NO17G01810.1, NO17G01810.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01810.1
Unique Name	NO17G01810.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3731
Alignment location	chr17:519936..523666 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:519936..523666 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G01810.1 vs.
Match: EWM24234.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1274.6 bits (3297), Expect = 0.000e+0
Identity = 703/995 (70.65%), Postives = 792/995 (79.60%), Query Frame = 0

Query:    1 MEIPPQTASVAPLQQEGGHPYTPRRRAMSRIRSRQGSHAGGCGGRGSAADWWRLMLLSSSAATVAAAAATAAFAG-GSASKI---------------------HQPQSRHTWSSPSSSSSSSPSSCLATAMGGWDAGSSSSNSARRLREWESMTGNLDGDNMLLQATAPAKGVAEKQQQQQQHLQQQQQQQQAPFRVDQEDYDDMANAGGQAAASWREAQRLETGPMWRNHRFEVTVRKPLGLYMSEGVKKGGAPTVSEIRSGGNAEKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERSLAQDAGEDSIFSRPVEVFEVELERPVPLEFMQEDAEGGVFVRRVLKSDSPALQLIQPFDRVIAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARLVARGAGRGPVARSPNLSASITPNRGPT-AWAAASLLSPRLTVSEETDGNGMLLMGELRVHAVLSQMAAALRERDADRAVSVYKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTYNAAMDACEKGNKPQEALKLFREELPKRGLAPDIFTYTVLINLHGKRGELAEALALFEEAVARGLQPELPAFTAVIKAAVKKDDMATALALLRRVFDAGLSPDTRLYNTLIWGHTKRLEWDKAVQILRLMEAKGLVPDRLTYSYLLACLVDCHQTDLAQSLWQEMREKDQVKPNLELYSLAVDMFAKNGDTTQAVAIFKEMRRSRVTPNLVTYTSLMEAFVNAGYPMAALSISDEMRRKPGVARDVTSCVWRLKCFVELGDLEAIEGLIREMEECGVPLNVVVYNQYLRGAMRLGQYELALQIFTSMLEKKLPPNLETHQCLLEMPALGTAAAISGVAEGEKERKQMESARDQLVMFYHAALQRLAQHKIRARVTFYVAFMHACLRTDRLDLAAEILALRRANTLQIFQLFKKHQETVEKWEGKIDRELNKRFYLNKNLV 973
            ME PPQT   +P       P   R +A SRIR R  S   GCGG    A+WWRLMLLSSSAAT AAAAATAAF G G A+                        Q Q  ++W + SS+S       LATA GGWD   SS+   R  R W+ M G  D + +LL+A +P +G++EK Q + Q         + P   D+E  D   NAG    +SW EA RLE G + RNHRFEVT++KPLG++MSEG    GAPT+SE+R G NA+KAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVER+LAQDAG+DSI SR VEVFEVELERPVPLE+MQE+AEGGVFVRRVLK+D  AL+ IQP+DRV+AVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARL+ARGAG   V       A + P   P  + AAASLLSP  T      G  MLLMGE RVHAVLSQMA ALR RD D A+S++KLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVT NAAMDACEKG +P+E L+LFREE+P+ GL PDIF+YTVL+N++GKRGELAEALALFEEAVA GL+PELPA+TA+IKAAVKKDDM TALALLRRVFD+GLSPD RLYNTL+WGHTKRLEW KA+QILRLMEAKGLVPDRLTYSYLL+CLVDC+Q ++AQSLW+EMR+K  VKPNLELYSLAVDMFAK GDTTQAV IFKEMRR+RV PNLVTYT+LMEAFV AGYPMAALSISDEMRRKPG+ARDVTSCVWRLKCFVELGDLE IE LI+EM++ G+ LNVVVYNQYLRGAMR G+YELALQI +++ EK+L PNLETHQCLLEMP   T  A+SG+A G+    QME AR+QLVMFYHAAL+ LA+ K+RARV  YVA +HACLRTDRLDLAAE++ALRRANTLQIFQLFKKH+E V +WE KIDREL+ RFY NKNLV
Sbjct:    1 METPPQTLPPSPPGNRHS-PEPSRPQATSRIRRRSHS-ISGCGG-AVIAEWWRLMLLSSSAAT-AAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSR------LATATGGWD---SSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQG--------EGPDARDEEGQDRAGNAG----SSWMEALRLEKGALRRNHRFEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLEWMQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARLIARGAGNPGVG-----VADLVPPLPPRPSMAAASLLSPPSTADLVAKGE-MLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV 964

The following BLAST results are available for this feature:

BLAST of NO17G01810.1 vs.

