NO17G01940.1, NO17G01940.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01940.1
Unique Name	NO17G01940.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4054
Alignment location	chr17:554735..559127 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:554735..559127 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G01940.1 vs.
Match: XP_005852710.1 (DnaJ subfamily A member 2-like protein, partial [Nannochloropsis gaditana CCMP526]; EKU23119.1 DnaJ subfamily A member 2-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 707.2 bits (1824), Expect = 3.000e-200
Identity = 347/402 (86.32%), Postives = 373/402 (92.79%), Query Frame = 0

Query:   22 RGRGGG-EVDNEEFYKILGVAKDANEGEIKKAYRKLALKNHPDKGGDPEKFKEITMAYEVLSDPDKRSRYDQYGKDGLEEGSTHNPEDIFSMFFGGGGRRGPSGPKKGEDIRHPLKVTLDDLYNGKKCHLAINRDKLCGACEGVGGKRGAERQCDGCNGRGVTIQLRQIGPGMVQQSQMPCSACRGAGKTMSEKDKCRECRGRKVVKERKLLEVHIEKGMKHNQKIVFHGEADEAPGTIPGDIIFLVQEKDHEVFTRKNNDLIMEKTLSLAEALVGYCFLIKHLDGRVIKCESAKPGDVVKPGDIRMIPEEGMPLHGSPFTKGRLFVVFKVEFPVPGTFNAAQLKALEAVLPPRDMPKLTGEEEEVEMIAVEASQIGAGRDDGSGMEEDDDGRPQRVQCQNM 423
            RGRGGG EVDN+EFYKILGV  DANEG+IKKAYRKLALKNHPDKGGDPEKFKEITMAYEVLSDP+KR RYDQYGKDGLEEGS HNPEDIFSMFF GGGRRGPSGP+KGEDIRHPLKVTLDDLYNGKKCHLAINRDKLCGACEG+GGK+GAER C  CNGRGVT+QLRQIGPGMVQQSQMPCS CRGAGKTMSEKDKCRECRGRKVVKERKLLEVHIEKGMKHNQKI FHGEADEAPGTIPGDIIFLVQEKDHEVFTRKNNDL MEKTL+L EALVGY FL  HLDGRVIKC + +PG+++KPGDIRM+  EGMP+HGSPFTKGRLF+VFKVEFP  G F+AAQLKALEAVLP R +PK+TGEEEEV+++ V+A+QIGAG DDGS M+ED+DGR QRVQCQNM
Sbjct:    1 RGRGGGGEVDNQEFYKILGVNTDANEGDIKKAYRKLALKNHPDKGGDPEKFKEITMAYEVLSDPEKRKRYDQYGKDGLEEGSMHNPEDIFSMFF-GGGRRGPSGPRKGEDIRHPLKVTLDDLYNGKKCHLAINRDKLCGACEGLGGKKGAERSCSTCNGRGVTVQLRQIGPGMVQQSQMPCSVCRGAGKTMSEKDKCRECRGRKVVKERKLLEVHIEKGMKHNQKITFHGEADEAPGTIPGDIIFLVQEKDHEVFTRKNNDLFMEKTLTLTEALVGYDFLFTHLDGRVIKCGN-QPGEIIKPGDIRMVQGEGMPIHGSPFTKGRLFIVFKVEFPPSGAFDAAQLKALEAVLPSRVVPKVTGEEEEVDLVPVDANQIGAG-DDGSAMDEDEDGRGQRVQCQNM 399

The following BLAST results are available for this feature:

BLAST of NO17G01940.1 vs.

