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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr17 | genome | chr17:337827..343696 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO17G01080.1 vs.
Match: EWM21127.1 (Uncharacterized protein family UPF0120 [Nannochloropsis gaditana]) HSP 1 Score: 883.2 bits (2281), Expect = 6.300e-253 Identity = 546/889 (61.42%), Postives = 665/889 (74.80%), Query Frame = 0
Query: 1 MAKTGNKATRKLAKKGLLDFTSRVGSKKGKGGGMVGKGGTAKAMRDGPAATGHSKGGKRGGSKPLQKSSGMK--RPGADKGGVDEEDDKEALAEREDRDGIEEMDVDDFMKSGMFGGEDGEDSAEEEEE--EEEEDDEEEEKWGSEQGEDDNDDEGKMDQDDAEEDEEEQEEVDEEEKMLEDEVKQHKAELERLKAKDPDFFKFLEKNDGNLLSFGQNDEEDKEEEANAGGDDDEGEEEDEEEGDPTTPTTIEEDVGVPKELTLALLKTIEHAALEQHSLKGLRKLVLAFKAASHMADESSRHGPSQQAYTIASSSVFDRLLVTCLTSLPEAFGHHLFQNPDYSAVDPAPFAKLGSIPAFRSLRPMTYRSLKALHYLLGQVTEASLLSFLLSRLERFLPFLIPFPRLAKFYLKTLLSLWATSEALDVKLSSFLRIRQAATVLPFPFLEDCLKGIYLAYARNAKFVTETSLPGLTLMGNCVVELYGLDMTSAYQHAFVYLRQLALHLRAAYTKKTAEALQKVYCWQFLNCCKVWVAVLTAYPSLPPSSSSSSSEQQQQELSELIFPLAQILIGMIKLAPSARHYPLALHALTLLQRLAARAHVFIPCASFCLDMLENPAFHKKAKPTTDPPPSLLLLLKLTGKSGIEFKNVQESLVTECMDVLTQEILIYRYTIALPEYVFPIKERLKRWAKKSTHQNARWRALARGIVDECEKRGKWVEKERMRREIAPTDKTSFEALFPQGAGR--EGGEMDAGGRLKASLDAKALREGLGGEDAMLVQQQQRQQQQAQKQQLQHKEKGRKKVKTGLAEGEDEAEKNVGKKGDKKGGEKQHHQQQQQQGVPVERMEDEIGALGEWS------------------DDDDDEDEEEEPSE 866
MAKTGNKATRK+AKKGLLDFTSRVG+KKGK RDG A S+GGK G + Q +G RP DK + +D ++ ++ ++ GIEEMDVD FMKSGMFGGE GE+SA+EE + EE ED E+E E+ ED+ +D D + DE E++ DEEE++LE EV+ HKAELERLKAKDP+FF+FLEKNDGNLLSFG++++ ++++E +++E EEE++ + P+ E G +ELTLALLK IEH+A EQHSLK LR+LVLAFKAASHMADESSR P +QA++IASSSVFDRLLVTCLT LP+AFGHHLFQNP YSA+DPAPFAKL +PAFRSLRP YRSLKALHYLLGQ+TE SLL+F LSRLERFLPFL+ FPRLAKFYL+TLLSLWA SEALDVKL +FLR+RQAATVLPFPFLE CLKG YL+YARNAKFV+E SLPGLTLMGN +VELYGLD+ SAYQHAFVY+RQLALHLRAAYTKKT EALQKV CWQ+LNCCKVWVAVLTA+ + P S + S +L EL+FPLAQIL+G ++L PSAR YPL LH LTLLQRLAARA VFIPCA+ CL MLE+PA KK KP+T+ PPSL L LKL GK+G+E KNVQE+LV CMDVL+QEIL+YRY +A PEY +PIK+RL+R+AK T +NARWRALARG+V+ECEKRG++VE+ER R+E+APTD S EAL P+G G+ E+DA GRLKA LDAKA REG+G E + V ++ ++ +++GR+K K AE + N GKK K G ++ Q++ + +P+ERMEDE+GAL EWS DD+DDEDE+EE +