BLAST of NO17G01810.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24234.1	0.000e+0	70.65	pentatricopeptide repeat-containing protein [Nanno...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G01810	NO17G01810	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01810.1	NO17G01810.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01810.1.cds1	NO17G01810.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:519936..523666-
coding sequence from alignment at chr17:519936..523666-

mRNA sequence

>NO17G01810.1 ID=NO17G01810.1|Name=NO17G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=3731bp
ACTGTCACAAATATGATGCTTCGAGACGCAAAGAGTCAGAACGAGAGTGC
AATGTGACTGAGGTTTCTTGTCGTGATGTCGTTGTTGCGTATGCCTTGTT
TTTCGATAAGCTGGTGCCTACTTCGCGATGTGCGAGTCGCGTTTATCGTC
CAGATCCGTGAAAGGTGACACGCACCGTGTGGAGGCTTCCTCACTCGTTT
ACTGCCTGGCGGCTTGGACTGCGTCCGCCTCTTGACCGCTCCAGTTCATT
GATACATGCTCAAGTCTTCTTCCACATCTCCTAACCCAATTTATTTACTT
TTTGAACAGGACGTAGCGCTTTTCGCACGCACGGTCTGTCAAACCATCTT
TTTAAGTGGAGCCAGGATTCCTCCCTCACACCCGGACCACCTCATCACTT
GGTCTCCCAAGAGAGCAACAACATCTTCTGCACGTCAGGAGGGATGGAAA
TACCACCGCAGACAGCGTCAGTTGCGCCATTACAGCAAGAGGGTGGGCAC
CCCTACACGCCAAGACGACGCGCTATGTCCAGAATAAGAAGTCGTCAGGG
TAGCCATGCAGGAGGGTGCGGAGGAAGAGGGTCGGCGGCAGATTGGTGGC
GCCTCATGCTCTTGTCCTCTTCAGCCGCCACCGTCGCCGCGGCGGCCGCC
ACAGCTGCTTTTGCAGGTGGCAGTGCTAGTAAAATACACCAGCCACAATC
CCGACATACGTGGTCTTCCCCTTCCTCGTCGTCATCATCATCGCCCTCGT
CCTGTCTAGCAACTGCCATGGGAGGATGGGACGCGGGGTCGTCATCGTCT
AATTCAGCACGAAGGCTGCGGGAATGGGAGTCCATGACAGGCAACTTGGA
CGGGGATAATATGCTGCTGCAGGCCACGGCGCCCGCCAAGGGTGTCGCCG
AGAAGCAACAGCAACAACAGCAACATCTGCAACAACAACAACAGCAACAA
CAAGCACCATTCCGCGTCGACCAGGAGGACTACGATGACATGGCGAATGC
AGGGGGTCAAGCTGCAGCCTCATGGAGGGAAGCTCAGCGGCTGGAAACGG
GCCCCATGTGGCGCAATCACCGGTTCGAGGTGACGGTACGCAAGCCCTTG
GGGCTGTATATGTCGGAAGGGGTCAAGAAGGGCGGCGCGCCCACTGTTTC
CGAGATCCGATCGGGCGGCAATGCGGAGAAGGCAGGTTTGAGGGTGGGGG
