NO17G01420.1, NO17G01420.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01420.1
Unique Name	NO17G01420.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3576
Alignment location	chr17:432183..435758 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:432183..435758 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G01420.1 vs.
Match: XP_001728972.1 (hypothetical protein MGL_3966 [Malassezia globosa CBS 7966]; EDP41758.1 hypothetical protein MGL_3966 [Malassezia globosa CBS 7966])

HSP 1 Score: 390.6 bits (1002), Expect = 1.800e-104
Identity = 255/705 (36.17%), Postives = 350/705 (49.65%), Query Frame = 0

Query:  163 KCVTSWVQDARGYSWRLMYFPYGNHKDMCY---SIYLEIDPSNPEHPPPNPYCRRWVRFTLRDRSPKPYHTEVLNHEYTLNSTDWGSPKF-----LTEEVLKKQNPSFMTADERILVDVSIQDLSG-----YRNLENYDSAKETGMVGLKNQGATCYMNSLLQFLWSLRSLRRAVYAMPTEGEDKGRSVALALQRVFFRLQTESKAVSTKELTGAFGWNIRESNVQQDVQELNRVLCDRLEEKMKGTRVEGTVKALFGGKTRPTTRCLNVECQSSREEEFYDVQLDVKGYPTLKDSLDAFVRPEMMVGADQYDAEGHGKQDAERFTRFTECPPVLTIHLKRFEYNFHTGAMVKVNQRFLFPTSLDLSPYLAKEEQQLLGERVALPYCLHSVLVHSGDVDAGHYYAYVRQDDRLGFPQQDAAAAAAAEAAAAEKAVAGETMQPGNAKWFKYDDDVVTRIPEIDMLEDSFGPPL--DEGGREGGVGGCTGGGIKGLTNNKASSAYMLVYVREAAWEEVMKPIDEGDIPKGLVERFKREKEEVEKKAREVREQHLYTTVELLQEADVRAFRHYINERELVTDFVSMRYGHDKLKQRSHILPPLTRSRGGDLPALPHPALPPVVKVRKEEPVAAIMLQARDVLGIPLHQQRLWCLTSRQNHTLRLDTALVMQSEEGGRKEGGKGEADKPETVVPAEDVSLYLQMPAERL 853
            K +T    +  G+ WR++ FP+GN     Y   S+YL+    N + P     C ++         P  + T   +H +T    DWG  +F     L   + K+  P  +  D++ +V   ++ L       + N  NYDS KETG VG+KNQGATCYMNSLLQ L+     RRAVY +PTE +    SVA ALQRVF+ LQT    V T ELT +FGW   +S +Q DVQE NRVL ++LE KMKGT  +G +  LF GK +   RC+NV+ +SSR E+FYD+QL+VKG   L+ S   +++ EM+ G ++Y AEG+G QDAE+   F   PPVL + LKRFEY+     MVK+N R  FP S+DLSP+L KE Q          Y LH VLVHSGD+  GHY+A ++       P+ D                         + WFK+DDD VT     ++LED+FG  +    G             +K  TN     AYMLVY+RE+   E++KPI+  D+P  L +R   E+ +VE + RE  EQHLY T +++ E                 D   M  G D +     +       R  DLP           +V K EP  +   +      +P    RLW L +RQN T+R                        P+ +VP  D SL L+M  +R+
Sbjct:   66 KRITGPEFECGGHRWRILLFPFGNSNGQPYDMVSVYLDY-ADNKDTPEGWHACAQFALVISNPNDPTLFSTSQAHHRFTAEEMDWGFTRFNEFRKLAVPLDKRTRP--IIEDDKAVVSAYVRVLKDPTGVLWHNFINYDSKKETGFVGIKNQGATCYMNSLLQSLYFTNYFRRAVYQIPTENDIPTDSVAYALQRVFYLLQTNDAPVGTTELTKSFGWKSLDSFLQHDVQEFNRVLQEKLEIKMKGTAADGAISRLFVGKMKSFLRCVNVKYESSRSEDFYDIQLNVKGMANLEQSFWNYIQTEMLEGDNKYHAEGYGLQDAEKGVVFEHFPPVLHLQLKRFEYDIEKDMMVKINDRHEFPLSIDLSPFLIKEVQ-----NEPWVYKLHGVLVHSGDLHGGHYFALIK-------PEPD-------------------------SNWFKFDDDRVTPATLKEVLEDNFGGEMIPMNGANRNAPATAPVRAMKRFTN-----AYMLVYIRESQMGEILKPIEPVDVPNYLSQRVDEERLQVEARRREREEQHLYLTTKIITE-----------------DIFRMHQGFDLVSFDDRM------GRPTDLPTF---------RVLKNEPFVSFKARLASHFEVPDQLMRLWVLVNRQNKTVR------------------------PDALVPENDPSLTLEMVRDRM 669

The following BLAST results are available for this feature:

BLAST of NO17G01420.1 vs.