Sbjct: 1 MAKTGNKATRKMAKKGLLDFTSRVGNKKGKASTAGKSIKGVSFQRDGAA---RSRGGKHGKVRRPQPKAGRHGGRP-EDKAEIKGDDAEKVASQNDEYRGIEEMDVDAFMKSGMFGGE-GEESADEEADLGEEAEDCEDEH---DERKEDETEDIAGEDDGAEDGDEMEEDYGDEEEQLLESEVQAHKAELERLKAKDPEFFRFLEKNDGNLLSFGKDEDGEEDDEEEEEEEEEEEEEEEDLDAGEEAPSPARE--GGAQELTLALLKAIEHSAFEQHSLKALRRLVLAFKAASHMADESSRQAPGEQAFSIASSSVFDRLLVTCLTRLPDAFGHHLFQNPQYSALDPAPFAKLQGLPAFRSLRPALYRSLKALHYLLGQITEPSLLTFTLSRLERFLPFLVLFPRLAKFYLRTLLSLWAASEALDVKLVAFLRVRQAATVLPFPFLEHCLKGAYLSYARNAKFVSEASLPGLTLMGNGLVELYGLDLASAYQHAFVYVRQLALHLRAAYTKKTPEALQKVQCWQYLNCCKVWVAVLTAHVAPDPGSDKAPS-----QLRELVFPLAQILLGAVRLTPSARLYPLTLHCLTLLQRLAARAQVFIPCAAPCLSMLEDPALSKKPKPSTEAPPSLALALKLPGKAGLEAKNVQEALVDGCMDVLSQEILVYRYALAFPEYAYPIKDRLRRFAK--TTRNARWRALARGLVEECEKRGRYVERERARKEMAPTDAASLEALRPRGEGKGENKEELDAAGRLKAFLDAKAAREGVGVE-VLEVGVKKGSSGPLHGKEEAGEKRGREKKKGEAAESKTGRGAN-GKKEGKLGQQR----QEEWEKIPIERMEDEVGALHEWSEEERESTGGDAEEEGEEEDDEDDEDEDEEDGD 866
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO17G01080.1 ID=NO17G01080.1|Name=NO17G01080.1|organism=Nannochloropsis oceanica|type=mRNA|length=5757bp
TCCCCCCCTCCCTGTCCCTCCGGCAAGGCCTCTTTCATTGACACCATGGG
TACCTTAATCCTCCTCAATTTACTTGTAAATTCGGGATTGAACGTAAATG
TAGCATCGTCACTTACTCCCTTTCCCTTGGTGGTCTTCCGCAGGATCCGG
TGCTTGTTCGTGCTGATCGAGATCAGATTCCGTCTCAATTCATTCTCAGG
GATCTGAGTTGCCTTGTGGATCTCGTCGTAGGACAACGAATCTCGCTCGT
TGAACAGCATCAAAATACACATCGAGTACGTGTGCACCTGCAAGTCATGC
TTTCGGCCCCCGGAAAATGTGGCGCGGATATCGGCGTTACCCATGCTACC
CTGCCAGCTTACCTTCCGCCCGTTGTGCTTCTGGTGGTAGAAGGTCTGAA
AAACCGTACAGCAGGCCTGGATCTCCGGGGGGAGGATACAGGTCGTCGGG
CCTTGCGATGGCCAGTACCCCTGGGTGAGCATCGAAACTTCAAGCTCAAC
GCCATTGATTCGATTTACCCCGGCCCTCCGGAATTCGTCCATCGCGTCCT
TGGAGAGCCTCATGTCATTGAACATCCCCTCAAGCTTACTCGTGAAATGG
TACCCGCACTCTGTTTTCAGCTTGGTGATCATCTGCCTTTCAAAGTCATC
ATTGACACTCCTCCCGCCCAACAACCTCTTGGACAAGTGTGTCTTGTAAT
AATTCTCAAACACGTCCTTATCTTGCAAATACTTGAAAATCACAATAAAT
TTGTTTAAGGCCACATCCGCCTCCTCCTCCCCCATGCCCTTCAACCCGCA
CTTGAGCAGATCATCCACATACAACGCCAAAAACATGGCGCATCGCGTAT
CCATGTTAATGAAGTCTTCGAACGCCTCCTGCAACTTCTTCTGCGCCACT
TTCTCCCCCCCAAAACTCTCATGGACTATTCTATCAAACTTATCCCTCAT
CTCCAGAAGACTCTTCACAAAAACCACCGGATCCCGCTCCCTCTCCTGGT
CCGCCACCAACGCCCTCCCGGCCGCCTTCACATATTCACTCATCGCACCC
CTCAGCTCCTCCAACGTCGCCGGTACCCGCACAAACAACTCATACATCCT
CTTCAAGTCCTCTACTTTGTTGTCACGAAACATGGCCTTGCACCCCGACC
CCTCCATCTCCACCAAAGTGGTCGCATGCGCTTTCACCAGCTCCTCCTCA
ACGATGACCCTCAGCTTCCCCTCCGTGCTCCGATCGAGATAATTCATCAC
CCTTCCCTGCTCCTCCAGCAGCCGATCCTCCGCCTTCATCATGTACACCG
GGCACGTATTCTTACTAATCACATCCTGGCTTTCGGCGCGGTAGAAAGCC
CGCGTCGTTTCCAAGAACGCCCTCTCAAAGTCCTCTTCGTAGACTCGTGT
CCCCTGGATGCCCAGATCAACCAGCATCGATAATGTCCCTCTCAACAAAC
TCCTATCCACCAACTGTCCCTCCCGTTCTGCCTTGATATTCGCGAGTAGC
AACATCTGCAAGCGATCCTTTACCAACGGATGCCTCGCAATCGAGTTTCT
GAAATTCTGCAACCCCAAATCATATACCTTAATCTTGTTATGCTGAGGCA
CGTACGTCCTGTCCATGTACATCAAAATATCTCTCACCATGTTCATGGTC
