NO16G02940.1, NO16G02940.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G02940.1
Unique Name	NO16G02940.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3774
Alignment location	chr16:855412..860233 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:855412..860233 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G02940.1 vs.
Match: EWM23812.1 (hypothetical protein Naga_100603g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 100.5 bits (249), Expect = 3.900e-17
Identity = 143/415 (34.46%), Postives = 198/415 (47.71%), Query Frame = 0

Query:  235 SSGRSFS-PTASSPVEKGMAEGKEEGKEEKTLDEGCETSSPATTTDTTSSAVFSSGRRGPRQGQGEVMDHDPYCLHLPCGAVLPASKTATATATAAVVTAAVVTAATAATAAAAVASTSPVSSLSSSSFRPSSFSSSSSSSSSSRSSSSSYSSSRPSSSSSISSISSSSSSSSSSPPFP-------LRLLLVIKDAKRALRLSHAAQETDDKDGFRVEVVRSALQALSRLSVQHYDVVIMEADFPMVDGVAAVRRLRRFEGWLESLRRSDAALPPALGVKQE---EGEASAKPPSFVVLVENAVD------RRSDGSEGGREGG-QGVHSFERRAWRAGADLVVRNFEDVCLTNIRSIVVNAAAAAAAARDKREEKKEREEEKVQAETGLRMDRNGAVVIGMRVTETMIRGREAE 632
            + GRS + P +S     G A G++ G +E+  D   +T S AT+T+  SS+         ++G+   MD  P   H                 TAAV    ++      + A   A   P   +++   RPS FS+S+  SS             P   S++   + S S S   PPFP       LRLLLV++D  +AL L  AAQ       F V+V RS L  L RLS+QH+DVV+ME++  ++ G+ AVRRLR  EG LE L+R  A  P      +E   EG A  KPPSFVVLV           RR  G EGGREGG QG   FE RA++AGAD+VV   EDV    +  +V              EE++  EE + +AE  + +D +  +++  R  E  +RG   E
Sbjct:  123 NKGRSGADPASSDATASGKALGRQAGGQEE--DPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGH---------------GMTAAV--ERLLGPMPVPSGAGVAARHLPSEPIATHRPRPS-FSTSAPPSSERVFP--------PYPDSNVGRSAFSCSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGGREGGAVVKPPSFVVLVGGGSTKDWKRRRREGGREGGREGGRQGGVGFEERAYQAGADMVVMKLEDVRFDRLWRLV------------HGEEEEAEEEAEEEAEEEIWVDEHNHILLESRPGEE-VRGGGVE 496

The following BLAST results are available for this feature:

BLAST of NO16G02940.1 vs.

