
AGCAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGCCGCCGCGGA
AGACGAATCGTTGCGGCAACCCTTGTTGTTGTCTTCCTCGTCGTTAGACA
GTCCTTCCTCTTCTTCCGCTTTCTCTTCCGTCCCCAACTCCCTCCCGCCT
TCAGCGCCCACTGCAGACACTGCTGCTGCTGTTGCAGGCAAGGTCCTCTT
CAGAGAAGCCCTCTGGCGGTTTATGCGCCTGGCTGTGCCCGGCGGATTCA
TGGTGGGGCTAGAGGCGTGGAGCTTTGATTTCACCACTTCCTTTGCTGCA
CAATTTGGAACGGAAGCACTCGACGCCCATCAGTCCATGATGTCCATCTC
GGCCTTCACTTATTTGACTGTGCCCCTTGCCATCTCCATCGCCGCCTCCA
TCCGTGTGGGCAATCTGTTAGGGGCTCAACGACCGACGCAAGCGCGATTG
GCCGCCAAAATCTGTCTGGTGATCGGCGTGGCGACCATGTTGCTGTGTGG
GATGGTGCTTGTTTTACTGCGCGGGGTGCTTGGCAACATCTTTACGCCCG
ACGCCAAGGTGGTGAAGATCGTGTCGCAGCTGTGTCCGATCATGGCCCTC
TACCAGGTCTTCGATGGCTTTCAGGGTGTCTCCGCCGGTGTTCTTCGCGG
GATGGGGCGACAGACGCGTGTTGCATTGCTCAACTTGGGTGGCTTTTGGG
TGCTAGGGCTGCCCGGCGGGGCGCTTTTGGCCTTCTATTTTGATTTGGGC
GTGTATGGGATTTGGTGGGGCTTCGTCATGGGTCTGGCTTTGATTTCTCT
CTTGTACCTAAGGGCATTGTCCCAGCTGGATTTTGCTGCAGAGGCCAGGA
GGGCTTTAAATGCCTGTACCGATCAGAAACTTGAGCAGGCATGGGAGGCA
ACAGTAGAGCAGGAGAAGATGGAGAGGGAGGGAGGGGTGGAAGCAGCCGC
TCGGGTGGGGTTGGAACATTATACTAAAGGTGGTATTGACAAGGTGTAA

protein sequence of NO18G01190.1

>NO18G01190.1-protein ID=NO18G01190.1-protein|Name=NO18G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1083bp
MSYHQDRSAWVGGGHSGGASGGNNHSGRPWSSSSSASFYFGQKRGRSDEM
LGLARSRSTESDRSSSASHNQGGPRCAEGGGGGWGRGANRGGADPTLTIA
RLQQDLETRDEAGEEQPVCMQMDKEIVLRNLRFQNGKALKNLQVEKEKAL
ENLQLENEKAQKEAKATLAVNEKGLARMQEKRDAMRKERDEMREELDAMR
EELDEMREERDAMREERDAIEEERDTGVSNLDELALLAIGNGAVASAAEG
GSVEEEGGKAPSEWQVKEKEREGVTEEPEPLRASNEATAAAGAAVGSPVG
ASSHKAGRKSLGQRDQEGGEDEEDKVKRLKAELVATEELSSKLSIELRQM
NDELVQMKDRLIAMAEEFHDLVPVHVFCEATAADVKIAFEKWEGYTKQAA
LVQKVNDELDSILRDPRFDPFIRRDGKLAERSRSIKSSSASRGSEASIPR
APLHSPRVVPWSTRAAYLSKVMTMTFLPRKWWTREVKDEVKHIWSVLWPI
ALTNALLMSLQIEDQIILGRIGVDELAASALGTTLFNLAWFFLAGAASAV
DTLVAQAFGARDYAACEYWTRIGYLLMTLLSLPAMIIFQYGEWVIHTVLR
QDEHLAHLAGQYTKLLLPGLWPLCMFVTMQKSMQARNVLMPSLYIMLLAN
FLNVGGNYLFIYALDMGFPGSPLATSTSRILTCLLTAIYYYFLMPEAHPQ
SVQGQTCLEGEGVRGKESDDILSGKQWPQQQHRTGVNGNGGSSKSSCSTS
