NO18G01070.1, NO18G01070.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO18G01070.1
Unique Name	NO18G01070.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3975
Alignment location	chr18:377945..381919 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr18	genome	chr18:377945..381919 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO18G01070.1 vs.
Match: EWM23337.1 (twy3 methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 653.7 bits (1685), Expect = 1.200e-183
Identity = 359/642 (55.92%), Postives = 435/642 (67.76%), Query Frame = 0

Query:  606 GGDGRYGHAATMVGERLLITGGMSTEYMYNEEEEEEDEGGEGKRSQIQIQAPMSVLMLEPLAAAHKSVRLKLTQVAARFPIAMLVPPLIHHTAVAFHAGNDILDAKETGAGAGAGAGAGAGAGAGAGAAVLIIGGGVQSFAFSPFFAPPLVILPPSWSTFKSKKKERNAAIRETTAAGTAPMAFKKVALPSPPPCPCLLTDASHTKLLKTALERAGLFDRQRRIAQSTSIPGCMAIPILHLEDESDTNTTKPLLAELQAWCTSTSASAPASLPHSRALRLFVETLKGQPPFELIKGWGEECLPYGAATLNNQLLRLQTAVQTALEQASLPPSLLTPQLLAALHVERLGDVLLLEDNHPFRDSQAWGKAYPFLWPALLTVFPGATRLARMAPIQGGTKRRSQVQLLYPPLPPSPEAAEAAAASAVPGPGCPGWVMVRENGLKYGFDMTKSMFSSGNVSEKARIARMDCRGETVVDLYAGIGYYTLPLAVHGKAERVLACEWNTDAIAALRFNLRKNGVEGVVEVIEGDNRVTTLGLPDMIAHRVHLGLIPSSEEGWPIAVRLLREEGGMLHVHGNMLEEAVEAWVERVKREVAEIGNGLGRTWAGKGVKCVHVERVKSYAPSVWHFVADVQCGDGGGKRTGGR 1248
            G  GRY H+AT +G  L+ITGG+  +                       +A   V ++  +   H+    K+ ++A+ FP  +  PPL+HH                             G    +  A+L+IGGGVQ+FAFSP FAPPL++LPPSW  F +   +   A     A  TA  A K+  LP PPPC CLLT+ +  KLLKTALER GLFD++RRI +STS+PG +AIPIL     +DTN +  L  EL+A C+ T  +AP S   S+ +RLF+E L+G+ P E+++GW EE  PYGA  LN+Q L LQ A++ ALE + L PSL+T +LL +LHVERLGDVLLLE +HPF+++  W  AYP LWPALL+VFPGATR+ARMAPIQ GTKRRSQV LLYPP  P+PE  +       PGPG PGWV VRENGL+Y  D+TK+MFSSGNVSEKARIARMDC G+TVVDLYAGIGYYTLPLAVHG+A RV+ACEWN DA+ ALR NLR NGVEGVVEV+EGDNR++T  LPD +AHRVHLGLIPSSEEGWPIA RLLR EGGMLHVHGNMLE    AWV RV+      G  LGR WA + V+CVH+ERVKSYAPSVWHFVADVQC  GG   T G+
Sbjct:  497 GEPGRYAHSATALGTSLVITGGVLAD-----------------------EARCGVALVLEMGKDHRFA--KVIRIASPFP-RLQAPPLVHHATAPV---------------------VRRGTQCDSQGALLVIGGGVQTFAFSPVFAPPLMLLPPSWPAFAAGLVKTGGAEPAPVAENTASKASKRTPLPQPPPCLCLLTNTASAKLLKTALERGGLFDKRRRIGRSTSVPGRVAIPIL----SNDTNAS--LFEELKALCSPTPIAAPTSECISQPVRLFLEALRGRRPSEVVQGWCEEDAPYGALALNSQRLCLQAALRDALEVSGLSPSLVTERLLTSLHVERLGDVLLLERDHPFQEASLWAPAYPALWPALLSVFPGATRVARMAPIQPGTKRRSQVALLYPP--PTPEDEDLP-----PGPGGPGWVTVRENGLRYSLDITKNMFSSGNVSEKARIARMDCSGQTVVDLYAGIGYYTLPLAVHGRASRVIACEWNLDALYALRHNLRSNGVEGVVEVLEGDNRLSTRSLPDRVAHRVHLGLIPSSEEGWPIAARLLRAEGGMLHVHGNMLESVAAAWVARVEDFFRGRGRELGRPWADR-VECVHLERVKSYAPSVWHFVADVQC--GGSVLTNGQ 1075

The following BLAST results are available for this feature:

BLAST of NO18G01070.1 vs.

