NO18G00670.1, NO18G00670.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO18G00670.1
Unique Name	NO18G00670.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3815
Alignment location	chr18:273897..279606 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr18	genome	chr18:273897..279606 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO18G00670.1 vs.
Match: GAQ83163.1 (4,5-DOPA dioxygenase extradiol [Klebsormidium nitens])

HSP 1 Score: 316.2 bits (809), Expect = 4.300e-82
Identity = 235/612 (38.40%), Postives = 320/612 (52.29%), Query Frame = 0

Query:  573 LLEVEGEEGLADASLNAASTATEDTFATLAETGEKDLAESESAVSSGQFPLMRTKYLVLNHVPPSVAAALSDFLIARPVVDFVELTPKLLFLTRWARGVTQSGNWQETPISSTFDLDGNGQIIGMADTGIDPSVCYVEDRNSRTPYNSVSSTHRKLVTYITFADRQENTEKQGTAHSIGHGTHVASTLVGRSIASTGSALYNGIAPNSKVAFFDIAKYDGAGNIQLYPPGNLNTDLFERLYKAGARVMSMSWGSPDSNCYSSYAVMVDEFMHNYPDALVIFAAGNSGIQGDYSVVTPSTAKSCVTVGASYN----VQQTS----FGLENNVNYVAYFSSFGPTADGRLKPDLVAPGYYITSA------KALTSCDTIQSRGTSMATPVVAGNAALIRQWFMKGLYQN------RAFVPSGALLKAMLVHSSQRMAAYEDANGALRAMAY-PDNHQGYGRMQLDQVVDTKGLYT----LLAYGTQDPRDPRFRRFSKQGDTHEYKLRVSNSTRNGPRALKVTLVWTDRPGSATSCQKTRQSVLTNDLDLTITEPRGKVVYPMATGGAGPDRFNPLEQIIISSPEAGGNYTISVRAFNLVTPQDYALVISGQFS 1160
            L E +   G  + +L  A+ A +      + T E DLA S+  + S       T  +V   V  S   +   +L ARP    VE+      L +WA+ V QS     TPI S+  L G G++IG+ADTGI+ + C+  D +  TP+N +   HRK+V YITF D   NT+      + GHGTHVA TL G +    G   Y G+AP +K+AFFD+  Y  A    L  P +L  +LF   +KAGARV S SWGS     Y S A  VD++M+  PD L +FAAGN G  G +++ +P  AK+C+TVGAS N    +QQ +    FG + +   VA FSS GPT DGR+KPDLVAPG  I SA       A + C     +GTS+ATPVVAG AAL+RQ+F +G Y +       +  PS AL+KA+L+HS   M  Y D +  LR +   PD  QG+GR  L+ V+      T    +  Y      D        +G  H Y + V    R+  +AL+ T+VWTD   +  S        + +DLDL I +P G   +  A G + PD  N +EQI I +P  G    +   A   V PQ YALV++G F+
Sbjct:  215 LEEAQSWAGAWEDALRGAAVARD-----FSCTPEGDLACSDGVLVSCSAE--DTDAVVCGPVLASRLESAVSWLAARPESLAVEIKKAFKPLNKWAKQVVQSTGGASTPIFSS-GLLGQGEVIGLADTGIEMNHCFFLDEDRPTPFNQIDPLHRKVVQYITFDD---NTD----GGAGGHGTHVAGTLAGNTF--VGLHPYAGMAPGAKIAFFDMG-YGSAST--LAAPVSLRQNLFPFAFKAGARVHSNSWGSSFEG-YGSDARDVDDYMYKNPDFLTVFAAGNDGDNGTFTISSPGNAKNCLTVGASLNELAALQQQNPGLGFGQQLDQGTVAPFSSRGPTTDGRIKPDLVAPGMPIFSAYGQPGVTAASDCQMDAQQGTSVATPVVAGLAALVRQYFREGYYPSGSPDPASSLGPSAALVKAVLIHSCVAMTQYLDPSSNLRQLGTPPDPIQGFGRPVLETVLAFAATPTAAQPIATYVRNGGAD---GSVLTRGQAHTYIVTV----RSSKKALRATMVWTDPAAAPNSL-----FPMIHDLDLNIVDPNGTTWF--ANGRSSPDTSNNVEQITIQAPSVGNYSLVIAGASVAVGPQPYALVVTGDFA 791

The following BLAST results are available for this feature:

BLAST of NO18G00670.1 vs.

