NO17G02070.1, NO17G02070.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G02070.1
Unique Name	NO17G02070.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3200
Alignment location	chr17:595369..599200 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:595369..599200 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G02070.1 vs.
Match: EWM24208.1 (Kinetochore protein Ndc80 [Nannochloropsis gaditana])

HSP 1 Score: 981.1 bits (2535), Expect = 1.700e-282
Identity = 533/636 (83.81%), Postives = 566/636 (88.99%), Query Frame = 0

Query:    1 MALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKQAKPQGGRLSLHPSSSSTASSGTSFSSTTASSMLRNSNGPPRKSSTGLSRKSTAYGSHARQDPRPNTDKSYIQTSIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEEEVLQFFKAMHYPFPISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSSGSSSSVDDFERADEKALFEYLGKAYKAFLDGDDELYEKLEDGLVGSFEGRCGEVEAQCAVLEANIAQMQAEAQVCRTRHAALPGLRQRRADYESDLGKFRTLIEQLTAHREGLAAKVEKREGELAELYRSLEMVRTETAELKQVVAGQELSPEDVARMQQERVRLDEALGKAREHKGKMQKALWEAEMELSRAVVDLETAAQTFNGKAASLQLIPITARNSNGIQYEMSVSKGAVSASAEPQDLIGLDIKGVIRPSLGQIKNVILDKVHEARTSVLKMLDEEAKSEEEVAEAVAAFEVMEGKVKKQEEGYRSEKARMEANMAEKSADVERVEEQVLHLRSQVVVELESRAARNQQRLTQLQAELALEREEHEGVSKVILECIMGALHALADHKEEVKRRLEEF 637
            MALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDK +KPQG R SLHPSSSS+     SFSSTTASS LRNSNGPPRKSSTGL RKSTAYGSH RQDPRPNTDK YIQ SIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLE+EVL FFKAM YPF ISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGS     SVDDFERADEKALFEYLGKAYKAFLDGDD+LY +LED LVGSFE RCGE++AQC  LE  I  M+ E   C TRHAALPGL+QR +DY SDLGKFR+LIEQLTAHREGLAAKVEKRE EL+ LYRSLE VR +  ELK VVA QELSPEDVARMQQER RLDEAL KAREHK KM K LWEAE+E+SRAVVDLETAAQTFN KAA+L LIPITARNSNGIQYEM VSKGAVSASAEP++LIGLD+KGVIRPSL QIKNV+LDKVHEARTSVLKMLDEEAK+EEEVAEAVA  E +EGKVKKQEEGY++EKARMEA+MAEKS++V+ VEEQVLHLRS+V+V+LE+R  RN QRL QL+AEL LEREEHE  SK I E IMGALHALADHKEEVKRRL  F
Sbjct:   25 MALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQG-RASLHPSSSSS-----SFSSTTASSSLRNSNGPPRKSSTGL-RKSTAYGSHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMF 653

The following BLAST results are available for this feature:

BLAST of NO17G02070.1 vs.

BLAST of NO17G02070.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24208.1	1.700e-282	83.81	Kinetochore protein Ndc80 [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G02070	NO17G02070	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G02070.1	NO17G02070.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G02070.1.cds1	NO17G02070.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02070.1.cds2	NO17G02070.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02070.1.cds3	NO17G02070.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02070.1.cds4	NO17G02070.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:595369..599200-
coding sequence from alignment at chr17:595369..599200-

