NO16G03090.1, NO16G03090.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G03090.1
Unique Name	NO16G03090.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3459
Alignment location	chr16:914099..918621 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:914099..918621 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G03090.1 vs.
Match: XP_009822373.1 (SCY1 protein kinase [Aphanomyces astaci]; ETV87510.1 SCY1 protein kinase [Aphanomyces astaci])

HSP 1 Score: 274.6 bits (701), Expect = 1.300e-69
Identity = 204/586 (34.81%), Postives = 304/586 (51.88%), Query Frame = 0

Query:    1 MGNELTKKYDKDKIHTASGGHECLWKIYQARVKSTEEQVSVFVLDLDDFKGLPKNEREQLFDIYRKDIRALREMNHPSILKVLDVLEENKKCLAFVAERVSFSLANALHRFQNLPATGQPLPRELVEYRATEMEAGRGLCHIAEALQHTHFVSRRLHLGVAPESIFLTPQGVWKLGGFGFSITLAPSETGPNMQVLCPFYQSAALRKAGGYRLEPHLSYTAPEITAPGTSRISYSADAFSLALLAIEAFQLPSLVGPSSSLPPFLALPPYASPSDQHHRLQEILALPPSLPPSLPSSLHEPVTLLLSLSPALRPDAGSLTQASFFHAGPLAILRDLDTLPSLPPSLAPSLLAGLPDKLSLFPPRLQKEAILPPALAAAKAAPALWVHVIPLIIQVVQNQPSSPSPSSSLPSSSSFSSSSSSLPSSPASILLQTSLLPALSLRPALPPVLLLLSQHLPFLLHHLPRPFVLLHVLPPSLLLPLESNLPPLEDQALKHLADPAIHSAVGNGTMLDEILPRIGRIIVNTPHVSVRVNAVVCLSKTLHCYGKKVLSEALLPTLRVCLERDKTPPVVMAVVGCYDLILKEVG 587
            +G E  K Y+  +  TASGGHE LWKIY A  + T  +VSVFV D  D   +   +R  + D+ R+D++ LR + HP ILK+ +V EE +K L+FV ERV+ SLANA   F N+ A   P   E++E   +E E   GL H+ E+L   H   RR+HL + P SIF+TP+G WKLGGFGF   + P +T  +        +      A G   EP L Y APE+     S  + SAD FSL LL +E F  P    P  +  P L            H  +     P +    +P +LH  +  LL L+P+ RP+A +   + FF +G +  LR L TL    P+     L  LPD L+ F PR+ ++ +LP  L +    P +   VI  +++VV           S+   S+F+ S + +            L+P L +   +  +L+ +S +L  L+      ++  H++P  L   L+S +P + D  L  + D A  S      +   ILPR+ R+I++ P +SVRVNA++ L+K+ H + K +L +++LP L  CL +DKTP V M ++GCYD + K +G
Sbjct:   29 LGEEYEKGYEMPRDSTASGGHELLWKIYPAVSRKTGVEVSVFVFDKKDLDKVQNKDR--VLDVLRQDMKTLRVLRHPQILKIEEVFEETRKTLSFVTERVTCSLANACKNFANV-ANVTP---EVLEIGLSEFEIACGLMHVGESLSFLHREGRRVHLNLTPSSIFITPKGEWKLGGFGFCRVVEPGQTSRSEYYAAGGVEPLKKGMAFG-NYEPQLEYCAPELITEPRS-FNSSADMFSLGLLVLELFSPPK---PDGTHEPALG---QLEGKVMTHGYKTQSLHPMTFNSLVPVTLHNTIRTLLQLTPSGRPEARAFLSSPFFDSGLVKTLRTLQTLVEQDPASQAKFLQSLPDILTGFSPRVLRDMVLP-GLQSVVINPPVAPFVITPLLKVV-----------SMVDKSTFARSIAPM------------LVPLLQITEPVQCMLMFVS-NLETLIPKADDGYIRDHIVP-MLCRSLDSTVPEILDTVLNKIVDQA--SLFEYRILKQVILPRVTRLILDPPQLSVRVNALLWLAKSFHVFDKDLLIDSVLPCLSECLVKDKTPAVCMCILGCYDNLGKHLG 572

The following BLAST results are available for this feature:

BLAST of NO16G03090.1 vs.