BLAST of NO18G00670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
GAQ83163.1	4.300e-82	38.40	4,5-DOPA dioxygenase extradiol [Klebsormidium nite...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO18G00670	NO18G00670	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO18G00670.1	NO18G00670.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO18G00670.1.cds1	NO18G00670.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds2	NO18G00670.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds3	NO18G00670.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds4	NO18G00670.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds5	NO18G00670.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds6	NO18G00670.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds7	NO18G00670.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds8	NO18G00670.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds9	NO18G00670.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO18G00670.1.cds10	NO18G00670.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr18:273897..279606-
coding sequence from alignment at chr18:273897..279606-

mRNA sequence

>NO18G00670.1 ID=NO18G00670.1|Name=NO18G00670.1|organism=Nannochloropsis oceanica|type=mRNA|length=3815bp
CACTAGGACGATCCAAGTGCCGCATCCAAGCGTGCGAAAAATCTCCTCAA
AGCTGCGCATGGGTCACTGCGACTGCACCAACTAATAAAGTCCACGATCG
ATACCACGATCACACTGCAGTAAAACAAGACAGTCAGGACAGGATCCGCT
GTTTGCGTGCTGCCGGGTTAGCCCAGATGTCAAAGCAAGGATCGGGGCGT
TTGTCCTCTACTATGCCTTGGCGCCTGTTCCGGACCCTGCCCTGTCTCCT
CCTCCTCTCCCTTCTCTTCCTCCTCCTCCCTACCCTTCCTACCACCGAAG
CTAGCCGCAGCAAGCTCTTTGATCGTCGACGGCGCATGACGACGGATGAG
ACAACCACGGGCACCACCACCACCACCACCACCACCACCACCACCACCAC
CACCACTCCAGAAACCACCGCGACGACAAAAACAAAGGCACCACCCACTT
TTACTCCTGATGTCTCTTCACCAGTCGAGAATAAGTCGGTCGAAACAACG
GAAACAACAGCAGAGGAGATCAGCGAGGAAGTCGAGGAAGTGAAAGAAGT
GATCATGAAAGACACAGCAGGAGCAGCAGATGCAGAAGCAGAAAAACCCG
ATGAGGCAGCCGCCAAAATGGAAAAAGAAGGGACAGCTGCCACCATCTCC
TCCAACCTAACGACAACGACATCACCCACCAGTATTAGCACAATCTCTTC
TTCTGCGACCCCTGTAAAGAAGGACAGCAGCGCTGACAGTACAAGCAGCA
CTGGCGGCACCAGCAGCACCAGCAGCACCACCCCTCCTTCTCCTTTCCCC
ACTGAAACCACGATTCCAAAGAAGGACACTATCGATACTCCTCCTTTTCC
CTCTCTCCCAGCAGCCCCTGTCAATGCTGCATCTTCTGAAGGCGTCATTC
GGCCCGCCTCTCCAAACCCCCCCCCTCCCGTGGTCCTCTTTCAAAAACTC
GTTACAGTCATTGCTCCAGACACTGACAGCAGGAAAGAAGGCACCAATGG
CCCCCTTCCTGATGCATTCAAAACAACCACCACCACCACCAGTGCTGCAG
CCGGGAACAATACCCTCCCAACGTTGTTAGAAGCAGCGGCGGCTGAAGTT