ACCGCATCGTTGCAGCGTCAGCGACAGTGGGTAATAAGCTGTGGACGAAA
ACGACCTTGGTGGGCGTTGAATCGGCCATCAACTCGCGCTTCCGCTTTTC
AGATGACATCACCTTCTGCGTCGAGCGGTCCCTTGCCCAGGACGCGGGGG
AGGACAGCATCTTTAGCCGGCCGGTGGAGGTGTTCGAAGTGGAGCTGGAG
CGGCCCGTTCCCCTGGAGTTTATGCAGGAAGACGCGGAGGGAGGCGTCTT
TGTACGCCGCGTCCTAAAGTCCGATTCACCGGCCTTGCAACTCATCCAGC
CCTTCGACCGGGTCATTGCGGTCTCGGCCTCTCTGGGGGACCGCATGTGG
CGCACCAACTCCCTAGATGGGGTGCTCTCGGCTCTTTGCACGCGGATCGG
CAGCAAGGTCCGTCTGCAGTTTGAGCGCAGTCCAGAAGTCGCGCGTTTAG
TGGCTCGTGGTGCGGGGCGAGGGCCTGTGGCCCGATCCCCAAACCTCTCA
GCCTCCATCACCCCAAACCGCGGCCCCACTGCCTGGGCAGCCGCTTCTCT
TCTCTCTCCGAGGCTGACCGTATCAGAGGAAACGGATGGAAATGGTATGC
TGCTAATGGGAGAGCTACGAGTGCATGCGGTGCTATCGCAGATGGCAGCA
GCGCTGCGGGAGCGGGATGCCGACCGGGCTGTCTCCGTGTATAAGCTGGC
AGTTGAGCGGGGACTGACGCCAGATGCACACTGCTGCTCATCGCTGATTA
AGGCGTACGGAATGAAAAAGCAGGCAGACAAGGCGTTAGAAGTGGTGCGC
ATGATGCTGGAGCTGGGCGTTGCCCCCGACCTGGTCACCTACAACGCTGC
CATGGACGCCTGCGAGAAAGGCAACAAGCCCCAGGAAGCCCTTAAGCTAT
TCCGCGAGGAGCTGCCCAAGAGAGGCTTGGCACCGGATATATTCACATAC
ACTGTGCTGATCAACCTGCACGGCAAGCGTGGCGAGCTGGCAGAGGCGTT
GGCTTTGTTCGAGGAGGCAGTGGCGCGGGGCCTGCAGCCCGAGTTGCCGG
CCTTCACGGCCGTCATCAAGGCAGCGGTGAAGAAGGACGACATGGCCACA
GCGCTGGCCCTGCTTCGGCGCGTCTTCGACGCGGGTCTCAGTCCTGACAC
TCGCCTGTACAATACTTTGATATGGGGTCACACGAAGCGTCTGGAATGGG
ACAAGGCAGTACAGATCCTGCGCCTGATGGAAGCCAAGGGCCTCGTTCCC
GACCGGCTCACCTACAGCTACCTGCTAGCCTGCCTGGTGGACTGCCACCA
AACCGACCTGGCGCAGTCACTATGGCAAGAGATGAGAGAAAAGGATCAGG
TGAAGCCAAATCTGGAGTTGTACAGTCTGGCAGTGGACATGTTCGCCAAG
AATGGGGATACCACCCAGGCCGTGGCCATCTTCAAGGAGATGCGCCGCAG
CCGCGTGACGCCCAACTTGGTCACCTATACGTCCCTGATGGAGGCTTTTG
TCAACGCGGGGTATCCCATGGCCGCCCTTTCCATTTCTGACGAGATGCGG
CGCAAGCCTGGCGTTGCCCGCGATGTGACAAGCTGCGTCTGGCGTCTCAA
GTGCTTCGTGGAGCTGGGTGACCTGGAGGCTATCGAAGGCCTAATACGGG
AGATGGAGGAATGCGGCGTGCCTCTGAATGTAGTAGTGTATAACCAGTAC
CTGCGTGGTGCCATGCGCCTCGGCCAATACGAGCTGGCCCTTCAGATCTT
CACCAGCATGCTGGAGAAGAAACTGCCGCCCAACCTGGAGACCCACCAGT
GCCTTCTCGAGATGCCTGCACTTGGAACCGCCGCAGCCATCAGTGGCGTG