BLAST of NO17G01420.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_001728972.1	1.800e-104	36.17	hypothetical protein MGL_3966 [Malassezia globosa ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G01420	NO17G01420	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01420.1	NO17G01420.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01420.1.cds1	NO17G01420.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:432183..435758+
coding sequence from alignment at chr17:432183..435758+

mRNA sequence

>NO17G01420.1 ID=NO17G01420.1|Name=NO17G01420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3576bp
ATGCCTCCTGTGGGATCCACCTCGCCGGTCCGGAAGCCTGCAGCGCTAGG
CAAGCCTCAGGAGGAGACAGCTGACTTTCACCCAGACCAGGGCGGCAACG
GAGCCATGCATTCCCCCGAGGCACGACACAAAGTTATGGAGATGAAGATG
CCACCACAAAGTGGGTGTGGGGGTATCCAACGGGCCCTGGACACGGAGGA
AGGAGAAGCTGACGTGATGACAAATCCGATGGAAGGTGCCAATGCCAGTC
CCATCGCCGCCACCACCACGGAGCCCGCCGTCGTTCCGCCTGCAAAAGAA
AAGGCTGTTGTGGACGCAGACGTGGACAACGACAGTGTTTTTCCGAGTTC
CGAGGACGTTGCGGTGGGGCAGGTGGTGGTGGCCTGCGTCAAGCCTGGCA
TGCTGAAGTTCACCGCCGCCTTGCCTGCCCCCGACCTAGCCGACTACGCA
GCAGCGAAACTGCGAGCGAAAGACACAGACACGTACAAATGCGTGACTTC
CTGGGTGCAAGACGCGCGGGGGTACTCCTGGCGGCTCATGTATTTTCCCT
ATGGCAACCACAAAGACATGTGCTATTCAATCTACCTCGAGATCGACCCC
TCCAACCCCGAGCATCCCCCACCCAACCCCTACTGCCGTCGCTGGGTCAG
ATTCACCTTGCGCGATCGCTCACCCAAGCCGTATCACACTGAAGTTCTTA
ATCATGAATATACGCTTAATAGCACGGATTGGGGGTCGCCGAAATTTTTG
ACGGAAGAAGTGCTGAAAAAACAAAATCCCTCGTTTATGACGGCGGATGA
ACGAATTTTGGTGGATGTGAGCATTCAGGATTTAAGTGGCTATAGGAATT
TGGAAAATTATGACTCGGCTAAGGAGACGGGCATGGTGGGGTTGAAGAAT
CAGGGAGCCACGTGTTACATGAACTCGCTGTTACAGTTTCTGTGGAGCTT
GCGGAGTTTGAGGAGGGCTGTGTACGCGATGCCGACAGAGGGGGAGGATA
AGGGCAGGAGCGTGGCGTTGGCGCTGCAGAGGGTCTTCTTTCGATTGCAG
ACAGAGAGTAAGGCGGTGAGTACAAAGGAGCTGACGGGGGCATTTGGCTG
GAATATTCGTGAGAGTAATGTGCAACAGGATGTGCAGGAATTGAACCGGG
TGCTGTGTGACCGTTTGGAGGAGAAGATGAAGGGGACTCGTGTTGAGGGC
ACGGTGAAGGCGTTGTTTGGCGGAAAGACGAGACCGACCACGAGGTGTTT
GAATGTGGAGTGTCAGAGTTCACGGGAGGAGGAGTTTTATGACGTCCAAT