BLAST of NO16G02940.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM23812.1	3.900e-17	34.46	hypothetical protein Naga_100603g3, partial [Nanno...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G02940	NO16G02940	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G02940.1	NO16G02940.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G02940.1.cds1	NO16G02940.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02940.1.cds2	NO16G02940.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02940.1.cds3	NO16G02940.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02940.1.cds4	NO16G02940.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02940.1.cds5	NO16G02940.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:855412..860233-
coding sequence from alignment at chr16:855412..860233-

mRNA sequence

>NO16G02940.1 ID=NO16G02940.1|Name=NO16G02940.1|organism=Nannochloropsis oceanica|type=mRNA|length=3774bp
ATGATACAAGCCTCCAACATAGAAGCTAGCAAGGGCACCCATACACAAGC
TTTCCCCCTTCCTTCTGCCCCAGTTGTCCCTGGTGATGTCTGCGCCCATT
CTCCCACTGCTTGCTCCTCCTCGTCCTCAACTTCTCATCCCCATGAGAAG
TTTCACGACCTTCAGCAACAGCAGAACTTCACAGCATTAATTGCTTACCA
AATTACAAGGCGTGTGTGTCTGGCTTTGCAGGTCATTGGGGGTGTAGGGC
AGGAAGGGCGAGTAGCAAGGAGAGGAAGCGAGGGACGCGAAGTAGCAGCA
GCAGCAACAATAAAAGGAGGAAGCATAGCAGATGACGTGATAGCTGATGA
AGTGGCCCTCATCAAGCATACTGTGGGTCTACAGCTGAAAGAGGCGCAGC
ATGACCTCGCCGTGTTTGAAGCCAGTTCTTCGCCCCTCCATGCCTCCCTC
CCTTCCTCGTCCTTGTCCTCGTCCTCCCCCCCCGCCTCGGACGCCACCTC
TGCGGCACTTGCAAAGACATTAGGCCGCCTTGACCTCCTTCTTAGCCAGC
TTGAGAGGCTGGGAAGAGAAGGGGGAGGGAAGGAGGGAGGGACTGATTCA
ACGACCCGCTGCGGCAGCAGCAGCAATAACAACAACGTCGACGGCAGCAG
CAGCAATGGCAACAATGGCAGCAGTAGCATAAGAAGGGAGGCACCGCCAG
TCTCTTCAGGTCGCTCCTTCTCCCCCACGGCCTCCTCGCCGGTTGAAAAA
GGTATGGCGGAAGGGAAGGAGGAAGGGAAGGAGGAGAAAACCCTCGATGA
GGGTTGCGAAACGTCTTCGCCGGCGACGACAACAGACACAACGAGCAGCG
CCGTCTTCAGTAGTGGAAGAAGAGGGCCGAGACAAGGACAGGGAGAAGTG
ATGGATCACGACCCCTACTGTCTCCACCTCCCGTGCGGGGCCGTCTTGCC
CGCTTCCAAAACAGCCACAGCAACAGCAACAGCAGCAGTAGTAACAGCAG
CAGTGGTAACAGCAGCAACAGCAGCAACAGCAGCAGCTGCAGTAGCCTCT
ACTTCTCCGGTCTCCTCTCTCTCCTCTTCCTCTTTTCGCCCGTCGTCTTT
TTCCTCCTCCTCGTCCTCCTCCTCCTCCTCTCGTTCATCCTCTTCCTCTT
ATTCCTCCTCTCGTCCCTCCTCCTCTTCTTCCATTTCCTCCATTTCCTCC
TCCTCTTCCTCCTCTTCCTCCTCCCCCCCCTTCCCCCTTCGCCTCCTCCT
TGTCATCAAGGATGCCAAAAGAGCCCTCCGCCTCTCCCACGCTGCACAAG
AAACGGATGACAAGGATGGGTTTAGGGTTGAGGTGGTGCGGTCCGCCCTT
CAAGCCCTGAGTCGTTTAAGTGTCCAGCATTACGACGTTGTGATCATGGA
GGCGGATTTCCCGATGGTTGATGGCGTGGCCGCCGTACGGAGGCTGAGGA
GGTTTGAAGGGTGGCTGGAAAGCCTAAGGAGATCAGATGCCGCCCTCCCT
