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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr18 | genome | chr18:385968..388262 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO18G01100.1 vs.
Match: EWM23334.1 (group xv phospholipase a2 [Nannochloropsis gaditana]) HSP 1 Score: 830.9 bits (2145), Expect = 2.800e-237 Identity = 379/482 (78.63%), Postives = 434/482 (90.04%), Query Frame = 0
Query: 165 EDSDRGADSKSKTALDHGPTPAETDPLYLSRAKSIREAIGRDPVIVLNGLGGAGLQFRLRGAKPSYSYCRTWYLRFHTAWILPRVVIPPIARCLMDFITPIYDSMTQTFSNKPGVAVKVTGFGQILSLENLGPSILPLRNFDYIRGFVKFMISELGYGPGLDLFAAPYDWRYTPDVLKEQGYFRDLQALVETAYITSGNRRVHLMGHSLGGVVALAFLNDVPLEWKQIYIKSYLPVGSPFGGTVVNVMGSCSGYNLGLPLAPADLRDFEAQAPTGPWLFPRPSLWPPDEILVQTPNQSYSAHDYERLLRDLGLGKAALPVYKHVAPLYLETLIPPGIDVHVIHSTGNPTIASLIYNQSFNGSMDQIPLPPFHVFGPGDGTVPERSLLRPFNEWHPPGKEGGKEGGWVLTHHVIEGVNHMDICNFRGFFRVLTDILGNHVDRTLRPESDALETSPDAWKTRMKQRWAPIEAALDAAEEMVFGP 647
E + A SK KTAL+HGP P ETDPLYLSRA+++RE+ GRDPV+VLNGLGGAGL+FRLRGAKP+ SYCR+WY R+HTAWILPRV+IPP+ARCLM+F+TP+YD+ TF +KPGV VKV GFGQI+SLENLGPS+LPLRNFDYI GF+ FM++ELGYGPGLDLFAAPYDWRY+PDVLKEQGYFRDL+ALVETAY+T+G RRVHLMGHSLGGVVALAFLN++PLEWK+ YIKSYLPVGSPF GTVVNVMG+CSGYNLGLPLAP+DLRDFEAQAP+GPWLFP+PSLWPPDEILV+TPNQSY+AHDYERLL DLGLG+A+LPVY+HVAPLYLETL+PPGIDVHVIHS GNPTIASL+YNQSFNGSM +IP PP ++GPGDGTVPERSL+RPF EW P + W +THHV+EGVNHMDICNFRGFFRVLTDILGNHVDRT PE++ALET+PD WKTR+K WAP +AA + A+EMVFGP
Sbjct: 112 EATGNDAPSKPKTALNHGPAPPETDPLYLSRAQAVRESPGRDPVVVLNGLGGAGLKFRLRGAKPTRSYCRSWYARWHTAWILPRVLIPPVARCLMEFLTPVYDAEAGTFDSKPGVEVKVDGFGQIISLENLGPSMLPLRNFDYIHGFINFMMTELGYGPGLDLFAAPYDWRYSPDVLKEQGYFRDLRALVETAYVTAGKRRVHLMGHSLGGVVALAFLNEMPLEWKRRYIKSYLPVGSPFAGTVVNVMGACSGYNLGLPLAPSDLRDFEAQAPSGPWLFPQPSLWPPDEILVRTPNQSYTAHDYERLLTDLGLGEASLPVYRHVAPLYLETLVPPGIDVHVIHSQGNPTIASLVYNQSFNGSMAEIPSPPVLIYGPGDGTVPERSLMRPFFEWSP-------DESWRMTHHVLEGVNHMDICNFRGFFRVLTDILGNHVDRTPAPEAEALETAPDPWKTRLKSAWAPFQAAANYADEMVFGP 586
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO18G01100.1 ID=NO18G01100.1|Name=NO18G01100.1|organism=Nannochloropsis oceanica|type=mRNA|length=2180bp