SSTSSSSSSSSSKAAAEDESLRQPLLLSSSSLDSPSSSSAFSSVPNSLPP
SAPTADTAAAVAGKVLFREALWRFMRLAVPGGFMVGLEAWSFDFTTSFAA
QFGTEALDAHQSMMSISAFTYLTVPLAISIAASIRVGNLLGAQRPTQARL
AAKICLVIGVATMLLCGMVLVLLRGVLGNIFTPDAKVVKIVSQLCPIMAL
YQVFDGFQGVSAGVLRGMGRQTRVALLNLGGFWVLGLPGGALLAFYFDLG
VYGIWWGFVMGLALISLLYLRALSQLDFAAEARRALNACTDQKLEQAWEA
TVEQEKMEREGGVEAAARVGLEHYTKGGIDKV*

mRNA from alignment at chr18:411560..416880+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO18G01190.1 ID=NO18G01190.1|Name=NO18G01190.1|organism=Nannochloropsis oceanica|type=mRNA|length=5321bp|location=Sequence derived from alignment at chr18:411560..416880+ (Nannochloropsis oceanica)
ATGTCTTACCATCAAGACCGGTCGGCTTGGGTGGGAGGAGGCCATAGCGG
AGGGGCAAGCGGAGGGAACAATCACAGCGGGAGGCCGTGGTCCTCCTCTT
CTTCAGCTTCTTTCTATTTTGGTCAGAAGCGGGGCCGCAGTGACGAGATG
TTGGGGCTGGCAAGAAGCAGAAGCACAGAGAGTGACCGGAGCAGCAGTGC
CAGCCATAATCAAGGCGGTCCTCGATGTGCGGAAGGAGGGGGAGGAGGTT
GGGGACGAGGGGCAAATAGAGGAGGAGCAGACCCAACTTTGACGATTGCA
CGACTGCAACAAGACCTTGAAACTAGGGGTAAGCATACGCATAGATAGGG
GTGGATGGTGTCTAGGGAATAGGGGGTCGCCAGAGGGTTGTATTCCTATG
AACCCTTTTCGCATCCCTCCCTCCTCCATCCACTGGCCAAGATGAAGCTG
GCGAAGAACAACCTGTTTGTATGCAGATGGACAAGGAAATTGTGCTTAGG
AACCTAAGGTTTCAGAATGGAAAAGCGCTAAAGAACCTACAGGTAGAGAA
GGAGAAAGCGCTGGAGAACCTGCAGCTCGAGAATGAGAAAGCGCAAAAAG
AGGCTAAGGCGACGCTGGCTGTAAATGAAAAAGGCTTGGCGCGGATGCAG
GAGAAGCGAGATGCAATGCGGAAGGAGCGAGATGAAATGAGGGAGGAGCT
AGATGCAATGCGGGAGGAGCTAGATGAAATGCGGGAGGAGCGAGATGCAA
TGCGGGAGGAGCGGGACGCAATCGAGGAGGAGCGGGATAGTGCTCTGCTG
CGAATAGAGCCGTTGGCGAAGCATTACCGGGAAATGGGTGTGTGGATCTA
GACCGTGTGTCCGCAAGCCGGGGTGAGCAATCTGGACGAGTTGGCCCTGT
TGGCGATCGGAAATGGGGCGGTGGCGTCGGCGGCGGAAGGTGGCTCGGTC
GAAGAGGAGGGCGGGAAAGCACCTTCGGAGTGGCAGGTGAAGGAAAAGGA
GAGAGAGGGCGTGACAGAGGAGCCTGAGCCGTTGAGGGCATCAAATGAAG
CAACGGCAGCAGCAGGAGCAGCAGTCGGGAGTCCTGTGGGGGCCAGTAGT
CATAAAGCGGGTCGCAAAAGTTTAGGCCAGCGGGACCAGGAGGGGGGGGA
AGACGAGGAAGACAAGGTAAAGAGGCTGAAAGCAGAGCTGGTGGCGACGG
AGGAGCTCTCCAGCAAGCTCAGCATAGAGCTGCGTCAGATGAATGACGAG
CTCGTGCAGATGAAGGACAGATTGATTGCCATGGCGGAAGAATTTCACGA