BLAST of NO18G01070.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM23337.1	1.200e-183	55.92	twy3 methyltransferase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO18G01070	NO18G01070	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO18G01070.1	NO18G01070.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO18G01070.1.cds1	NO18G01070.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr18:377945..381919+
coding sequence from alignment at chr18:377945..381919+

mRNA sequence

>NO18G01070.1 ID=NO18G01070.1|Name=NO18G01070.1|organism=Nannochloropsis oceanica|type=mRNA|length=3975bp
CAGGTAAATGAAATCTTGCACCTAGCCCCATGGAGTCCGCCAGGCGCACT
CGAGACTTCGACAAGAACAAAGCCCAGCGTTTACACGACTTGCTGGGTGA
CAAGGCAGGCGGCGGGAAAGACCGGTCCAAGAAGGGCAGCCTCGACGCCC
CTATTGTGGAGTTGGTGGGCCTCATCAATGGCCATCGTAACTACGTAACG
ACCAGCTCGTGCTCCGGTCGAATTGCTCTCTTTCAGGATGTGGATGGCGT
GGTCTGTCGCAAGGCCAGCGGGAACTGGTTGTTGTCAAGCCATGCTCCCG
TCACACTCCAAGCAGTACGAGGGGCACTGGCTGGATGCGATGCACGGGGC
CAGGCTAGTGGTTCGGTAACGCTGAAGCAAGAGCCTTTGGTACTGCATAT
CGAATGTCGGGACTTGGTATCGGCAGAAAGTCTACTAAAGTTAGGGGTGG
CAAGCGGATTTCGCGAGTCCGGTATCAGCCTGGGCAAGAAGCGTGTGCTG
GTAGCGATTCGGACGGGGGCCAACTCATTGGAGGCACCTCTACTGCTCCA
GGGTATCGATATGATGACGGAAGATGGGCTGGACGCTTTGGTGGCGCTTG
CCAATCGCAAGTTTGGGCTCAATGCTAAACGCACGCAACGCTTTACTGAG
ACACTGGCAGTGGCCTTTGCGGAAGAGGATAAGATGGAGTCACAGGAGCA
AGGCTTGGCGACGACCACAATGAAGGGCAACTGTCCCGAGAGTAGGAGTA
GCAGCAGTATTCAAGCAGCTAAACATGCCCTGGCAGAGGAAAGGCGAAAG
CGTAGGGATGGCGTAAAAAAGATCAAGAAGCACAAGAAAGAATGGCGGTG
GGTCGAGCCCGAAATTGCCTCCTCTCCCTCCCCAACAACCGTGAAAGCAG
CAGACAAACAGCTTTTGCGACGGTGGGGACACTCACTGTGTGAAGTGGAG
ACAGGGGTGTACTGGATGTTTGGGGGTTGGTGCGAGAAACCGGCGGGGCG
ACAAAACGATCTCATTGAGATAAAGGTGCAGGTGGAGGCACCTAGCTTGA
CTTTATCCCTACAAGCCCTCAACAACCCCTCCTCCCTCCCTAAACTCCAT
GAAAGCGCCACAACGACTGCTATGAATACCCCCGCAGCACGGGAGAAACA
CGCGGCCGTCGCCTTCCCCTCCTCCCACCCCTCTCATTGCAAGGGCACCC
TCGTTGTCTTCGGCGGTCGGGCCTCCCCCCACCGGGCGTTCGGGGATCTA
TGGTTGTATCGACGAGAGGAGGGATGGAAGGAGGTCATTCCATTGGGAAC
GGTACCTAGCCCAAGGTGGAGCCATAGCATGACATTGTTGAGGCATCGGA
GTTGTATTGTTGTGTATGGAGGGAGGGATGGTCATAATGTTTTTGGGGGG
AAGTTGCATATTCTCTCCCCTTTTGAGGATGGAATGTGGGCGTGGGGTGA