BLAST of NO17G01940.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005852710.1	3.000e-200	86.32	DnaJ subfamily A member 2-like protein, partial [N...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G01940	NO17G01940	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01940.1	NO17G01940.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01940.1.cds1	NO17G01940.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01940.1.cds2	NO17G01940.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01940.1.cds3	NO17G01940.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:554735..559127-
coding sequence from alignment at chr17:554735..559127-

mRNA sequence

>NO17G01940.1 ID=NO17G01940.1|Name=NO17G01940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4054bp
CCCCGTCCTCCCATATTCCCCCCACCTTTCCCGTTGCCCTTTCCCCCACA
TTTCCAGCAACCATGCAAGCACCGCGACATTCACCCCCAAAAAAGTAATC
GACATGATCCACGTCCAGAAGAATGTATTCTCCCCCAGAAACTCAAGCTG
ATATGCACACCACAACCACCCCCCTACCGCCGCAAGCCATGCCCCCGCCA
AGATAAGAGGGAGGTAAGGAGGATGGGAAGAAGGGAGAGAGGCTAAAGTG
GGACCCGCAGCGGGAAGGATGGAGAAGTACCAGGCGAAGTATTGAGCGGT
GCAGACTTTGTTGAAGGCGACAAAAATCATGGTTTGGATTGCGATGCAGA
AGGGGAGGTCGCGGGGGCCGAGGAGGAAGGAGGTGTAGGCAAGGAGGAGG
ACTTGAGGGAGAAAGGCTGCTAGACCGAGGAGGTGCCGACTAGTTTCGCT
TTCAAAGTCTAGGTAGATTCCGTAGAACCACGGGGAAAAATTGTGGCGGT
TGTCGGTACGGGTGAGGTGGTAAAGAAGGCCGTGTTGGAGGAAGGACTGG
CCGTAGAGGAGGAAGGCAAGGAGGGTGAGAAAAAGGAAGGTCATTGCACT
TACAACTGTAAAGAGAATGCATTCCTTATCGATAACCATTTTAAGGCGAC
GCCAGAACAGGCGGGTTTTCCTATCTTCCTCATCTACTTCTGCAGGCCGA
GCCGAGGACAAGGCCGCCAGAAAGGAAATGGAGAAGACAATAGGGTACAA
TTTAAAATGCACCGCTGCTCCATGGAAAACTCCCGCCAGGACAGGTCGAT
TTTGTTGGACGAAGAGGACGGTGGCAAGTACTAACGCACTGACCAGAGTA
TCTGCGCTGCCCCGGGTGGAAAAGTTGATGACGAGGGGGTTGAGGAGCCA
GAGGGCAGCGTGGAGAAGGGGATGGGAGTACCAAGAGGCGGCGGTTGGAG
GGACGCTCCCCCGTTTTGCTGCTGATGCAATTAATAATGATGGGTAATGC
GTTGTCCAAGCAGAAATGCGCATGACCAGCAAACCCACAACCAAGTCAGA
CGCGATGAAGAGAACCTTTCCCCAGGCCGGGTGCAGCCACAGGTTGGGCA
GCATAAGACAAGCCAAAAACGGCGTGTATCGATATGTGTCCCGCTCGTAA
GGCGACCCGCCTTGGTATAAAAAACGTGCCGCGTCACTGAAGACCAGGTA
GTCAATGTCTGTGTACTTGACGCTGCTCGACGCCCGGTCCATCCAGGCTC
CCACGCCCAACATCCCCACACGAACTGCCAGGGCCAAAGCAAAAACGAAG
ATGGGCGAAGCATTTGGAGAAGCGGGAGGAGGAGTGTGTGCCATGTCGGT
AGCAGCAGCGCCCTATCCGGGCCTGAGCTATCTGCGTACAGCGTATGATG
GCGGGAAGGGAGCTTGCATCAAATCGAATGGGCGATGACAGCGAGGACTC
GGAGGAATGATGAGAGAGCGTGGATGATGGCGAACACAGACCCAAGACTG
ACGTAGCTGTAGGCTAGCAGGAACGGCCTCAGCGTCGATAGGTACGAGGT
ACGTAACAATCCTGTCTAGACTGAATGTATGAGTCCCTGGATGATCCAGT
TCATCGGGTCAATTTCACCTCCGGCAGATCGCTCGCCTTCATTCATCATC