GCTGAGGGTGAAAAAGAGAGGAAACAGATGGAGAGCGCACGTGATCAGCT
AGTTATGTTCTACCACGCAGCCCTGCAGCGTCTGGCGCAGCACAAGATCC
GCGCAAGGGTCACGTTCTACGTGGCATTTATGCATGCATGCTTGAGGACA
GACAGACTGGATCTGGCAGCCGAGATCCTAGCGTTGAGGCGGGCCAACAC
ACTGCAGATATTCCAGCTCTTCAAGAAACACCAGGAGACGGTGGAAAAGT
GGGAAGGGAAGATTGACCGGGAGTTAAACAAGCGTTTTTATCTAAACAAA
AACCTGGTGTAGGGATGGATGTAAGAAATCAAAGTTACGTAGAGAAAAGT
GTTGCTCCTTTACTTTGGTCCGTCGTAGGGAAAATACAAAAATGCAACAA
AATAGGACGATGAAATTAGGATGGTGAGAAGCGTGTTGAGGGACAGACAA
AAGATAGTTATAGGGGACAAGCAAAGATTCAACATGGAGCAAAATAATAG
CAGTAGAAGCAACACCAACAGCTGGGAACCCCCACTTCCAAATATACATA
CAGCTCATTCGTGTCTGAAGGAAGAAGAAAGGGAGAGGATATTTGGACGA
CCTCGTATGTAAAGATAACAAGGCCAATAACATGATAATCAGATGGAAGA
GTGTACACTTTGGTCAAAGAATCTCTTGAAG

protein sequence of NO17G01810.1

>NO17G01810.1-protein ID=NO17G01810.1-protein|Name=NO17G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=973bp
MEIPPQTASVAPLQQEGGHPYTPRRRAMSRIRSRQGSHAGGCGGRGSAAD
WWRLMLLSSSAATVAAAAATAAFAGGSASKIHQPQSRHTWSSPSSSSSSS
PSSCLATAMGGWDAGSSSSNSARRLREWESMTGNLDGDNMLLQATAPAKG
VAEKQQQQQQHLQQQQQQQQAPFRVDQEDYDDMANAGGQAAASWREAQRL
ETGPMWRNHRFEVTVRKPLGLYMSEGVKKGGAPTVSEIRSGGNAEKAGLR
VGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERSLAQD
AGEDSIFSRPVEVFEVELERPVPLEFMQEDAEGGVFVRRVLKSDSPALQL
IQPFDRVIAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVA
RLVARGAGRGPVARSPNLSASITPNRGPTAWAAASLLSPRLTVSEETDGN
GMLLMGELRVHAVLSQMAAALRERDADRAVSVYKLAVERGLTPDAHCCSS
LIKAYGMKKQADKALEVVRMMLELGVAPDLVTYNAAMDACEKGNKPQEAL
KLFREELPKRGLAPDIFTYTVLINLHGKRGELAEALALFEEAVARGLQPE
LPAFTAVIKAAVKKDDMATALALLRRVFDAGLSPDTRLYNTLIWGHTKRL
EWDKAVQILRLMEAKGLVPDRLTYSYLLACLVDCHQTDLAQSLWQEMREK
DQVKPNLELYSLAVDMFAKNGDTTQAVAIFKEMRRSRVTPNLVTYTSLME
AFVNAGYPMAALSISDEMRRKPGVARDVTSCVWRLKCFVELGDLEAIEGL
IREMEECGVPLNVVVYNQYLRGAMRLGQYELALQIFTSMLEKKLPPNLET
HQCLLEMPALGTAAAISGVAEGEKERKQMESARDQLVMFYHAALQRLAQH
KIRARVTFYVAFMHACLRTDRLDLAAEILALRRANTLQIFQLFKKHQETV