BLAST of NO16G03090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_009822373.1	1.300e-69	34.81	SCY1 protein kinase [Aphanomyces astaci]; ETV87510...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G03090	NO16G03090	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G03090.1	NO16G03090.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G03090.1.cds1	NO16G03090.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds2	NO16G03090.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds3	NO16G03090.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds4	NO16G03090.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds5	NO16G03090.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds6	NO16G03090.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds7	NO16G03090.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03090.1.cds8	NO16G03090.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:914099..918621-
coding sequence from alignment at chr16:914099..918621-

mRNA sequence

>NO16G03090.1 ID=NO16G03090.1|Name=NO16G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=3459bp
ATGGGGAACGAACTGACCAAGAAATATGACAAGGATAAGATTCACACGGC
CTCGGGAGGGCATGAGTGCCTTTGGAAAATCTATCAGGCCAGAGTCAAAA
GCACGGAGGAACAGGTCTCTGTCTTTGTCCTGGACCTGGACGACTTCAAA
GGCCTGCCCAAAAATGAACGGGAACAACTTTTTGACATCTACAGAAAGGA
CATTCGCGCCTTACGTGAGATGAACCATCCCTCTATCCTCAAGGTCTTGG
ACGTGCTGGAAGAGAACAAGAAATGCCTGGCTTTCGTGGCGGAACGTGTC
TCTTTCTCATTGGCGAACGCTCTGCATCGATTTCAAAACTTGCCCGCGAC
CGGCCAGCCGTTACCGAGAGAGCTCGTCGAGTACAGGGCCACCGAGATGG
AAGCCGGCCGTGGGCTGTGCCATATCGCCGAGGCCTTACAACACACGCAT
TTCGTCAGTCGCCGGCTTCACTTGGGAGTAGCGCCTGAATCAATTTTCCT
CACTCCTCAAGGCGTATGGAAGCTGGGCGGATTCGGCTTCTCGATTACTT
TGGCGCCCAGCGAGACTGGCCCCAATATGCAAGTCCTCTGCCCCTTCTAC
CAGAGCGCGGCTTTGCGTAAAGCTGGCGGATACCGCTTGGAGCCTCACCT
CTCCTACACTGCACCGGAGATAACGGCTCCGGGCACTTCGCGCATTTCCT
ACAGCGCCGATGCCTTTTCCTTGGCACTCCTGGCCATAGAGGCCTTCCAA
CTCCCCTCCCTCGTCGGTCCCTCCTCCTCCCTCCCTCCCTTCCTCGCCCT
CCCCCCCTATGCCAGCCCCTCCGACCAGCACCACCGCCTCCAAGAGATCC
TTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTCCTCCCTCCACGAG
CCTGTCACCCTCCTCCTCTCCCTCTCTCCCGCCCTCCGCCCGGATGCCGG
CTCCCTCACTCAAGCCTCCTTCTTCCACGCGGGTCCCCTTGCCATCCTTC