CATCACCCACTCGCGGTCGGTCGCATCAGCAGGCGGGCAGGCAGCCAAGC
AATACCGAAGCATAGGGTGGAGTCCCGCATTTCTCCTATCACGATGACTC
ACTCCGCCTATCCAGGCCTGTAAACCATAGAGATTTGCCCAATCTAGATG
ATTTCTGAGTGTCTGCGGCGAGCTCAGTTTGCTCGCCTCCATACGCACCA
TCCGCTGCTTTCTACCCCTCTCACAATGCTTCTCGAAAAGACGTTCACTT
CTTTCTGCGGCCACTGCTCATGACCCCAATTTTCCATCCACTCCTCTCCA
CCACTCCATCACAACAGGCCTCCTCTCCAAACACAGGATCGGTAGCACTG
GAGCAGTAGGCAGGCGGCCAAAGACCCAGGATAATAGCAGCAACAGCACC
AGAGGTGACACCAGCAGCAGCTTTGTCATCACATCATGTTTTTCGGCGGT
GACCCTTTCGAGCACTTTGCGGGGGCAGGGAGTGGAGGTGGGGGCATGCG
TGGGAGGGGGGGGGGTGAGGTGGACAACGAGGAATTTTACAAGATCCTGG
GCGTGGCCAAAGACGCAAATGAGGGCGAAATCAAAAAGGCGTACCGAAAG
CTGGCTTTGAAGAACCACCCAGACAAGGGCGGGGACCCGGAGAAGTTTAA
GGAGATAACCATGGCATACGAAGTTTTATCCGACCCGGACAAGCGCTCGC
GTTACGACCAGTACGGGAAAGATGGTCTGGAGGAAGGGAGCACGCACAAC
CCTGAAGACATTTTCTCGATGTTTTTCGGGGGGGGCGGACGACGGGGGCC
TAGCGGGCCTAAAAAGGGGGAGGATATCCGACACCCCTTGAAGGTCACGT
TGGATGACCTGTACAACGGGAAGAAATGCCATCTGGCCATTAACCGCGAT
AAGCTGTGTGGGGCCTGTGAAGGGGTTGGGGGGAAGCGGGGGGCGGAACG
GCAGTGTGACGGGTGCAATGGCCGGGGGGTGACGATCCAATTGAGGCAAA
TCGGCCCGGGGATGGTGCAGCAGAGTCAGATGCCCTGCTCGGCGTGCAGG
GGGGCGGGGAAGACGATGAGTGAGAAGGATAAGTGTCGGGAGTGCCGGGG
GAGGAAGGTTGTGAAGGAGCGGAAGTTGCTGGAGGTGCACATCGAGAAGG
GGATGAAGCATAACCAGAAGATAGTGTTCCACGGGGAGGCGGACGAGGCT
CCCGGCACCATTCCTGGCGACATAATCTTCCTGGTCCAGGAGAAGGACCA
TGAGGTCTTCACGCGGAAGAACAACGATTTAATCATGGAGAAGACGCTGT
CTCTGGCCGAGGCCTTGGTGGGGTACTGCTTCCTCATTAAGCACCTGGAC
GGCCGTGTCATCAAGTGCGAGAGTGCGAAACCCGGAGATGTGGTCAAACC
CGGGGACATCCGCATGATCCCTGAAGAAGGCATGCCTCTTCACGGCTCCC
CCTTCACCAAAGGTCGACTGTTCGTCGTCTTTAAGGTGGAATTCCCGGTC
CCTGGGACGTTCAACGCGGCGCAGCTCAAGGCGTTGGAGGCGGTGTTGCC
CCCGAGGGATATGCCGAAGCTGACGGGTGAGGAGGAGGAGGTGGAGATGA
TTGCAGTAGAGGCGAGTCAGATTGGGGCCGGGAGGGACGATGGTTCTGGG
ATGGAGGAGGATGACGACGGGCGGCCTCAAAGGGTGCAGTGCCAGAACAT
GTAAAAGAGGGAGGGAGGGAAGGAAGGAGCGAGATTTGTGGGAGGGAAGG
AGATAGGCATGTGAACTCAGTTTATGAAGAGAAACGTGGGAAAATTACTA
GGACGGTAGAAGAAAATGGGTAGGAGAAAGAAAGACGCGATAGAGAGAGA
GGGAGAAATCAAAATGTATTCCATTTTTCGGGGTCAGGGATGGCAGCGGC
AGAAAAAGAGGAAGAAGAAGGACATGATGAAGAAGAAAAACGAAGAAGAA
TGGACTTATAAAGCTACTACGAGTGAGTCGACAGAAGGATAACAGAAGGA
TGGCAGTTAAAAAGTGGGAGGGAAGCGAAAGAGGGCAGGACATGCGTAAT
CATCGCAAGGAAGGAGTGAACAGGAAAAAATACATCCAACGATGACGACG
GAGGGAAGCAGCGGCACCAGCAGCAGCAGCACGTATAAGGAGGAGTGCTG
TGAGAGAGGCGAATAATGCTGTCACCAGGTACAGAATGCCATGCAGGAAG
AATTGGTGGAGGGATGGAGGGAGCAAGAGATGGAAATGGCAGGTGGTGAA
GGAGAGTGAAGGATGCGAAGGACAGAGGTGAGAGTGAGAGGTGTTTACCA
AAGAGAGAGAAAGAGCCGGAGAAATGGAACACAAGCAGCCCATTACACAC
AACAAGGACACACCAATCCACGAAGAGCAAGGTCCGCCGATTCTCCCCCC
TTCA