mRNA sequence

>NO17G02070.1 ID=NO17G02070.1|Name=NO17G02070.1|organism=Nannochloropsis oceanica|type=mRNA|length=3200bp
CAGAGAAGACATGCTCCACTGACAAGAACAAGGCGAAGACAAGACTGGGG
TAAGGAAAGTAGGGCATGGCCAGCCGTTTTCGCGCGCTTGCTCTCGTATG
AAAAAAAGTTAACGAGGCTCCTCCTCCTCGGCTTCCCTCTGTGTGCGTCG
CACCACTATCCTCGTGTCTGCGACTCTACCAGTGGCATAGAGAATATTTC
CTGTCTGTTGCATGGAAGTTGTGGTGGGAACAGTGGTTCGGTCGGGTAGA
AGAAGACGGACAGACGAGGCAAGAGCAGCACCATGGCCCCTGGTCGTTCG
CTCCCTGATCTTATGCCCATGCCCCCCTCATGCTCTCCAAGCGACCATAT
GCGCTCACACAAACACATCCTCCATGTCTCTGCACACAAGTCAACGCCAT
CCCTCTTTATTTTTGTCTGCCGACAAGGCGACGTCAACGCGCTGGCCTCT
TGCGTGCGTCCGTGGCCTGGCCCGCTCCCCTTCCGCAAAGCGATCGATCT
CCTCATCGACAAACATGCTTTCACTCACCACGCCCAAACCTGTCTCTTCG
TTCGCACACACCACAGCCCTCTGCTTCTCAAGCGATCACAAGTAAGTCAC
CACTTTCATGGCGTTGAGCCGGCGCCGGGGCACCCTGGAGCCGCTCTCCT
CCAGCGGTTTCAACCAGCGACAGAGCATGGGCATGCCCAGCCGTGGCGTC
TCGCGCACCTCCTTGGGACCCAACTTTGACAAGCAAGCCAAGCCACAGGG
CGGCCGTCTCTCTCTGCACCCCTCCTCCTCGTCCACCGCCTCCAGCGGCA
CTTCCTTCTCCTCCACCACCGCCTCCTCCATGCTCCGCAACAGCAATGGC
CCCCCCCGGAAGTCGTCAACGGGGCTCAGTCGCAAAAGCACTGCCTACGG
CTCTCATGCCCGGCAAGACCCCAGACCCAACACGGACAAGAGCTACATCC
AAACAAGCATTCGGGGGCTGATCAACTACCTGACGGATCACAACTATGAC
CAGCCGTTCAGTGCTAAGATATTGCAGAGGCCGACTGCGAAAGACTTCAC
ATATATCGTCTCCTTTTTGTTTAGGCAGGTGGATGCGAATTTTCGAATCA
CGGGGAAACTGGAGGAGGAGGTGCTCCAGTTTTTCAAGGCGATGCACTAT
CCTTTCCCGATTTCGAAGGCAAGCATGCAGGCAGTGGGGACAATGCATAC
GTGGCCGACGCTCTTGGCGAGTATTACTTGGATGGTGGAGCTGTTGACCT
ATGACGAGGAGGTCCAGAATGACGCGGCGAACCAGGCGGCCTTGGCCGGC
AGCAGTGGCAGCAGCAGCAGCGTGGATGACTTTGAACGGGCGGACGAGAA
GGCGCTCTTCGAGTATCTGGGGAAGGCATACAAGGCGTTCTTGGACGGAG
ACGACGAGTTGTACGAGAAGCTAGAGGATGGCTTGGTAGGGTCGTTTGAG
GGGCGGTGTGGAGAGGTGGAGGCTCAGTGTGCCGTCTTGGAAGCCAACAT
TGCCCAGATGCAGGCAGAGGCGCAGGTGTGCCGAACGCGGCATGCAGCGT
TGCCGGGGTTGCGACAGCGAAGGGCGGACTACGAGAGTGATTTGGGCAAG
TTTCGCACGTTGATTGAACAGCTGACTGCGCACCGGGAGGGGTTGGCCGC
TAAGGTGGAGAAGAGGGAGGGGGAGCTGGCGGAGCTGTACCGTTCGCTGG
AAATGGTGCGTACCGAGACGGCCGAGCTCAAGCAGGTGGTGGCAGGGCAG
GAATTAAGCCCGGAGGACGTGGCACGGATGCAGCAGGAACGGGTACGGCT
GGACGAGGCATTGGGAAAGGCGAGGGAGCACAAGGGGAAAATGCAAAAGG
CCCTGTGGGAGGCCGAGATGGAGTTGAGTCGCGCGGTGGTGGATTTGGAA
ACGGCCGCGCAGACCTTCAATGGCAAAGCGGCAAGTTTACAATTGATCCC
CATCACGGCAAGGAATAGCAATGGGATCCAGTATGAGATGAGTGTGAGCA
AAGGAGCGGTCTCGGCCTCCGCGGAGCCCCAGGATTTGATTGGCTTGGAC
ATTAAGGGGGTGATTCGCCCGAGCCTCGGTCAGATTAAAAATGTCATTCT
GGACAAAGTGCACGAGGCGCGTACTTCGGTGTTGAAAATGCTTGATGAGG
AGGCCAAGAGCGAGGAGGAGGTGGCGGAGGCCGTGGCTGCGTTCGAGGTG
ATGGAGGGGAAAGTGAAGAAACAGGAGGAGGGGTACAGGTCGGAGAAGGC
GCGTATGGAGGCGAACATGGCAGAGAAGTCAGCAGACGTTGAAAGGGTGG
AGGAGCAAGTCCTTCACCTCCGCAGCCAGGTGGTGGTGGAGCTCGAGAGC
CGGGCCGCGCGGAACCAGCAACGACTGACCCAGCTGCAGGCCGAGCTGGC
GCTGGAGAGAGAGGAACACGAGGGGGTCAGCAAGGTGATCCTAGAATGCA
TTATGGGCGCATTGCACGCTTTGGCGGATCACAAAGAGGAGGTGAAGCGA
CGCTTGGAGGAGTTCCACGAGCAGTGTCTGCAAAGGCGCGACCACCTCTT
GAGCCTCCCCGAGCCCTTCTCCCCCCAGTGAATAATAAGCCTTACTCGTC
AAAGAGAAGAGTGACAGATACAAAGGAGGGGAAAACAGGGAGTACGGCCC
CTGAGTACGGTGTAATTAATTAGTTCATTTTGCCACGACGAGACTGTGAG
TGCCATTTCCATGCCTCCGTCCATACTCATCATTTTTACTGTATCCGAAC
CGAGAGGAGAAAGGGAAGGAGGGAAGGATAGGCATACGTGAGGACGGATA
GCAGGGAAGCGTGAAGGGACAGAAGCAGCTCTCTTAGCCCCATCATATGT
GTGTGTTGTGCGCATTAAAGAGTGTGTACGTATTTCGGTTTTTCGATTTC
CTTCGTCTCTGCCAACGGTGGACAACGACGCGACGCAGTGGTATTGCCAC
GGCTAGCGGCACTACGAACAAGAATAATAAAGAAAGTGAGACAGAGAGAA
AGAGAAACATGACGCGATGCGAAACATTCATTGCTTGTCTATGGGGTAGG
GAAGGGGCTCGGACCAAAACAAGACAGAAAAACAGAACAAGACAGACTGG
CTACACCATACATACGCTGAAGCGAGAAGAGAAGGAGCCGAGCGATCGAT
TAATGCTAGATACTTAAGGCATGAAGAAAAATAACACAACTACAATCACG