GCGATCTCGACACCCTCCCCTCCCTCCCTCCTTCCCTCGCCCCCTCCCTC
CTCGCGGGCCTTCCCGACAAGCTCTCTCTCTTTCCTCCTCGTCTGCAGAA
GGAGGCCATCCTCCCCCCCGCCCTCGCTGCTGCCAAGGCAGCGCCAGCCC
TATGGGTGCACGTCATCCCGCTCATCATCCAGGTCGTCCAAAATCAACCT
TCCTCCCCCTCCCCCTCCTCCTCCCTTCCCTCATCGTCTTCTTTTTCCTC
CTCCTCCTCCTCCCTCCCTTCCTCCCCGGCCTCCATCCTCCTCCAAACCT
CCCTCCTTCCCGCCCTCTCCCTCCGCCCCGCCCTCCCTCCGGTCCTCCTC
CTCCTCAGCCAACACCTCCCCTTCCTCCTCCATCACCTCCCCCGGCCCTT
CGTCCTCCTCCACGTCCTCCCTCCCTCCCTCCTCCTCCCTCTCGAGTCCA
ACCTCCCCCCCCTTGAAGACCAAGCGCTGAAGCATTTGGCGGATCCTGCC
ATTCATTCCGCCGTAGGCAACGGGACGATGCTCGACGAAATCCTCCCTCG
TATAGGGAGAATCATCGTCAACACTCCTCACGTCTCAGTGCGTGTCAATG
CAGTCGTCTGCCTGAGCAAGACGTTGCACTGCTATGGCAAGAAGGTCCTG
TCCGAAGCCCTTCTTCCCACCCTCCGGGTATGCTTGGAGAGGGACAAGAC
CCCGCCGGTGGTCATGGCCGTCGTGGGGTGTTACGATCTCATATTGAAGG
AAGTGGGTGATGTGGAGGTAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGC
AGGGATGGCGAGAACAGGAGTGAAGAAGAATGGAGCACCTGGTGGTGGAG
TCGGAGCCGTGCTTGTCGTGACCGACTTGCAGCATCCCCGGCCAACCCCC
CCTCCTCCCTCCCTCCATTCCGTTTTAAGACTATCTGCACACAGGTCCTA
CCCGTTCTCCTCCCCCTCCTCTCCCTCCGCTCCCTCTCTTCCTCTCAATT
CGACCGAGTGGCCCATAAAATCCAATCCCTCCTTGCCAAGGCCATCGAGA
GCCGGCGGGGAGAGATGGGAGGAGGAAGGGAGGGTAGGAGGGAGGGAGGG
CGGGCGGTGTCACCCGGGTATGATGAATTGACGTTTGCGAGCGGTGCCGC
GAATGCATTAATTTTGCAGCAAGGAGGTGATGGAGGAGGAGGAGGAGGTG
GAAGGGTGAATGATTTCACTGGTGCAGCTGCTGCTGCTGCCTCCTCCTCC
TCCCCTCCCTCCTCCTCCATCACCGATCCGCTCGAAGATTGGTCATGGTT
GAAGCAAACCCTCCCTCCCGCCGTCTCTGCCCCTCCTCCCTCCCTCCCTC
CCTCCACCGGGGCCTTTGACCCGGGCGGCGGGCCTAAATATGATGCTGGC
GCTAATCCCTATAGGATTGACTTCCCCTCGTCCTCTTCTTCCATTGCCTC
TTCACCAGCCCTTCCGCCATTAAAACCTGCTTCCTCTCAGCGGAAACAGC
CTTCTTCCCCCACCTCCTTTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCTTCCTCCTCCACCATCATTGCGGCAACCGGTCGGCC
CCGTCTGGCACGCGTTCCGTCCCCTTCCTCCCTTACGTCCTCCTCCCCTC
CTTCCTCATCCTCGTCCATGTTTGATGGCCTCAAGCGGTCCCCGTTGTCG
GGCCCTCAACGATCCGGGAGCAGTGGAGGAGGAGGAGGAGAAGGAGGAGG
AGGAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGTAAACCCCTCGACGG
CCACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTCTTTCTTCTTCGCTT
CCTCATTCAACCACGGTAATGATGGGAGGTAAAGGAGGAGGAGGAGGGGA
GGGGGGAAGAGGAAGAGCAGGATCAGGAGCAGGAGCAGGAGCGGGAGAAG