ACTCGGTGGTCGCCCCATCGGTCCGCCACCTCCTCCAAAAGCCTCTCGTC
TGGGGTAGTGGCAATGGCAGTGCTGACTGAGGTCAGGTAGGCCTGCACGG
AAGATTTCACGCCTTGATAGAGTAATTCCGCGTGTTTATGAAGGACGAGG
TTATAAGCATTGCGATAGAGATGCTCGAAGGAGAGGTTGCTGGCATTCTT
TTTGAAGATCTCGTCAATGGCCCCGGAAAGCTCGGCCCAAACGCTGGTGG
CTTTCGCACGATCCATTTGTGTATGTTGTTTGTAGGGCTTGATGACAAAT
TTTTTGCTGGTCGCCGCCATGGTGATAAGGAGGGGAGAAAGGATAGGCCG
ACTGTTGATGCTGTTACTGAGCTGAGATGTGCAAAAAAGGGGAGGAGAGA
GGCTGGGGCCAGAAAGACGGAGGGAGGGAAGGAAAAGACCACCCGCGGGG
CTTGTGTGGGCGGACAAGGCTGCTCTTTTCGCGCGCAACTAGCGTGTGGC
ATGTGAGTGTGTGTGGTGTGTTAGAAAGGTGAGAAAGTGTGTTGATGAGA
ATGTACGTGTGCTGCACGCTATGCAAGCAGTTGCACTTTTAAATGCCAGC
TCTGCGATATGCAATTCTTCTCCTCCATTTCATCGCCCTTCTCCTGATGA
GCGCTCTTGTCTCCATGCTCATGCTGGTGATTACAAGCCGCATTTATGTG
AGCGCATGAATTAAGGCTCAGAAGAGGAGTGACACCCTCATGCAGGAATT
CGTCCGCGCTTTTAGTCGCGCCTCAAAACCAGCGACCGGGTCCCCATCAC
CATCTGATCCTAAATCTATCTATACAGCGCAACGTACGCGGCACGTCCAA
AGTAAATTGACGCCGGGAGGAGGGTTGCAGCCGTGGCTTCCTTCCTTCCG
GGGCCGAAGTTCTTCTCTCCAATTGATTCTACACCACCGTCAGGCGTGAT
CAAACTCCGCACATCCAACCCTGCCGCCACCGAAGACGCAGGGCACTATT
GCTAGCGTATTCGTTAGGGGGTGCGGTGACTTGGTGCTCGATGGTGTGAG
CGTGAGATTAACTTAAAAGGGAGAGGTAGGGCCAGAGGGAGGAGGTGAGG
CAGGCGAAGAACGAACTTCGAAAGTTGTGCAGACCGGCCAGTGCCACGAA
ACTTCTCTGCCCTCCATCTTCACAACCTGCAAACGCAATTGTTTTGGAGT
GCTTTTTCCTGTGGCTTGAACATATACCTTACACATATGTCTTTTAACTT
CTCCCTCTATGTCAAGCCATACTTCCCTTACCCAGTGTCCCCTTTTTCGC
ATTCAAGACCACCACCACCAAAGCCAGCAACCGACCTCCTCACCCCCTAA
AATAAGCCCAAACGGGAATGGCAAAGACCGGCAATAAGGCCACGCGCAAG
CTGGCCAAGAAGGGTCTGCTTGACTTCACTTCACGAGTGGGCAGCAAGAA
GGGCAAAGGGGGTGGTATGGTGGGTAAGGGTGGAACTGCAAAGGCGATGC
GTGATGGCCCGGCCGCAACGGGGCACTCCAAGGGTGGCAAGCGTGGTGGG
AGTAAGCCTCTTCAGAAGAGTAGCGGCATGAAACGTCCCGGCGCAGATAA
GGGAGGAGTGGATGAAGAGGACGATAAGGAGGCGCTGGCGGAGCGGGAAG
ACCGAGATGGAATTGAGGAGATGGATGTAGATGATTTCATGAAGAGTGGC
ATGTTTGGTGGGGAGGACGGGGAAGATAGTGCAGAGGAGGAGGAGGAGGA
GGAGGAGGAGGATGACGAAGAGGAGGAAAAGTGGGGGTCGGAACAAGGAG
AAGACGACAATGACGATGAGGGGAAGATGGATCAGGACGATGCGGAGGAA
GACGAAGAGGAGCAGGAGGAGGTGGATGAAGAGGAAAAAATGCTGGAGGA
TGAGGTGAAACAGCACAAGGCAGAACTGGAGAGGCTTAAGGCCAAAGACC
CTGATTTTTTTAAGTTTTTGGAGAAGAATGATGGGAACTTGCTCTCTTTC
GGGCAAAACGACGAGGAGGATAAAGAAGAGGAGGCCAACGCAGGAGGGGA
TGACGACGAGGGAGAGGAGGAGGACGAGGAGGAAGGGGATCCGACTACCC
CCACGACGATAGAGGAAGACGTTGGGGTACCCAAGGAGCTGACGTTGGCG
TTGCTCAAGACCATCGAGCACGCAGCACTGGAGCAACATTCCTTGAAAGG
CCTGCGGAAGTTGGTACTGGCGTTTAAGGCTGCGAGTCACATGGCGGATG
AGAGCAGCCGACACGGCCCGAGTCAACAGGCATACACCATTGCCTCTTCC
AGCGTGTTTGACCGGCTGCTTGTCACTTGTCTCACATCCCTACCCGAGGC
CTTCGGACACCACTTGTTCCAGAATCCTGATTACTCCGCTGTGGACCCGG