protein sequence of NO17G01940.1

>NO17G01940.1-protein ID=NO17G01940.1-protein|Name=NO17G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MFFGGDPFEHFAGAGSGGGGMRGRGGGEVDNEEFYKILGVAKDANEGEIK
KAYRKLALKNHPDKGGDPEKFKEITMAYEVLSDPDKRSRYDQYGKDGLEE
GSTHNPEDIFSMFFGGGGRRGPSGPKKGEDIRHPLKVTLDDLYNGKKCHL
AINRDKLCGACEGVGGKRGAERQCDGCNGRGVTIQLRQIGPGMVQQSQMP
CSACRGAGKTMSEKDKCRECRGRKVVKERKLLEVHIEKGMKHNQKIVFHG
EADEAPGTIPGDIIFLVQEKDHEVFTRKNNDLIMEKTLSLAEALVGYCFL
IKHLDGRVIKCESAKPGDVVKPGDIRMIPEEGMPLHGSPFTKGRLFVVFK
VEFPVPGTFNAAQLKALEAVLPPRDMPKLTGEEEEVEMIAVEASQIGAGR
DDGSGMEEDDDGRPQRVQCQNM*

mRNA from alignment at chr17:554735..559127-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G01940.1 ID=NO17G01940.1|Name=NO17G01940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4393bp|location=Sequence derived from alignment at chr17:554735..559127- (Nannochloropsis oceanica)
CCCCGTCCTCCCATATTCCCCCCACCTTTCCCGTTGCCCTTTCCCCCACA
TTTCCAGCAACCATGCAAGCACCGCGACATTCACCCCCAAAAAAGTAATC
GACATGATCCACGTCCAGAAGAATGTATTCTCCCCCAGAAACTCAAGCTG
ATATGCACACCACAACCACCCCCCTACCGCCGCAAGCCATGCCCCCGCCA
AGATAAGAGGGAGGTAAGGAGGATGGGAAGAAGGGAGAGAGGCTAAAGTG
GGACCCGCAGCGGGAAGGATGGAGAAGTACCAGGCGAAGTATTGAGCGGT
GCAGACTTTGTTGAAGGCGACAAAAATCATGGTTTGGATTGCGATGCAGA
AGGGGAGGTCGCGGGGGCCGAGGAGGAAGGAGGTGTAGGCAAGGAGGAGG
ACTTGAGGGAGAAAGGCTGCTAGACCGAGGAGGTGCCGACTAGTTTCGCT
TTCAAAGTCTAGGTAGATTCCGTAGAACCACGGGGAAAAATTGTGGCGGT
TGTCGGTACGGGTGAGGTGGTAAAGAAGGCCGTGTTGGAGGAAGGACTGG
CCGTAGAGGAGGAAGGCAAGGAGGGTGAGAAAAAGGAAGGTCATTGCACT
TACAACTGTAAAGAGAATGCATTCCTTATCGATAACCATTTTAAGGCGAC
GCCAGAACAGGCGGGTTTTCCTATCTTCCTCATCTACTTCTGCAGGCCGA
GCCGAGGACAAGGCCGCCAGAAAGGAAATGGAGAAGACAATAGGGTACAA
TTTAAAATGCACCGCTGCTCCATGGAAAACTCCCGCCAGGACAGGTCGAT
TTTGTTGGACGAAGAGGACGGTGGCAAGTACTAACGCACTGACCAGAGTA
TCTGCGCTGCCCCGGGTGGAAAAGTTGATGACGAGGGGGTTGAGGAGCCA