CCTGGTGCCAGTACACGTGTTTTGCGAAGCCACAGCCGCGGACGTGAAAA
TTGCGTTCGAGAAGTGGGAGGGCTACACTAAGCAGGCGGCCTTGGTCCAG
AAGGTTAACGACGAGTTGGATTCTATTTTGCGCGACCCCCGCTTCGATCC
CTTCATCCGCCGGGATGGCAAGTTGGCGGAAAGATCAAGAAGCATAAAGT
CCTCCAGCGCATCAAGAGGGAGTATGGCGAGGGCGTGTGGACGCTCCTCA
TGTTGAAGCGATGGGAGATCGAGCAATACAACCCCAGCGGGCATTACCCT
ACCAAAGTTTTGTGGAAAGGTGACAAAAAACTGAAGCTTAACGAGGCGAT
CGATCACCTGCACGAAAAGCTCAAGGTGCTGCTAGGAGGCAATGGTGGCG
GCAGCGACTAAGCACCAGAAGTAGAGGAGGGGAAAGGAAGGAAAAGAGGT
AAATATTGGACATAGTAGTGTACAAGACTACCAGCCAATTACTAAACATT
GACGATTAGGAGAAGAGACGGAGGAATTTGGGGGGGGGGTTAGATCTAAG
AGAGGGTGTGTTCGCCATCAAACCCCCAAAAAGCAAAAAAGCAAAAAAGC
TTTTTGAGGGGTTGCGAACACAGCCTCTATTGCTCACTGCTTTTGACAAA
AACGCCCGGACGTGTAAGTAGCGACTCTTACCATCACACTACCTATCTTC
CATCCCATAAAATGAAGTCATATCCCATGTGACACGAAGATGATATAGGC
AACAAATCGAAGAATTAATTCATATGTGTATGTGTAACCTCTAGTTGCTC
TTGTTAGCCTGTGGTTTTTTGGTGCATGGGCCAGATCTGGATCAAGCGAC
AGCAAGGACGTGGTCGTGGTGGTCTTCGAAAAATGTTGCGCATGAAACCA
CAATCACCATACAATGCTTCACTCTAATGTCACACACACATGGCACTGTT
CTCATACCACTATACACAGGACAAGCAAGGCAGGGCGGTTCTCGCTTCAT
TACGCGTGTCCCCCCGCCCCCACGAGCCAGCACGCCAGCACCATCATCAT
CGTCATCCTGAGGCGAGGCAAGCATCCCACGCGCTCCACTGCACTCGCCA
CGAGTCGTCCCCTGGTCGACCCGTGCAGCTTACCTTTCGAAAGGTGAGTC
TCATGACTTTCTAATTTGAGGCAGCGACCGTGCCTTTGCGGCGTCCTGTG
TGGCGATCGGTATCACGAGCGTTTCGGCTTTGGCGTCTGATGCGAGAGTG
ACCACTTCTCAAGCTTCATGCATTTGTGGCATTACAAAAGCCTATTCTTT
GTCCTCGTAAATAGCCTTTATAAATAAGGCTTCGGTCGCCCCTAACTCAT
CCATTTTCTATTATCCGCGCCGCTCTGTTCCCTTCGATTGAACCCCCGCA
TACCCTCCAAACACCCGCATCCCACAGTCATGACAATGACTTTTCTCCCC
CGGAAATGGTGGACCCGGGAAGTCAAAGATGAAGTCAAGCACATTTGGAG
CGTCCTCTGGCCGATCGCATTAACGAATGCTTTGTTGATGTCCCTGCAGA
TTGAGGACCAAATTATTTTGGGCAGAATAGGGGTGGATGAACTTGCTGCT
TCGGCACTAGGTAAGTGAGATGAGAGGGGGGAAGTGTGGGAACGAAGGGC
AAAAGGAAGCGGAAAGGTGCATATCGGCGGGAGTCGAATAAATGACAATC
TCGCCCTTGCATGATCGAGAAGAATTATGGACAGGACGGAGGTACGCCGT
CCCGCACTTTTACGATGCTCACATTACCCCGACGTACACTTTATATCATC
GTGCAGGCACGACACTCTTCAACCTGGCTTGGTTTTTCTTGGCTGGAGCA
GCTTCAGCAGTGGACACATTGGTGGCACAAGCATTCGGTGCTCGAGACTA