CCCCCTTTGCCAAGCTGGGGAGCATCCCAGCGTTCCGCTCCCTGCGGCCC
ATGACCTACCGGTCATTGAAGGCGCTCCACTATCTCCTGGGGCAAGTGAC
GGAAGCCTCCCTTCTCTCCTTCCTCCTCTCCCGCCTGGAGCGATTTTTGC
CCTTCCTCATTCCCTTCCCTCGCCTTGCCAAGTTTTACCTTAAGACCCTT
CTCTCCCTCTGGGCGACCAGCGAAGCTCTCGACGTCAAGCTTTCCTCCTT
CCTCCGGATTCGACAAGCCGCCACCGTCCTCCCCTTTCCCTTTCTCGAGG
ACTGCCTCAAAGGCATCTACCTCGCTTACGCGCGCAACGCCAAATTTGTC
ACAGAAACATCCTTGCCAGGACTCACCCTCATGGGTAACTGCGTGGTAGA
GCTTTACGGCCTCGATATGACCAGCGCATACCAACATGCCTTTGTCTACC
TGCGCCAACTGGCCCTGCACCTCCGTGCCGCCTACACGAAAAAAACGGCG
GAGGCCCTCCAGAAAGTCTACTGCTGGCAGTTTCTCAATTGTTGCAAAGT
GTGGGTCGCCGTTTTAACGGCCTACCCCTCCCTCCCTCCCTCGTCCTCTT
CCTCCTCTTCCGAGCAACAACAACAAGAGCTCTCCGAGCTCATTTTTCCC
CTTGCCCAAATTCTTATCGGCATGATCAAACTTGCCCCCTCCGCCCGTCA
TTACCCCCTTGCCCTCCATGCCCTTACCCTCCTTCAACGCCTCGCCGCCC
GGGCGCACGTCTTCATCCCCTGTGCCTCCTTCTGCCTCGATATGCTGGAA
AATCCTGCCTTCCACAAGAAGGCCAAACCCACCACCGACCCTCCCCCCTC
CCTTCTCCTCCTCCTCAAGCTCACCGGCAAAAGCGGCATCGAATTCAAAA
ATGTCCAAGAGTCGCTCGTGACCGAGTGCATGGACGTGTTGACCCAAGAA
ATCCTCATTTATCGCTACACGATCGCCCTACCTGAATACGTCTTTCCTAT
CAAGGAGCGCCTCAAAAGGTGGGCCAAAAAAAGCACCCACCAAAACGCCC
GCTGGCGTGCTCTGGCCAGGGGGATAGTGGACGAATGTGAAAAGAGGGGG
AAGTGGGTAGAGAAGGAGAGGATGAGGAGAGAGATAGCACCCACGGACAA
AACAAGTTTTGAGGCATTGTTCCCTCAGGGGGCAGGAAGGGAAGGAGGAG
AGATGGATGCGGGGGGGAGATTAAAAGCTTCTTTGGATGCAAAGGCGTTG
AGGGAGGGATTGGGAGGGGAAGACGCGATGTTAGTGCAGCAGCAGCAGCG
ACAACAACAACAAGCCCAGAAACAGCAGCTGCAGCATAAAGAGAAGGGAA
GGAAGAAGGTCAAGACTGGCTTGGCTGAAGGTGAAGATGAGGCGGAGAAG
AATGTGGGGAAGAAAGGAGATAAAAAAGGAGGAGAAAAGCAGCATCATCA
GCAACAGCAGCAGCAGGGCGTGCCTGTTGAGCGGATGGAAGACGAGATAG
GGGCTTTGGGTGAATGGAGTGATGATGATGATGATGAGGATGAGGAGGAG
GAGCCGAGTGAAGGTGACAGCGTGTGAGAAAGGAGACAATTGAGACGTAA
ATATCTGAAAGATGAAAACGTATGTGGCTGTGTCTGCGCTGTGTTGTGTG
TATGGAGAGAAAAGAAGATCAAATGAAAGTTAAGCAAAGTAAGTCCCTTT
TTCCCCA back to topprotein sequence of NO17G01080.1 >NO17G01080.1-protein ID=NO17G01080.1-protein|Name=NO17G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=870bp
MAKTGNKATRKLAKKGLLDFTSRVGSKKGKGGGMVGKGGTAKAMRDGPAA
TGHSKGGKRGGSKPLQKSSGMKRPGADKGGVDEEDDKEALAEREDRDGIE
EMDVDDFMKSGMFGGEDGEDSAEEEEEEEEEDDEEEEKWGSEQGEDDNDD
EGKMDQDDAEEDEEEQEEVDEEEKMLEDEVKQHKAELERLKAKDPDFFKF
LEKNDGNLLSFGQNDEEDKEEEANAGGDDDEGEEEDEEEGDPTTPTTIEE
DVGVPKELTLALLKTIEHAALEQHSLKGLRKLVLAFKAASHMADESSRHG
PSQQAYTIASSSVFDRLLVTCLTSLPEAFGHHLFQNPDYSAVDPAPFAKL
GSIPAFRSLRPMTYRSLKALHYLLGQVTEASLLSFLLSRLERFLPFLIPF
PRLAKFYLKTLLSLWATSEALDVKLSSFLRIRQAATVLPFPFLEDCLKGI
YLAYARNAKFVTETSLPGLTLMGNCVVELYGLDMTSAYQHAFVYLRQLAL