ACAAAGGAAGAGGCGGTGTTCTCGCTGTCGCTGCCTGGCTTGGCTCTTGG
CCGGCATCGAACATGACGTGGGTTCCCAGTGGCAAGCCTCTTCTTCCACC
ACCTGGCCCCCCGCCGGCCGAGGCACATCACGCGCCTCCCAGAAGAAGAT
GGGGAGCTGGATTCTTCTTAGCGATGACGCTATCGTGCTCTCTATGGCCT
TTGGGAGTGCTGGGGCAACTCGGAGGCAGCAGTGACGACTCGCACGGCCC
ACAGCTCCTTCAAGAGGACTTGGACATGGCCTCCTTCCTCGGTATTGACC
TCGGCAGTGGTGAGAATGCCGACGCATTTGCCTCCTTCCTAGATCTGGGC
AGCAGCAGCAGCAGCAGCAGCAGCACCAATTACGACACGAGCGCCGAAAC
TGTAGATTCCTTTCCCGGCAAGAGCAGTTCTACAAGCGGCGACGACGGGA
TCGAGAACCAAGCCTCCTTGCTTGGCCTAGCCGGCCTGGACAGCAGCAGC
ACTGATATTGACTCTGAGTCCCCAGAAAAACTCTCCTTCTTTGGCCATGG
CAATGAGGACAGCGATAGAGGGGCCGATTCCAAGTCCAAGACCGCACTAG
ATCACGGCCCCACCCCAGCGGAGACAGATCCCCTCTATTTATCCCGGGCT
AAAAGCATCCGCGAGGCCATTGGCCGGGATCCTGTGATCGTTTTGAATGG
GCTAGGTGGCGCAGGATTACAATTTAGGTTGCGGGGGGCGAAACCTTCGT
ATTCTTACTGTCGCACCTGGTATTTACGCTTCCATACCGCGTGGATCTTG
CCGAGGGTTGTGATTCCTCCGATAGCGAGATGCTTGATGGATTTCATCAC
GCCTATCTACGACTCGATGACACAAACATTTAGTAATAAGCCAGGAGTAG
CGGTGAAGGTGACTGGCTTTGGGCAGATTCTTTCGTTGGAAAACTTAGGG
CCGTCGATTTTGCCGCTTCGGAATTTTGATTACATCAGAGGCTTTGTTAA
GTTTATGATTAGTGAACTAGGGTACGGGCCTGGCCTTGACCTATTTGCAG
CGCCTTATGACTGGAGGTACACGCCTGATGTGCTCAAGGAACAGGGATAC
TTCCGGGACCTGCAAGCCCTCGTTGAAACCGCATATATCACTTCAGGTAA
TCGTCGCGTGCACCTAATGGGACATTCGTTGGGGGGGGTCGTCGCCCTGG
CCTTCCTGAATGACGTGCCGTTAGAATGGAAGCAGATCTACATCAAATCC
TACCTCCCCGTCGGCAGTCCCTTCGGTGGCACGGTTGTCAATGTCATGGG
ATCATGCTCCGGGTATAATCTCGGCCTCCCCCTCGCTCCTGCCGACCTGC
GAGATTTCGAGGCCCAAGCACCGACGGGCCCCTGGCTCTTCCCCCGGCCC
TCACTGTGGCCCCCAGATGAGATTCTCGTACAGACACCCAATCAAAGCTA
TTCTGCACATGATTACGAACGCCTGCTGCGTGATTTAGGCCTGGGTAAAG
CTGCTCTCCCGGTGTACAAGCATGTTGCTCCGCTCTATCTCGAGACGCTT
ATCCCCCCCGGCATCGACGTCCACGTCATCCACTCGACTGGCAACCCCAC
CATCGCCTCCCTCATCTACAACCAGTCCTTCAATGGAAGCATGGACCAAA
TTCCTCTCCCTCCCTTCCACGTCTTTGGCCCTGGTGATGGCACGGTCCCC
GAAAGGAGCTTGCTGAGGCCGTTCAATGAGTGGCATCCCCCCGGGAAGGA
GGGAGGGAAGGAGGGAGGGTGGGTGTTGACGCACCATGTGATAGAAGGGG
TGAACCACATGGATATTTGCAATTTTCGAGGCTTTTTCAGGGTCTTGACC
GATATATTGGGGAACCATGTGGACAGAACCTTGCGGCCGGAATCGGACGC
GCTGGAAACGTCACCCGACGCCTGGAAGACGAGAATGAAGCAGCGCTGGG