AATGGTGTTGTCGAGGGCAGAGCCGGCAAGGCCTTTGCCCCCGCTTTTTG
CGCATACGGCCACAGTTGTGGGAGGAGAAAGGGTGGGGGAGGAGGAGCGA
CGACTGTTTCTGTGGGGGGGGTTGGAGGATTTGAGTGGGGAGGGGGTTAA
GGGGGAGGGGTTTTCGATTGATCTAGCGGCACAGACTTACTGTTCTATTT
CATGCACCAAAGAGGGGGGAGGAAAAGGAAAAAGTGAAGGAGCAGGGGGA
GAAGAAGGAGAAGGAGGAGGAAAAAGAGGAGAAAAATGTGAAGGAGAAGA
AGAGGGGGAAAAGGAAGAAGCAAGAGGAGGAAGAGGAGGAGGAGAAGAAG
AAAATGATGATGAAGAAGGAGTAGGAGGAGGAGCAGGAGGAGGAGGAGGA
GATGGACGCTATGGTCATGCTGCTACGATGGTGGGGGAGAGATTGCTAAT
CACGGGAGGAATGAGTACAGAATACATGTATAATGAGGAAGAGGAAGAGG
AAGATGAAGGTGGTGAAGGAAAGAGATCACAGATACAAATACAGGCGCCG
ATGAGTGTGTTGATGCTGGAGCCATTGGCGGCCGCACACAAAAGCGTGAG
GTTGAAGCTGACACAGGTCGCTGCCCGTTTCCCTATAGCGATGTTGGTCC
CACCTTTGATCCATCACACGGCCGTAGCTTTTCACGCAGGAAATGATATC
CTCGATGCCAAGGAGACAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGG
AGCAGGAGCAGGAGCAGGAGCAGGAGCGGCAGTATTAATAATTGGTGGGG
GTGTGCAGTCCTTTGCGTTTAGCCCTTTCTTCGCGCCGCCCTTGGTAATT
CTCCCTCCTTCCTGGTCAACTTTCAAATCCAAAAAAAAGGAGAGAAACGC
AGCAATACGGGAGACTACCGCAGCAGGAACAGCACCAATGGCGTTTAAAA
AGGTAGCCCTCCCTTCTCCTCCTCCTTGTCCTTGCCTTCTAACCGATGCC
TCTCATACGAAGCTCCTCAAAACGGCCTTGGAACGTGCAGGTCTCTTTGA
TCGACAACGACGCATCGCTCAATCCACCTCCATTCCTGGCTGTATGGCCA
TACCCATCCTACATCTCGAGGACGAAAGTGACACAAATACAACCAAGCCC
CTCCTAGCCGAGCTCCAGGCGTGGTGCACCTCAACATCCGCCTCCGCACC
TGCATCCCTACCCCACTCGCGTGCTCTGCGTCTCTTTGTTGAAACCCTGA
AAGGACAGCCACCATTCGAACTAATTAAAGGTTGGGGCGAAGAATGCCTG
CCCTACGGTGCCGCAACACTCAACAATCAACTCCTTCGCCTCCAGACAGC
CGTCCAAACTGCCCTCGAGCAAGCCTCCCTCCCTCCCTCCCTCCTCACCC
CCCAACTGCTCGCCGCTTTGCACGTCGAGCGTCTCGGGGACGTGTTACTC
TTGGAAGATAATCACCCATTTCGCGATTCCCAAGCGTGGGGGAAAGCCTA
CCCCTTTCTCTGGCCCGCCTTGCTGACCGTCTTTCCCGGGGCCACCCGGC
TGGCGCGCATGGCACCCATCCAAGGAGGTACTAAGCGTCGGTCCCAGGTG
CAGCTTCTTTACCCTCCCCTCCCACCATCACCAGAAGCAGCAGAAGCAGC
AGCCGCGTCTGCTGTTCCGGGGCCAGGGTGCCCGGGTTGGGTGATGGTGC
GTGAGAATGGGCTGAAGTACGGCTTCGACATGACCAAGTCGATGTTTTCC
TCAGGCAACGTGTCAGAGAAAGCACGGATAGCGCGGATGGATTGTCGGGG
GGAGACAGTTGTGGATCTGTACGCTGGAATTGGGTATTACACTTTGCCGC
TGGCGGTGCATGGGAAGGCGGAGAGGGTTCTGGCGTGTGAGTGGAACACG
GACGCGATTGCGGCCTTGAGGTTCAATCTCAGGAAAAATGGGGTGGAGGG
GGTAGTGGAGGTGATAGAAGGGGACAACCGGGTGACTACTCTTGGCTTGC
CTGATATGATAGCACACCGCGTACACCTGGGTTTGATCCCTAGTAGTGAA