HLRAAYTKKTAEALQKVYCWQFLNCCKVWVAVLTAYPSLPPSSSSSSSEQ
QQQELSELIFPLAQILIGMIKLAPSARHYPLALHALTLLQRLAARAHVFI
PCASFCLDMLENPAFHKKAKPTTDPPPSLLLLLKLTGKSGIEFKNVQESL
VTECMDVLTQEILIYRYTIALPEYVFPIKERLKRWAKKSTHQNARWRALA
RGIVDECEKRGKWVEKERMRREIAPTDKTSFEALFPQGAGREGGEMDAGG
RLKASLDAKALREGLGGEDAMLVQQQQRQQQQAQKQQLQHKEKGRKKVKT
GLAEGEDEAEKNVGKKGDKKGGEKQHHQQQQQQGVPVERMEDEIGALGEW
SDDDDDEDEEEEPSEGDSV* back to topmRNA from alignment at chr17:337827..343696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO17G01080.1 ID=NO17G01080.1|Name=NO17G01080.1|organism=Nannochloropsis oceanica|type=mRNA|length=5870bp|location=Sequence derived from alignment at chr17:337827..343696- (Nannochloropsis oceanica)
TCCCCCCCTCCCTGTCCCTCCGGCAAGGCCTCTTTCATTGACACCATGGG
TACCTTAATCCTCCTCAATTTACTTGTAAATTCGGGATTGAACGTAAATG
TAGCATCGTCACTTACTCCCTTTCCCTTGGTGGTCTTCCGCAGGATCCGG
TGCTTGTTCGTGCTGATCGAGATCAGATTCCGTCTCAATTCATTCTCAGG
GATCTGAGTTGCCTTGTGGATCTCGTCGTAGGACAACGAATCTCGCTCGT
TGAACAGCATCAAAATACACATCGAGTACGTGTGCACCTGCAAGTCATGC
TTTCGGCCCCCGGAAAATGTGGCGCGGATATCGGCGTTACCCATGCTACC
CTGCCAGCTTACCTTCCGCCCGTTGTGCTTCTGGTGGTAGAAGGTCTGAA
AAACCGTACAGCAGGCCTGGATCTCCGGGGGGAGGATACAGGTCGTCGGG
CCTTGCGATGGCCAGTACCCCTGGGTGAGCATCGAAACTTCAAGCTCAAC
GCCATTGATTCGATTTACCCCGGCCCTCCGGAATTCGTCCATCGCGTCCT
TGGAGAGCCTCATGTCATTGAACATCCCCTCAAGCTTACTCGTGAAATGG
TACCCGCACTCTGTTTTCAGCTTGGTGATCATCTGCCTTTCAAAGTCATC
ATTGACACTCCTCCCGCCCAACAACCTCTTGGACAAGTGTGTCTTGTAAT
AATTCTCAAACACGTCCTTATCTTGCAAATACTTGAAAATCACAATAAAT
TTGTTTAAGGCCACATCCGCCTCCTCCTCCCCCATGCCCTTCAACCCGCA
CTTGAGCAGATCATCCACATACAACGCCAAAAACATGGCGCATCGCGTAT
CCATGTTAATGAAGTCTTCGAACGCCTCCTGCAACTTCTTCTGCGCCACT
TTCTCCCCCCCAAAACTCTCATGGACTATTCTATCAAACTTATCCCTCAT
CTCCAGAAGACTCTTCACAAAAACCACCGGATCCCGCTCCCTCTCCTGGT
CCGCCACCAACGCCCTCCCGGCCGCCTTCACATATTCACTCATCGCACCC
CTCAGCTCCTCCAACGTCGCCGGTACCCGCACAAACAACTCATACATCCT
CTTCAAGTCCTCTACTTTGTTGTCACGAAACATGGCCTTGCACCCCGACC
CCTCCATCTCCACCAAAGTGGTCGCATGCGCTTTCACCAGCTCCTCCTCA
ACGATGACCCTCAGCTTCCCCTCCGTGCTCCGATCGAGATAATTCATCAC
CCTTCCCTGCTCCTCCAGCAGCCGATCCTCCGCCTTCATCATGTACACCG
GGCACGTATTCTTACTAATCACATCCTGGCTTTCGGCGCGGTAGAAAGCC
CGCGTCGTTTCCAAGAACGCCCTCTCAAAGTCCTCTTCGTAGACTCGTGT
CCCCTGGATGCCCAGATCAACCAGCATCGATAATGTCCCTCTCAACAAAC
TCCTATCCACCAACTGTCCCTCCCGTTCTGCCTTGATATTCGCGAGTAGC
AACATCTGCAAGCGATCCTTTACCAACGGATGCCTCGCAATCGAGTTTCT
GAAATTCTGCAACCCCAAATCATATACCTTAATCTTGTTATGCTGAGGCA
CGTACGTCCTGTCCATGTACATCAAAATATCTCTCACCATGTTCATGGTC
ACTCGGTGGTCGCCCCATCGGTCCGCCACCTCCTCCAAAAGCCTCTCGTC