protein sequence of NO17G02070.1

>NO17G02070.1-protein ID=NO17G02070.1-protein|Name=NO17G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=658bp
MALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKQAKPQGGR
LSLHPSSSSTASSGTSFSSTTASSMLRNSNGPPRKSSTGLSRKSTAYGSH
ARQDPRPNTDKSYIQTSIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYI
VSFLFRQVDANFRITGKLEEEVLQFFKAMHYPFPISKASMQAVGTMHTWP
TLLASITWMVELLTYDEEVQNDAANQAALAGSSGSSSSVDDFERADEKAL
FEYLGKAYKAFLDGDDELYEKLEDGLVGSFEGRCGEVEAQCAVLEANIAQ
MQAEAQVCRTRHAALPGLRQRRADYESDLGKFRTLIEQLTAHREGLAAKV
EKREGELAELYRSLEMVRTETAELKQVVAGQELSPEDVARMQQERVRLDE
ALGKAREHKGKMQKALWEAEMELSRAVVDLETAAQTFNGKAASLQLIPIT
ARNSNGIQYEMSVSKGAVSASAEPQDLIGLDIKGVIRPSLGQIKNVILDK
VHEARTSVLKMLDEEAKSEEEVAEAVAAFEVMEGKVKKQEEGYRSEKARM
EANMAEKSADVERVEEQVLHLRSQVVVELESRAARNQQRLTQLQAELALE
REEHEGVSKVILECIMGALHALADHKEEVKRRLEEFHEQCLQRRDHLLSL
PEPFSPQ*