TTGAATGTGGAGGAGGCATTCAAGCAGTGTTTAGGTGCCAGGCTAGGAAC
GGATGCAGTAGCCGATATCGACATGACCACGTTGCTGCCGGGGGCTCGCC
GTCGTTTACAGGAGCTCGCATCCGAAGACGCGTCTTGTGCAGTGCGACGG
CCGTTTATGCTCGTCATCAACCAGACCCAGGGGCTCGAAGCGCTAGGAGG
GCTTATCTCTCAGCCGCTGTTGGACCACAATATCACCAGCTTTCGGGCGA
TGGGGGCAGGGACGACAGGGTGTTTCGTTGTGCCTCTTGATAGATGCGCG
GCTGAGGAGCTACTGCTAGACCCTCGAATCGCCGTTGCCGTTCCTGTAGA
ATCGTCCATGAAGCGACCCCTTCACTTCCAAGAGGGATTAACCAGTACAA
TCGCTGCCATTGAAACTGCTGCAGCTGCAGGAGAGGCAGCTGCAGGCAAT
GCAGTGTCCAAGGCCACTTCGGCGGTGGTTGATGGAGGAGGAGGAGTCGG
GAATATCTCAAGCTTGAATGATCTGCCTACCTTTGCCTGGCCCGGGACTG
GAAGCGATTTTTCGTACATCCCTGACGTGAAAGACGTGATCAACGATGCG
ATGCTTGGAGGGCAGGGAGGGCAGGAAGAGAGGGAGGGAGTGCAAGAGAG
AGGGATAAAGACGATCTCGCTGCACGTTACTCTGGTGGACACGGAGGACA
TGGAGATAAAGGTGGAGCAATGGAGGGAGGAGATGAAGCAAGCAGGGTTG
GATATTGCAAATGTTACATTCACAATCACCGATGAGGTGCCGTTGCTTGA
GGTGGAAGGGGAAGAAGGACTGGCGGATGCGTCGTTAAATGCTGCGTCTA
CCGCTACCGAGGACACATTTGCGACCTTAGCTGAGACTGGAGAGAAAGAT
TTGGCCGAGAGTGAATCTGCGGTGTCGTCCGGGCAGTTTCCTCTCATGCG
AACGAAATATCTGGTCTTGAACCATGTGCCTCCCTCTGTGGCAGCTGCAC
TTTCAGACTTCTTAATCGCGAGGCCCGTGGTGGATTTCGTGGAATTGACG
CCCAAGCTGCTGTTTCTGACACGGTGGGCAAGGGGAGTGACGCAATCAGG
GAACTGGCAGGAGACCCCGATTTCCTCGACGTTCGATTTAGATGGGAACG
GGCAAATTATTGGGATGGCTGACACTGGCATCGATCCCAGTGTCTGTTAC
GTAGAGGATCGGAATTCACGGACCCCTTACAACTCTGTGAGCTCTACCCA
CCGTAAGCTTGTAACGTATATAACGTTCGCTGATCGGCAGGAAAACACAG
AGAAACAAGGCACAGCGCATAGCATTGGCCATGGAACTCACGTTGCAAGC
ACATTGGTAGGGAGAAGTATAGCGTCGACGGGCTCGGCATTGTATAATGG
GATCGCACCTAACAGCAAGGTCGCCTTCTTTGACATTGCCAAATACGACG
GCGCCGGCAACATTCAGCTCTACCCTCCTGGGAATTTGAATACTGACCTG
TTCGAACGCCTCTACAAGGCGGGCGCGCGCGTCATGAGTATGTCCTGGGG
CTCACCCGACAGCAACTGTTACAGCTCTTATGCTGTAATGGTTGATGAAT
TCATGCATAATTATCCCGATGCCTTGGTTATTTTCGCGGCAGGAAACAGC
GGGATCCAAGGGGACTACTCAGTCGTCACCCCTAGTACTGCAAAGAGCTG
TGTCACTGTTGGTGCGAGCTACAACGTTCAACAAACATCGTTCGGACTCG
AAAATAATGTTAACTATGTCGCATACTTTTCAAGTTTTGGGCCGACGGCT
GATGGGAGGCTGAAACCTGATCTGGTGGCGCCAGGGTACTATATCACCTC
GGCGAAGGCCTTGACAAGCTGCGACACGATTCAAAGCCGAGGAACCAGTA
TGGCGACTCCTGTAGTGGCAGGAAATGCAGCATTGATTCGACAGTGGTTC
ATGAAGGGGTTGTATCAGAACAGAGCCTTTGTGCCTAGTGGCGCCTTGTT
GAAGGCAATGCTGGTCCACTCCTCTCAGCGCATGGCTGCATACGAAGACG
CAAATGGTGCCTTGCGCGCGATGGCCTACCCCGACAACCACCAAGGCTAC
GGGCGCATGCAACTTGATCAGGTCGTCGATACTAAGGGTCTCTACACTCT
CCTCGCCTATGGCACACAAGATCCCCGTGATCCGCGTTTCCGTCGATTTT
CCAAACAAGGCGATACCCATGAATATAAGTTGCGTGTGAGCAACAGCACG
AGAAATGGCCCTCGAGCTTTGAAAGTTACCCTTGTCTGGACCGATCGTCC
GGGTTCGGCGACGTCATGCCAGAAGACGCGACAAAGCGTATTGACCAACG