GGGTCGGGGGAGGAGTGGGAGGGCAGCAGCATTTAATGGGAGAGTTGTCC
TCTTCCTTCCCATTCATTGAACCACAGCGAGGTCAGCAGCAGCAGCAGCA
GCCATCACATTCACAAACAGGATCGAACTCCTTCTTGGCTCCGATTCAGC
CTATCCCTGTACATCAATTTGGAAGGGGGAAAGGTCGTGGGAGCTATCCA
CAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAAATATGGGAGGGTACGA
TCCAATGAGTGCATTTGATGGGCTTGACGGTGGTGCATCTGGCGGAGGAG
GAGGAGGTGGGACAGGAGGACAGCCAGCACAAGGACAGGGACAGAGAGGA
GGAGGGTGGTGAGTGTACTTTTAATGAAAATCGAAGAAAATTAGGCAAGC
GATTATTTAATGTAAAAAGACGTAAAGCCATGTGCATACAAAAGACAAGG
ATGAGCACTTAAGTACATTGACTGACCACAAAGAAGAAATGGACCATGAT
TGTCACCGA

protein sequence of NO16G03090.1

>NO16G03090.1-protein ID=NO16G03090.1-protein|Name=NO16G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1104bp
MGNELTKKYDKDKIHTASGGHECLWKIYQARVKSTEEQVSVFVLDLDDFK
GLPKNEREQLFDIYRKDIRALREMNHPSILKVLDVLEENKKCLAFVAERV
SFSLANALHRFQNLPATGQPLPRELVEYRATEMEAGRGLCHIAEALQHTH
FVSRRLHLGVAPESIFLTPQGVWKLGGFGFSITLAPSETGPNMQVLCPFY
QSAALRKAGGYRLEPHLSYTAPEITAPGTSRISYSADAFSLALLAIEAFQ
LPSLVGPSSSLPPFLALPPYASPSDQHHRLQEILALPPSLPPSLPSSLHE
PVTLLLSLSPALRPDAGSLTQASFFHAGPLAILRDLDTLPSLPPSLAPSL
LAGLPDKLSLFPPRLQKEAILPPALAAAKAAPALWVHVIPLIIQVVQNQP
SSPSPSSSLPSSSSFSSSSSSLPSSPASILLQTSLLPALSLRPALPPVLL
LLSQHLPFLLHHLPRPFVLLHVLPPSLLLPLESNLPPLEDQALKHLADPA
IHSAVGNGTMLDEILPRIGRIIVNTPHVSVRVNAVVCLSKTLHCYGKKVL
SEALLPTLRVCLERDKTPPVVMAVVGCYDLILKEVGDVEVGGREGGREGG
RDGENRSEEEWSTWWWSRSRACRDRLAASPANPPSSLPPFRFKTICTQVL
PVLLPLLSLRSLSSSQFDRVAHKIQSLLAKAIESRRGEMGGGREGRREGG
RAVSPGYDELTFASGAANALILQQGGDGGGGGGGRVNDFTGAAAAAASSS
SPPSSSITDPLEDWSWLKQTLPPAVSAPPPSLPPSTGAFDPGGGPKYDAG
ANPYRIDFPSSSSSIASSPALPPLKPASSQRKQPSSPTSFFSSSSSSSSS
SSSSSSSSTIIAATGRPRLARVPSPSSLTSSSPPSSSSSMFDGLKRSPLS
GPQRSGSSGGGGGEGGGGGGGGGLNSDGVNPSTATVLLPVKASVPLSSSL
PHSTTVMMGGKGGGGGEGGRGRAGSGAGAGAGEGVGGGVGGQQHLMGELS
SSFPFIEPQRGQQQQQQPSHSQTGSNSFLAPIQPIPVHQFGRGKGRGSYP
QQQQQQQQQQQNMGGYDPMSAFDGLDGGASGGGGGGGTGGQPAQGQGQRG
GGW*

mRNA from alignment at chr16:914099..918621-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G03090.1 ID=NO16G03090.1|Name=NO16G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=4523bp|location=Sequence derived from alignment at chr16:914099..918621- (Nannochloropsis oceanica)
ATGGGGAACGAACTGACCAAGAAATATGACAAGGATAAGATTCACACGGC