EKWEGKIDRELNKRFYLNKNLV*

mRNA from alignment at chr17:519936..523666-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G01810.1 ID=NO17G01810.1|Name=NO17G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=3731bp|location=Sequence derived from alignment at chr17:519936..523666- (Nannochloropsis oceanica)
ACTGTCACAAATATGATGCTTCGAGACGCAAAGAGTCAGAACGAGAGTGC
AATGTGACTGAGGTTTCTTGTCGTGATGTCGTTGTTGCGTATGCCTTGTT
TTTCGATAAGCTGGTGCCTACTTCGCGATGTGCGAGTCGCGTTTATCGTC
CAGATCCGTGAAAGGTGACACGCACCGTGTGGAGGCTTCCTCACTCGTTT
ACTGCCTGGCGGCTTGGACTGCGTCCGCCTCTTGACCGCTCCAGTTCATT
GATACATGCTCAAGTCTTCTTCCACATCTCCTAACCCAATTTATTTACTT
TTTGAACAGGACGTAGCGCTTTTCGCACGCACGGTCTGTCAAACCATCTT
TTTAAGTGGAGCCAGGATTCCTCCCTCACACCCGGACCACCTCATCACTT
GGTCTCCCAAGAGAGCAACAACATCTTCTGCACGTCAGGAGGGATGGAAA
TACCACCGCAGACAGCGTCAGTTGCGCCATTACAGCAAGAGGGTGGGCAC
CCCTACACGCCAAGACGACGCGCTATGTCCAGAATAAGAAGTCGTCAGGG
TAGCCATGCAGGAGGGTGCGGAGGAAGAGGGTCGGCGGCAGATTGGTGGC
GCCTCATGCTCTTGTCCTCTTCAGCCGCCACCGTCGCCGCGGCGGCCGCC
ACAGCTGCTTTTGCAGGTGGCAGTGCTAGTAAAATACACCAGCCACAATC
CCGACATACGTGGTCTTCCCCTTCCTCGTCGTCATCATCATCGCCCTCGT
CCTGTCTAGCAACTGCCATGGGAGGATGGGACGCGGGGTCGTCATCGTCT
AATTCAGCACGAAGGCTGCGGGAATGGGAGTCCATGACAGGCAACTTGGA
CGGGGATAATATGCTGCTGCAGGCCACGGCGCCCGCCAAGGGTGTCGCCG
AGAAGCAACAGCAACAACAGCAACATCTGCAACAACAACAACAGCAACAA
CAAGCACCATTCCGCGTCGACCAGGAGGACTACGATGACATGGCGAATGC
AGGGGGTCAAGCTGCAGCCTCATGGAGGGAAGCTCAGCGGCTGGAAACGG
GCCCCATGTGGCGCAATCACCGGTTCGAGGTGACGGTACGCAAGCCCTTG
GGGCTGTATATGTCGGAAGGGGTCAAGAAGGGCGGCGCGCCCACTGTTTC
CGAGATCCGATCGGGCGGCAATGCGGAGAAGGCAGGTTTGAGGGTGGGGG
ACCGCATCGTTGCAGCGTCAGCGACAGTGGGTAATAAGCTGTGGACGAAA
ACGACCTTGGTGGGCGTTGAATCGGCCATCAACTCGCGCTTCCGCTTTTC
AGATGACATCACCTTCTGCGTCGAGCGGTCCCTTGCCCAGGACGCGGGGG
AGGACAGCATCTTTAGCCGGCCGGTGGAGGTGTTCGAAGTGGAGCTGGAG
CGGCCCGTTCCCCTGGAGTTTATGCAGGAAGACGCGGAGGGAGGCGTCTT
TGTACGCCGCGTCCTAAAGTCCGATTCACCGGCCTTGCAACTCATCCAGC