TGGATGTGAAGGGATATCCGACTTTGAAGGATTCACTGGACGCCTTCGTG
AGGCCCGAGATGATGGTTGGGGCGGATCAGTACGATGCGGAGGGGCATGG
CAAGCAAGACGCGGAACGATTTACACGCTTTACGGAGTGCCCGCCGGTTC
TAACTATTCATTTAAAGCGGTTTGAGTATAATTTTCATACTGGGGCGATG
GTGAAGGTTAACCAGAGGTTTCTCTTTCCGACTTCGCTTGATTTGTCCCC
GTACCTTGCGAAGGAGGAACAGCAGCTCTTAGGGGAGAGAGTGGCACTTC
CTTATTGTCTTCATTCGGTGTTGGTTCATAGTGGGGATGTGGACGCGGGG
CATTACTACGCCTATGTCCGGCAGGATGACCGGCTGGGTTTCCCACAGCA
AGATGCTGCTGCAGCAGCAGCAGCAGAAGCAGCAGCAGCAGAAAAGGCGG
TGGCAGGCGAGACTATGCAGCCAGGAAATGCTAAGTGGTTTAAGTATGAT
GATGATGTTGTGACGAGGATACCGGAAATAGACATGCTTGAGGACAGTTT
TGGACCCCCACTGGACGAGGGAGGGAGGGAGGGAGGGGTGGGTGGTTGTA
CAGGGGGAGGTATCAAGGGTTTGACTAATAATAAGGCGAGTAGTGCTTAT
ATGCTTGTGTATGTACGAGAGGCGGCGTGGGAGGAGGTGATGAAGCCAAT
TGATGAGGGGGATATTCCGAAGGGGTTGGTGGAAAGGTTCAAAAGGGAGA
AGGAGGAGGTGGAGAAGAAGGCGAGGGAGGTGAGGGAGCAGCATTTGTAT
ACCACAGTGGAATTATTGCAGGAAGCGGATGTCCGGGCGTTCAGGCATTA
TATTAACGAACGAGAGCTTGTCACGGACTTTGTGTCTATGCGCTATGGAC
ATGATAAACTCAAGCAGCGTTCCCACATTCTCCCTCCTCTGACGCGCTCA
CGGGGCGGAGACCTCCCCGCCTTGCCACATCCAGCCTTGCCCCCCGTGGT
GAAGGTTAGGAAGGAGGAGCCTGTTGCGGCGATCATGCTACAAGCGAGGG
ATGTGTTGGGCATTCCTTTGCATCAACAACGGCTCTGGTGTCTGACTTCG
AGGCAGAATCACACCCTGCGGTTGGATACGGCCCTGGTCATGCAATCTGA
GGAAGGAGGTAGGAAGGAAGGGGGGAAGGGAGAGGCGGATAAACCTGAAA
CGGTAGTGCCTGCGGAAGACGTGTCACTTTATTTGCAGATGCCGGCGGAG
CGGCTGTTGGAGTGCGACAAAAGCTTCACGGCCGTTTATGTCGAGGACTT
GGGAGAGGAAGGGATGGATGGCGAGGAAAGGGAGGAGGAGAAGGTGGTCG
AAGTGGAAAAGGAGAAGAAAGAACAAAAGGAGGAAGAGGGCTTTCTGCGG
TCTAGTGGGAAGACGAAACGTGGCGAGAATAAGGAGGGGGTAGAAGATGA
ATGCGCATCTTTGAAGAAGCGAGTCAGAACGGAAGACAAGACGCGCTCTC
TTTATCTCTCTTCTGGAGGTGCAGCGCGAGCTGGCGAGCGAGTTCAAACA
GTGGAAGAGCTAATGAAATTCTTGAAGCTCTACCCTCCTATACCCCTCCC
TCCCAACTCTGTCTTCATTTTTTTCAAGGCATACCGACCTAAGGCAGCAG
CAGTGGAGGCAAGCGATCCATTGACCTACCTTTTTTCCATGCATCTCCCC
CTCAGTATCACAATCCGAGAGGTTCTGAATCGTCTCCGACCACGCATAAG
CTGGATGCCGGAAGAAGATGAGGCGGTAGAGCTCCACGAAGAGATCACAC
CCGGGAAAGTAGACCTGCTCAAGCTTGAGAGCACGCTGGAAGCAAACGAA