CTCGGGAGGGCATGAGTGCCTTTGGAAAATCTATCAGGCCAGAGTCAAAA
GCACGGAGGAACAGGTACATCCATCCCCCTCGATGCATGTCCTCTCTCCC
TCCCTCCAGCGTGCTCATCCTTCACTCATTGATATTTTGTGTGCCACACT
CCTTGAACCGATCCATATCATTATTACACTCAAGCTCCTCTTCCATTACG
CCCCTTCTTCTCTCCTTCCCGCCGCCCAGGTCTCTGTCTTTGTCCTGGAC
CTGGACGACTTCAAAGGCCTGCCCAAAAATGAACGGGAACAACTTTTTGA
CATCTACAGAAAGGTGCTTGATTGAAGGAATGGAATGGAAAATACATCAG
GATTTCCCCCCCACAAGACTCTCACCTCTCTCCCTCCCTTCCCTCCCTCA
TTCCCTTCCCTTCCCTCCCTCCCTCCCTCTCTCCTCTAGGACATTCGCGC
CTTACGTGAGATGAACCATCCCTCTATCCTCAAGGTCTTGGACGTGCTGG
AAGAGAACAAGAAATGCCTGGCTTTCGTGGCGGAACGTGTCTCTTTCTCA
TTGGCGAACGCTCTGCATCGATTTCAAAACTTGCCCGCGACCGGCCAGCC
GTTACCGAGAGAGCTCGTCGAGTACAGGTGGGTGACTAGGGAGGGAAGGG
AAGGAGAATGGGGAAGGGAGGAGAATAGAAAGGAACAATGGCAATCACAT
AAACGCTCACGGGATTCTCACGCATTTCATCCCCCCTCCCTTCCCTCCTC
CCTTTCCCCCTCCCTCCCTCCCTCAGGGCCACCGAGATGGAAGCCGGCCG
TGGGCTGTGCCATATCGCCGAGGCCTTACAACACACGCATTTCGTCAGTC
GCCGGCTTCACTTGGGAGTAGCGCCTGAATCAATTTTCCTCACTCCTCAA
GGCGTATGGAAGCTGGGCGGATTCGGCTTCTCGATTACTTTGGCGCCCAG
CGAGACTGGTGAGCAATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCCTCATCTTTCATTTCCACGTCTTTATCTGATC
CGTTGAAGTCGCTCCCTCCCTCCCTCCCTCCCTCAGGCCCCAATATGCAA
GTCCTCTGCCCCTTCTACCAGAGCGCGGCTTTGCGTAAAGCTGGCGGATA
CCGCTTGGAGCCTCACCTCTCCTACACTGCACCGGAGGTAGGTGTCCTTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCTT
ATTTCTCTCGCCATTGCCCTGGTAATCCTCTTCCAACCAACCAACCAACC
TCCCTCCCTCCCTCCCTCCTTCCCACCCTCCCTCCCCTCTCCAGATAACG
GCTCCGGGCACTTCGCGCATTTCCTACAGCGCCGATGCCTTTTCCTTGGC
ACTCCTGGCCATAGAGGCCTTCCAACTCCCCTCCCTCGTCGGTCCCTCCT
CCTCCCTCCCTCCCTTCCTCGCCCTCCCCCCCTATGCCAGCCCCTCCGAC
CAGCACCACCGCCTCCAAGAGATCCTTGCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCGTCCTCCCTCCACGAGCCTGTCACCCTCCTCCTCTCCCTCT
CTCCCGCCCTCCGCCCGGATGCCGGCTCCCTCACTCAAGCCTCCTTCTTC
CACGCGGGTCCCCTTGCCATCCTTCGCGATCTCGACACCCTCCCCTCCCT
CCCTCCTTCCCTCGCCCCCTCCCTCCTCGCGGGCCTTCCCGACAAGCTCT
CTCTCTTTCCTCCTCGTCTGCAGAAGGAGGCCATCCTCCCCCCCGCCCTC
GCTGCTGCCAAGGCAGCGCCAGCCCTATGGGTGCACGTCATCCCGCTCAT
CATCCAGGTAGAGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGATAGCCGATAGCCACCAGCCTCG
TTGATGGTCATCAGACTCCTTCCTTCTCAACTTATACCTCTTCCTCCCTC
CCTCCCTCCCTCTCTCCCTCTCTTTCTCCTTCCCTCCTTCCTTCTCTCCT