CGCCGATCGAGGCGGCCTTGGATGCCGCAGAGGAGATGGTCTTTGGTCCT
TAGGCTTCAGGATCAGGGACGAGAAGGAGACAAGGGGAGTGGGGTGCATG
TGAGGATTGGGCTTGTGCTTGCACTGCTGGCCTTGTCTATCTTGTATTTT
AGCGAGGGAGACAGACTGCTCCATGTAGATGTAGGGCTTGGTCGATAAAA
TAAATGAATGCTAAATGTAAAGGTCCGAGC back to topprotein sequence of NO18G01100.1 >NO18G01100.1-protein ID=NO18G01100.1-protein|Name=NO18G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bp
MTWVPSGKPLLPPPGPPPAEAHHAPPRRRWGAGFFLAMTLSCSLWPLGVL
GQLGGSSDDSHGPQLLQEDLDMASFLGIDLGSGENADAFASFLDLGSSSS
SSSSTNYDTSAETVDSFPGKSSSTSGDDGIENQASLLGLAGLDSSSTDID
SESPEKLSFFGHGNEDSDRGADSKSKTALDHGPTPAETDPLYLSRAKSIR
EAIGRDPVIVLNGLGGAGLQFRLRGAKPSYSYCRTWYLRFHTAWILPRVV
IPPIARCLMDFITPIYDSMTQTFSNKPGVAVKVTGFGQILSLENLGPSIL
PLRNFDYIRGFVKFMISELGYGPGLDLFAAPYDWRYTPDVLKEQGYFRDL
QALVETAYITSGNRRVHLMGHSLGGVVALAFLNDVPLEWKQIYIKSYLPV
GSPFGGTVVNVMGSCSGYNLGLPLAPADLRDFEAQAPTGPWLFPRPSLWP
PDEILVQTPNQSYSAHDYERLLRDLGLGKAALPVYKHVAPLYLETLIPPG
IDVHVIHSTGNPTIASLIYNQSFNGSMDQIPLPPFHVFGPGDGTVPERSL
LRPFNEWHPPGKEGGKEGGWVLTHHVIEGVNHMDICNFRGFFRVLTDILG
NHVDRTLRPESDALETSPDAWKTRMKQRWAPIEAALDAAEEMVFGP* back to topmRNA from alignment at chr18:385968..388262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO18G01100.1 ID=NO18G01100.1|Name=NO18G01100.1|organism=Nannochloropsis oceanica|type=mRNA|length=2295bp|location=Sequence derived from alignment at chr18:385968..388262- (Nannochloropsis oceanica)
ACAAAGGAAGAGGCGGTGTTCTCGCTGTCGCTGCCTGGCTTGGCTCTTGG
CCGGCATCGAACATGACGTGGGTTCCCAGTGGCAAGCCTCTTCTTCCACC
ACCTGGCCCCCCGCCGGCCGAGGCACATCACGCGCCTCCCAGAAGAAGAT
GGGGAGCTGGATTCTTCTTAGCGATGACGCTATCGTGCTCTCTATGGCCT
TTGGGAGTGCTGGGGCAACTCGGAGGCAGCAGTGACGACTCGCACGGCCC
ACAGCTCCTTCAAGAGGACTTGGACATGGCCTCCTTCCTCGGTATTGACC
TCGGCAGTGGTGAGAATGCCGACGCATTTGCCTCCTTCCTAGATCTGGGC
AGCAGCAGCAGCAGCAGCAGCAGCACCAATTACGACACGAGCGCCGAAAC
TGTAGATTCCTTTCCCGGCAAGAGCAGTTCTACAAGCGGCGACGACGGGA
TCGAGAACCAAGCCTCCTTGCTTGGCCTAGCCGGCCTGGACAGCAGCAGC
ACTGATATTGACTCTGAGTCCCCAGAAAAACTCTCCTTCTTTGGCCATGG
CAATGAGGACAGCGATAGAGGGGCCGATTCCAAGTCCAAGACCGCACTAG
ATCACGGCCCCACCCCAGCGGAGACAGATCCCCTCTATTTATCCCGGGCT