ATTTGGATTTGACTATTACAGAACCAAGAGGAAAGGTTGTGTATCCAATG
GCTACTGGAGGAGCGGGGCCCGATAGATTCAACCCTCTTGAGCAAATCAT
TATTTCGTCCCCTGAGGCCGGGGGAAACTACACAATTTCTGTCCGGGCTT
TTAATTTGGTTACTCCTCAAGATTATGCGCTTGTTATCTCGGGACAATTC
TCTGGCTTTGCGTACAATGAGACAGCAGGAGCATTCGGGCCGACAAATAG
CGTTTGGGCGAGTTTTGTCAATTTGTTAAATGGAAGCACAGGAGCCCCAC
CGGAGAAACCGGCCCCAAGGCCAGGGGATGCAAACCGGGTAGAACTACAC
GGAGGGTTAGCGTAG

protein sequence of NO18G00670.1

>NO18G00670.1-protein ID=NO18G00670.1-protein|Name=NO18G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1213bp
MSKQGSGRLSSTMPWRLFRTLPCLLLLSLLFLLLPTLPTTEASRSKLFDR
RRRMTTDETTTGTTTTTTTTTTTTTTTPETTATTKTKAPPTFTPDVSSPV
ENKSVETTETTAEEISEEVEEVKEVIMKDTAGAADAEAEKPDEAAAKMEK
EGTAATISSNLTTTTSPTSISTISSSATPVKKDSSADSTSSTGGTSSTSS
TTPPSPFPTETTIPKKDTIDTPPFPSLPAAPVNAASSEGVIRPASPNPPP
PVVLFQKLVTVIAPDTDSRKEGTNGPLPDAFKTTTTTTSAAAGNNTLPTL
LEAAAAEVLNVEEAFKQCLGARLGTDAVADIDMTTLLPGARRRLQELASE
DASCAVRRPFMLVINQTQGLEALGGLISQPLLDHNITSFRAMGAGTTGCF
VVPLDRCAAEELLLDPRIAVAVPVESSMKRPLHFQEGLTSTIAAIETAAA
AGEAAAGNAVSKATSAVVDGGGGVGNISSLNDLPTFAWPGTGSDFSYIPD
VKDVINDAMLGGQGGQEEREGVQERGIKTISLHVTLVDTEDMEIKVEQWR
EEMKQAGLDIANVTFTITDEVPLLEVEGEEGLADASLNAASTATEDTFAT
LAETGEKDLAESESAVSSGQFPLMRTKYLVLNHVPPSVAAALSDFLIARP
VVDFVELTPKLLFLTRWARGVTQSGNWQETPISSTFDLDGNGQIIGMADT
GIDPSVCYVEDRNSRTPYNSVSSTHRKLVTYITFADRQENTEKQGTAHSI
GHGTHVASTLVGRSIASTGSALYNGIAPNSKVAFFDIAKYDGAGNIQLYP
PGNLNTDLFERLYKAGARVMSMSWGSPDSNCYSSYAVMVDEFMHNYPDAL
VIFAAGNSGIQGDYSVVTPSTAKSCVTVGASYNVQQTSFGLENNVNYVAY
FSSFGPTADGRLKPDLVAPGYYITSAKALTSCDTIQSRGTSMATPVVAGN
AALIRQWFMKGLYQNRAFVPSGALLKAMLVHSSQRMAAYEDANGALRAMA
YPDNHQGYGRMQLDQVVDTKGLYTLLAYGTQDPRDPRFRRFSKQGDTHEY
KLRVSNSTRNGPRALKVTLVWTDRPGSATSCQKTRQSVLTNDLDLTITEP
RGKVVYPMATGGAGPDRFNPLEQIIISSPEAGGNYTISVRAFNLVTPQDY
ALVISGQFSGFAYNETAGAFGPTNSVWASFVNLLNGSTGAPPEKPAPRPG
DANRVELHGGLA*

mRNA from alignment at chr18:273897..279606-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO18G00670.1 ID=NO18G00670.1|Name=NO18G00670.1|organism=Nannochloropsis oceanica|type=mRNA|length=5710bp|location=Sequence derived from alignment at chr18:273897..279606- (Nannochloropsis oceanica)
CACTAGGACGATCCAAGTGCCGCATCCAAGCGTGCGAAAAATCTCCTCAA
AGCTGCGCATGGGTCACTGCGACTGCACCAACTAATAAAGTCCACGATCG
ATACCACGATCACACTGCAGTAAAACAAGACAGTCAGGACAGGATCCGCT
GTTTGCGTGCTGCCGGGTTAGCCCAGATGTCAAAGCAAGGATCGGGGCGT
TTGTCCTCTACTATGCCTTGGCGCCTGTTCCGGACCCTGCCCTGTCTCCT
CCTCCTCTCCCTTCTCTTCCTCCTCCTCCCTACCCTTCCTACCACCGAAG