TCAGGTCGTCCAAAATCAACCTTCCTCCCCCTCCCCCTCCTCCTCCCTTC
CCTCATCGTCTTCTTTTTCCTCCTCCTCCTCCTCCCTCCCTTCCTCCCCG
GCCTCCATCCTCCTCCAAACCTCCCTCCTTCCCGCCCTCTCCCTCCGCCC
CGCCCTCCCTCCGGTCCTCCTCCTCCTCAGCCAACACCTCCCCTTCCTCC
TCCATCACCTCCCCCGGCCCTTCGTCCTCCTCCACGTCCTCCCTCCCTCC
CTCCTCCTCCCTCTCGAGTCCAACCTCCCCCCCCTTGAAGACCAAGCGCT
GAAGCATTTGGCGGATCCTGCCATTCATTCCGCCGTAGGCAACGGGACGA
TGCTCGACGAAATCCTCCCTCGTATAGGGAGAATCATCGTCAACACTCCT
CACGTCTCAGTGCGTGTCAATGCAGTCGTCTGCCTGAGCAAGACGTTGCA
CTGCTATGGCAAGAAGGTAAGCAAGCCAGCCCTTCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCATTGTGATGTATCGGCTACCTCGGCGTTTC
TTCTCAACCGTCCATTCCCCCTCCTTCCCTCCCTCCTTCCCTTCCTCCCC
TCCCTCAGGTCCTGTCCGAAGCCCTTCTTCCCACCCTCCGGGTATGCTTG
GAGAGGGACAAGACCCCGCCGGTGGTCATGGCCGTCGTGGGGTGTTACGA
TCTCATATTGAAGGAAGTGGGTGATGTGGAGGTAGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGCAGGGATGGCGAGAACAGGAGTGAAGAAGAATGGAGC
ACCTGGTGGTGGAGTCGGAGCCGTGCTTGTCGTGACCGACTTGCAGCATC
CCCGGCCAACCCCCCCTCCTCCCTCCCTCCATTCCGTTTTAAGACTATCT
GCACACAGGTCCTACCCGTTCTCCTCCCCCTCCTCTCCCTCCGCTCCCTC
TCTTCCTCTCAATTCGACCGAGTGGCCCATAAAATCCAATCCCTCCTTGC
CAAGGCCATCGAGAGCCGGCGGGGAGAGATGGGAGGAGGAAGGGAGGGTA
GGAGGGAGGGAGGGCGGGCGGTGTCACCCGGGTATGATGAATTGACGTTT
GCGAGCGGTGCCGCGAATGCATTAATTTTGCAGCAAGGAGGTGATGGAGG
AGGAGGAGGAGGTGGAAGGGTGAATGATTTCACTGGTGCAGCTGCTGCTG
CTGCCTCCTCCTCCTCCCCTCCCTCCTCCTCCATCACCGATCCGCTCGAA
GATTGGTCATGGTTGAAGCAAACCCTCCCTCCCGCCGTCTCTGCCCCTCC
TCCCTCCCTCCCTCCCTCCACCGGGGCCTTTGACCCGGGCGGCGGGCCTA
AATATGATGCTGGCGCTAATCCCTATAGGATTGACTTCCCCTCGTCCTCT
TCTTCCATTGCCTCTTCACCAGCCCTTCCGCCATTAAAACCTGCTTCCTC
TCAGCGGAAACAGCCTTCTTCCCCCACCTCCTTTTTCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCACCATCATTGCG
GCAACCGGTCGGCCCCGTCTGGCACGCGTTCCGTCCCCTTCCTCCCTTAC
GTCCTCCTCCCCTCCTTCCTCATCCTCGTCCATGTTTGATGGCCTCAAGC
GGTCCCCGTTGTCGGGCCCTCAACGATCCGGGAGCAGTGGAGGAGGAGGA
GGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGT
AAACCCCTCGACGGCCACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTC
TTTCTTCTTCGCTTCCTCATTCAACCACGGTAATGATGGGAGGTAAAGGA
GGAGGAGGAGGGGAGGGGGGAAGAGGAAGAGCAGGATCAGGAGCAGGAGC
AGGAGCGGGAGAAGGGGTCGGGGGAGGAGTGGGAGGGCAGCAGCATTTAA
TGGGAGAGTTGTCCTCTTCCTTCCCATTCATTGAACCACAGCGAGGTCAG