GAGGGGTGGCCCATTGCAGTGCGTTTGTTAAGAGAGGAAGGAGGGATGCT
GCATGTGCATGGGAATATGTTGGAGGAAGCCGTTGAGGCGTGGGTTGAAA
GGGTTAAGAGAGAGGTGGCAGAAATAGGGAATGGATTGGGGAGGACCTGG
GCGGGGAAGGGGGTGAAGTGCGTGCATGTGGAGAGGGTCAAAAGCTATGC
GCCGTCGGTGTGGCATTTTGTGGCGGATGTGCAGTGTGGGGATGGGGGGG
GAAAGAGGACTGGAGGAAGGGAACAGGATTAAACTGCTCTCGCTTGGTCA
GAGAAAATGAGAAAAAATACGCTTTAACGGAGGCTGGAATTAGGAGGCCT
TGCTGAATGTGGGGAAGCTGAGGGGATGGGTGGTAGGGATAGCAGAGGGC
CATTTACTGAGGTGTCAATTTTGACAACAAAAGAAAAGATGAAAGAAAGA
AGAAAGTTTGCATATAAATGGGTGG

protein sequence of NO18G01070.1

>NO18G01070.1-protein ID=NO18G01070.1-protein|Name=NO18G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1251bp
MESARRTRDFDKNKAQRLHDLLGDKAGGGKDRSKKGSLDAPIVELVGLIN
GHRNYVTTSSCSGRIALFQDVDGVVCRKASGNWLLSSHAPVTLQAVRGAL
AGCDARGQASGSVTLKQEPLVLHIECRDLVSAESLLKLGVASGFRESGIS
LGKKRVLVAIRTGANSLEAPLLLQGIDMMTEDGLDALVALANRKFGLNAK
RTQRFTETLAVAFAEEDKMESQEQGLATTTMKGNCPESRSSSSIQAAKHA
LAEERRKRRDGVKKIKKHKKEWRWVEPEIASSPSPTTVKAADKQLLRRWG
HSLCEVETGVYWMFGGWCEKPAGRQNDLIEIKVQVEAPSLTLSLQALNNP
SSLPKLHESATTTAMNTPAAREKHAAVAFPSSHPSHCKGTLVVFGGRASP
HRAFGDLWLYRREEGWKEVIPLGTVPSPRWSHSMTLLRHRSCIVVYGGRD
GHNVFGGKLHILSPFEDGMWAWGEMVLSRAEPARPLPPLFAHTATVVGGE
RVGEEERRLFLWGGLEDLSGEGVKGEGFSIDLAAQTYCSISCTKEGGGKG
KSEGAGGEEGEGGGKRGEKCEGEEEGEKEEARGGRGGGEEENDDEEGVGG
GAGGGGGDGRYGHAATMVGERLLITGGMSTEYMYNEEEEEEDEGGEGKRS
QIQIQAPMSVLMLEPLAAAHKSVRLKLTQVAARFPIAMLVPPLIHHTAVA
FHAGNDILDAKETGAGAGAGAGAGAGAGAGAGAAVLIIGGGVQSFAFSPF
FAPPLVILPPSWSTFKSKKKERNAAIRETTAAGTAPMAFKKVALPSPPPC
PCLLTDASHTKLLKTALERAGLFDRQRRIAQSTSIPGCMAIPILHLEDES
DTNTTKPLLAELQAWCTSTSASAPASLPHSRALRLFVETLKGQPPFELIK
GWGEECLPYGAATLNNQLLRLQTAVQTALEQASLPPSLLTPQLLAALHVE
RLGDVLLLEDNHPFRDSQAWGKAYPFLWPALLTVFPGATRLARMAPIQGG
TKRRSQVQLLYPPLPPSPEAAEAAAASAVPGPGCPGWVMVRENGLKYGFD
MTKSMFSSGNVSEKARIARMDCRGETVVDLYAGIGYYTLPLAVHGKAERV
LACEWNTDAIAALRFNLRKNGVEGVVEVIEGDNRVTTLGLPDMIAHRVHL
GLIPSSEEGWPIAVRLLREEGGMLHVHGNMLEEAVEAWVERVKREVAEIG
NGLGRTWAGKGVKCVHVERVKSYAPSVWHFVADVQCGDGGGKRTGGREQD
*

mRNA from alignment at chr18:377945..381919+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO18G01070.1 ID=NO18G01070.1|Name=NO18G01070.1|organism=Nannochloropsis oceanica|type=mRNA|length=3975bp|location=Sequence derived from alignment at chr18:377945..381919+ (Nannochloropsis oceanica)