CTAGCCGCAGCAAGCTCTTTGATCGTCGACGGCGCATGACGACGGATGAG
ACAACCACGGGCACCACCACCACCACCACCACCACCACCACCACCACCAC
CACCACTCCAGAAACCACCGCGACGACAAAAACAAAGGCACCACCCACTT
TTACTCCTGATGTCTCTTCACCAGTCGAGAATAAGTCGGTCGAAACAACG
GAAACAACAGCAGAGGAGATCAGCGAGGAAGTCGAGGAAGTGAAAGAAGT
GATCATGAAAGACACAGCAGGAGCAGCAGATGCAGAAGCAGAAAAACCCG
ATGAGGCAGCCGCCAAAATGGAAAAAGAAGGGACAGCTGCCACCATCTCC
TCCAACCTAACGACAACGACATCACCCACCAGTATTAGCACAATCTCTTC
TTCTGCGACCCCTGTAAAGAAGGACAGCAGCGCTGACAGTACAAGCAGCA
CTGGCGGCACCAGCAGCACCAGCAGCACCACCCCTCCTTCTCCTTTCCCC
ACTGAAACCACGATTCCAAAGAAGGACACTATCGATACTCCTCCTTTTCC
CTCTCTCCCAGCAGCCCCTGTCAATGCTGCATCTTCTGAAGGCGTCATTC
GGCCCGCCTCTCCAAACCCCCCCCCTCCCGTGGTCCTCTTTCAAAAACTC
GTTACAGTCATTGCTCCAGACACTGACAGCAGGAAAGAAGGCACCAATGG
CCCCCTTCCTGATGCATTCAAAACAACCACCACCACCACCAGTGCTGCAG
CCGGGAACAATACCCTCCCAACGTTGTTAGAAGCAGCGGCGGCTGAAGTT
TTGAATGTGGAGGAGGCATTCAAGCAGTGTTTAGGTGCCAGGCTAGGAAC
GGATGCAGTAGCCGATATCGACATGACCACGTTGCTGCCGGGGGCTCGCC
GTCGTTTACAGGTGAATAAGAAAGGGAGAAGGGAGGGGAGGAGAGAGATG
AAGAGGGTCCAGTGCCCCCTTTTTTCAAAGTCCTTGCACACTGTGCCCTT
TCATCCTCCTTCCCTTGGGTGTGCAGTAAGATCTGACCCCCAAAGAATTG
TCTTGTGCCAGCTCTCACTTCATTTCATCGATTGTCGGCCCGATTCTAGA
AATATTTATACTTGGGTTTACCCTCCCTCCCTCCCTCTCTTATCTTCTCC
CTCCTCTTTCCCCACCCCTACAGGAGCTCGCATCCGAAGACGCGTCTTGT
GCAGTGCGACGGCCGTTTATGCTCGTCATCAACCAGACCCAGGGGCTCGA
AGCGCTAGGAGGGCTTATCTCTCAGCCGCTGTTGGACCACAATATCACCA
GCTTTCGGGCGATGGGGGCAGGGACGACAGGGTGTTTCGTTGTGCCTCTT
GATAGGTAGGTAGGTTGGGAAAAATGGAGGGAGGGAGGTAGAGAAGATTC
TAGGAAAGAAGAGAGGGATAGATCGTTCACCGTTCTCTGTTATGCTCTTT
TTCTTCCTCAAAGAGAATACTACTTTTCTTCCCCATGACGTTAAGCTAAT
CTGCTGACGTGCTCATGGCCCTCCCCTCTTTCCTCCCTCCCTCTTCTCCC
TAGATGCGCGGCTGAGGAGCTACTGCTAGACCCTCGAATCGCCGTTGCCG
TTCCTGTAGAATCGTCCATGAAGCGACCCCTTCACTTCCAAGAGGGATTA
ACCAGTACAATCGCTGCCATTGAAACTGCTGCAGCTGCAGGAGAGGCAGC
TGCAGGCAATGCAGTGTCCAAGGCCACTTCGGCGGTGGTTGATGGAGGAG
GAGGAGTCGGGAATATCTCAAGCTTGAATGATCTGCCTACCTTTGCCTGG
CCCGGGACTGGAAGCGATTTTTCGTACATCCCTGACGTGAAAGACGTGAT
CAACGATGCGATGCTTGGAGGGCAGGGAGGGCAGGAAGAGAGGGAGGGAG
TGCAAGAGAGAGGGATAAAGACGATCTCGCTGCACGTTACTCTGGTGGAC
ACGGAGGACATGGAGATAAAGGTGGAGCAATGGAGGGAGGAGATGAAGCA
AGCAGGGTTGGATATTGCAAATGTTACATTCACAATCACCGATGAGGTGC
CGTTGCTTGAGGTGGAAGGGGAAGAAGGACTGGCGGATGCGTCGTTAAAT
GCTGCGTCTACCGCTACCGAGGACACATTTGCGACCTTAGCTGAGACTGG
AGAGAAAGATTTGGCCGAGAGTGAATCTGCGGTGTCGTCCGGGCAGTTTC
CTCTCATGCGAACGAAATATCTGGTCTTGAACCATGTGCCTCCCTCTGTG
GCAGCTGCACTTTCAGACTTCTTAATCGCGAGGCCCGTGGTGGATTTCGT
GGAATTGACGCCCAAGCTGCTGTTTCTGACACGGTGGGCAAGGGGAGTGA