mRNA from alignment at chr17:595369..599200-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G02070.1 ID=NO17G02070.1|Name=NO17G02070.1|organism=Nannochloropsis oceanica|type=mRNA|length=3832bp|location=Sequence derived from alignment at chr17:595369..599200- (Nannochloropsis oceanica)
CAGAGAAGACATGCTCCACTGACAAGAACAAGGCGAAGACAAGACTGGGG
TAAGGAAAGTAGGGCATGGCCAGCCGTTTTCGCGCGCTTGCTCTCGTATG
AAAAAAAGTTAACGAGGCTCCTCCTCCTCGGCTTCCCTCTGTGTGCGTCG
CACCACTATCCTCGTGTCTGCGACTCTACCAGTGGCATAGAGAATATTTC
CTGTCTGTTGCATGGAAGTTGTGGTGGGAACAGTGGTTCGGTCGGGTAGA
AGAAGACGGACAGACGAGGCAAGAGCAGCACCATGGCCCCTGGTCGTTCG
CTCCCTGATCTTATGCCCATGCCCCCCTCATGCTCTCCAAGCGACCATAT
GCGCTCACACAAACACATCCTCCATGTCTCTGCACACAAGTCAACGCCAT
CCCTCTTTATTTTTGTCTGCCGACAAGGCGACGTCAACGCGCTGGCCTCT
TGCGTGCGTCCGTGGCCTGGCCCGCTCCCCTTCCGCAAAGCGATCGATCT
CCTCATCGACAAACATGCTTTCACTCACCACGCCCAAACCTGTCTCTTCG
TTCGCACACACCACAGCCCTCTGCTTCTCAAGCGATCACAAGTAAGTCAC
CACTTTCATGGCGTTGAGCCGGCGCCGGGGCACCCTGGAGCCGCTCTCCT
CCAGCGGTTTCAACCAGCGACAGAGCATGGGCATGCCCAGCCGTGGCGTC
TCGCGCACCTCCTTGGGACCCAACTTTGACAAGCAAGCCAAGCCACAGGT
ACATCTGAAAACGAGGATATAGACGTTGAGAGTTGTGTGCGCATGTGACT
CAGCAGCGGGAGGGAGATCGTTTCTGGGGAGCGGGGCGCATGGCTAGATC
TTCCTTGTCTTCCGCGGCCGCGCCACAGAACGACCAGCCACTTTCCTCAC
CTGTATGTGAGCATATGTTATCCCCTTACACAGCAAGGGTGCACATCCCT
CAATCTAAATCAAGCTGAGCGGAGATGCCACTTCCATTTTCTAAACACCA
CTCTTTCCCTCCCTCTTCCCCGCTACATCGACTCGCTTACAGGGCGGCCG
TCTCTCTCTGCACCCCTCCTCCTCGTCCACCGCCTCCAGCGGCACTTCCT
TCTCCTCCACCACCGCCTCCTCCATGCTCCGCAACAGCAATGGCCCCCCC
CGGAAGTCGTCAACGGGGCTCAGTCGCAAAAGCACTGCCTACGGCTCTCA
TGCCCGGCAAGACCCCAGACCCAACACGGACAAGAGCTACATCCAAACAA
GCATTCGGGGGCTGATCAACTACCTGACGGATCACAACTATGACCAGCCG
TTCAGTGCTAAGATATTGCAGAGGCCGACTGCGAAAGACTTCACATATAT
CGTCTCCTTTTTGTTTAGGCAGGTGGATGCGAATTTTCGAATCACGGGGA
AACTGGAGGAGGAGGTGCTCCAGTTTTTCAAGGCGATGCACTATCCTTTC
CCGATTTCGAAGGCAAGCATGCAGGCAGTGGGGACAATGCATACGTGGCC
GACGCTCTTGGCGAGTATTACTTGGATGGTGGAGCTGTTGACCTATGACG
AGGAGGTCCAGAATGACGCGGCGAACCAGGCGGCCTTGGCCGGCAGCAGT
GGCAGCAGCAGCAGCGTGGATGACTTTGAACGGGCGGACGAGAAGGCGCT
CTTCGAGTATCTGGGGAAGGCATACAAGGCGTTCTTGGACGGAGACGACG
AGTTGTACGAGAAGCTAGAGGATGGCTTGGTAGGGTCGTTTGAGGGGCGG