ATCCTGACCGGCGACATTCTGATCCTGCAGCTCGCCCTCCCTCCCTCTCC
TCCTCCGCCACTCTCTTCCTCCCTTTCCTTGCCTGGGCGAATCGCAATCT
CCGACGCGTCTGCTAATGGCAAAAACGATCATGGAGACCCCCCCCCCCAA
CGCGCATCCTCTCTCCCTCCCTCGCCCATGTCACACCCGCCACCACCATT
ACCATCTCCGGAGCCGACAAAGCAGTCAAATCTGCCCAGGAGAAAGACAC
AGACTTCAGATACAACCTTCCGGGCCTTCCCCTCCGTGCCTGCCACTACC
TCTCCTACCTCGTCAAACGCCGAGTTTTCCGCATGCGCCCTTACGGCTCA
GCAGAAGAAAATGTACTCCAGCGCTGTAAGGCTGACCTTGCCGCTGCTGC
TGTTCCCGGCAAGGTTGAGGTGGTGA

protein sequence of NO17G01420.1

>NO17G01420.1-protein ID=NO17G01420.1-protein|Name=NO17G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1192bp
MPPVGSTSPVRKPAALGKPQEETADFHPDQGGNGAMHSPEARHKVMEMKM
PPQSGCGGIQRALDTEEGEADVMTNPMEGANASPIAATTTEPAVVPPAKE
KAVVDADVDNDSVFPSSEDVAVGQVVVACVKPGMLKFTAALPAPDLADYA
AAKLRAKDTDTYKCVTSWVQDARGYSWRLMYFPYGNHKDMCYSIYLEIDP
SNPEHPPPNPYCRRWVRFTLRDRSPKPYHTEVLNHEYTLNSTDWGSPKFL
TEEVLKKQNPSFMTADERILVDVSIQDLSGYRNLENYDSAKETGMVGLKN
QGATCYMNSLLQFLWSLRSLRRAVYAMPTEGEDKGRSVALALQRVFFRLQ
TESKAVSTKELTGAFGWNIRESNVQQDVQELNRVLCDRLEEKMKGTRVEG
TVKALFGGKTRPTTRCLNVECQSSREEEFYDVQLDVKGYPTLKDSLDAFV
RPEMMVGADQYDAEGHGKQDAERFTRFTECPPVLTIHLKRFEYNFHTGAM
VKVNQRFLFPTSLDLSPYLAKEEQQLLGERVALPYCLHSVLVHSGDVDAG
HYYAYVRQDDRLGFPQQDAAAAAAAEAAAAEKAVAGETMQPGNAKWFKYD
DDVVTRIPEIDMLEDSFGPPLDEGGREGGVGGCTGGGIKGLTNNKASSAY
MLVYVREAAWEEVMKPIDEGDIPKGLVERFKREKEEVEKKAREVREQHLY
TTVELLQEADVRAFRHYINERELVTDFVSMRYGHDKLKQRSHILPPLTRS
RGGDLPALPHPALPPVVKVRKEEPVAAIMLQARDVLGIPLHQQRLWCLTS
RQNHTLRLDTALVMQSEEGGRKEGGKGEADKPETVVPAEDVSLYLQMPAE
RLLECDKSFTAVYVEDLGEEGMDGEEREEEKVVEVEKEKKEQKEEEGFLR
SSGKTKRGENKEGVEDECASLKKRVRTEDKTRSLYLSSGGAARAGERVQT
VEELMKFLKLYPPIPLPPNSVFIFFKAYRPKAAAVEASDPLTYLFSMHLP
LSITIREVLNRLRPRISWMPEEDEAVELHEEITPGKVDLLKLESTLEANE
ILTGDILILQLALPPSPPPPLSSSLSLPGRIAISDASANGKNDHGDPPPQ
RASSLPPSPMSHPPPPLPSPEPTKQSNLPRRKTQTSDTTFRAFPSVPATT
SPTSSNAEFSACALTAQQKKMYSSAVRLTLPLLLFPARLRW*

mRNA from alignment at chr17:432183..435758+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G01420.1 ID=NO17G01420.1|Name=NO17G01420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3576bp|location=Sequence derived from alignment at chr17:432183..435758+ (Nannochloropsis oceanica)