CGCAATCAGGGAACTGGCAGGAGACCCCGATTTCCTCGACGTTCGATTTA
GATGGGAACGGGCAAATTATTGGGGTAAGTTGATCATTTGTGATAACCTA
TTTACAATTATATCCATAAACTTGATTTGTATAAATGTAATTCTCCCTTC
TCATTCCCTGCCTCGAGCAATCTCTCCTTCAATTATTCCGTCCATTCACA
TGGCAGGCACCGGCATCGACCCTGGCGTCCGCTTCACGCGTGACGGCCGC
CCTTACCTACCGGTAACTTACTCCTCGTCCCTTCCTTCCTCCCTTCCTCC
CTCCCTTTGCGACTCTCTTCTTTCAGATGGCTGACACTGGCATCGATCCC
AGTGTCTGTTACGTAGAGGATCGGAATTCACGGACCCCTTACAACTCTGT
GAGCTCTACCCACCGTAAGCTTGTAACGTATATAACGTTCGCTGATCGGC
AGGAAAACACAGAGAAACAAGGCACAGCGCATAGCATTGGCCATGGAACT
CACGTTGCAAGCACATTGGTAGGGAGAAGTATAGCGTCGACGGGCTCGGC
ATTGTATAATGGGATCGCACCTAACAGCAAGGTAGGTAGGAGGGAGGAGG
GATGGATGGAAGGGGGAGGGGAGGAATCACGTTGTAATTAGACATTGGGC
TCAACCGGAAAGTACCGAGAGCTGTCGTATATCAGCGAATTATGCGACCT
ACTGACTTTCGGGGGTTTGATCTGAGATATTTTTATCACAAATGTTTTGG
GCGCTTACTTACCCATGCACCCAAATAAACAAAACAAAAACAGGTCGCCT
TCTTTGACATTGCCAAATACGACGGCGCCGGCAACATTCAGCTCTACCCT
CCTGGGAATTTGAATACTGACCTGTTCGAACGCCTCTACAAGGCGGGCGC
GCGCGTCATGAGTATGTCCTGGGGCTCACCCGACAGCAACTGTTACAGCT
CTTATGCTGTAATGGTTGATGAATTCATGCATAATTATCCCGATGCCTTG
GTTATTTTCGCGGCAGGAAACAGCGGGATCCAAGGGGACTACTCAGTCGT
CACCCCTAGTACTGCAAAGAGCTGTGTCACTGTTGGTGCGAGCTACAACG
TTCAACAAACATCGTTCGGACTCGAAAATAATGTTAACTATGTCGCATAC
TTTTCAAGTTTTGGGCCGACGGCTGATGGGAGGCTGAAACCTGATCTGGT
GGCGCCAGGGTACTATATCACCTCGGCGAAGGCCTTGACAAGCTGCGACA
CGATTCAAAGCCGAGGAACCAGTATGGCGACTCCTGTAGTGGCAGGAAAT
GCAGCATTGATTCGACAGTGGTTCATGAAGGGGTTGTATCAGAACAGAGC
CTTTGTGCCTAGTGGCGCCTTGTTGAAGGCAATGCTGGTAAGTGTGTGTG
ACCTTTCCCCCCGCTTGATGTCTCCCTGCATGTTCTTCCACCAGATGACA
ATTAGAGGGCTACAATATGATTTCCTCCATCTGACCCTCTCATGTTTAAA
CTAGGTCCACTCCTCTCAGCGCATGGCTGCATACGAAGACGCAAATGGTG
CCTTGCGCGCGATGGCCTACCCCGACAACCACCAAGGCTACGGGCGCATG
CAACTTGATCAGGTAGGTCTTTCTTTTACTCCTTGCTTTCTCCTTCTTCT
CGAGAGTGTTACCCAAATTTACTTCTCTCTACCCCTCTCTGCCTTTCGTT
GCAGGTCGTCGATACTAAGGGTCTCTACACTCTCCTCGCCTATGGCACAC
AAGATCCCCGTGATCCGCGTTTCCGTCGATTTTCCAAACAAGGCGATACC
CATGAATATAAGTTGCGTGTGAGCAACAGCACGAGAAATGGCCCTCGAGC
TTTGAAAGTTACCCTTGTCTGGACCGATCGTCCGGGTTCGGCGACGTCAT
GCCAGAAGACGCGACAAAGCGTATTGACCAACGATTTGGATTTGACTATT
ACAGAACCAAGAGGAAAGGTTGTGTATCCAATGGCTACTGGAGGAGCGGG
GCCCGATAGGTAGGGAGTTTTTGGGGAGGAATTGAAAGGGGACAAGAGAT
TGTGTGTCCTGATTTATTGTGTGTTTGTCGGGAGGATTGCCGAGGCCGTT
TCAGAAGACCAGAGGAAAGTGGGTTGCATGGTTTCCCCCCATACTTGCTT
TCGATCGAGTCACCCTTTTCAAAAGATGCTCATATAACCTCTCACTTCCT
ATTTCTCCTCTTACCCTCCCATCCCCCCTTCTCTGTAACTTCCACACATA
GATTCAACCCTCTTGAGCAAATCATTATTTCGTCCCCTGAGGCCGGGGGA
AACTACACAATTTCTGTCCGGGCTTTTAATTTGGTTACTCCTCAAGATTA