GAGGGCAGCGTGGAGAAGGGGATGGGAGTACCAAGAGGCGGCGGTTGGAG
GGACGCTCCCCCGTTTTGCTGCTGATGCAATTAATAATGATGGGTAATGC
GTTGTCCAAGCAGAAATGCGCATGACCAGCAAACCCACAACCAAGTCAGA
CGCGATGAAGAGAACCTTTCCCCAGGCCGGGTGCAGCCACAGGTTGGGCA
GCATAAGACAAGCCAAAAACGGCGTGTATCGATATGTGTCCCGCTCGTAA
GGCGACCCGCCTTGGTATAAAAAACGTGCCGCGTCACTGAAGACCAGGTA
GTCAATGTCTGTGTACTTGACGCTGCTCGACGCCCGGTCCATCCAGGCTC
CCACGCCCAACATCCCCACACGAACTGCCAGGGCCAAAGCAAAAACGAAG
ATGGGCGAAGCATTTGGAGAAGCGGGAGGAGGAGTGTGTGCCATGTCGGT
AGCAGCAGCGCCCTATCCGGGCCTGAGCTATCTGCGTACAGCGTATGATG
GCGGGAAGGGAGCTTGCATCAAATCGAATGGGCGATGACAGCGAGGACTC
GGAGGAATGATGAGAGAGCGTGGATGATGGCGAACACAGACCCAAGACTG
ACGTAGCTGTAGGCTAGCAGGAACGGCCTCAGCGTCGATAGGTACGAGGT
ACGTAACAATCCTGTCTAGACTGAATGTATGAGTCCCTGGATGATCCAGT
TCATCGGGTCAATTTCACCTCCGGCAGATCGCTCGCCTTCATTCATCATC
CATCACCCACTCGCGGTCGGTCGCATCAGCAGGCGGGCAGGCAGCCAAGC
AATACCGAAGCATAGGGTGGAGTCCCGCATTTCTCCTATCACGATGACTC
ACTCCGCCTATCCAGGCCTGTAAACCATAGAGATTTGCCCAATCTAGATG
ATTTCTGAGTGTCTGCGGCGAGCTCAGTTTGCTCGCCTCCATACGCACCA
TCCGCTGCTTTCTACCCCTCTCACAATGCTTCTCGAAAAGACGTTCACTT
CTTTCTGCGGCCACTGCTCATGACCCCAATTTTCCATCCACTCCTCTCCA
CCACTCCATCACAACAGGCCTCCTCTCCAAACACAGGATCGGTAGCACTG
GAGCAGTAGGCAGGCAAGTTTACATCCGGGGTGTCTCATCTAAGTTAGAA
GTAGAAGGTGCATGTGGGACGTGTGTGAAGGATTTGGGGCCAAAAGTAGG
TTTGTTCTTTTAACTACACAGGACCCCAGTCTCACCTTTCCACCCTTTTC
CTCACTAGACAGGCGGCCAAAGACCCAGGATAATAGCAGCAACAGCACCA
GAGGTGACACCAGCAGCAGCTTTGTCATCACATCATGTTTTTCGTGAGTC
CTTATGCCCTACCATTCTCGGCCATACGTCATCACCCCCCTCCTCACACA
CATCCCACAATCCTCCTTCATATTTTTTAGGGCGGTGACCCTTTCGAGCA
CTTTGCGGGGGCAGGGAGTGGAGGTGGGGGCATGCGTGGGAGGGGGGGGG
GTGAGGTGGACAACGAGGAATTTTACAAGATCCTGGGCGTGGCCAAAGAC
GCAAATGAGGGCGAAATCAAAAAGGCGTACCGAAAGCTGGCTTTGAAGAA
CCACCCAGACAAGGGCGGGGACCCGGAGAAGTTTAAGGAGATAACCATGG
TAAGTCGTGCTTATTAATTTTACTTTTTCATCTTACATGCTGCTAATTGG
TATTTTTTTACCCTTAACCTTAACCCCTTCACCCTCCCTCCTCTCCACCT