CAGGTAAATGAAATCTTGCACCTAGCCCCATGGAGTCCGCCAGGCGCACT
CGAGACTTCGACAAGAACAAAGCCCAGCGTTTACACGACTTGCTGGGTGA
CAAGGCAGGCGGCGGGAAAGACCGGTCCAAGAAGGGCAGCCTCGACGCCC
CTATTGTGGAGTTGGTGGGCCTCATCAATGGCCATCGTAACTACGTAACG
ACCAGCTCGTGCTCCGGTCGAATTGCTCTCTTTCAGGATGTGGATGGCGT
GGTCTGTCGCAAGGCCAGCGGGAACTGGTTGTTGTCAAGCCATGCTCCCG
TCACACTCCAAGCAGTACGAGGGGCACTGGCTGGATGCGATGCACGGGGC
CAGGCTAGTGGTTCGGTAACGCTGAAGCAAGAGCCTTTGGTACTGCATAT
CGAATGTCGGGACTTGGTATCGGCAGAAAGTCTACTAAAGTTAGGGGTGG
CAAGCGGATTTCGCGAGTCCGGTATCAGCCTGGGCAAGAAGCGTGTGCTG
GTAGCGATTCGGACGGGGGCCAACTCATTGGAGGCACCTCTACTGCTCCA
GGGTATCGATATGATGACGGAAGATGGGCTGGACGCTTTGGTGGCGCTTG
CCAATCGCAAGTTTGGGCTCAATGCTAAACGCACGCAACGCTTTACTGAG
ACACTGGCAGTGGCCTTTGCGGAAGAGGATAAGATGGAGTCACAGGAGCA
AGGCTTGGCGACGACCACAATGAAGGGCAACTGTCCCGAGAGTAGGAGTA
GCAGCAGTATTCAAGCAGCTAAACATGCCCTGGCAGAGGAAAGGCGAAAG
CGTAGGGATGGCGTAAAAAAGATCAAGAAGCACAAGAAAGAATGGCGGTG
GGTCGAGCCCGAAATTGCCTCCTCTCCCTCCCCAACAACCGTGAAAGCAG
CAGACAAACAGCTTTTGCGACGGTGGGGACACTCACTGTGTGAAGTGGAG
ACAGGGGTGTACTGGATGTTTGGGGGTTGGTGCGAGAAACCGGCGGGGCG
ACAAAACGATCTCATTGAGATAAAGGTGCAGGTGGAGGCACCTAGCTTGA
CTTTATCCCTACAAGCCCTCAACAACCCCTCCTCCCTCCCTAAACTCCAT
GAAAGCGCCACAACGACTGCTATGAATACCCCCGCAGCACGGGAGAAACA
CGCGGCCGTCGCCTTCCCCTCCTCCCACCCCTCTCATTGCAAGGGCACCC
TCGTTGTCTTCGGCGGTCGGGCCTCCCCCCACCGGGCGTTCGGGGATCTA
TGGTTGTATCGACGAGAGGAGGGATGGAAGGAGGTCATTCCATTGGGAAC
GGTACCTAGCCCAAGGTGGAGCCATAGCATGACATTGTTGAGGCATCGGA
GTTGTATTGTTGTGTATGGAGGGAGGGATGGTCATAATGTTTTTGGGGGG
AAGTTGCATATTCTCTCCCCTTTTGAGGATGGAATGTGGGCGTGGGGTGA
AATGGTGTTGTCGAGGGCAGAGCCGGCAAGGCCTTTGCCCCCGCTTTTTG
CGCATACGGCCACAGTTGTGGGAGGAGAAAGGGTGGGGGAGGAGGAGCGA
CGACTGTTTCTGTGGGGGGGGTTGGAGGATTTGAGTGGGGAGGGGGTTAA
GGGGGAGGGGTTTTCGATTGATCTAGCGGCACAGACTTACTGTTCTATTT
CATGCACCAAAGAGGGGGGAGGAAAAGGAAAAAGTGAAGGAGCAGGGGGA
GAAGAAGGAGAAGGAGGAGGAAAAAGAGGAGAAAAATGTGAAGGAGAAGA
AGAGGGGGAAAAGGAAGAAGCAAGAGGAGGAAGAGGAGGAGGAGAAGAAG
AAAATGATGATGAAGAAGGAGTAGGAGGAGGAGCAGGAGGAGGAGGAGGA
GATGGACGCTATGGTCATGCTGCTACGATGGTGGGGGAGAGATTGCTAAT
CACGGGAGGAATGAGTACAGAATACATGTATAATGAGGAAGAGGAAGAGG
