NO17G01480.1, NO17G01480.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO17G01480.1
Unique NameNO17G01480.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length705
Alignment locationchr17:443650..444600 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:443650..444600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G01480.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01480NO17G01480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO17G01480.1NO17G01480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO17G01480.1.cds1NO17G01480.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO17G01480.1.cds2NO17G01480.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO17G01480.1.cds3NO17G01480.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO17G01480.1 ID=NO17G01480.1|Name=NO17G01480.1|organism=Nannochloropsis oceanica|type=mRNA|length=705bp
ATGGGCAAGGTCGCTCTGTGGACAGATGTGAGCGATGGCTTAATCGGTCC
TCCCCAGCTTTTGAAAGAGGGCGGTGGAAAGGAAGAGGAAGAAGAGCATG
ACGACGACGACGCCGCCTCTTCAACAATGACTCAAGCATTACATTTGCAC
CTTATTTTTCGTCTCTCAAGCAACGTGCCTGCGGATATTGATTATCAGGA
TTTGTTTCCCTTCCCTCTTATCCACATGGGATGGCCTCATCGGGTTGAGA
CGATGGGCGAGTCAGAAGAAAGGCGAGCGCACGAACAGCTCATTGCCGCC
TTTAAATCACGGGTTGTGGAGGAGGGAATATTCGAGAAAGAGAGAGACAA
GAATGATGGCCTGCCAGCCCATGTAGTACCGCCGACGGACCAGGTGATCA
AACATTTTTTGGTGCTAGGAGAGTGGAAGCTTGAGGAGGCGCTGGAAGAC
TTCAGGGCTCGGCAGCAGCAGCAGCCAGTGTGGGATCCGGCGGTGGAGGA
GCCGCAGGGGTTGGAAGAATTTCCTTTGTTTGAAGCGGGGGGGGGAGAAC
GGGGAGAAAGAGAGGATGGTAAATCTCAAGCGGCAGCAGCACCAGCAGAA
TATGAAGCGCTGGTTACGGAGCAGGAAGTCAAGCTGGGCATCACTGTAGA
GAACGTGTTGGAACGCACAGTCATTTCACCGTCGCCCGTACCTCCCCAGC
CTTAA
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protein sequence of NO17G01480.1

>NO17G01480.1-protein ID=NO17G01480.1-protein|Name=NO17G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MGKVALWTDVSDGLIGPPQLLKEGGGKEEEEEHDDDDAASSTMTQALHLH
LIFRLSSNVPADIDYQDLFPFPLIHMGWPHRVETMGESEERRAHEQLIAA
FKSRVVEEGIFEKERDKNDGLPAHVVPPTDQVIKHFLVLGEWKLEEALED
FRARQQQQPVWDPAVEEPQGLEEFPLFEAGGGERGEREDGKSQAAAAPAE
YEALVTEQEVKLGITVENVLERTVISPSPVPPQP*
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mRNA from alignment at chr17:443650..444600-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO17G01480.1 ID=NO17G01480.1|Name=NO17G01480.1|organism=Nannochloropsis oceanica|type=mRNA|length=951bp|location=Sequence derived from alignment at chr17:443650..444600- (Nannochloropsis oceanica)
ATGGGCAAGGTCGCTCTGTGGACAGATGTGAGCGATGGCTTAATCGGTCC
TCCCCAGCTTTTGAAAGAGGGCGGTGGAAAGGAAGAGGAAGAAGAGCATG
ACGACGACGACGCCGCCTCTTCAACAATGACTCAAGCATTACATTTGCAC
CTTATTTTTCGTCTCTCAAGCAACGTGCCTGCGGATATTGATTATCAGGA
TTTGTTTCCCTTCCCTCTTATCCACATGGGATGGCCTCATCGGGTTGAGA
CGATGGGCGAGTCAGAAGAAAGGCGAGCGCACGAACAGCTCATTGCCGCC
TTTAAATCACGGGTTGTGGAGGAGGGAATATTCGAGAAAGAGAGAGACAA
GAATGATGGCCTGCCAGCCCATGTAGTACCGCCGACGGACCAGGTGATCA
AACATTTTTTGGTGCTAGGAGAGTGGAAGCTTGAGGAGGCGCTGGAAGAC
TTCAGGGCTGTGCGGGAGGAGGCTCGAGAAGTGTCGGCGGCATATGCGAT
GGCAGCAGTGTCAGGCGGAGGAAGAGAAATAGGAAAGGAGGATGATTTGT
ATTAGCAGCGGCAGCAGCAGCAGCCAGTGTGGGATCCGGCGGTGGAGGAG
CCGCAGGGGTTGGAAGAATTTCCTTTGTTTGAAGCGGGGGGGGGAGAACG
GGGAGAAAGAGAGGATGGTAAATCTCAAGCGGCAGCAGCACCAGCAGAAT
ATGAAGCGCTGGTTACGGAGCAGGAAGTCAAGCTGGGCATCACTGTAGAG
AACGTGTTGGAACGCACAGTCATTTGTAAGTGCCTACACAAACAGCTTAG
CTTTCCCCACTATTGTCCCTGACCCACCTCCTGCTATTGGTCAGTCTTTC
CCCCCATATATTTACACGGGACAAGCACCCTTCTAACGCCCCCCTTTCTC
CTCTAAACTCTTCAAACACAAGCACCGTCGCCCGTACCTCCCCAGCCTTA
A
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Coding sequence (CDS) from alignment at chr17:443650..444600-

>NO17G01480.1 ID=NO17G01480.1|Name=NO17G01480.1|organism=Nannochloropsis oceanica|type=CDS|length=705bp|location=Sequence derived from alignment at chr17:443650..444600- (Nannochloropsis oceanica)
ATGGGCAAGGTCGCTCTGTGGACAGATGTGAGCGATGGCTTAATCGGTCC
TCCCCAGCTTTTGAAAGAGGGCGGTGGAAAGGAAGAGGAAGAAGAGCATG
ACGACGACGACGCCGCCTCTTCAACAATGACTCAAGCATTACATTTGCAC
CTTATTTTTCGTCTCTCAAGCAACGTGCCTGCGGATATTGATTATCAGGA
TTTGTTTCCCTTCCCTCTTATCCACATGGGATGGCCTCATCGGGTTGAGA
CGATGGGCGAGTCAGAAGAAAGGCGAGCGCACGAACAGCTCATTGCCGCC
TTTAAATCACGGGTTGTGGAGGAGGGAATATTCGAGAAAGAGAGAGACAA
GAATGATGGCCTGCCAGCCCATGTAGTACCGCCGACGGACCAGGTGATCA
AACATTTTTTGGTGCTAGGAGAGTGGAAGCTTGAGGAGGCGCTGGAAGAC
TTCAGGGCTCGGCAGCAGCAGCAGCCAGTGTGGGATCCGGCGGTGGAGGA
GCCGCAGGGGTTGGAAGAATTTCCTTTGTTTGAAGCGGGGGGGGGAGAAC
GGGGAGAAAGAGAGGATGGTAAATCTCAAGCGGCAGCAGCACCAGCAGAA
TATGAAGCGCTGGTTACGGAGCAGGAAGTCAAGCTGGGCATCACTGTAGA
GAACGTGTTGGAACGCACAGTCATTTCACCGTCGCCCGTACCTCCCCAGC
CTTAA
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Synonyms
Publications