CCCGCCCTGGGAGTCAAGCAGGAGGAGGGAGAGGCGTCCGCGAAGCCTCC
GTCGTTCGTGGTGCTGGTTGAGAATGCGGTTGATCGCAGATCTGATGGGA
GCGAAGGAGGGAGGGAAGGGGGGCAGGGTGTGCATAGCTTTGAGAGGAGA
GCGTGGAGGGCAGGGGCTGATCTGGTGGTCAGAAATTTTGAAGACGTGTG
CTTGACAAACATTAGGTCGATCGTTGTGAATGCAGCAGCAGCAGCTGCAG
CAGCAAGAGATAAGAGGGAGGAGAAAAAGGAGAGGGAGGAAGAGAAAGTA
CAGGCAGAGACAGGATTGAGGATGGATAGAAACGGTGCAGTGGTGATTGG
GATGAGGGTAACAGAGACGATGATAAGGGGGAGGGAAGCAGAGGAGGAGG
TGCAGCAGCAACAGCAGGAGGATCAGAAAACGAAGGAAGAAGAAAGGAGG
GAGAATAAGTCTGAGGGAGACATGAAGGAGGAGGATTTGCTGGAGTGGGA
GGGGAGGAGGTATGGAGGGGAGGGAGGGAGAGAGGGACCTTCAATGGCGC
TGACTGTTACAGCCCTCGGAGATTTAGAAACGCAGGCATCGGAAACGTGT
CGGTTAGAAAATGGCATCAACACCATCATCCCGGGTAGCAGCAGCAGCAA
CTATTGCCAACGGCAGCAGCAAAAACAGCAGGAGCAGCAGGAGCAAGAGC
AAGAGCAGGAGCAGCAGCAGATTAATCTCCCTACTGCTCCTGCTGTTGCT
ACTGCCACAGCCATGGCTGCAGGACCTACTTCCTCCTTTCCCACTGTGCC
GTCCAACTTGCCCATCGCTTCAGGCGCAGCAACATTGACAGGGGGAGTGT
ATGGGGGAGGAGGAGGACCCGCATGGTCCTTAGAAGGTGGTATCGCACGG
TCCGTATCCTCTCTCACTTTCTCCACTGCTAGCGGCATCAACAGCAGCAG
CAGCAGCAGCAGCAGCAGGGGGGGAGGAAAGGACGGCACCTCGCTCTACT
CTTTCATCCCTCCTTCCGTTTTCTCGACTGCGGCCTTGGGAACAGGTGGA
GGGAGAGGAGGAGCCTTGGCAAGGAAAAGGACATTCATCAAAAGAGAGGA
AGAGGAGCAGCAGGAGCAACAGGAGCAGCAGCAACATCCAAAATTCTCTC
CCCCTCGTCACTCCTCCTCCTTTTCCACTGTCCCCTCCTCCGCCTCCTTC
TCCTCCTCCTCCCATTCCATCATCCTCAACAAGGCACGCCGAGCCTGCGC
GTACTGTCACAACAAGAAGGTCAGCTGTACTTGCACTCGACCCTGCCGTC
GTTGCGTAGATATGAACATCGAATGCGTCGAATACGAGCCACGACCGCGG
AACGCATCTTGGAACAGACGAAAGCGGGCAGGGAGTATGGCCAGCGTCGA
CTCAGAGGGAGTGAAAAGCATTAAATTTCCAGGATCTCCGACGGGACGAC
ACCCGCAGAGCAGGCAGAAGCCAGGGGAAAAATCCGCCAAAACCAACAAC
GGAGTATCACCGTCGTCACCCACAGCGGCAGCAGCGGCAGCAGCGACAGC
AGCAGCGAGAGCAGTAGAAACCCAACAGTATTCCTCGGCCCCAGCCTGCT
CCTCTTCACCCGATATGAAGGCAGCGATGGACAGGATCCCTTCCTCCTCC
TCCTCCTCCTCCTTGGAGAATGACGAGGAAAGGCAGCAGCAGCAACAGCA
CCACCACCACCAGCATCGACAACAACAGCCGCAGGAGAAAGTCTCTTCTC
CCTATCATCACGCCACCGCCGCCTCTTCTGCAGTCACAAGACCCCAAGCA
GCAGCAGCAGCAGCTACACCAGGTCTGACTGCCTCTCTACTTTCCTCTCG
CACCCTCCTCCCCTCCGGAGCAGTCGAAGGACGAGGGGGAGGACTGAGTT
TTGATTGTCCTCCCTCCTACCGTCCCTCCGTCTCAGTCGCCCTTCGCCAG
CAGCAGGAGAAGGTTGTAAGGTTGATGAGGGAGGCGGGAAGGGAGGGAGG
GAGGGAGGGAGGAGTGGGAGGGACCGGGCCGAGGTTTCCCATGCCTGCTC
ATTTGCAGCAGTCTATCACCTCCATGGACCCAGCAGTGCTCAGGATGTGT
GAAGGAGGAAGAGGGGGAGGGAGGGAGGGGGGGAAGGACGGTGGTGGCGA