CCTTCGACCGGGTCATTGCGGTCTCGGCCTCTCTGGGGGACCGCATGTGG
CGCACCAACTCCCTAGATGGGGTGCTCTCGGCTCTTTGCACGCGGATCGG
CAGCAAGGTCCGTCTGCAGTTTGAGCGCAGTCCAGAAGTCGCGCGTTTAG
TGGCTCGTGGTGCGGGGCGAGGGCCTGTGGCCCGATCCCCAAACCTCTCA
GCCTCCATCACCCCAAACCGCGGCCCCACTGCCTGGGCAGCCGCTTCTCT
TCTCTCTCCGAGGCTGACCGTATCAGAGGAAACGGATGGAAATGGTATGC
TGCTAATGGGAGAGCTACGAGTGCATGCGGTGCTATCGCAGATGGCAGCA
GCGCTGCGGGAGCGGGATGCCGACCGGGCTGTCTCCGTGTATAAGCTGGC
AGTTGAGCGGGGACTGACGCCAGATGCACACTGCTGCTCATCGCTGATTA
AGGCGTACGGAATGAAAAAGCAGGCAGACAAGGCGTTAGAAGTGGTGCGC
ATGATGCTGGAGCTGGGCGTTGCCCCCGACCTGGTCACCTACAACGCTGC
CATGGACGCCTGCGAGAAAGGCAACAAGCCCCAGGAAGCCCTTAAGCTAT
TCCGCGAGGAGCTGCCCAAGAGAGGCTTGGCACCGGATATATTCACATAC
ACTGTGCTGATCAACCTGCACGGCAAGCGTGGCGAGCTGGCAGAGGCGTT
GGCTTTGTTCGAGGAGGCAGTGGCGCGGGGCCTGCAGCCCGAGTTGCCGG
CCTTCACGGCCGTCATCAAGGCAGCGGTGAAGAAGGACGACATGGCCACA
GCGCTGGCCCTGCTTCGGCGCGTCTTCGACGCGGGTCTCAGTCCTGACAC
TCGCCTGTACAATACTTTGATATGGGGTCACACGAAGCGTCTGGAATGGG
ACAAGGCAGTACAGATCCTGCGCCTGATGGAAGCCAAGGGCCTCGTTCCC
GACCGGCTCACCTACAGCTACCTGCTAGCCTGCCTGGTGGACTGCCACCA
AACCGACCTGGCGCAGTCACTATGGCAAGAGATGAGAGAAAAGGATCAGG
TGAAGCCAAATCTGGAGTTGTACAGTCTGGCAGTGGACATGTTCGCCAAG
AATGGGGATACCACCCAGGCCGTGGCCATCTTCAAGGAGATGCGCCGCAG
CCGCGTGACGCCCAACTTGGTCACCTATACGTCCCTGATGGAGGCTTTTG
TCAACGCGGGGTATCCCATGGCCGCCCTTTCCATTTCTGACGAGATGCGG
CGCAAGCCTGGCGTTGCCCGCGATGTGACAAGCTGCGTCTGGCGTCTCAA
GTGCTTCGTGGAGCTGGGTGACCTGGAGGCTATCGAAGGCCTAATACGGG
AGATGGAGGAATGCGGCGTGCCTCTGAATGTAGTAGTGTATAACCAGTAC
CTGCGTGGTGCCATGCGCCTCGGCCAATACGAGCTGGCCCTTCAGATCTT
CACCAGCATGCTGGAGAAGAAACTGCCGCCCAACCTGGAGACCCACCAGT
GCCTTCTCGAGATGCCTGCACTTGGAACCGCCGCAGCCATCAGTGGCGTG
GCTGAGGGTGAAAAAGAGAGGAAACAGATGGAGAGCGCACGTGATCAGCT
AGTTATGTTCTACCACGCAGCCCTGCAGCGTCTGGCGCAGCACAAGATCC
GCGCAAGGGTCACGTTCTACGTGGCATTTATGCATGCATGCTTGAGGACA
GACAGACTGGATCTGGCAGCCGAGATCCTAGCGTTGAGGCGGGCCAACAC
ACTGCAGATATTCCAGCTCTTCAAGAAACACCAGGAGACGGTGGAAAAGT
GGGAAGGGAAGATTGACCGGGAGTTAAACAAGCGTTTTTATCTAAACAAA