TGGGGTAGTGGCAATGGCAGTGCTGACTGAGGTCAGGTAGGCCTGCACGG
AAGATTTCACGCCTTGATAGAGTAATTCCGCGTGTTTATGAAGGACGAGG
TTATAAGCATTGCGATAGAGATGCTCGAAGGAGAGGTTGCTGGCATTCTT
TTTGAAGATCTCGTCAATGGCCCCGGAAAGCTCGGCCCAAACGCTGGTGG
CTTTCGCACGATCCATTTGTGTATGTTGTTTGTAGGGCTTGATGACAAAT
TTTTTGCTGGTCGCCGCCATGGTGATAAGGAGGGGAGAAAGGATAGGCCG
ACTGTTGATGCTGTTACTGAGCTGAGATGTGCAAAAAAGGGGAGGAGAGA
GGCTGGGGCCAGAAAGACGGAGGGAGGGAAGGAAAAGACCACCCGCGGGG
CTTGTGTGGGCGGACAAGGCTGCTCTTTTCGCGCGCAACTAGCGTGTGGC
ATGTGAGTGTGTGTGGTGTGTTAGAAAGGTGAGAAAGTGTGTTGATGAGA
ATGTACGTGTGCTGCACGCTATGCAAGCAGTTGCACTTTTAAATGCCAGC
TCTGCGATATGCAATTCTTCTCCTCCATTTCATCGCCCTTCTCCTGATGA
GCGCTCTTGTCTCCATGCTCATGCTGGTGATTACAAGCCGCATTTATGTG
AGCGCATGAATTAAGGCTCAGAAGAGGAGTGACACCCTCATGCAGGAATT
CGTCCGCGCTTTTAGTCGCGCCTCAAAACCAGCGACCGGGTCCCCATCAC
CATCTGATCCTAAATCTATCTATACAGCGCAACGTACGCGGCACGTCCAA
AGTAAATTGACGCCGGGAGGAGGGTTGCAGCCGTGGCTTCCTTCCTTCCG
GGGCCGAAGTTCTTCTCTCCAATTGATTCTACACCACCGTCAGGCGTGAT
CAAACTCCGCACATCCAACCCTGCCGCCACCGAAGACGCAGGGCACTATT
GCTAGCGTATTCGTTAGGGGGTGCGGTGACTTGGTGCTCGATGGTGTGAG
CGTGAGATTAACTTAAAAGGGAGAGGTAGGGCCAGAGGGAGGAGGTGAGG
CAGGCGAAGAACGAACTTCGAAAGTTGTGCAGACCGGCCAGTGCCACGAA
ACTTCTCTGCCCTCCATCTTCACAACCTGCAAACGCAATTGTTTTGGAGT
GCTTTTTCCTGTGGCTTGAACATATACCTTACACATATGTCTTTTAACTT
CTCCCTCTATGTCAAGCCATACTTCCCTTACCCAGTGTCCCCTTTTTCGC
ATTCAAGACCACCACCACCAAAGCCAGCAACCGACCTCCTCACCCCCTAA
AATAAGCCCAAACGGGAATGGCAAAGACCGGCAATAAGGCCACGCGCAAG
CTGGCCAAGAAGGGTCTGCTTGACTTCACTTCACGAGGTATGTGTGAGTG
GGCAGGGTTAGGATCGGTTGGAACCCGTGTTCATGCAAAACTGCGAAGAT
ACTTATCTCGAGTGCATTCCCTTACGCCACACCCTCCCCCCAACCATCAG
TGGGCAGCAAGAAGGGCAAAGGGGGTGGTATGGTGGGTAAGGGTGGAACT
GCAAAGGCGATGCGTGATGGCCCGGCCGCAACGGGGCACTCCAAGGGTGG
CAAGCGTGGTGGGAGTAAGCCTCTTCAGAAGAGTAGCGGCATGAAACGTC
CCGGCGCAGATAAGGGAGGAGTGGATGAAGAGGACGATAAGGAGGCGCTG
GCGGAGCGGGAAGACCGAGATGGAATTGAGGAGATGGATGTAGATGATTT
CATGAAGAGTGGCATGTTTGGTGGGGAGGACGGGGAAGATAGTGCAGAGG
AGGAGGAGGAGGAGGAGGAGGAGGATGACGAAGAGGAGGAAAAGTGGGGG
TCGGAACAAGGAGAAGACGACAATGACGATGAGGGGAAGATGGATCAGGA
CGATGCGGAGGAAGACGAAGAGGAGCAGGAGGAGGTGGATGAAGAGGAAA
AAATGCTGGAGGATGAGGTGAAACAGCACAAGGCAGAACTGGAGAGGCTT
AAGGCCAAAGACCCTGATTTTTTTAAGTTTTTGGAGAAGAATGATGGGAA
CTTGCTCTCTTTCGGGCAAAACGACGAGGAGGATAAAGAAGAGGAGGCCA
ACGCAGGAGGGGATGACGACGAGGGAGAGGAGGAGGACGAGGAGGAAGGG
GATCCGACTACCCCCACGACGATAGAGGAAGACGTTGGGGTACCCAAGGA
GCTGACGTTGGCGTTGCTCAAGACCATCGAGCACGCAGCACTGGAGCAAC
ATTCCTTGAAAGGCCTGCGGAAGTTGGTACTGGCGTTTAAGGCTGCGAGT
CACATGGCGGATGAGAGCAGCCGACACGGCCCGAGTCAACAGGCATACAC
CATTGCCTCTTCCAGCGTGTTTGACCGGCTGCTTGTCACTTGTCTCACAT