ATGCCTCCTGTGGGATCCACCTCGCCGGTCCGGAAGCCTGCAGCGCTAGG
CAAGCCTCAGGAGGAGACAGCTGACTTTCACCCAGACCAGGGCGGCAACG
GAGCCATGCATTCCCCCGAGGCACGACACAAAGTTATGGAGATGAAGATG
CCACCACAAAGTGGGTGTGGGGGTATCCAACGGGCCCTGGACACGGAGGA
AGGAGAAGCTGACGTGATGACAAATCCGATGGAAGGTGCCAATGCCAGTC
CCATCGCCGCCACCACCACGGAGCCCGCCGTCGTTCCGCCTGCAAAAGAA
AAGGCTGTTGTGGACGCAGACGTGGACAACGACAGTGTTTTTCCGAGTTC
CGAGGACGTTGCGGTGGGGCAGGTGGTGGTGGCCTGCGTCAAGCCTGGCA
TGCTGAAGTTCACCGCCGCCTTGCCTGCCCCCGACCTAGCCGACTACGCA
GCAGCGAAACTGCGAGCGAAAGACACAGACACGTACAAATGCGTGACTTC
CTGGGTGCAAGACGCGCGGGGGTACTCCTGGCGGCTCATGTATTTTCCCT
ATGGCAACCACAAAGACATGTGCTATTCAATCTACCTCGAGATCGACCCC
TCCAACCCCGAGCATCCCCCACCCAACCCCTACTGCCGTCGCTGGGTCAG
ATTCACCTTGCGCGATCGCTCACCCAAGCCGTATCACACTGAAGTTCTTA
ATCATGAATATACGCTTAATAGCACGGATTGGGGGTCGCCGAAATTTTTG
ACGGAAGAAGTGCTGAAAAAACAAAATCCCTCGTTTATGACGGCGGATGA
ACGAATTTTGGTGGATGTGAGCATTCAGGATTTAAGTGGCTATAGGAATT
TGGAAAATTATGACTCGGCTAAGGAGACGGGCATGGTGGGGTTGAAGAAT
CAGGGAGCCACGTGTTACATGAACTCGCTGTTACAGTTTCTGTGGAGCTT
GCGGAGTTTGAGGAGGGCTGTGTACGCGATGCCGACAGAGGGGGAGGATA
AGGGCAGGAGCGTGGCGTTGGCGCTGCAGAGGGTCTTCTTTCGATTGCAG
ACAGAGAGTAAGGCGGTGAGTACAAAGGAGCTGACGGGGGCATTTGGCTG
GAATATTCGTGAGAGTAATGTGCAACAGGATGTGCAGGAATTGAACCGGG
TGCTGTGTGACCGTTTGGAGGAGAAGATGAAGGGGACTCGTGTTGAGGGC
ACGGTGAAGGCGTTGTTTGGCGGAAAGACGAGACCGACCACGAGGTGTTT
GAATGTGGAGTGTCAGAGTTCACGGGAGGAGGAGTTTTATGACGTCCAAT
TGGATGTGAAGGGATATCCGACTTTGAAGGATTCACTGGACGCCTTCGTG
AGGCCCGAGATGATGGTTGGGGCGGATCAGTACGATGCGGAGGGGCATGG
CAAGCAAGACGCGGAACGATTTACACGCTTTACGGAGTGCCCGCCGGTTC
TAACTATTCATTTAAAGCGGTTTGAGTATAATTTTCATACTGGGGCGATG
GTGAAGGTTAACCAGAGGTTTCTCTTTCCGACTTCGCTTGATTTGTCCCC
GTACCTTGCGAAGGAGGAACAGCAGCTCTTAGGGGAGAGAGTGGCACTTC
CTTATTGTCTTCATTCGGTGTTGGTTCATAGTGGGGATGTGGACGCGGGG
CATTACTACGCCTATGTCCGGCAGGATGACCGGCTGGGTTTCCCACAGCA
AGATGCTGCTGCAGCAGCAGCAGCAGAAGCAGCAGCAGCAGAAAAGGCGG