AAGATGAAGGTGGTGAAGGAAAGAGATCACAGATACAAATACAGGCGCCG
ATGAGTGTGTTGATGCTGGAGCCATTGGCGGCCGCACACAAAAGCGTGAG
GTTGAAGCTGACACAGGTCGCTGCCCGTTTCCCTATAGCGATGTTGGTCC
CACCTTTGATCCATCACACGGCCGTAGCTTTTCACGCAGGAAATGATATC
CTCGATGCCAAGGAGACAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGG
AGCAGGAGCAGGAGCAGGAGCAGGAGCGGCAGTATTAATAATTGGTGGGG
GTGTGCAGTCCTTTGCGTTTAGCCCTTTCTTCGCGCCGCCCTTGGTAATT
CTCCCTCCTTCCTGGTCAACTTTCAAATCCAAAAAAAAGGAGAGAAACGC
AGCAATACGGGAGACTACCGCAGCAGGAACAGCACCAATGGCGTTTAAAA
AGGTAGCCCTCCCTTCTCCTCCTCCTTGTCCTTGCCTTCTAACCGATGCC
TCTCATACGAAGCTCCTCAAAACGGCCTTGGAACGTGCAGGTCTCTTTGA
TCGACAACGACGCATCGCTCAATCCACCTCCATTCCTGGCTGTATGGCCA
TACCCATCCTACATCTCGAGGACGAAAGTGACACAAATACAACCAAGCCC
CTCCTAGCCGAGCTCCAGGCGTGGTGCACCTCAACATCCGCCTCCGCACC
TGCATCCCTACCCCACTCGCGTGCTCTGCGTCTCTTTGTTGAAACCCTGA
AAGGACAGCCACCATTCGAACTAATTAAAGGTTGGGGCGAAGAATGCCTG
CCCTACGGTGCCGCAACACTCAACAATCAACTCCTTCGCCTCCAGACAGC
CGTCCAAACTGCCCTCGAGCAAGCCTCCCTCCCTCCCTCCCTCCTCACCC
CCCAACTGCTCGCCGCTTTGCACGTCGAGCGTCTCGGGGACGTGTTACTC
TTGGAAGATAATCACCCATTTCGCGATTCCCAAGCGTGGGGGAAAGCCTA
CCCCTTTCTCTGGCCCGCCTTGCTGACCGTCTTTCCCGGGGCCACCCGGC
TGGCGCGCATGGCACCCATCCAAGGAGGTACTAAGCGTCGGTCCCAGGTG
CAGCTTCTTTACCCTCCCCTCCCACCATCACCAGAAGCAGCAGAAGCAGC
AGCCGCGTCTGCTGTTCCGGGGCCAGGGTGCCCGGGTTGGGTGATGGTGC
GTGAGAATGGGCTGAAGTACGGCTTCGACATGACCAAGTCGATGTTTTCC
TCAGGCAACGTGTCAGAGAAAGCACGGATAGCGCGGATGGATTGTCGGGG
GGAGACAGTTGTGGATCTGTACGCTGGAATTGGGTATTACACTTTGCCGC
TGGCGGTGCATGGGAAGGCGGAGAGGGTTCTGGCGTGTGAGTGGAACACG
GACGCGATTGCGGCCTTGAGGTTCAATCTCAGGAAAAATGGGGTGGAGGG
GGTAGTGGAGGTGATAGAAGGGGACAACCGGGTGACTACTCTTGGCTTGC
CTGATATGATAGCACACCGCGTACACCTGGGTTTGATCCCTAGTAGTGAA
GAGGGGTGGCCCATTGCAGTGCGTTTGTTAAGAGAGGAAGGAGGGATGCT
GCATGTGCATGGGAATATGTTGGAGGAAGCCGTTGAGGCGTGGGTTGAAA
GGGTTAAGAGAGAGGTGGCAGAAATAGGGAATGGATTGGGGAGGACCTGG
GCGGGGAAGGGGGTGAAGTGCGTGCATGTGGAGAGGGTCAAAAGCTATGC
GCCGTCGGTGTGGCATTTTGTGGCGGATGTGCAGTGTGGGGATGGGGGGG
GAAAGAGGACTGGAGGAAGGGAACAGGATTAAACTGCTCTCGCTTGGTCA
GAGAAAATGAGAAAAAATACGCTTTAACGGAGGCTGGAATTAGGAGGCCT
TGCTGAATGTGGGGAAGCTGAGGGGATGGGTGGTAGGGATAGCAGAGGGC
CATTTACTGAGGTGTCAATTTTGACAACAAAAGAAAAGATGAAAGAAAGA