AGGCATACGAAGTTTTATCCGACCCGGACAAGCGCTCGCGTTACGACCAG
TACGGGAAAGATGGTCTGGAGGAAGGGAGCACGCACAACCCTGAAGACAT
TTTCTCGATGTTTTTCGGGGGGGGCGGACGACGGGGGCCTAGCGGGCCTA
AAAAGGGGGAGGATATCCGACACCCCTTGAAGGTCACGTTGGATGACCTG
TACAACGGGAAGAAATGCCATCTGGCCATTAACCGCGATAAGCTGTGTGG
GGCCTGTGAAGGGGTTGGGGGGAAGCGGGGGGCGGAACGGCAGTGTGACG
GGTGCAATGGCCGGGGGGTGACGATCCAATTGAGGCAAATCGGCCCGGGG
ATGGTGCAGCAGAGTCAGATGCCCTGCTCGGCGTGCAGGGGGGCGGGGAA
GACGATGAGTGAGAAGGATAAGTGTCGGGAGTGCCGGGGGAGGAAGGTTG
TGAAGGAGCGGAAGTTGCTGGAGGTGCACATCGAGAAGGGGATGAAGCAT
AACCAGAAGATAGTGTTCCACGGGGAGGCGGACGAGGCTCCCGGCACCAT
TCCTGGCGACATAATCTTCCTGGTCCAGGAGAAGGACCATGAGGTCTTCA
CGCGGAAGAACAACGATTTAATCATGGAGAAGACGCTGTCTCTGGCCGAG
GCCTTGGTGGGGTACTGCTTCCTCATTAAGCACCTGGACGGCCGTGTCAT
CAAGTGCGAGAGTGCGAAACCCGGAGATGTGGTCAAACCCGGGGACATCC
GCATGATCCCTGAAGAAGGCATGCCTCTTCACGGCTCCCCCTTCACCAAA
GGTCGACTGTTCGTCGTCTTTAAGGTGGAATTCCCGGTCCCTGGGACGTT
CAACGCGGCGCAGCTCAAGGCGTTGGAGGCGGTGTTGCCCCCGAGGGATA
TGCCGAAGCTGACGGGTGAGGAGGAGGAGGTGGAGATGATTGCAGTAGAG
GCGAGTCAGATTGGGGCCGGGAGGGACGATGGTTCTGGGATGGAGGAGGA
TGACGACGGGCGGCCTCAAAGGGTGCAGTGCCAGAACATGTAAAAGAGGG
AGGGAGGGAAGGAAGGAGCGAGATTTGTGGGAGGGAAGGAGATAGGCATG
TGAACTCAGTTTATGAAGAGAAACGTGGGAAAATTACTAGGACGGTAGAA
GAAAATGGGTAGGAGAAAGAAAGACGCGATAGAGAGAGAGGGAGAAATCA
AAATGTATTCCATTTTTCGGGGTCAGGGATGGCAGCGGCAGAAAAAGAGG
AAGAAGAAGGACATGATGAAGAAGAAAAACGAAGAAGAATGGACTTATAA
AGCTACTACGAGTGAGTCGACAGAAGGATAACAGAAGGATGGCAGTTAAA
AAGTGGGAGGGAAGCGAAAGAGGGCAGGACATGCGTAATCATCGCAAGGA
AGGAGTGAACAGGAAAAAATACATCCAACGATGACGACGGAGGGAAGCAG
CGGCACCAGCAGCAGCAGCACGTATAAGGAGGAGTGCTGTGAGAGAGGCG
AATAATGCTGTCACCAGGTACAGAATGCCATGCAGGAAGAATTGGTGGAG
GGATGGAGGGAGCAAGAGATGGAAATGGCAGGTGGTGAAGGAGAGTGAAG
GATGCGAAGGACAGAGGTGAGAGTGAGAGGTGTTTACCAAAGAGAGAGAA
AGAGCCGGAGAAATGGAACACAAGCAGCCCATTACACACAACAAGGACAC
ACCAATCCACGAAGAGCAAGGTCCGCCGATTCTCCCCCCTTCA