AAAAGCATCCGCGAGGCCATTGGCCGGGATCCTGTGATCGTTTTGAATGG
GCTAGGTGGCGCAGGATTACAATTTAGGTTGCGGGGGGCGAAACCTTCGT
ATTCTTACTGTCGCACCTGGTATTTACGCTTCCATACCGCGTGGATCTTG
CCGAGGGTTGTGATTCCTCCGATAGCGAGATGCTTGATGGATTTCATCAC
GCCTATCTACGACTCGATGACACAAACATTTAGTAATAAGCCAGGAGTAG
CGGTGAAGGTGACTGGCTTTGGGCAGATTCTTTCGTTGGAAAACTTAGGG
CCGTCGATTTTGCCGCTTCGGAATTTTGATTACATCAGAGGCTTTGTTAA
GTTTATGATTAGTGAACTAGGGTACGGGCCTGGCCTTGACCTATTTGCAG
CGCCTTATGACTGGAGGTACACGCCTGATGTGCTCAAGGAACAGGTGAAT
CCCTCTTCCCTTGTTAACTTCTTCCTCCACCTTCTGAAGCTCCTGAAGTT
CTCACCTCCCTCCTCTCTCCTCTCTCCCTTCTCTCCCTTCCTCTCCCTTT
CATCCCTAGGGATACTTCCGGGACCTGCAAGCCCTCGTTGAAACCGCATA
TATCACTTCAGGTAATCGTCGCGTGCACCTAATGGGACATTCGTTGGGGG
GGGTCGTCGCCCTGGCCTTCCTGAATGACGTGCCGTTAGAATGGAAGCAG
ATCTACATCAAATCCTACCTCCCCGTCGGCAGTCCCTTCGGTGGCACGGT
TGTCAATGTCATGGGATCATGCTCCGGGTATAATCTCGGCCTCCCCCTCG
CTCCTGCCGACCTGCGAGATTTCGAGGCCCAAGCACCGACGGGCCCCTGG
CTCTTCCCCCGGCCCTCACTGTGGCCCCCAGATGAGATTCTCGTACAGAC
ACCCAATCAAAGCTATTCTGCACATGATTACGAACGCCTGCTGCGTGATT
TAGGCCTGGGTAAAGCTGCTCTCCCGGTGTACAAGCATGTTGCTCCGCTC
TATCTCGAGACGCTTATCCCCCCCGGCATCGACGTCCACGTCATCCACTC
GACTGGCAACCCCACCATCGCCTCCCTCATCTACAACCAGTCCTTCAATG
GAAGCATGGACCAAATTCCTCTCCCTCCCTTCCACGTCTTTGGCCCTGGT
GATGGCACGGTCCCCGAAAGGAGCTTGCTGAGGCCGTTCAATGAGTGGCA
TCCCCCCGGGAAGGAGGGAGGGAAGGAGGGAGGGTGGGTGTTGACGCACC
ATGTGATAGAAGGGGTGAACCACATGGATATTTGCAATTTTCGAGGCTTT
TTCAGGGTCTTGACCGATATATTGGGGAACCATGTGGACAGAACCTTGCG
GCCGGAATCGGACGCGCTGGAAACGTCACCCGACGCCTGGAAGACGAGAA
TGAAGCAGCGCTGGGCGCCGATCGAGGCGGCCTTGGATGCCGCAGAGGAG
ATGGTCTTTGGTCCTTAGGCTTCAGGATCAGGGACGAGAAGGAGACAAGG
GGAGTGGGGTGCATGTGAGGATTGGGCTTGTGCTTGCACTGCTGGCCTTG
TCTATCTTGTATTTTAGCGAGGGAGACAGACTGCTCCATGTAGATGTAGG
GCTTGGTCGATAAAATAAATGAATGCTAAATGTAAAGGTCCGAGC back to topCoding sequence (CDS) from alignment at chr18:385968..388262- >NO18G01100.1 ID=NO18G01100.1|Name=NO18G01100.1|organism=Nannochloropsis oceanica|type=CDS|length=1941bp|location=Sequence derived from alignment at chr18:385968..388262- (Nannochloropsis oceanica)
ATGACGTGGGTTCCCAGTGGCAAGCCTCTTCTTCCACCACCTGGCCCCCC