TGGCAGGCGAGACTATGCAGCCAGGAAATGCTAAGTGGTTTAAGTATGAT
GATGATGTTGTGACGAGGATACCGGAAATAGACATGCTTGAGGACAGTTT
TGGACCCCCACTGGACGAGGGAGGGAGGGAGGGAGGGGTGGGTGGTTGTA
CAGGGGGAGGTATCAAGGGTTTGACTAATAATAAGGCGAGTAGTGCTTAT
ATGCTTGTGTATGTACGAGAGGCGGCGTGGGAGGAGGTGATGAAGCCAAT
TGATGAGGGGGATATTCCGAAGGGGTTGGTGGAAAGGTTCAAAAGGGAGA
AGGAGGAGGTGGAGAAGAAGGCGAGGGAGGTGAGGGAGCAGCATTTGTAT
ACCACAGTGGAATTATTGCAGGAAGCGGATGTCCGGGCGTTCAGGCATTA
TATTAACGAACGAGAGCTTGTCACGGACTTTGTGTCTATGCGCTATGGAC
ATGATAAACTCAAGCAGCGTTCCCACATTCTCCCTCCTCTGACGCGCTCA
CGGGGCGGAGACCTCCCCGCCTTGCCACATCCAGCCTTGCCCCCCGTGGT
GAAGGTTAGGAAGGAGGAGCCTGTTGCGGCGATCATGCTACAAGCGAGGG
ATGTGTTGGGCATTCCTTTGCATCAACAACGGCTCTGGTGTCTGACTTCG
AGGCAGAATCACACCCTGCGGTTGGATACGGCCCTGGTCATGCAATCTGA
GGAAGGAGGTAGGAAGGAAGGGGGGAAGGGAGAGGCGGATAAACCTGAAA
CGGTAGTGCCTGCGGAAGACGTGTCACTTTATTTGCAGATGCCGGCGGAG
CGGCTGTTGGAGTGCGACAAAAGCTTCACGGCCGTTTATGTCGAGGACTT
GGGAGAGGAAGGGATGGATGGCGAGGAAAGGGAGGAGGAGAAGGTGGTCG
AAGTGGAAAAGGAGAAGAAAGAACAAAAGGAGGAAGAGGGCTTTCTGCGG
TCTAGTGGGAAGACGAAACGTGGCGAGAATAAGGAGGGGGTAGAAGATGA
ATGCGCATCTTTGAAGAAGCGAGTCAGAACGGAAGACAAGACGCGCTCTC
TTTATCTCTCTTCTGGAGGTGCAGCGCGAGCTGGCGAGCGAGTTCAAACA
GTGGAAGAGCTAATGAAATTCTTGAAGCTCTACCCTCCTATACCCCTCCC
TCCCAACTCTGTCTTCATTTTTTTCAAGGCATACCGACCTAAGGCAGCAG
CAGTGGAGGCAAGCGATCCATTGACCTACCTTTTTTCCATGCATCTCCCC
CTCAGTATCACAATCCGAGAGGTTCTGAATCGTCTCCGACCACGCATAAG
CTGGATGCCGGAAGAAGATGAGGCGGTAGAGCTCCACGAAGAGATCACAC
CCGGGAAAGTAGACCTGCTCAAGCTTGAGAGCACGCTGGAAGCAAACGAA
ATCCTGACCGGCGACATTCTGATCCTGCAGCTCGCCCTCCCTCCCTCTCC
TCCTCCGCCACTCTCTTCCTCCCTTTCCTTGCCTGGGCGAATCGCAATCT
CCGACGCGTCTGCTAATGGCAAAAACGATCATGGAGACCCCCCCCCCCAA
CGCGCATCCTCTCTCCCTCCCTCGCCCATGTCACACCCGCCACCACCATT
ACCATCTCCGGAGCCGACAAAGCAGTCAAATCTGCCCAGGAGAAAGACAC
AGACTTCAGATACAACCTTCCGGGCCTTCCCCTCCGTGCCTGCCACTACC
TCTCCTACCTCGTCAAACGCCGAGTTTTCCGCATGCGCCCTTACGGCTCA
GCAGAAGAAAATGTACTCCAGCGCTGTAAGGCTGACCTTGCCGCTGCTGC
TGTTCCCGGCAAGGTTGAGGTGGTGA

Coding sequence (CDS) from alignment at chr17:432183..435758+