TGCGCTTGTTATCTCGGGACAATTCTCTGGCTTTGCGTACAATGAGACAG
CAGGAGCATTCGGGCCGGTAAGGAGGGAGAGGACTGGAGGGAAGGAAAGA
AGAAGGGGACAAAGGGTAGGATCTGTAAATACACGTGACTATTAATCTTA
AAAGCTGGTAGCCACCCCCTTCTCATTTCTCTCACCTTTTGTGAATAAAT
TTTAGATGAGAAATCTAAATCGATGCGTTCTGTAATGTAAAGTACGGCTG
TTAAAGCGATTGTCGCAAACTTTTATGTTCGACTCACCCCTCCCTCCTTC
TCTTTCTTTCTCCCTCCCTTTCCCCCTCCCTCCCTCCTTCCGTCGTGCAG
ACAAATAGCGTTTGGGCGAGTTTTGTCAATTTGTTAAATGGAAGCACAGG
AGGTGCAATAATGATGGTATTGTTTTTGTGCCTGATTGGTGTAGCTTCCA
TAAGTTTGTGTGTCCGCCCGCCAGCCAGACAGAGACTACTAGATTCCATA
GAATCCATGGCAAGAAGAGGAGGACAAGGAGGATTGATGCAGGGAGGATT
AAATGCAGCGAGAGGTGCAGGAACAGGAAGGAGGGAGGGAGTGGGAGAGA
GACACGTAGATGCAGAAGGACCCTCTTTGGCATATGTAGCCCCACCGGAG
AAACCGGCCCCAAGGCCAGGGGATGCAAACCGGGTAGAACTACACGGAGG
GTTAGCGTAG

Coding sequence (CDS) from alignment at chr18:273897..279606-

>NO18G00670.1 ID=NO18G00670.1|Name=NO18G00670.1|organism=Nannochloropsis oceanica|type=CDS|length=3639bp|location=Sequence derived from alignment at chr18:273897..279606- (Nannochloropsis oceanica)
ATGTCAAAGCAAGGATCGGGGCGTTTGTCCTCTACTATGCCTTGGCGCCT
GTTCCGGACCCTGCCCTGTCTCCTCCTCCTCTCCCTTCTCTTCCTCCTCC
TCCCTACCCTTCCTACCACCGAAGCTAGCCGCAGCAAGCTCTTTGATCGT
CGACGGCGCATGACGACGGATGAGACAACCACGGGCACCACCACCACCAC
CACCACCACCACCACCACCACCACCACCACTCCAGAAACCACCGCGACGA
CAAAAACAAAGGCACCACCCACTTTTACTCCTGATGTCTCTTCACCAGTC
GAGAATAAGTCGGTCGAAACAACGGAAACAACAGCAGAGGAGATCAGCGA
GGAAGTCGAGGAAGTGAAAGAAGTGATCATGAAAGACACAGCAGGAGCAG
CAGATGCAGAAGCAGAAAAACCCGATGAGGCAGCCGCCAAAATGGAAAAA
GAAGGGACAGCTGCCACCATCTCCTCCAACCTAACGACAACGACATCACC
CACCAGTATTAGCACAATCTCTTCTTCTGCGACCCCTGTAAAGAAGGACA
GCAGCGCTGACAGTACAAGCAGCACTGGCGGCACCAGCAGCACCAGCAGC
ACCACCCCTCCTTCTCCTTTCCCCACTGAAACCACGATTCCAAAGAAGGA
CACTATCGATACTCCTCCTTTTCCCTCTCTCCCAGCAGCCCCTGTCAATG
CTGCATCTTCTGAAGGCGTCATTCGGCCCGCCTCTCCAAACCCCCCCCCT
CCCGTGGTCCTCTTTCAAAAACTCGTTACAGTCATTGCTCCAGACACTGA
CAGCAGGAAAGAAGGCACCAATGGCCCCCTTCCTGATGCATTCAAAACAA
CCACCACCACCACCAGTGCTGCAGCCGGGAACAATACCCTCCCAACGTTG
TTAGAAGCAGCGGCGGCTGAAGTTTTGAATGTGGAGGAGGCATTCAAGCA
GTGTTTAGGTGCCAGGCTAGGAACGGATGCAGTAGCCGATATCGACATGA
CCACGTTGCTGCCGGGGGCTCGCCGTCGTTTACAGGAGCTCGCATCCGAA
GACGCGTCTTGTGCAGTGCGACGGCCGTTTATGCTCGTCATCAACCAGAC
CCAGGGGCTCGAAGCGCTAGGAGGGCTTATCTCTCAGCCGCTGTTGGACC
ACAATATCACCAGCTTTCGGGCGATGGGGGCAGGGACGACAGGGTGTTTC
GTTGTGCCTCTTGATAGATGCGCGGCTGAGGAGCTACTGCTAGACCCTCG
AATCGCCGTTGCCGTTCCTGTAGAATCGTCCATGAAGCGACCCCTTCACT
TCCAAGAGGGATTAACCAGTACAATCGCTGCCATTGAAACTGCTGCAGCT