TGTGGAGAGGTGGAGGCTCAGTGTGCCGTCTTGGAAGCCAACATTGCCCA
GATGCAGGCAGAGGCGCAGGTGTGCCGAACGCGGCATGCAGCGTTGCCGG
GGTTGCGACAGCGAAGGGCGGACTACGAGAGTGATTTGGGCAAGTTTCGC
ACGTTGATTGAACAGCTGACTGCGCACCGGGAGGGGTTGGCCGCTAAGGT
GGAGAAGAGGGAGGGGGAGCTGGCGGAGCTGTACCGTTCGCTGGAAATGG
TGCGTACCGAGACGGCCGAGCTCAAGCAGGTGGTGGCAGGGCAGGAATTA
AGCCCGGAGGACGTGGCACGGATGCAGCAGGAACGGGTACGGCTGGACGA
GGCATTGGGAAAGGCGAGGGAGCACAAGGGGAAAATGCAAAAGGCCCTGT
GGGAGGCCGAGATGGAGTTGAGTCGCGCGGTGGTGGATTTGGAAACGGCC
GCGCAGACCTTCAATGGCAAAGCGGCAAGTTTACAATTGATCCCCATCAC
GGCAAGGAATAGCAATGGGATCCAGTATGAGATGAGTGTGAGCAAAGGAG
CGGTCTCGGCCTCCGCGGAGCCCCAGGATTTGATTGGCTTGGACATTAAG
GGGGTGATTCGCCCGAGCCTCGGTCAGATTAAAAATGTCATTCTGGACAA
AGTGCACGAGGCGCGTACTTCGGTGTTGAAAATGCTTGATGAGGAGGCCA
AGAGCGAGGAGGAGGTGGCGGAGGCCGTGGCTGCGTTCGAGGTGATGGAG
GGGAAAGTGAAGAAACAGGAGGAGGGGTACAGGTCGGAGAAGGCGCGTAT
GGAGGCGAACATGGCAGAGAAGGTAAGGGGAGCGAGGGAAGGAGCGAGGC
AGGGGTGTAGAGTCGGTACCATGTCAAGTCGTGTCAGCCTTCATATTTGA
GTTGTTGCTTTTCAAGCGCATGCTTTACCACTCTCTCACCATCCACTCTC
CCTTTTCCACTTTTCTCTTTCGCCCCCTTTTGCAGTCAGCAGACGTTGAA
AGGGTGGAGGAGCAAGTCCTTCACCTCCGCAGCCAGGTGGTGGTGGAGCT
CGAGAGCCGGGCCGCGCGGAACCAGCAACGACTGACCCAGCTGCAGGCCG
AGCTGGCGCTGGAGAGAGAGGAACACGAGGGGGTCAGCAAGGTGATCCTA
GAATGCATTATGGGCGCATTGCACGCTTTGGCGGATCACAAAGAGGAGGT
GAAGCGACGCTTGGGTACGTGCGGGGGTGGGAGGGGAAGAGGAGAGGGAG
AGAGGGAGGGAGGGAGGAGCACGTACAAGCGGACGTGAAAAAAGGGTTGG
TCCAGTCAATGGGAATCACGAGCTACCATGATTCCGTACTTATGCTTCCT
CCACTCTATCCACACATGACGACCTTTGTATTTGCACAGAGGAGTTCCAC
GAGCAGTGTCTGCAAAGGCGCGACCACCTCTTGAGCCTCCCCGAGCCCTT
CTCCCCCCAGTGAATAATAAGCCTTACTCGTCAAAGAGAAGAGTGACAGA
TACAAAGGAGGGGAAAACAGGGAGTACGGCCCCTGAGTACGGTGTAATTA
ATTAGTTCATTTTGCCACGACGAGACTGTGAGTGCCATTTCCATGCCTCC
GTCCATACTCATCATTTTTACTGTATCCGAACCGAGAGGAGAAAGGGAAG
GAGGGAAGGATAGGCATACGTGAGGACGGATAGCAGGGAAGCGTGAAGGG
ACAGAAGCAGCTCTCTTAGCCCCATCATATGTGTGTGTTGTGCGCATTAA
AGAGTGTGTACGTATTTCGGTTTTTCGATTTCCTTCGTCTCTGCCAACGG
TGGACAACGACGCGACGCAGTGGTATTGCCACGGCTAGCGGCACTACGAA
CAAGAATAATAAAGAAAGTGAGACAGAGAGAAAGAGAAACATGACGCGAT
GCGAAACATTCATTGCTTGTCTATGGGGTAGGGAAGGGGCTCGGACCAAA
ACAAGACAGAAAAACAGAACAAGACAGACTGGCTACACCATACATACGCT
GAAGCGAGAAGAGAAGGAGCCGAGCGATCGATTAATGCTAGATACTTAAG
GCATGAAGAAAAATAACACAACTACAATCACG