AGACGCAGAAGAAAGAGCCGGAGCAGGTGGTTTGGAGGTGGGGGGGGAGG
GGGGCAGGGAAGGGGAGGGGGAAGGGGTTGCTTATCTATTGGGGGAGTAT
GATGTGAATCGGTTCTTTGTGTGA

protein sequence of NO16G02940.1

>NO16G02940.1-protein ID=NO16G02940.1-protein|Name=NO16G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1258bp
MIQASNIEASKGTHTQAFPLPSAPVVPGDVCAHSPTACSSSSSTSHPHEK
FHDLQQQQNFTALIAYQITRRVCLALQVIGGVGQEGRVARRGSEGREVAA
AATIKGGSIADDVIADEVALIKHTVGLQLKEAQHDLAVFEASSSPLHASL
PSSSLSSSSPPASDATSAALAKTLGRLDLLLSQLERLGREGGGKEGGTDS
TTRCGSSSNNNNVDGSSSNGNNGSSSIRREAPPVSSGRSFSPTASSPVEK
GMAEGKEEGKEEKTLDEGCETSSPATTTDTTSSAVFSSGRRGPRQGQGEV
MDHDPYCLHLPCGAVLPASKTATATATAAVVTAAVVTAATAATAAAAVAS
TSPVSSLSSSSFRPSSFSSSSSSSSSSRSSSSSYSSSRPSSSSSISSISS
SSSSSSSSPPFPLRLLLVIKDAKRALRLSHAAQETDDKDGFRVEVVRSAL
QALSRLSVQHYDVVIMEADFPMVDGVAAVRRLRRFEGWLESLRRSDAALP
PALGVKQEEGEASAKPPSFVVLVENAVDRRSDGSEGGREGGQGVHSFERR
AWRAGADLVVRNFEDVCLTNIRSIVVNAAAAAAAARDKREEKKEREEEKV
QAETGLRMDRNGAVVIGMRVTETMIRGREAEEEVQQQQQEDQKTKEEERR
ENKSEGDMKEEDLLEWEGRRYGGEGGREGPSMALTVTALGDLETQASETC
RLENGINTIIPGSSSSNYCQRQQQKQQEQQEQEQEQEQQQINLPTAPAVA
TATAMAAGPTSSFPTVPSNLPIASGAATLTGGVYGGGGGPAWSLEGGIAR
SVSSLTFSTASGINSSSSSSSSRGGGKDGTSLYSFIPPSVFSTAALGTGG
GRGGALARKRTFIKREEEEQQEQQEQQQHPKFSPPRHSSSFSTVPSSASF
SSSSHSIILNKARRACAYCHNKKVSCTCTRPCRRCVDMNIECVEYEPRPR
NASWNRRKRAGSMASVDSEGVKSIKFPGSPTGRHPQSRQKPGEKSAKTNN
GVSPSSPTAAAAAAATAAARAVETQQYSSAPACSSSPDMKAAMDRIPSSS
SSSSLENDEERQQQQQHHHHQHRQQQPQEKVSSPYHHATAASSAVTRPQA
AAAAATPGLTASLLSSRTLLPSGAVEGRGGGLSFDCPPSYRPSVSVALRQ
QQEKVVRLMREAGREGGREGGVGGTGPRFPMPAHLQQSITSMDPAVLRMC
EGGRGGGREGGKDGGGEDAEERAGAGGLEVGGEGGREGEGEGVAYLLGEY
DVNRFFV*

mRNA from alignment at chr16:855412..860233-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G02940.1 ID=NO16G02940.1|Name=NO16G02940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4822bp|location=Sequence derived from alignment at chr16:855412..860233- (Nannochloropsis oceanica)
ATGATACAAGCCTCCAACATAGGTTAGTTTGAGTGTGGACAAGGGATGGG
GTTTTTATTTGGAGCGTCTACTTTCGTGCTTGCTGGCAGTGCGCAAGTAT
CCCCGTCGATTCTGTCATTTTGGGAGTCTAGAAACGCAATGCAACACTCG
CTTCTTTCTCTCACAAGACGCATGTATAGAATCATTTACGGCATGTACAG
GTACAGATAGTAGAGGACGAAAGCAGGCTTGGTTAAAAACGGACAAGAAT
TCACAAAGAGAGTGTTATGTATGTCTCACGCCCTAGCATAGACACGTGTG
TCTCCCTTTCCCACCATTCGATCTTTTTACTCATACTTCACACTATTCTC