Coding sequence (CDS) from alignment at chr17:554735..559127-

>NO17G01940.1 ID=NO17G01940.1|Name=NO17G01940.1|organism=Nannochloropsis oceanica|type=CDS|length=1269bp|location=Sequence derived from alignment at chr17:554735..559127- (Nannochloropsis oceanica)
ATGTTTTTCGGCGGTGACCCTTTCGAGCACTTTGCGGGGGCAGGGAGTGG
AGGTGGGGGCATGCGTGGGAGGGGGGGGGGTGAGGTGGACAACGAGGAAT
TTTACAAGATCCTGGGCGTGGCCAAAGACGCAAATGAGGGCGAAATCAAA
AAGGCGTACCGAAAGCTGGCTTTGAAGAACCACCCAGACAAGGGCGGGGA
CCCGGAGAAGTTTAAGGAGATAACCATGGCATACGAAGTTTTATCCGACC
CGGACAAGCGCTCGCGTTACGACCAGTACGGGAAAGATGGTCTGGAGGAA
GGGAGCACGCACAACCCTGAAGACATTTTCTCGATGTTTTTCGGGGGGGG
CGGACGACGGGGGCCTAGCGGGCCTAAAAAGGGGGAGGATATCCGACACC
CCTTGAAGGTCACGTTGGATGACCTGTACAACGGGAAGAAATGCCATCTG
GCCATTAACCGCGATAAGCTGTGTGGGGCCTGTGAAGGGGTTGGGGGGAA
GCGGGGGGCGGAACGGCAGTGTGACGGGTGCAATGGCCGGGGGGTGACGA
TCCAATTGAGGCAAATCGGCCCGGGGATGGTGCAGCAGAGTCAGATGCCC
TGCTCGGCGTGCAGGGGGGCGGGGAAGACGATGAGTGAGAAGGATAAGTG
TCGGGAGTGCCGGGGGAGGAAGGTTGTGAAGGAGCGGAAGTTGCTGGAGG
TGCACATCGAGAAGGGGATGAAGCATAACCAGAAGATAGTGTTCCACGGG
GAGGCGGACGAGGCTCCCGGCACCATTCCTGGCGACATAATCTTCCTGGT
CCAGGAGAAGGACCATGAGGTCTTCACGCGGAAGAACAACGATTTAATCA
TGGAGAAGACGCTGTCTCTGGCCGAGGCCTTGGTGGGGTACTGCTTCCTC
ATTAAGCACCTGGACGGCCGTGTCATCAAGTGCGAGAGTGCGAAACCCGG
AGATGTGGTCAAACCCGGGGACATCCGCATGATCCCTGAAGAAGGCATGC
CTCTTCACGGCTCCCCCTTCACCAAAGGTCGACTGTTCGTCGTCTTTAAG
GTGGAATTCCCGGTCCCTGGGACGTTCAACGCGGCGCAGCTCAAGGCGTT
GGAGGCGGTGTTGCCCCCGAGGGATATGCCGAAGCTGACGGGTGAGGAGG
AGGAGGTGGAGATGATTGCAGTAGAGGCGAGTCAGATTGGGGCCGGGAGG
GACGATGGTTCTGGGATGGAGGAGGATGACGACGGGCGGCCTCAAAGGGT
GCAGTGCCAGAACATGTAA

Synonyms

Publications