CCCTACCCGAGGCCTTCGGACACCACTTGTTCCAGAATCCTGATTACTCC
GCTGTGGACCCGGCCCCCTTTGCCAAGCTGGGGAGCATCCCAGCGTTCCG
CTCCCTGCGGCCCATGACCTACCGGTCATTGAAGGCGCTCCACTATCTCC
TGGGGCAAGTGACGGAAGCCTCCCTTCTCTCCTTCCTCCTCTCCCGCCTG
GAGCGATTTTTGCCCTTCCTCATTCCCTTCCCTCGCCTTGCCAAGTTTTA
CCTTAAGACCCTTCTCTCCCTCTGGGCGACCAGCGAAGCTCTCGACGTCA
AGCTTTCCTCCTTCCTCCGGATTCGACAAGCCGCCACCGTCCTCCCCTTT
CCCTTTCTCGAGGACTGCCTCAAAGGCATCTACCTCGCTTACGCGCGCAA
CGCCAAATTTGTCACAGAAACATCCTTGCCAGGACTCACCCTCATGGGTA
ACTGCGTGGTAGAGCTTTACGGCCTCGATATGACCAGCGCATACCAACAT
GCCTTTGTCTACCTGCGCCAACTGGCCCTGCACCTCCGTGCCGCCTACAC
GAAAAAAACGGCGGAGGCCCTCCAGAAAGTCTACTGCTGGCAGTTTCTCA
ATTGTTGCAAAGTGTGGGTCGCCGTTTTAACGGCCTACCCCTCCCTCCCT
CCCTCGTCCTCTTCCTCCTCTTCCGAGCAACAACAACAAGAGCTCTCCGA
GCTCATTTTTCCCCTTGCCCAAATTCTTATCGGCATGATCAAACTTGCCC
CCTCCGCCCGTCATTACCCCCTTGCCCTCCATGCCCTTACCCTCCTTCAA
CGCCTCGCCGCCCGGGCGCACGTCTTCATCCCCTGTGCCTCCTTCTGCCT
CGATATGCTGGAAAATCCTGCCTTCCACAAGAAGGCCAAACCCACCACCG
ACCCTCCCCCCTCCCTTCTCCTCCTCCTCAAGCTCACCGGCAAAAGCGGC
ATCGAATTCAAAAATGTCCAAGAGTCGCTCGTGACCGAGTGCATGGACGT
GTTGACCCAAGAAATCCTCATTTATCGCTACACGATCGCCCTACCTGAAT
ACGTCTTTCCTATCAAGGAGCGCCTCAAAAGGTGGGCCAAAAAAAGCACC
CACCAAAACGCCCGCTGGCGTGCTCTGGCCAGGGGGATAGTGGACGAATG
TGAAAAGAGGGGGAAGTGGGTAGAGAAGGAGAGGATGAGGAGAGAGATAG
CACCCACGGACAAAACAAGTTTTGAGGCATTGTTCCCTCAGGGGGCAGGA
AGGGAAGGAGGAGAGATGGATGCGGGGGGGAGATTAAAAGCTTCTTTGGA
TGCAAAGGCGTTGAGGGAGGGATTGGGAGGGGAAGACGCGATGTTAGTGC
AGCAGCAGCAGCGACAACAACAACAAGCCCAGAAACAGCAGCTGCAGCAT
AAAGAGAAGGGAAGGAAGAAGGTCAAGACTGGCTTGGCTGAAGGTGAAGA
TGAGGCGGAGAAGAATGTGGGGAAGAAAGGAGATAAAAAAGGAGGAGAAA
AGCAGCATCATCAGCAACAGCAGCAGCAGGGCGTGCCTGTTGAGCGGATG
GAAGACGAGATAGGGGCTTTGGGTGAATGGAGTGATGATGATGATGATGA
GGATGAGGAGGAGGAGCCGAGTGAAGGTGACAGCGTGTGAGAAAGGAGAC
AATTGAGACGTAAATATCTGAAAGATGAAAACGTATGTGGCTGTGTCTGC
GCTGTGTTGTGTGTATGGAGAGAAAAGAAGATCAAATGAAAGTTAAGCAA
AGTAAGTCCCTTTTTCCCCA back to topCoding sequence (CDS) from alignment at chr17:337827..343696- >NO17G01080.1 ID=NO17G01080.1|Name=NO17G01080.1|organism=Nannochloropsis oceanica|type=CDS|length=2610bp|location=Sequence derived from alignment at chr17:337827..343696- (Nannochloropsis oceanica)
ATGGCAAAGACCGGCAATAAGGCCACGCGCAAGCTGGCCAAGAAGGGTCT
GCTTGACTTCACTTCACGAGTGGGCAGCAAGAAGGGCAAAGGGGGTGGTA
TGGTGGGTAAGGGTGGAACTGCAAAGGCGATGCGTGATGGCCCGGCCGCA
ACGGGGCACTCCAAGGGTGGCAAGCGTGGTGGGAGTAAGCCTCTTCAGAA
GAGTAGCGGCATGAAACGTCCCGGCGCAGATAAGGGAGGAGTGGATGAAG
AGGACGATAAGGAGGCGCTGGCGGAGCGGGAAGACCGAGATGGAATTGAG