CCCCGCCCCACTCCTTGCACATTATTCAGAGGAATAGTACGCCTTTTTAC
GGTGGCCAGAGCAGATCTCCGCATCTTGCCTCATTCCTCCCTCCCTCTCT
CCCTCCCTCCCTTATCACCCCGCAGAAGCTAGCAAGGGCACCCATACACA
AGCTTTCCCCCTTCCTTCTGCCCCAGTTGTCCCTGGTGATGTCTGCGCCC
ATTCTCCCACTGCTTGCTCCTCCTCGTCCTCAACTTCTCATCCCCATGAG
AAGTTTCACGACCTTGTAAGATGGGAGGGCACCCTCGCCCATCTACCACC
ACCCTTCACCTCCTCCTTCTCCTCCTCCTCTTCTCCCTCCTCTCCTCCCG
CTTCACAACAGCAGCAACAGCAGAACTTCACAGCATTAATTGCTTACCAA
ATTACAAGGCGTGTGTGTCTGGCTTTGCAGGTCATTGGGGGTGTAGGGCA
GGAAGGGCGAGTAGCAAGGAGAGGAAGCGAGGGACGCGAAGTAGCAGCAG
CAGCAACAATAAAAGGAGGAAGCATAGCAGATGACGTGATAGCTGATGAA
GTGGCCCTCATCAAGCATACTGTGGGTCTACAGCTGAAAGAGGCGCAGCA
TGACCTCGCCGTGTTTGAAGCCAGTTCTTCGCCCCTCCATGCCTCCCTCC
CTTCCTCGTCCTTGTCCTCGTCCTCCCCCCCCGCCTCGGACGCCACCTCT
GCGGCACTTGCAAAGACATTAGGCCGCCTTGACCTCCTTCTTAGCCAGCT
TGAGAGGCTGGGAAGAGAAGGGGGAGGGAAGGAGGGAGGGACTGATTCAA
CGACCCGCTGCGGCAGCAGCAGCAATAACAACAACGTCGACGGCAGCAGC
AGCAATGGCAACAATGGCAGCAGTAGCATAAGAAGGGAGGCACCGCCAGT
CTCTTCAGGTCGCTCCTTCTCCCCCACGGCCTCCTCGCCGGTTGAAAAAG
GTATGGCGGAAGGGAAGGAGGAAGGGAAGGAGGAGAAAACCCTCGATGAG
GGTTGCGAAACGTCTTCGCCGGCGACGACAACAGACACAACGAGCAGCGC
CGTCTTCAGTAGTGGAAGAAGAGGGCCGAGACAAGGACAGGGAGAAGTGA
TGGATCACGACCCCTACTGTCTCCACCTCCCGTGCGGGGCCGTCTTGCCC
GCTTCCAAAACAGCCACAGCAACAGCAACAGCAGCAGTAGTAACAGCAGC
AGTGGTAACAGCAGCAACAGCAGCAACAGCAGCAGCTGCAGTAGCCTCTA
CTTCTCCGGTCTCCTCTCTCTCCTCTTCCTCTTTTCGCCCGTCGTCTTTT
TCCTCCTCCTCGTCCTCCTCCTCCTCCTCTCGTTCATCCTCTTCCTCTTA
TTCCTCCTCTCGTCCCTCCTCCTCTTCTTCCATTTCCTCCATTTCCTCCT
CCTCTTCCTCCTCTTCCTCCTCCCCCCCCTTCCCCCTTCGCCTCCTCCTT
GTCATCAAGGATGCCAAAAGAGCCCTCCGCCTCTCCCACGCTGCACAAGA
AACGGATGACAAGGATGGGTTTAGGGTTGAGGTGGTGCGGTCCGCCCTTC
AAGCCCTGAGTCGTTTAAGTGTCCAGCATTACGACGTTGTGATCATGGAG
GCGGATTTCCCGATGGTTGATGGCGTGGCCGCCGTACGGAGGCTGAGGAG
GTTTGAAGGGTGGCTGGAAAGCCTAAGGAGATCAGATGCCGCCCTCCCTC
CCGCCCTGGGAGTCAAGCAGGAGGAGGGAGAGGCGTCCGCGAAGCCTCCG
TCGTTCGTGGTGCTGGTTGAGAATGCGGTTGATCGCAGATCTGATGGGAG
CGAAGGAGGGAGGGAAGGGGGGCAGGGTGTGCATAGCTTTGAGAGGAGAG
CGTGGAGGGCAGGGGCTGATCTGGTGGTCAGAAATTTTGAAGACGTGTGC
TTGACAAACATTAGGTCGATCGTTGTGAATGCAGCAGCAGCAGCTGCAGC
AGCAAGAGATAAGAGGGAGGAGAAAAAGGAGAGGGAGGAAGAGAAAGTAC
AGGCAGAGACAGGATTGAGGATGGATAGAAACGGTGCAGTGGTGATTGGG
ATGAGGGTAACAGAGACGATGATAAGGGGGAGGGAAGCAGAGGAGGAGGT
GCAGCAGCAACAGCAGGAGGATCAGAAAACGAAGGAAGAAGAAAGGAGGG