AGAAAGTTTGCATATAAATGGGTGG

Coding sequence (CDS) from alignment at chr18:377945..381919+

>NO18G01070.1 ID=NO18G01070.1|Name=NO18G01070.1|organism=Nannochloropsis oceanica|type=CDS|length=3753bp|location=Sequence derived from alignment at chr18:377945..381919+ (Nannochloropsis oceanica)
ATGGAGTCCGCCAGGCGCACTCGAGACTTCGACAAGAACAAAGCCCAGCG
TTTACACGACTTGCTGGGTGACAAGGCAGGCGGCGGGAAAGACCGGTCCA
AGAAGGGCAGCCTCGACGCCCCTATTGTGGAGTTGGTGGGCCTCATCAAT
GGCCATCGTAACTACGTAACGACCAGCTCGTGCTCCGGTCGAATTGCTCT
CTTTCAGGATGTGGATGGCGTGGTCTGTCGCAAGGCCAGCGGGAACTGGT
TGTTGTCAAGCCATGCTCCCGTCACACTCCAAGCAGTACGAGGGGCACTG
GCTGGATGCGATGCACGGGGCCAGGCTAGTGGTTCGGTAACGCTGAAGCA
AGAGCCTTTGGTACTGCATATCGAATGTCGGGACTTGGTATCGGCAGAAA
GTCTACTAAAGTTAGGGGTGGCAAGCGGATTTCGCGAGTCCGGTATCAGC
CTGGGCAAGAAGCGTGTGCTGGTAGCGATTCGGACGGGGGCCAACTCATT
GGAGGCACCTCTACTGCTCCAGGGTATCGATATGATGACGGAAGATGGGC
TGGACGCTTTGGTGGCGCTTGCCAATCGCAAGTTTGGGCTCAATGCTAAA
CGCACGCAACGCTTTACTGAGACACTGGCAGTGGCCTTTGCGGAAGAGGA
TAAGATGGAGTCACAGGAGCAAGGCTTGGCGACGACCACAATGAAGGGCA
ACTGTCCCGAGAGTAGGAGTAGCAGCAGTATTCAAGCAGCTAAACATGCC
CTGGCAGAGGAAAGGCGAAAGCGTAGGGATGGCGTAAAAAAGATCAAGAA
GCACAAGAAAGAATGGCGGTGGGTCGAGCCCGAAATTGCCTCCTCTCCCT
CCCCAACAACCGTGAAAGCAGCAGACAAACAGCTTTTGCGACGGTGGGGA
CACTCACTGTGTGAAGTGGAGACAGGGGTGTACTGGATGTTTGGGGGTTG
GTGCGAGAAACCGGCGGGGCGACAAAACGATCTCATTGAGATAAAGGTGC
AGGTGGAGGCACCTAGCTTGACTTTATCCCTACAAGCCCTCAACAACCCC
TCCTCCCTCCCTAAACTCCATGAAAGCGCCACAACGACTGCTATGAATAC
CCCCGCAGCACGGGAGAAACACGCGGCCGTCGCCTTCCCCTCCTCCCACC
CCTCTCATTGCAAGGGCACCCTCGTTGTCTTCGGCGGTCGGGCCTCCCCC
CACCGGGCGTTCGGGGATCTATGGTTGTATCGACGAGAGGAGGGATGGAA
GGAGGTCATTCCATTGGGAACGGTACCTAGCCCAAGGTGGAGCCATAGCA
TGACATTGTTGAGGCATCGGAGTTGTATTGTTGTGTATGGAGGGAGGGAT
GGTCATAATGTTTTTGGGGGGAAGTTGCATATTCTCTCCCCTTTTGAGGA
TGGAATGTGGGCGTGGGGTGAAATGGTGTTGTCGAGGGCAGAGCCGGCAA
GGCCTTTGCCCCCGCTTTTTGCGCATACGGCCACAGTTGTGGGAGGAGAA
AGGGTGGGGGAGGAGGAGCGACGACTGTTTCTGTGGGGGGGGTTGGAGGA
TTTGAGTGGGGAGGGGGTTAAGGGGGAGGGGTTTTCGATTGATCTAGCGG
CACAGACTTACTGTTCTATTTCATGCACCAAAGAGGGGGGAGGAAAAGGA
AAAAGTGAAGGAGCAGGGGGAGAAGAAGGAGAAGGAGGAGGAAAAAGAGG
AGAAAAATGTGAAGGAGAAGAAGAGGGGGAAAAGGAAGAAGCAAGAGGAG