GAGATGGATGTAGATGATTTCATGAAGAGTGGCATGTTTGGTGGGGAGGA
CGGGGAAGATAGTGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGACG
AAGAGGAGGAAAAGTGGGGGTCGGAACAAGGAGAAGACGACAATGACGAT
GAGGGGAAGATGGATCAGGACGATGCGGAGGAAGACGAAGAGGAGCAGGA
GGAGGTGGATGAAGAGGAAAAAATGCTGGAGGATGAGGTGAAACAGCACA
AGGCAGAACTGGAGAGGCTTAAGGCCAAAGACCCTGATTTTTTTAAGTTT
TTGGAGAAGAATGATGGGAACTTGCTCTCTTTCGGGCAAAACGACGAGGA
GGATAAAGAAGAGGAGGCCAACGCAGGAGGGGATGACGACGAGGGAGAGG
AGGAGGACGAGGAGGAAGGGGATCCGACTACCCCCACGACGATAGAGGAA
GACGTTGGGGTACCCAAGGAGCTGACGTTGGCGTTGCTCAAGACCATCGA
GCACGCAGCACTGGAGCAACATTCCTTGAAAGGCCTGCGGAAGTTGGTAC
TGGCGTTTAAGGCTGCGAGTCACATGGCGGATGAGAGCAGCCGACACGGC
CCGAGTCAACAGGCATACACCATTGCCTCTTCCAGCGTGTTTGACCGGCT
GCTTGTCACTTGTCTCACATCCCTACCCGAGGCCTTCGGACACCACTTGT
TCCAGAATCCTGATTACTCCGCTGTGGACCCGGCCCCCTTTGCCAAGCTG
GGGAGCATCCCAGCGTTCCGCTCCCTGCGGCCCATGACCTACCGGTCATT
GAAGGCGCTCCACTATCTCCTGGGGCAAGTGACGGAAGCCTCCCTTCTCT
CCTTCCTCCTCTCCCGCCTGGAGCGATTTTTGCCCTTCCTCATTCCCTTC
CCTCGCCTTGCCAAGTTTTACCTTAAGACCCTTCTCTCCCTCTGGGCGAC
CAGCGAAGCTCTCGACGTCAAGCTTTCCTCCTTCCTCCGGATTCGACAAG
CCGCCACCGTCCTCCCCTTTCCCTTTCTCGAGGACTGCCTCAAAGGCATC
TACCTCGCTTACGCGCGCAACGCCAAATTTGTCACAGAAACATCCTTGCC
AGGACTCACCCTCATGGGTAACTGCGTGGTAGAGCTTTACGGCCTCGATA
TGACCAGCGCATACCAACATGCCTTTGTCTACCTGCGCCAACTGGCCCTG
CACCTCCGTGCCGCCTACACGAAAAAAACGGCGGAGGCCCTCCAGAAAGT
CTACTGCTGGCAGTTTCTCAATTGTTGCAAAGTGTGGGTCGCCGTTTTAA
CGGCCTACCCCTCCCTCCCTCCCTCGTCCTCTTCCTCCTCTTCCGAGCAA
CAACAACAAGAGCTCTCCGAGCTCATTTTTCCCCTTGCCCAAATTCTTAT
CGGCATGATCAAACTTGCCCCCTCCGCCCGTCATTACCCCCTTGCCCTCC
ATGCCCTTACCCTCCTTCAACGCCTCGCCGCCCGGGCGCACGTCTTCATC
CCCTGTGCCTCCTTCTGCCTCGATATGCTGGAAAATCCTGCCTTCCACAA
GAAGGCCAAACCCACCACCGACCCTCCCCCCTCCCTTCTCCTCCTCCTCA
AGCTCACCGGCAAAAGCGGCATCGAATTCAAAAATGTCCAAGAGTCGCTC
GTGACCGAGTGCATGGACGTGTTGACCCAAGAAATCCTCATTTATCGCTA
CACGATCGCCCTACCTGAATACGTCTTTCCTATCAAGGAGCGCCTCAAAA
GGTGGGCCAAAAAAAGCACCCACCAAAACGCCCGCTGGCGTGCTCTGGCC
AGGGGGATAGTGGACGAATGTGAAAAGAGGGGGAAGTGGGTAGAGAAGGA
GAGGATGAGGAGAGAGATAGCACCCACGGACAAAACAAGTTTTGAGGCAT
TGTTCCCTCAGGGGGCAGGAAGGGAAGGAGGAGAGATGGATGCGGGGGGG
AGATTAAAAGCTTCTTTGGATGCAAAGGCGTTGAGGGAGGGATTGGGAGG
GGAAGACGCGATGTTAGTGCAGCAGCAGCAGCGACAACAACAACAAGCCC
AGAAACAGCAGCTGCAGCATAAAGAGAAGGGAAGGAAGAAGGTCAAGACT
GGCTTGGCTGAAGGTGAAGATGAGGCGGAGAAGAATGTGGGGAAGAAAGG
AGATAAAAAAGGAGGAGAAAAGCAGCATCATCAGCAACAGCAGCAGCAGG
GCGTGCCTGTTGAGCGGATGGAAGACGAGATAGGGGCTTTGGGTGAATGG
AGTGATGATGATGATGATGAGGATGAGGAGGAGGAGCCGAGTGAAGGTGA
CAGCGTGTGA back to top
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