AGAATAAGTCTGAGGGAGACATGAAGGAGGAGGATTTGCTGGAGTGGGAG
GGGAGGAGGTATGGAGGGGAGGGAGGGAGAGAGGGACCTTCAATGGCGCT
GACTGTTACAGCCCTCGGAGATTTAGAAACGCAGGCATCGGAAACGTGTC
GGTTAGAAAATGGCATCAACACCATCATCCCGGGTAGCAGCAGCAGCAAC
TATTGCCAACGGCAGCAGCAAAAACAGCAGGAGCAGCAGGAGCAAGAGCA
AGAGCAGGAGCAGCAGCAGATTAATCTCCCTACTGCTCCTGCTGTTGCTA
CTGCCACAGCCATGGCTGCAGGACCTACTTCCTCCTTTCCCACTGTGCCG
TCCAACTTGCCCATCGCTTCAGGCGCAGCAACATTGACAGGGGGAGTGTA
TGGGGGAGGAGGAGGACCCGCATGGTCCTTAGAAGGTGGTATCGCACGGT
CCGTATCCTCTCTCACTTTCTCCACTGCTAGCGGCATCAACAGCAGCAGC
AGCAGCAGCAGCAGCAGGGGGGGAGGAAAGGACGGCACCTCGCTCTACTC
TTTCATCCCTCCTTCCGTTTTCTCGACTGCGGCCTTGGGAACAGGTGGAG
GGAGAGGAGGAGGTGCGAAGAGAGGGAGGGAGGGAGGGGGGCTTCGGATG
GAGGAGCTCCAGAGCATGGATCTTGACAACACTTTGGGGAACATCAACAA
CGACACCGTCAAACGCCCTTCCGCTCTTCCCCCTTCCTCCTTCCCCACCC
TTCCTTACCTTCCCCCACACTGGCCCACTAAACTGGGCACCCGCACCCTC
CTCCCCTTCTCCCCCTCCTCTCCTCATCCTCCTTCACAAACTCCTCCTCC
ACCTCCTCCATCTCCTCCCGCTCAGCCTTGGCAAGGAAAAGGACATTCAT
CAAAAGAGAGGAAGAGGAGCAGCAGGAGCAACAGGAGCAGCAGCAACATC
CAAAATTCTCTCCCCCTCGTCACTCCTCCTCCTTTTCCACTGTCCCCTCC
TCCGCCTCCTTCTCCTCCTCCTCCCATTCCATCATCCTCAACAAGGCACG
CCGAGCCTGCGCGTACTGTCACAACAAGAAGGTCAGCTGTACTTGCACTC
GACCCTGCCGTCGTTGCGTAGATATGAACATCGAATGCGTCGAATACGAG
CCACGACCGCGGAACGCATCTTGGAACAGACGAAAGCGGGCAGGGAGTAT
GGCCAGCGTCGACTCAGAGGGAGTGAAAAGCATTAAATTTCCAGGATCTC
CGACGGGACGACACCCGCAGAGCAGGCAGAAGCCAGGGGAAAAATCCGCC
AAAACCAACAACGGAGTATCACCGTCGTCACCCACAGCGGCAGCAGCGGC
AGCAGCGACAGCAGCAGCGAGAGCAGTAGAAACCCAACAGTATTCCTCGG
CCCCAGCCTGCTCCTCTTCACCCGATATGAAGGCAGCGATGGACAGGATC
CCTTCCTCCTCCTCCTCCTCCTCCTTGGTTTCCTTTCTGTCCTCCTTCTT
CCCGGCTGATGACTCCTTGCCACCCACCGCCACCGCCCCGTCCTGCTCCT
CCCCCCTACCCCTCCCGGGCTTGTCTCCACCCCAGCCTCTGTGGGCAAGG
GACTGCTAAAAGCAGGAGGGAAGACAGGAAGGAAGAAACGTAGTGTTTTT
GAGGCAGCTGCAACTTGTACAGAGAAAGCCTGGAAGAAGCAACATTTTCA
CCAAAACCCCCAGGAGAATGACGAGGAAAGGCAGCAGCAGCAACAGCACC
ACCACCACCAGCATCGACAACAACAGCCGCAGGAGAAAGTCTCTTCTCCC
TATCATCACGCCACCGCCGCCTCTTCTGCAGTCACAAGACCCCAAGCAGC
AGCAGCAGCAGCTACACCAGGTCTGACTGCCTCTCTACTTTCCTCTCGCA
CCCTCCTCCCCTCCGGAGCAGTCGAAGGACGAGGGGGAGGACTGAGTTTT
GATTGTCCTCCCTCCTACCGTCCCTCCGTCTCAGTCGCCCTTCGCCAGCA
GCAGGAGAAGGTTGTAAGGTTGATGAGGGAGGCGGGAAGGGAGGGAGGGA
GGGAGGGAGGAGTGGGAGGGACCGGGCCGAGGTTTCCCATGCCTGCTCAT
TTGCAGCAGTCTATCACCTCCATGGACCCAGCAGTGCTCAGGATGTGTGA