TGCCGCATGCGAGTACTGGACCCGGATCGGCTACTTGCTCATGACGCTTC
TCTCACTCCCCGCCATGATCATCTTCCAGTACGGCGAGTGGGTCATCCAC
ACGGTCCTTCGCCAGGACGAGCACCTCGCTCACCTCGCCGGTCAATACAC
CAAACTCCTCCTCCCCGGCCTCTGGCCTTTATGTATGTTTGTGACGATGC
AAAAATCCATGCAGGCCCGCAATGTGCTTATGCCTTCGCTATACATCATG
CTCCTGGCCAATTTCCTGAATGTCGGAGGGAACTATTTGTTCATATACGC
GCTTGACATGGGTTTCCCTGGGTCACCTCTCGCGACCTCAACCAGCCGAA
TCCTCACCTGTTTGTTGACTGCCATATACTACTATTTCTTGATGCCTGAG
GCACACCCGCAATCGGTGCAGGGGCAGACATGTCTGGAGGGAGAAGGCGT
GAGGGGGAAGGAATCAGACGACATTTTGTCGGGGAAGCAGTGGCCACAGC
AGCAGCACAGGACTGGTGTAAATGGTAATGGTGGCAGTAGCAAAAGTAGT
TGTAGCACCAGCAGCAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
GGCCGCCGCGGAAGACGAATCGTTGCGGCAACCCTTGTTGTTGTCTTCCT
CGTCGTTAGACAGTCCTTCCTCTTCTTCCGCTTTCTCTTCCGTCCCCAAC
TCCCTCCCGCCTTCAGCGCCCACTGCAGACACTGCTGCTGCTGTTGCAGG
CAAGGTCCTCTTCAGAGAAGCCCTCTGGCGGTTTATGCGCCTGGCTGTGC
CCGGCGGATTCATGGTGGGGCTAGAGGCGTGGAGCTTTGATTTCACCACT
TCCTTTGCTGCACAATTTGGAACGGAAGCACTCGACGCCCATCAGTCCAT
GATGTCCATCTCGGCCTTCACTTATTTGACTGGTGAGTTCAGAGAAGGGC
ACCGGTGCATGGGTAGTGTGGAAAATAAAAGCAGGCGGTACCGACTTTTC
ATTCATGCCTCTTTTTCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTCCCG
TTAGTGCCCCTTGCCATCTCCATCGCCGCCTCCATCCGTGTGGGCAATCT
GTTAGGGGCTCAACGACCGACGCAAGCGCGATTGGCCGCCAAAATCTGTC
TGGTGATCGGCGTGGCGACCATGTTGCTGTGTGGGATGGTGCTTGTTTTA
CTGCGCGGGTAGGTGAAGTGGAAAAATATAAGTGACGTGAAAAGAGAAGA
AAAGAAGCGGAGGGATCAATGACTCGCAAATACACACACTCCTACAGGGT
GCTTGGCAACATCTTTACGCCCGACGCCAAGGTGGTGAAGATCGTGTCGC
AGCTGTGTCCGATCATGGCCCTCTACCAGGTCTTCGATGGCTTTCAGGTA
AGCAGCAGCCGATCAGCCTGGGAGGTAGGGAGGGCGGGAGGAAAAAGTTT
TGCTTTCTCTCCTCCTAGGCATCTCCTCAGGATTGATCAGACGTTCTGTT
GTCGTATTCTTGCTCGTTTCCGTCCCTCCATCTATCCACGGTTTTTCCGC
CTCACACCTCTACCATTGCGCGGACTCTCTGCCTCTCTTTGTCCACTCTT
TGACACCACAGGGTGTCTCCGCCGGTGTTCTTCGCGGGATGGGGCGACAG
ACGCGTGTTGCATTGCTCAACTTGGGTGGCTTTTGGGTGCTAGGGCTGCC
CGGCGGGGCGCTTTTGGCCTTCTATTTTGATTTGGGCGTGTATGGGATTT
GGTGGGGCTTCGTCATGGTAAGAGGAGTGAGGGAGTGAGGGAGGGAAGCT
GTGCCTCTATCTGCGGAGCTTCAGTTTCCTTCTCCCTTTTCCTTATTAAT
GCTCTCTCTCTCTTGACTCCTCTCACACGATGACTGGTAATACACCTTCC