GCCGGCCGAGGCACATCACGCGCCTCCCAGAAGAAGATGGGGAGCTGGAT
TCTTCTTAGCGATGACGCTATCGTGCTCTCTATGGCCTTTGGGAGTGCTG
GGGCAACTCGGAGGCAGCAGTGACGACTCGCACGGCCCACAGCTCCTTCA
AGAGGACTTGGACATGGCCTCCTTCCTCGGTATTGACCTCGGCAGTGGTG
AGAATGCCGACGCATTTGCCTCCTTCCTAGATCTGGGCAGCAGCAGCAGC
AGCAGCAGCAGCACCAATTACGACACGAGCGCCGAAACTGTAGATTCCTT
TCCCGGCAAGAGCAGTTCTACAAGCGGCGACGACGGGATCGAGAACCAAG
CCTCCTTGCTTGGCCTAGCCGGCCTGGACAGCAGCAGCACTGATATTGAC
TCTGAGTCCCCAGAAAAACTCTCCTTCTTTGGCCATGGCAATGAGGACAG
CGATAGAGGGGCCGATTCCAAGTCCAAGACCGCACTAGATCACGGCCCCA
CCCCAGCGGAGACAGATCCCCTCTATTTATCCCGGGCTAAAAGCATCCGC
GAGGCCATTGGCCGGGATCCTGTGATCGTTTTGAATGGGCTAGGTGGCGC
AGGATTACAATTTAGGTTGCGGGGGGCGAAACCTTCGTATTCTTACTGTC
GCACCTGGTATTTACGCTTCCATACCGCGTGGATCTTGCCGAGGGTTGTG
ATTCCTCCGATAGCGAGATGCTTGATGGATTTCATCACGCCTATCTACGA
CTCGATGACACAAACATTTAGTAATAAGCCAGGAGTAGCGGTGAAGGTGA
CTGGCTTTGGGCAGATTCTTTCGTTGGAAAACTTAGGGCCGTCGATTTTG
CCGCTTCGGAATTTTGATTACATCAGAGGCTTTGTTAAGTTTATGATTAG
TGAACTAGGGTACGGGCCTGGCCTTGACCTATTTGCAGCGCCTTATGACT
GGAGGTACACGCCTGATGTGCTCAAGGAACAGGGATACTTCCGGGACCTG
CAAGCCCTCGTTGAAACCGCATATATCACTTCAGGTAATCGTCGCGTGCA
CCTAATGGGACATTCGTTGGGGGGGGTCGTCGCCCTGGCCTTCCTGAATG
ACGTGCCGTTAGAATGGAAGCAGATCTACATCAAATCCTACCTCCCCGTC
GGCAGTCCCTTCGGTGGCACGGTTGTCAATGTCATGGGATCATGCTCCGG
GTATAATCTCGGCCTCCCCCTCGCTCCTGCCGACCTGCGAGATTTCGAGG
CCCAAGCACCGACGGGCCCCTGGCTCTTCCCCCGGCCCTCACTGTGGCCC
CCAGATGAGATTCTCGTACAGACACCCAATCAAAGCTATTCTGCACATGA
TTACGAACGCCTGCTGCGTGATTTAGGCCTGGGTAAAGCTGCTCTCCCGG
TGTACAAGCATGTTGCTCCGCTCTATCTCGAGACGCTTATCCCCCCCGGC
ATCGACGTCCACGTCATCCACTCGACTGGCAACCCCACCATCGCCTCCCT
CATCTACAACCAGTCCTTCAATGGAAGCATGGACCAAATTCCTCTCCCTC
CCTTCCACGTCTTTGGCCCTGGTGATGGCACGGTCCCCGAAAGGAGCTTG
CTGAGGCCGTTCAATGAGTGGCATCCCCCCGGGAAGGAGGGAGGGAAGGA
GGGAGGGTGGGTGTTGACGCACCATGTGATAGAAGGGGTGAACCACATGG
ATATTTGCAATTTTCGAGGCTTTTTCAGGGTCTTGACCGATATATTGGGG
AACCATGTGGACAGAACCTTGCGGCCGGAATCGGACGCGCTGGAAACGTC
ACCCGACGCCTGGAAGACGAGAATGAAGCAGCGCTGGGCGCCGATCGAGG
CGGCCTTGGATGCCGCAGAGGAGATGGTCTTTGGTCCTTAG back to top
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