GAAGAGGAGGAGGAGAAGAAGAAAATGATGATGAAGAAGGAGTAGGAGGA
GGAGCAGGAGGAGGAGGAGGAGATGGACGCTATGGTCATGCTGCTACGAT
GGTGGGGGAGAGATTGCTAATCACGGGAGGAATGAGTACAGAATACATGT
ATAATGAGGAAGAGGAAGAGGAAGATGAAGGTGGTGAAGGAAAGAGATCA
CAGATACAAATACAGGCGCCGATGAGTGTGTTGATGCTGGAGCCATTGGC
GGCCGCACACAAAAGCGTGAGGTTGAAGCTGACACAGGTCGCTGCCCGTT
TCCCTATAGCGATGTTGGTCCCACCTTTGATCCATCACACGGCCGTAGCT
TTTCACGCAGGAAATGATATCCTCGATGCCAAGGAGACAGGAGCAGGAGC
AGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCGG
CAGTATTAATAATTGGTGGGGGTGTGCAGTCCTTTGCGTTTAGCCCTTTC
TTCGCGCCGCCCTTGGTAATTCTCCCTCCTTCCTGGTCAACTTTCAAATC
CAAAAAAAAGGAGAGAAACGCAGCAATACGGGAGACTACCGCAGCAGGAA
CAGCACCAATGGCGTTTAAAAAGGTAGCCCTCCCTTCTCCTCCTCCTTGT
CCTTGCCTTCTAACCGATGCCTCTCATACGAAGCTCCTCAAAACGGCCTT
GGAACGTGCAGGTCTCTTTGATCGACAACGACGCATCGCTCAATCCACCT
CCATTCCTGGCTGTATGGCCATACCCATCCTACATCTCGAGGACGAAAGT
GACACAAATACAACCAAGCCCCTCCTAGCCGAGCTCCAGGCGTGGTGCAC
CTCAACATCCGCCTCCGCACCTGCATCCCTACCCCACTCGCGTGCTCTGC
GTCTCTTTGTTGAAACCCTGAAAGGACAGCCACCATTCGAACTAATTAAA
GGTTGGGGCGAAGAATGCCTGCCCTACGGTGCCGCAACACTCAACAATCA
ACTCCTTCGCCTCCAGACAGCCGTCCAAACTGCCCTCGAGCAAGCCTCCC
TCCCTCCCTCCCTCCTCACCCCCCAACTGCTCGCCGCTTTGCACGTCGAG
CGTCTCGGGGACGTGTTACTCTTGGAAGATAATCACCCATTTCGCGATTC
CCAAGCGTGGGGGAAAGCCTACCCCTTTCTCTGGCCCGCCTTGCTGACCG
TCTTTCCCGGGGCCACCCGGCTGGCGCGCATGGCACCCATCCAAGGAGGT
ACTAAGCGTCGGTCCCAGGTGCAGCTTCTTTACCCTCCCCTCCCACCATC
ACCAGAAGCAGCAGAAGCAGCAGCCGCGTCTGCTGTTCCGGGGCCAGGGT
GCCCGGGTTGGGTGATGGTGCGTGAGAATGGGCTGAAGTACGGCTTCGAC
ATGACCAAGTCGATGTTTTCCTCAGGCAACGTGTCAGAGAAAGCACGGAT
AGCGCGGATGGATTGTCGGGGGGAGACAGTTGTGGATCTGTACGCTGGAA
TTGGGTATTACACTTTGCCGCTGGCGGTGCATGGGAAGGCGGAGAGGGTT
CTGGCGTGTGAGTGGAACACGGACGCGATTGCGGCCTTGAGGTTCAATCT
CAGGAAAAATGGGGTGGAGGGGGTAGTGGAGGTGATAGAAGGGGACAACC
GGGTGACTACTCTTGGCTTGCCTGATATGATAGCACACCGCGTACACCTG
GGTTTGATCCCTAGTAGTGAAGAGGGGTGGCCCATTGCAGTGCGTTTGTT
AAGAGAGGAAGGAGGGATGCTGCATGTGCATGGGAATATGTTGGAGGAAG
CCGTTGAGGCGTGGGTTGAAAGGGTTAAGAGAGAGGTGGCAGAAATAGGG
AATGGATTGGGGAGGACCTGGGCGGGGAAGGGGGTGAAGTGCGTGCATGT
GGAGAGGGTCAAAAGCTATGCGCCGTCGGTGTGGCATTTTGTGGCGGATG
TGCAGTGTGGGGATGGGGGGGGAAAGAGGACTGGAGGAAGGGAACAGGAT
TAA

Synonyms

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