AGGGTCTGGCTTTGATTTCTCTCTTGTACCTAAGGGCATTGTCCCAGCTG
GATTTTGCTGCAGAGGCCAGGAGGGCTTTAAATGCCTGTACCGATCAGAA
ACTTGAGCAGGCATGGGAGGCAACAGTAGAGCAGGAGAAGATGGAGAGGG
AGGGAGGGGTGGAAGCAGCCGCTCGGGTGGGGTTGGAACATTATACTAAA
GGTGGTATTGACAAGGTGTAA

Coding sequence (CDS) from alignment at chr18:411560..416880+

>NO18G01190.1 ID=NO18G01190.1|Name=NO18G01190.1|organism=Nannochloropsis oceanica|type=CDS|length=3249bp|location=Sequence derived from alignment at chr18:411560..416880+ (Nannochloropsis oceanica)
ATGTCTTACCATCAAGACCGGTCGGCTTGGGTGGGAGGAGGCCATAGCGG
AGGGGCAAGCGGAGGGAACAATCACAGCGGGAGGCCGTGGTCCTCCTCTT
CTTCAGCTTCTTTCTATTTTGGTCAGAAGCGGGGCCGCAGTGACGAGATG
TTGGGGCTGGCAAGAAGCAGAAGCACAGAGAGTGACCGGAGCAGCAGTGC
CAGCCATAATCAAGGCGGTCCTCGATGTGCGGAAGGAGGGGGAGGAGGTT
GGGGACGAGGGGCAAATAGAGGAGGAGCAGACCCAACTTTGACGATTGCA
CGACTGCAACAAGACCTTGAAACTAGGGATGAAGCTGGCGAAGAACAACC
TGTTTGTATGCAGATGGACAAGGAAATTGTGCTTAGGAACCTAAGGTTTC
AGAATGGAAAAGCGCTAAAGAACCTACAGGTAGAGAAGGAGAAAGCGCTG
GAGAACCTGCAGCTCGAGAATGAGAAAGCGCAAAAAGAGGCTAAGGCGAC
GCTGGCTGTAAATGAAAAAGGCTTGGCGCGGATGCAGGAGAAGCGAGATG
CAATGCGGAAGGAGCGAGATGAAATGAGGGAGGAGCTAGATGCAATGCGG
GAGGAGCTAGATGAAATGCGGGAGGAGCGAGATGCAATGCGGGAGGAGCG
GGACGCAATCGAGGAGGAGCGGGATACCGGGGTGAGCAATCTGGACGAGT
TGGCCCTGTTGGCGATCGGAAATGGGGCGGTGGCGTCGGCGGCGGAAGGT
GGCTCGGTCGAAGAGGAGGGCGGGAAAGCACCTTCGGAGTGGCAGGTGAA
GGAAAAGGAGAGAGAGGGCGTGACAGAGGAGCCTGAGCCGTTGAGGGCAT
CAAATGAAGCAACGGCAGCAGCAGGAGCAGCAGTCGGGAGTCCTGTGGGG
GCCAGTAGTCATAAAGCGGGTCGCAAAAGTTTAGGCCAGCGGGACCAGGA
GGGGGGGGAAGACGAGGAAGACAAGGTAAAGAGGCTGAAAGCAGAGCTGG
TGGCGACGGAGGAGCTCTCCAGCAAGCTCAGCATAGAGCTGCGTCAGATG
AATGACGAGCTCGTGCAGATGAAGGACAGATTGATTGCCATGGCGGAAGA
ATTTCACGACCTGGTGCCAGTACACGTGTTTTGCGAAGCCACAGCCGCGG
ACGTGAAAATTGCGTTCGAGAAGTGGGAGGGCTACACTAAGCAGGCGGCC
TTGGTCCAGAAGGTTAACGACGAGTTGGATTCTATTTTGCGCGACCCCCG
CTTCGATCCCTTCATCCGCCGGGATGGCAAGTTGGCGGAAAGATCAAGAA
GCATAAAGTCCTCCAGCGCATCAAGAGGGAGCGAGGCAAGCATCCCACGC
GCTCCACTGCACTCGCCACGAGTCGTCCCCTGGTCGACCCGTGCAGCTTA