CAGCAGCAGCAGCAGCCATCACATTCACAAACAGGATCGAACTCCTTCTT
GGCTCCGATTCAGCCTATCCCTGTACATCAATTTGGAAGGGGGAAAGGTC
GTGGGAGCTATCCACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAAAT
ATGGGAGGGTACGATCCAATGAGTGCATTTGATGGGCTTGACGGTGGTGC
ATCTGGCGGAGGAGGAGGAGGTGGGACAGGAGGACAGCCAGCACAAGGAC
AGGGACAGAGAGGAGGAGGGTGGTGAGTGTACTTTTAATGAAAATCGAAG
AAAATTAGGCAAGCGATTATTTAATGTAAAAAGACGTAAAGCCATGTGCA
TACAAAAGACAAGGATGAGCACTTAAGTACATTGACTGACCACAAAGAAG
AAATGGACCATGATTGTCACCGA

Coding sequence (CDS) from alignment at chr16:914099..918621-

>NO16G03090.1 ID=NO16G03090.1|Name=NO16G03090.1|organism=Nannochloropsis oceanica|type=CDS|length=3312bp|location=Sequence derived from alignment at chr16:914099..918621- (Nannochloropsis oceanica)
ATGGGGAACGAACTGACCAAGAAATATGACAAGGATAAGATTCACACGGC
CTCGGGAGGGCATGAGTGCCTTTGGAAAATCTATCAGGCCAGAGTCAAAA
GCACGGAGGAACAGGTCTCTGTCTTTGTCCTGGACCTGGACGACTTCAAA
GGCCTGCCCAAAAATGAACGGGAACAACTTTTTGACATCTACAGAAAGGA
CATTCGCGCCTTACGTGAGATGAACCATCCCTCTATCCTCAAGGTCTTGG
ACGTGCTGGAAGAGAACAAGAAATGCCTGGCTTTCGTGGCGGAACGTGTC
TCTTTCTCATTGGCGAACGCTCTGCATCGATTTCAAAACTTGCCCGCGAC
CGGCCAGCCGTTACCGAGAGAGCTCGTCGAGTACAGGGCCACCGAGATGG
AAGCCGGCCGTGGGCTGTGCCATATCGCCGAGGCCTTACAACACACGCAT
TTCGTCAGTCGCCGGCTTCACTTGGGAGTAGCGCCTGAATCAATTTTCCT
CACTCCTCAAGGCGTATGGAAGCTGGGCGGATTCGGCTTCTCGATTACTT
TGGCGCCCAGCGAGACTGGCCCCAATATGCAAGTCCTCTGCCCCTTCTAC
CAGAGCGCGGCTTTGCGTAAAGCTGGCGGATACCGCTTGGAGCCTCACCT
CTCCTACACTGCACCGGAGATAACGGCTCCGGGCACTTCGCGCATTTCCT
ACAGCGCCGATGCCTTTTCCTTGGCACTCCTGGCCATAGAGGCCTTCCAA
CTCCCCTCCCTCGTCGGTCCCTCCTCCTCCCTCCCTCCCTTCCTCGCCCT
CCCCCCCTATGCCAGCCCCTCCGACCAGCACCACCGCCTCCAAGAGATCC
TTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTCCTCCCTCCACGAG
CCTGTCACCCTCCTCCTCTCCCTCTCTCCCGCCCTCCGCCCGGATGCCGG
CTCCCTCACTCAAGCCTCCTTCTTCCACGCGGGTCCCCTTGCCATCCTTC
GCGATCTCGACACCCTCCCCTCCCTCCCTCCTTCCCTCGCCCCCTCCCTC
CTCGCGGGCCTTCCCGACAAGCTCTCTCTCTTTCCTCCTCGTCTGCAGAA
GGAGGCCATCCTCCCCCCCGCCCTCGCTGCTGCCAAGGCAGCGCCAGCCC
TATGGGTGCACGTCATCCCGCTCATCATCCAGGTCGTCCAAAATCAACCT
TCCTCCCCCTCCCCCTCCTCCTCCCTTCCCTCATCGTCTTCTTTTTCCTC
CTCCTCCTCCTCCCTCCCTTCCTCCCCGGCCTCCATCCTCCTCCAAACCT
CCCTCCTTCCCGCCCTCTCCCTCCGCCCCGCCCTCCCTCCGGTCCTCCTC