>NO17G01420.1 ID=NO17G01420.1|Name=NO17G01420.1|organism=Nannochloropsis oceanica|type=CDS|length=3576bp|location=Sequence derived from alignment at chr17:432183..435758+ (Nannochloropsis oceanica)
ATGCCTCCTGTGGGATCCACCTCGCCGGTCCGGAAGCCTGCAGCGCTAGG
CAAGCCTCAGGAGGAGACAGCTGACTTTCACCCAGACCAGGGCGGCAACG
GAGCCATGCATTCCCCCGAGGCACGACACAAAGTTATGGAGATGAAGATG
CCACCACAAAGTGGGTGTGGGGGTATCCAACGGGCCCTGGACACGGAGGA
AGGAGAAGCTGACGTGATGACAAATCCGATGGAAGGTGCCAATGCCAGTC
CCATCGCCGCCACCACCACGGAGCCCGCCGTCGTTCCGCCTGCAAAAGAA
AAGGCTGTTGTGGACGCAGACGTGGACAACGACAGTGTTTTTCCGAGTTC
CGAGGACGTTGCGGTGGGGCAGGTGGTGGTGGCCTGCGTCAAGCCTGGCA
TGCTGAAGTTCACCGCCGCCTTGCCTGCCCCCGACCTAGCCGACTACGCA
GCAGCGAAACTGCGAGCGAAAGACACAGACACGTACAAATGCGTGACTTC
CTGGGTGCAAGACGCGCGGGGGTACTCCTGGCGGCTCATGTATTTTCCCT
ATGGCAACCACAAAGACATGTGCTATTCAATCTACCTCGAGATCGACCCC
TCCAACCCCGAGCATCCCCCACCCAACCCCTACTGCCGTCGCTGGGTCAG
ATTCACCTTGCGCGATCGCTCACCCAAGCCGTATCACACTGAAGTTCTTA
ATCATGAATATACGCTTAATAGCACGGATTGGGGGTCGCCGAAATTTTTG
ACGGAAGAAGTGCTGAAAAAACAAAATCCCTCGTTTATGACGGCGGATGA
ACGAATTTTGGTGGATGTGAGCATTCAGGATTTAAGTGGCTATAGGAATT
TGGAAAATTATGACTCGGCTAAGGAGACGGGCATGGTGGGGTTGAAGAAT
CAGGGAGCCACGTGTTACATGAACTCGCTGTTACAGTTTCTGTGGAGCTT
GCGGAGTTTGAGGAGGGCTGTGTACGCGATGCCGACAGAGGGGGAGGATA
AGGGCAGGAGCGTGGCGTTGGCGCTGCAGAGGGTCTTCTTTCGATTGCAG
ACAGAGAGTAAGGCGGTGAGTACAAAGGAGCTGACGGGGGCATTTGGCTG
GAATATTCGTGAGAGTAATGTGCAACAGGATGTGCAGGAATTGAACCGGG
TGCTGTGTGACCGTTTGGAGGAGAAGATGAAGGGGACTCGTGTTGAGGGC
ACGGTGAAGGCGTTGTTTGGCGGAAAGACGAGACCGACCACGAGGTGTTT
GAATGTGGAGTGTCAGAGTTCACGGGAGGAGGAGTTTTATGACGTCCAAT
TGGATGTGAAGGGATATCCGACTTTGAAGGATTCACTGGACGCCTTCGTG
AGGCCCGAGATGATGGTTGGGGCGGATCAGTACGATGCGGAGGGGCATGG
CAAGCAAGACGCGGAACGATTTACACGCTTTACGGAGTGCCCGCCGGTTC
TAACTATTCATTTAAAGCGGTTTGAGTATAATTTTCATACTGGGGCGATG
GTGAAGGTTAACCAGAGGTTTCTCTTTCCGACTTCGCTTGATTTGTCCCC
GTACCTTGCGAAGGAGGAACAGCAGCTCTTAGGGGAGAGAGTGGCACTTC
CTTATTGTCTTCATTCGGTGTTGGTTCATAGTGGGGATGTGGACGCGGGG
CATTACTACGCCTATGTCCGGCAGGATGACCGGCTGGGTTTCCCACAGCA