AACCTGGTGTAGGGATGGATGTAAGAAATCAAAGTTACGTAGAGAAAAGT
GTTGCTCCTTTACTTTGGTCCGTCGTAGGGAAAATACAAAAATGCAACAA
AATAGGACGATGAAATTAGGATGGTGAGAAGCGTGTTGAGGGACAGACAA
AAGATAGTTATAGGGGACAAGCAAAGATTCAACATGGAGCAAAATAATAG
CAGTAGAAGCAACACCAACAGCTGGGAACCCCCACTTCCAAATATACATA
CAGCTCATTCGTGTCTGAAGGAAGAAGAAAGGGAGAGGATATTTGGACGA
CCTCGTATGTAAAGATAACAAGGCCAATAACATGATAATCAGATGGAAGA
GTGTACACTTTGGTCAAAGAATCTCTTGAAG

Coding sequence (CDS) from alignment at chr17:519936..523666-

>NO17G01810.1 ID=NO17G01810.1|Name=NO17G01810.1|organism=Nannochloropsis oceanica|type=CDS|length=2919bp|location=Sequence derived from alignment at chr17:519936..523666- (Nannochloropsis oceanica)
ATGGAAATACCACCGCAGACAGCGTCAGTTGCGCCATTACAGCAAGAGGG
TGGGCACCCCTACACGCCAAGACGACGCGCTATGTCCAGAATAAGAAGTC
GTCAGGGTAGCCATGCAGGAGGGTGCGGAGGAAGAGGGTCGGCGGCAGAT
TGGTGGCGCCTCATGCTCTTGTCCTCTTCAGCCGCCACCGTCGCCGCGGC
GGCCGCCACAGCTGCTTTTGCAGGTGGCAGTGCTAGTAAAATACACCAGC
CACAATCCCGACATACGTGGTCTTCCCCTTCCTCGTCGTCATCATCATCG
CCCTCGTCCTGTCTAGCAACTGCCATGGGAGGATGGGACGCGGGGTCGTC
ATCGTCTAATTCAGCACGAAGGCTGCGGGAATGGGAGTCCATGACAGGCA
ACTTGGACGGGGATAATATGCTGCTGCAGGCCACGGCGCCCGCCAAGGGT
GTCGCCGAGAAGCAACAGCAACAACAGCAACATCTGCAACAACAACAACA
GCAACAACAAGCACCATTCCGCGTCGACCAGGAGGACTACGATGACATGG
CGAATGCAGGGGGTCAAGCTGCAGCCTCATGGAGGGAAGCTCAGCGGCTG
GAAACGGGCCCCATGTGGCGCAATCACCGGTTCGAGGTGACGGTACGCAA
GCCCTTGGGGCTGTATATGTCGGAAGGGGTCAAGAAGGGCGGCGCGCCCA
CTGTTTCCGAGATCCGATCGGGCGGCAATGCGGAGAAGGCAGGTTTGAGG
GTGGGGGACCGCATCGTTGCAGCGTCAGCGACAGTGGGTAATAAGCTGTG
GACGAAAACGACCTTGGTGGGCGTTGAATCGGCCATCAACTCGCGCTTCC
GCTTTTCAGATGACATCACCTTCTGCGTCGAGCGGTCCCTTGCCCAGGAC
GCGGGGGAGGACAGCATCTTTAGCCGGCCGGTGGAGGTGTTCGAAGTGGA
GCTGGAGCGGCCCGTTCCCCTGGAGTTTATGCAGGAAGACGCGGAGGGAG
GCGTCTTTGTACGCCGCGTCCTAAAGTCCGATTCACCGGCCTTGCAACTC
ATCCAGCCCTTCGACCGGGTCATTGCGGTCTCGGCCTCTCTGGGGGACCG
CATGTGGCGCACCAACTCCCTAGATGGGGTGCTCTCGGCTCTTTGCACGC