CTCCTCAGCCAACACCTCCCCTTCCTCCTCCATCACCTCCCCCGGCCCTT
CGTCCTCCTCCACGTCCTCCCTCCCTCCCTCCTCCTCCCTCTCGAGTCCA
ACCTCCCCCCCCTTGAAGACCAAGCGCTGAAGCATTTGGCGGATCCTGCC
ATTCATTCCGCCGTAGGCAACGGGACGATGCTCGACGAAATCCTCCCTCG
TATAGGGAGAATCATCGTCAACACTCCTCACGTCTCAGTGCGTGTCAATG
CAGTCGTCTGCCTGAGCAAGACGTTGCACTGCTATGGCAAGAAGGTCCTG
TCCGAAGCCCTTCTTCCCACCCTCCGGGTATGCTTGGAGAGGGACAAGAC
CCCGCCGGTGGTCATGGCCGTCGTGGGGTGTTACGATCTCATATTGAAGG
AAGTGGGTGATGTGGAGGTAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGC
AGGGATGGCGAGAACAGGAGTGAAGAAGAATGGAGCACCTGGTGGTGGAG
TCGGAGCCGTGCTTGTCGTGACCGACTTGCAGCATCCCCGGCCAACCCCC
CCTCCTCCCTCCCTCCATTCCGTTTTAAGACTATCTGCACACAGGTCCTA
CCCGTTCTCCTCCCCCTCCTCTCCCTCCGCTCCCTCTCTTCCTCTCAATT
CGACCGAGTGGCCCATAAAATCCAATCCCTCCTTGCCAAGGCCATCGAGA
GCCGGCGGGGAGAGATGGGAGGAGGAAGGGAGGGTAGGAGGGAGGGAGGG
CGGGCGGTGTCACCCGGGTATGATGAATTGACGTTTGCGAGCGGTGCCGC
GAATGCATTAATTTTGCAGCAAGGAGGTGATGGAGGAGGAGGAGGAGGTG
GAAGGGTGAATGATTTCACTGGTGCAGCTGCTGCTGCTGCCTCCTCCTCC
TCCCCTCCCTCCTCCTCCATCACCGATCCGCTCGAAGATTGGTCATGGTT
GAAGCAAACCCTCCCTCCCGCCGTCTCTGCCCCTCCTCCCTCCCTCCCTC
CCTCCACCGGGGCCTTTGACCCGGGCGGCGGGCCTAAATATGATGCTGGC
GCTAATCCCTATAGGATTGACTTCCCCTCGTCCTCTTCTTCCATTGCCTC
TTCACCAGCCCTTCCGCCATTAAAACCTGCTTCCTCTCAGCGGAAACAGC
CTTCTTCCCCCACCTCCTTTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCTTCCTCCTCCACCATCATTGCGGCAACCGGTCGGCC
CCGTCTGGCACGCGTTCCGTCCCCTTCCTCCCTTACGTCCTCCTCCCCTC
CTTCCTCATCCTCGTCCATGTTTGATGGCCTCAAGCGGTCCCCGTTGTCG
GGCCCTCAACGATCCGGGAGCAGTGGAGGAGGAGGAGGAGAAGGAGGAGG
AGGAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGTAAACCCCTCGACGG
CCACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTCTTTCTTCTTCGCTT
CCTCATTCAACCACGGTAATGATGGGAGGTAAAGGAGGAGGAGGAGGGGA
GGGGGGAAGAGGAAGAGCAGGATCAGGAGCAGGAGCAGGAGCGGGAGAAG
GGGTCGGGGGAGGAGTGGGAGGGCAGCAGCATTTAATGGGAGAGTTGTCC
TCTTCCTTCCCATTCATTGAACCACAGCGAGGTCAGCAGCAGCAGCAGCA
GCCATCACATTCACAAACAGGATCGAACTCCTTCTTGGCTCCGATTCAGC
CTATCCCTGTACATCAATTTGGAAGGGGGAAAGGTCGTGGGAGCTATCCA
CAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAAATATGGGAGGGTACGA
TCCAATGAGTGCATTTGATGGGCTTGACGGTGGTGCATCTGGCGGAGGAG
GAGGAGGTGGGACAGGAGGACAGCCAGCACAAGGACAGGGACAGAGAGGA
GGAGGGTGGTGA

Synonyms

Publications