AGGAGGAAGAGGGGGAGGGAGGGAGGGGGGGAAGGACGGTGGTGGCGAAG
ACGCAGAAGAAAGAGCCGGAGCAGGTGGTTTGGAGGTGGGGGGGGAGGGG
GGCAGGGAAGGGGAGGGGGAAGGGGTTGCTTATCTATTGGGGGAGTATGA
TGTGAATCGGTTCTTTGTGTGA

Coding sequence (CDS) from alignment at chr16:855412..860233-

>NO16G02940.1 ID=NO16G02940.1|Name=NO16G02940.1|organism=Nannochloropsis oceanica|type=CDS|length=3774bp|location=Sequence derived from alignment at chr16:855412..860233- (Nannochloropsis oceanica)
ATGATACAAGCCTCCAACATAGAAGCTAGCAAGGGCACCCATACACAAGC
TTTCCCCCTTCCTTCTGCCCCAGTTGTCCCTGGTGATGTCTGCGCCCATT
CTCCCACTGCTTGCTCCTCCTCGTCCTCAACTTCTCATCCCCATGAGAAG
TTTCACGACCTTCAGCAACAGCAGAACTTCACAGCATTAATTGCTTACCA
AATTACAAGGCGTGTGTGTCTGGCTTTGCAGGTCATTGGGGGTGTAGGGC
AGGAAGGGCGAGTAGCAAGGAGAGGAAGCGAGGGACGCGAAGTAGCAGCA
GCAGCAACAATAAAAGGAGGAAGCATAGCAGATGACGTGATAGCTGATGA
AGTGGCCCTCATCAAGCATACTGTGGGTCTACAGCTGAAAGAGGCGCAGC
ATGACCTCGCCGTGTTTGAAGCCAGTTCTTCGCCCCTCCATGCCTCCCTC
CCTTCCTCGTCCTTGTCCTCGTCCTCCCCCCCCGCCTCGGACGCCACCTC
TGCGGCACTTGCAAAGACATTAGGCCGCCTTGACCTCCTTCTTAGCCAGC
TTGAGAGGCTGGGAAGAGAAGGGGGAGGGAAGGAGGGAGGGACTGATTCA
ACGACCCGCTGCGGCAGCAGCAGCAATAACAACAACGTCGACGGCAGCAG
CAGCAATGGCAACAATGGCAGCAGTAGCATAAGAAGGGAGGCACCGCCAG
TCTCTTCAGGTCGCTCCTTCTCCCCCACGGCCTCCTCGCCGGTTGAAAAA
GGTATGGCGGAAGGGAAGGAGGAAGGGAAGGAGGAGAAAACCCTCGATGA
GGGTTGCGAAACGTCTTCGCCGGCGACGACAACAGACACAACGAGCAGCG
CCGTCTTCAGTAGTGGAAGAAGAGGGCCGAGACAAGGACAGGGAGAAGTG
ATGGATCACGACCCCTACTGTCTCCACCTCCCGTGCGGGGCCGTCTTGCC
CGCTTCCAAAACAGCCACAGCAACAGCAACAGCAGCAGTAGTAACAGCAG
CAGTGGTAACAGCAGCAACAGCAGCAACAGCAGCAGCTGCAGTAGCCTCT
ACTTCTCCGGTCTCCTCTCTCTCCTCTTCCTCTTTTCGCCCGTCGTCTTT
TTCCTCCTCCTCGTCCTCCTCCTCCTCCTCTCGTTCATCCTCTTCCTCTT
ATTCCTCCTCTCGTCCCTCCTCCTCTTCTTCCATTTCCTCCATTTCCTCC
TCCTCTTCCTCCTCTTCCTCCTCCCCCCCCTTCCCCCTTCGCCTCCTCCT
TGTCATCAAGGATGCCAAAAGAGCCCTCCGCCTCTCCCACGCTGCACAAG
AAACGGATGACAAGGATGGGTTTAGGGTTGAGGTGGTGCGGTCCGCCCTT
CAAGCCCTGAGTCGTTTAAGTGTCCAGCATTACGACGTTGTGATCATGGA
GGCGGATTTCCCGATGGTTGATGGCGTGGCCGCCGTACGGAGGCTGAGGA
GGTTTGAAGGGTGGCTGGAAAGCCTAAGGAGATCAGATGCCGCCCTCCCT
CCCGCCCTGGGAGTCAAGCAGGAGGAGGGAGAGGCGTCCGCGAAGCCTCC
GTCGTTCGTGGTGCTGGTTGAGAATGCGGTTGATCGCAGATCTGATGGGA
GCGAAGGAGGGAGGGAAGGGGGGCAGGGTGTGCATAGCTTTGAGAGGAGA
GCGTGGAGGGCAGGGGCTGATCTGGTGGTCAGAAATTTTGAAGACGTGTG