Coding sequence (CDS) from alignment at chr17:595369..599200-

>NO17G02070.1 ID=NO17G02070.1|Name=NO17G02070.1|organism=Nannochloropsis oceanica|type=CDS|length=1974bp|location=Sequence derived from alignment at chr17:595369..599200- (Nannochloropsis oceanica)
ATGGCGTTGAGCCGGCGCCGGGGCACCCTGGAGCCGCTCTCCTCCAGCGG
TTTCAACCAGCGACAGAGCATGGGCATGCCCAGCCGTGGCGTCTCGCGCA
CCTCCTTGGGACCCAACTTTGACAAGCAAGCCAAGCCACAGGGCGGCCGT
CTCTCTCTGCACCCCTCCTCCTCGTCCACCGCCTCCAGCGGCACTTCCTT
CTCCTCCACCACCGCCTCCTCCATGCTCCGCAACAGCAATGGCCCCCCCC
GGAAGTCGTCAACGGGGCTCAGTCGCAAAAGCACTGCCTACGGCTCTCAT
GCCCGGCAAGACCCCAGACCCAACACGGACAAGAGCTACATCCAAACAAG
CATTCGGGGGCTGATCAACTACCTGACGGATCACAACTATGACCAGCCGT
TCAGTGCTAAGATATTGCAGAGGCCGACTGCGAAAGACTTCACATATATC
GTCTCCTTTTTGTTTAGGCAGGTGGATGCGAATTTTCGAATCACGGGGAA
ACTGGAGGAGGAGGTGCTCCAGTTTTTCAAGGCGATGCACTATCCTTTCC
CGATTTCGAAGGCAAGCATGCAGGCAGTGGGGACAATGCATACGTGGCCG
ACGCTCTTGGCGAGTATTACTTGGATGGTGGAGCTGTTGACCTATGACGA
GGAGGTCCAGAATGACGCGGCGAACCAGGCGGCCTTGGCCGGCAGCAGTG
GCAGCAGCAGCAGCGTGGATGACTTTGAACGGGCGGACGAGAAGGCGCTC
TTCGAGTATCTGGGGAAGGCATACAAGGCGTTCTTGGACGGAGACGACGA
GTTGTACGAGAAGCTAGAGGATGGCTTGGTAGGGTCGTTTGAGGGGCGGT
GTGGAGAGGTGGAGGCTCAGTGTGCCGTCTTGGAAGCCAACATTGCCCAG
ATGCAGGCAGAGGCGCAGGTGTGCCGAACGCGGCATGCAGCGTTGCCGGG
GTTGCGACAGCGAAGGGCGGACTACGAGAGTGATTTGGGCAAGTTTCGCA
CGTTGATTGAACAGCTGACTGCGCACCGGGAGGGGTTGGCCGCTAAGGTG
GAGAAGAGGGAGGGGGAGCTGGCGGAGCTGTACCGTTCGCTGGAAATGGT
GCGTACCGAGACGGCCGAGCTCAAGCAGGTGGTGGCAGGGCAGGAATTAA
GCCCGGAGGACGTGGCACGGATGCAGCAGGAACGGGTACGGCTGGACGAG
GCATTGGGAAAGGCGAGGGAGCACAAGGGGAAAATGCAAAAGGCCCTGTG
GGAGGCCGAGATGGAGTTGAGTCGCGCGGTGGTGGATTTGGAAACGGCCG
CGCAGACCTTCAATGGCAAAGCGGCAAGTTTACAATTGATCCCCATCACG
GCAAGGAATAGCAATGGGATCCAGTATGAGATGAGTGTGAGCAAAGGAGC
GGTCTCGGCCTCCGCGGAGCCCCAGGATTTGATTGGCTTGGACATTAAGG
GGGTGATTCGCCCGAGCCTCGGTCAGATTAAAAATGTCATTCTGGACAAA
GTGCACGAGGCGCGTACTTCGGTGTTGAAAATGCTTGATGAGGAGGCCAA
GAGCGAGGAGGAGGTGGCGGAGGCCGTGGCTGCGTTCGAGGTGATGGAGG
GGAAAGTGAAGAAACAGGAGGAGGGGTACAGGTCGGAGAAGGCGCGTATG
GAGGCGAACATGGCAGAGAAGTCAGCAGACGTTGAAAGGGTGGAGGAGCA
AGTCCTTCACCTCCGCAGCCAGGTGGTGGTGGAGCTCGAGAGCCGGGCCG
CGCGGAACCAGCAACGACTGACCCAGCTGCAGGCCGAGCTGGCGCTGGAG
AGAGAGGAACACGAGGGGGTCAGCAAGGTGATCCTAGAATGCATTATGGG
CGCATTGCACGCTTTGGCGGATCACAAAGAGGAGGTGAAGCGACGCTTGG
AGGAGTTCCACGAGCAGTGTCTGCAAAGGCGCGACCACCTCTTGAGCCTC
CCCGAGCCCTTCTCCCCCCAGTGA

Synonyms

Publications