GCAGGAGAGGCAGCTGCAGGCAATGCAGTGTCCAAGGCCACTTCGGCGGT
GGTTGATGGAGGAGGAGGAGTCGGGAATATCTCAAGCTTGAATGATCTGC
CTACCTTTGCCTGGCCCGGGACTGGAAGCGATTTTTCGTACATCCCTGAC
GTGAAAGACGTGATCAACGATGCGATGCTTGGAGGGCAGGGAGGGCAGGA
AGAGAGGGAGGGAGTGCAAGAGAGAGGGATAAAGACGATCTCGCTGCACG
TTACTCTGGTGGACACGGAGGACATGGAGATAAAGGTGGAGCAATGGAGG
GAGGAGATGAAGCAAGCAGGGTTGGATATTGCAAATGTTACATTCACAAT
CACCGATGAGGTGCCGTTGCTTGAGGTGGAAGGGGAAGAAGGACTGGCGG
ATGCGTCGTTAAATGCTGCGTCTACCGCTACCGAGGACACATTTGCGACC
TTAGCTGAGACTGGAGAGAAAGATTTGGCCGAGAGTGAATCTGCGGTGTC
GTCCGGGCAGTTTCCTCTCATGCGAACGAAATATCTGGTCTTGAACCATG
TGCCTCCCTCTGTGGCAGCTGCACTTTCAGACTTCTTAATCGCGAGGCCC
GTGGTGGATTTCGTGGAATTGACGCCCAAGCTGCTGTTTCTGACACGGTG
GGCAAGGGGAGTGACGCAATCAGGGAACTGGCAGGAGACCCCGATTTCCT
CGACGTTCGATTTAGATGGGAACGGGCAAATTATTGGGATGGCTGACACT
GGCATCGATCCCAGTGTCTGTTACGTAGAGGATCGGAATTCACGGACCCC
TTACAACTCTGTGAGCTCTACCCACCGTAAGCTTGTAACGTATATAACGT
TCGCTGATCGGCAGGAAAACACAGAGAAACAAGGCACAGCGCATAGCATT
GGCCATGGAACTCACGTTGCAAGCACATTGGTAGGGAGAAGTATAGCGTC
GACGGGCTCGGCATTGTATAATGGGATCGCACCTAACAGCAAGGTCGCCT
TCTTTGACATTGCCAAATACGACGGCGCCGGCAACATTCAGCTCTACCCT
CCTGGGAATTTGAATACTGACCTGTTCGAACGCCTCTACAAGGCGGGCGC
GCGCGTCATGAGTATGTCCTGGGGCTCACCCGACAGCAACTGTTACAGCT
CTTATGCTGTAATGGTTGATGAATTCATGCATAATTATCCCGATGCCTTG
GTTATTTTCGCGGCAGGAAACAGCGGGATCCAAGGGGACTACTCAGTCGT
CACCCCTAGTACTGCAAAGAGCTGTGTCACTGTTGGTGCGAGCTACAACG
TTCAACAAACATCGTTCGGACTCGAAAATAATGTTAACTATGTCGCATAC
TTTTCAAGTTTTGGGCCGACGGCTGATGGGAGGCTGAAACCTGATCTGGT
GGCGCCAGGGTACTATATCACCTCGGCGAAGGCCTTGACAAGCTGCGACA
CGATTCAAAGCCGAGGAACCAGTATGGCGACTCCTGTAGTGGCAGGAAAT
GCAGCATTGATTCGACAGTGGTTCATGAAGGGGTTGTATCAGAACAGAGC
CTTTGTGCCTAGTGGCGCCTTGTTGAAGGCAATGCTGGTCCACTCCTCTC
AGCGCATGGCTGCATACGAAGACGCAAATGGTGCCTTGCGCGCGATGGCC
TACCCCGACAACCACCAAGGCTACGGGCGCATGCAACTTGATCAGGTCGT
CGATACTAAGGGTCTCTACACTCTCCTCGCCTATGGCACACAAGATCCCC
GTGATCCGCGTTTCCGTCGATTTTCCAAACAAGGCGATACCCATGAATAT
AAGTTGCGTGTGAGCAACAGCACGAGAAATGGCCCTCGAGCTTTGAAAGT
TACCCTTGTCTGGACCGATCGTCCGGGTTCGGCGACGTCATGCCAGAAGA
CGCGACAAAGCGTATTGACCAACGATTTGGATTTGACTATTACAGAACCA
AGAGGAAAGGTTGTGTATCCAATGGCTACTGGAGGAGCGGGGCCCGATAG
ATTCAACCCTCTTGAGCAAATCATTATTTCGTCCCCTGAGGCCGGGGGAA
ACTACACAATTTCTGTCCGGGCTTTTAATTTGGTTACTCCTCAAGATTAT
GCGCTTGTTATCTCGGGACAATTCTCTGGCTTTGCGTACAATGAGACAGC
AGGAGCATTCGGGCCGACAAATAGCGTTTGGGCGAGTTTTGTCAATTTGT
TAAATGGAAGCACAGGAGCCCCACCGGAGAAACCGGCCCCAAGGCCAGGG
GATGCAAACCGGGTAGAACTACACGGAGGGTTAGCGTAG

Synonyms

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