CCTTTCGAAAGTCATGACAATGACTTTTCTCCCCCGGAAATGGTGGACCC
GGGAAGTCAAAGATGAAGTCAAGCACATTTGGAGCGTCCTCTGGCCGATC
GCATTAACGAATGCTTTGTTGATGTCCCTGCAGATTGAGGACCAAATTAT
TTTGGGCAGAATAGGGGTGGATGAACTTGCTGCTTCGGCACTAGGCACGA
CACTCTTCAACCTGGCTTGGTTTTTCTTGGCTGGAGCAGCTTCAGCAGTG
GACACATTGGTGGCACAAGCATTCGGTGCTCGAGACTATGCCGCATGCGA
GTACTGGACCCGGATCGGCTACTTGCTCATGACGCTTCTCTCACTCCCCG
CCATGATCATCTTCCAGTACGGCGAGTGGGTCATCCACACGGTCCTTCGC
CAGGACGAGCACCTCGCTCACCTCGCCGGTCAATACACCAAACTCCTCCT
CCCCGGCCTCTGGCCTTTATGTATGTTTGTGACGATGCAAAAATCCATGC
AGGCCCGCAATGTGCTTATGCCTTCGCTATACATCATGCTCCTGGCCAAT
TTCCTGAATGTCGGAGGGAACTATTTGTTCATATACGCGCTTGACATGGG
TTTCCCTGGGTCACCTCTCGCGACCTCAACCAGCCGAATCCTCACCTGTT
TGTTGACTGCCATATACTACTATTTCTTGATGCCTGAGGCACACCCGCAA
TCGGTGCAGGGGCAGACATGTCTGGAGGGAGAAGGCGTGAGGGGGAAGGA
ATCAGACGACATTTTGTCGGGGAAGCAGTGGCCACAGCAGCAGCACAGGA
CTGGTGTAAATGGTAATGGTGGCAGTAGCAAAAGTAGTTGTAGCACCAGC
AGCAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGCCGCCGCGGA
AGACGAATCGTTGCGGCAACCCTTGTTGTTGTCTTCCTCGTCGTTAGACA
GTCCTTCCTCTTCTTCCGCTTTCTCTTCCGTCCCCAACTCCCTCCCGCCT
TCAGCGCCCACTGCAGACACTGCTGCTGCTGTTGCAGGCAAGGTCCTCTT
CAGAGAAGCCCTCTGGCGGTTTATGCGCCTGGCTGTGCCCGGCGGATTCA
TGGTGGGGCTAGAGGCGTGGAGCTTTGATTTCACCACTTCCTTTGCTGCA
CAATTTGGAACGGAAGCACTCGACGCCCATCAGTCCATGATGTCCATCTC
GGCCTTCACTTATTTGACTGTGCCCCTTGCCATCTCCATCGCCGCCTCCA
TCCGTGTGGGCAATCTGTTAGGGGCTCAACGACCGACGCAAGCGCGATTG
GCCGCCAAAATCTGTCTGGTGATCGGCGTGGCGACCATGTTGCTGTGTGG
GATGGTGCTTGTTTTACTGCGCGGGGTGCTTGGCAACATCTTTACGCCCG
ACGCCAAGGTGGTGAAGATCGTGTCGCAGCTGTGTCCGATCATGGCCCTC
TACCAGGTCTTCGATGGCTTTCAGGGTGTCTCCGCCGGTGTTCTTCGCGG
GATGGGGCGACAGACGCGTGTTGCATTGCTCAACTTGGGTGGCTTTTGGG
TGCTAGGGCTGCCCGGCGGGGCGCTTTTGGCCTTCTATTTTGATTTGGGC
GTGTATGGGATTTGGTGGGGCTTCGTCATGGGTCTGGCTTTGATTTCTCT
CTTGTACCTAAGGGCATTGTCCCAGCTGGATTTTGCTGCAGAGGCCAGGA
GGGCTTTAAATGCCTGTACCGATCAGAAACTTGAGCAGGCATGGGAGGCA
ACAGTAGAGCAGGAGAAGATGGAGAGGGAGGGAGGGGTGGAAGCAGCCGC
TCGGGTGGGGTTGGAACATTATACTAAAGGTGGTATTGACAAGGTGTAA

Synonyms

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