CTTGACAAACATTAGGTCGATCGTTGTGAATGCAGCAGCAGCAGCTGCAG
CAGCAAGAGATAAGAGGGAGGAGAAAAAGGAGAGGGAGGAAGAGAAAGTA
CAGGCAGAGACAGGATTGAGGATGGATAGAAACGGTGCAGTGGTGATTGG
GATGAGGGTAACAGAGACGATGATAAGGGGGAGGGAAGCAGAGGAGGAGG
TGCAGCAGCAACAGCAGGAGGATCAGAAAACGAAGGAAGAAGAAAGGAGG
GAGAATAAGTCTGAGGGAGACATGAAGGAGGAGGATTTGCTGGAGTGGGA
GGGGAGGAGGTATGGAGGGGAGGGAGGGAGAGAGGGACCTTCAATGGCGC
TGACTGTTACAGCCCTCGGAGATTTAGAAACGCAGGCATCGGAAACGTGT
CGGTTAGAAAATGGCATCAACACCATCATCCCGGGTAGCAGCAGCAGCAA
CTATTGCCAACGGCAGCAGCAAAAACAGCAGGAGCAGCAGGAGCAAGAGC
AAGAGCAGGAGCAGCAGCAGATTAATCTCCCTACTGCTCCTGCTGTTGCT
ACTGCCACAGCCATGGCTGCAGGACCTACTTCCTCCTTTCCCACTGTGCC
GTCCAACTTGCCCATCGCTTCAGGCGCAGCAACATTGACAGGGGGAGTGT
ATGGGGGAGGAGGAGGACCCGCATGGTCCTTAGAAGGTGGTATCGCACGG
TCCGTATCCTCTCTCACTTTCTCCACTGCTAGCGGCATCAACAGCAGCAG
CAGCAGCAGCAGCAGCAGGGGGGGAGGAAAGGACGGCACCTCGCTCTACT
CTTTCATCCCTCCTTCCGTTTTCTCGACTGCGGCCTTGGGAACAGGTGGA
GGGAGAGGAGGAGCCTTGGCAAGGAAAAGGACATTCATCAAAAGAGAGGA
AGAGGAGCAGCAGGAGCAACAGGAGCAGCAGCAACATCCAAAATTCTCTC
CCCCTCGTCACTCCTCCTCCTTTTCCACTGTCCCCTCCTCCGCCTCCTTC
TCCTCCTCCTCCCATTCCATCATCCTCAACAAGGCACGCCGAGCCTGCGC
GTACTGTCACAACAAGAAGGTCAGCTGTACTTGCACTCGACCCTGCCGTC
GTTGCGTAGATATGAACATCGAATGCGTCGAATACGAGCCACGACCGCGG
AACGCATCTTGGAACAGACGAAAGCGGGCAGGGAGTATGGCCAGCGTCGA
CTCAGAGGGAGTGAAAAGCATTAAATTTCCAGGATCTCCGACGGGACGAC
ACCCGCAGAGCAGGCAGAAGCCAGGGGAAAAATCCGCCAAAACCAACAAC
GGAGTATCACCGTCGTCACCCACAGCGGCAGCAGCGGCAGCAGCGACAGC
AGCAGCGAGAGCAGTAGAAACCCAACAGTATTCCTCGGCCCCAGCCTGCT
CCTCTTCACCCGATATGAAGGCAGCGATGGACAGGATCCCTTCCTCCTCC
TCCTCCTCCTCCTTGGAGAATGACGAGGAAAGGCAGCAGCAGCAACAGCA
CCACCACCACCAGCATCGACAACAACAGCCGCAGGAGAAAGTCTCTTCTC
CCTATCATCACGCCACCGCCGCCTCTTCTGCAGTCACAAGACCCCAAGCA
GCAGCAGCAGCAGCTACACCAGGTCTGACTGCCTCTCTACTTTCCTCTCG
CACCCTCCTCCCCTCCGGAGCAGTCGAAGGACGAGGGGGAGGACTGAGTT
TTGATTGTCCTCCCTCCTACCGTCCCTCCGTCTCAGTCGCCCTTCGCCAG
CAGCAGGAGAAGGTTGTAAGGTTGATGAGGGAGGCGGGAAGGGAGGGAGG
GAGGGAGGGAGGAGTGGGAGGGACCGGGCCGAGGTTTCCCATGCCTGCTC
ATTTGCAGCAGTCTATCACCTCCATGGACCCAGCAGTGCTCAGGATGTGT
GAAGGAGGAAGAGGGGGAGGGAGGGAGGGGGGGAAGGACGGTGGTGGCGA
AGACGCAGAAGAAAGAGCCGGAGCAGGTGGTTTGGAGGTGGGGGGGGAGG
GGGGCAGGGAAGGGGAGGGGGAAGGGGTTGCTTATCTATTGGGGGAGTAT
GATGTGAATCGGTTCTTTGTGTGA

Synonyms

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