GGATCGGCAGCAAGGTCCGTCTGCAGTTTGAGCGCAGTCCAGAAGTCGCG
CGTTTAGTGGCTCGTGGTGCGGGGCGAGGGCCTGTGGCCCGATCCCCAAA
CCTCTCAGCCTCCATCACCCCAAACCGCGGCCCCACTGCCTGGGCAGCCG
CTTCTCTTCTCTCTCCGAGGCTGACCGTATCAGAGGAAACGGATGGAAAT
GGTATGCTGCTAATGGGAGAGCTACGAGTGCATGCGGTGCTATCGCAGAT
GGCAGCAGCGCTGCGGGAGCGGGATGCCGACCGGGCTGTCTCCGTGTATA
AGCTGGCAGTTGAGCGGGGACTGACGCCAGATGCACACTGCTGCTCATCG
CTGATTAAGGCGTACGGAATGAAAAAGCAGGCAGACAAGGCGTTAGAAGT
GGTGCGCATGATGCTGGAGCTGGGCGTTGCCCCCGACCTGGTCACCTACA
ACGCTGCCATGGACGCCTGCGAGAAAGGCAACAAGCCCCAGGAAGCCCTT
AAGCTATTCCGCGAGGAGCTGCCCAAGAGAGGCTTGGCACCGGATATATT
CACATACACTGTGCTGATCAACCTGCACGGCAAGCGTGGCGAGCTGGCAG
AGGCGTTGGCTTTGTTCGAGGAGGCAGTGGCGCGGGGCCTGCAGCCCGAG
TTGCCGGCCTTCACGGCCGTCATCAAGGCAGCGGTGAAGAAGGACGACAT
GGCCACAGCGCTGGCCCTGCTTCGGCGCGTCTTCGACGCGGGTCTCAGTC
CTGACACTCGCCTGTACAATACTTTGATATGGGGTCACACGAAGCGTCTG
GAATGGGACAAGGCAGTACAGATCCTGCGCCTGATGGAAGCCAAGGGCCT
CGTTCCCGACCGGCTCACCTACAGCTACCTGCTAGCCTGCCTGGTGGACT
GCCACCAAACCGACCTGGCGCAGTCACTATGGCAAGAGATGAGAGAAAAG
GATCAGGTGAAGCCAAATCTGGAGTTGTACAGTCTGGCAGTGGACATGTT
CGCCAAGAATGGGGATACCACCCAGGCCGTGGCCATCTTCAAGGAGATGC
GCCGCAGCCGCGTGACGCCCAACTTGGTCACCTATACGTCCCTGATGGAG
GCTTTTGTCAACGCGGGGTATCCCATGGCCGCCCTTTCCATTTCTGACGA
GATGCGGCGCAAGCCTGGCGTTGCCCGCGATGTGACAAGCTGCGTCTGGC
GTCTCAAGTGCTTCGTGGAGCTGGGTGACCTGGAGGCTATCGAAGGCCTA
ATACGGGAGATGGAGGAATGCGGCGTGCCTCTGAATGTAGTAGTGTATAA
CCAGTACCTGCGTGGTGCCATGCGCCTCGGCCAATACGAGCTGGCCCTTC
AGATCTTCACCAGCATGCTGGAGAAGAAACTGCCGCCCAACCTGGAGACC
CACCAGTGCCTTCTCGAGATGCCTGCACTTGGAACCGCCGCAGCCATCAG
TGGCGTGGCTGAGGGTGAAAAAGAGAGGAAACAGATGGAGAGCGCACGTG
ATCAGCTAGTTATGTTCTACCACGCAGCCCTGCAGCGTCTGGCGCAGCAC
AAGATCCGCGCAAGGGTCACGTTCTACGTGGCATTTATGCATGCATGCTT
GAGGACAGACAGACTGGATCTGGCAGCCGAGATCCTAGCGTTGAGGCGGG
CCAACACACTGCAGATATTCCAGCTCTTCAAGAAACACCAGGAGACGGTG
GAAAAGTGGGAAGGGAAGATTGACCGGGAGTTAAACAAGCGTTTTTATCT
AAACAAAAACCTGGTGTAG

Synonyms

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