AGATGCTGCTGCAGCAGCAGCAGCAGAAGCAGCAGCAGCAGAAAAGGCGG
TGGCAGGCGAGACTATGCAGCCAGGAAATGCTAAGTGGTTTAAGTATGAT
GATGATGTTGTGACGAGGATACCGGAAATAGACATGCTTGAGGACAGTTT
TGGACCCCCACTGGACGAGGGAGGGAGGGAGGGAGGGGTGGGTGGTTGTA
CAGGGGGAGGTATCAAGGGTTTGACTAATAATAAGGCGAGTAGTGCTTAT
ATGCTTGTGTATGTACGAGAGGCGGCGTGGGAGGAGGTGATGAAGCCAAT
TGATGAGGGGGATATTCCGAAGGGGTTGGTGGAAAGGTTCAAAAGGGAGA
AGGAGGAGGTGGAGAAGAAGGCGAGGGAGGTGAGGGAGCAGCATTTGTAT
ACCACAGTGGAATTATTGCAGGAAGCGGATGTCCGGGCGTTCAGGCATTA
TATTAACGAACGAGAGCTTGTCACGGACTTTGTGTCTATGCGCTATGGAC
ATGATAAACTCAAGCAGCGTTCCCACATTCTCCCTCCTCTGACGCGCTCA
CGGGGCGGAGACCTCCCCGCCTTGCCACATCCAGCCTTGCCCCCCGTGGT
GAAGGTTAGGAAGGAGGAGCCTGTTGCGGCGATCATGCTACAAGCGAGGG
ATGTGTTGGGCATTCCTTTGCATCAACAACGGCTCTGGTGTCTGACTTCG
AGGCAGAATCACACCCTGCGGTTGGATACGGCCCTGGTCATGCAATCTGA
GGAAGGAGGTAGGAAGGAAGGGGGGAAGGGAGAGGCGGATAAACCTGAAA
CGGTAGTGCCTGCGGAAGACGTGTCACTTTATTTGCAGATGCCGGCGGAG
CGGCTGTTGGAGTGCGACAAAAGCTTCACGGCCGTTTATGTCGAGGACTT
GGGAGAGGAAGGGATGGATGGCGAGGAAAGGGAGGAGGAGAAGGTGGTCG
AAGTGGAAAAGGAGAAGAAAGAACAAAAGGAGGAAGAGGGCTTTCTGCGG
TCTAGTGGGAAGACGAAACGTGGCGAGAATAAGGAGGGGGTAGAAGATGA
ATGCGCATCTTTGAAGAAGCGAGTCAGAACGGAAGACAAGACGCGCTCTC
TTTATCTCTCTTCTGGAGGTGCAGCGCGAGCTGGCGAGCGAGTTCAAACA
GTGGAAGAGCTAATGAAATTCTTGAAGCTCTACCCTCCTATACCCCTCCC
TCCCAACTCTGTCTTCATTTTTTTCAAGGCATACCGACCTAAGGCAGCAG
CAGTGGAGGCAAGCGATCCATTGACCTACCTTTTTTCCATGCATCTCCCC
CTCAGTATCACAATCCGAGAGGTTCTGAATCGTCTCCGACCACGCATAAG
CTGGATGCCGGAAGAAGATGAGGCGGTAGAGCTCCACGAAGAGATCACAC
CCGGGAAAGTAGACCTGCTCAAGCTTGAGAGCACGCTGGAAGCAAACGAA
ATCCTGACCGGCGACATTCTGATCCTGCAGCTCGCCCTCCCTCCCTCTCC
TCCTCCGCCACTCTCTTCCTCCCTTTCCTTGCCTGGGCGAATCGCAATCT
CCGACGCGTCTGCTAATGGCAAAAACGATCATGGAGACCCCCCCCCCCAA
CGCGCATCCTCTCTCCCTCCCTCGCCCATGTCACACCCGCCACCACCATT
ACCATCTCCGGAGCCGACAAAGCAGTCAAATCTGCCCAGGAGAAAGACAC
AGACTTCAGATACAACCTTCCGGGCCTTCCCCTCCGTGCCTGCCACTACC
TCTCCTACCTCGTCAAACGCCGAGTTTTCCGCATGCGCCCTTACGGCTCA
GCAGAAGAAAATGTACTCCAGCGCTGTAAGGCTGACCTTGCCGCTGCTGC
TGTTCCCGGCAAGGTTGAGGTGGTGA

Synonyms

Publications