NO16G02850.1, NO16G02850.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G02850.1
Unique Name	NO16G02850.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3420
Alignment location	chr16:820342..828217 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:820342..828217 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G02850.1 vs.
Match: CBN77575.1 (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase [Ectocarpus siliculosus])

HSP 1 Score: 848.2 bits (2190), Expect = 3.000e-242
Identity = 440/763 (57.67%), Postives = 543/763 (71.17%), Query Frame = 0

Query:  320 NRVRWVSWPGTTVDLGSQESVRRRLDSEFACTPVFLSHEVANAYYHKFCHGVLWPLFHCINTNFFNEGLLESFMEQYDAYVHANQCYLEVVADTYEPGDLVLVLDYELMLLPMLLRKRFPDVVCGFFLHCPFPSSEFYRMLPVRQTLLQGILGADLVSFNHFDYVRHFLTSCTRILGLESFPSRVEHNGRLVSLAICPAGIQPEDYELTPEVHRHMETLS--TRYAGMKVIVSVDRLDVSKGLPQKLIAFESLLENYPEWRGQVIMFVILRDRTRGFIEDRSLGRTVDGLVGRVNGRYGHTDYCPVKYVKGDLTNEEVIALNALADVKLVTSIREGINLGAMEFIACQQQTRHGVLIYSEFAGCSTDFKGALIINPYDADKVAESVHVALTMSSTTKQIRNHQLSRYVNTYTSALWARRMISSLQQAGEKAREYNKLQRLDMTYFQAFYERSRKRLLIFDYDGTLVPYHSLPQLAAPPAELIACLEALCDDPLNLVFVISGRRKDDLQEWLGHIPNLGLLAENGYWCRIPSELHHRAHGGLSHMYQHYHPYAHHSHHLSHP-SGASLLSSAYGEGTNS-PLTAGIGGGG----GRGGREGERIELESPAPSKDSLLGVNLDIFSSNASATHLNVFNSVEGVSGG----------NPVLSWDGWISKANHVDLSWKVEVMDIFESFTDRTPGSFLEVKDSCLSWHYRDADADFGIAQAKNLHQHLDQMLKHQPVRVITCPVKKYIVIHPSRLNKGRALVHLLQD 1065
            +RVRWVSW G  VD   Q +VR++L+++  CTPVFL+ EV + YYHKF  GVLWPLFHCI TNF NE LLE+F  QY+AY HAN+ +LE VA  YE GD+VLV DY+LMLLP LLRKRFPD+ CGFFLHCPFPS+EFYRMLPVRQ LL+GILGADLVSFNHFDYVRHFL SCTRILGLES+PSR+E+NGRL+S++ICP GI PE +E+TPE+   ME L         KV+VS+DRLD+ KG+P KL+A +SLLENYPE RG+VIMFV++RD  R    DR L + VDGLVGRVNG+YG TDY P+ Y+K  L++ E++AL ALADV LVTS+REG+NLGAMEF+ACQQ + HGVL+YSEFAGC+  FKGA+++NPYD DKVAES+H AL M   TK+IR+HQL RYVN YTS LWARR+I SL  AG+KAREYN+LQ+LD  Y Q+FY RSR+RLL+FDYDGTLV +H+L QL+APP  L+  LEALC+D  N+V++ISGRRK +L++WLG +P LGL+AE+GYW +                     P A  +H    P   AS      G G+ S    A +G  G    GR GR GER E  S  P               + S  H      V  VSGG          N       WI ++++ DLSW+ EV+ I E+FT RTPGSFLE+KDS L+WH++D D DFG  QAKNL  H +QML ++ VRV+  P+KKYIVI PSR+NKG+AL+ +L +
Sbjct:   36 HRVRWVSWLGGVVDPAIQPAVRKKLEADHNCTPVFLTQEVEDLYYHKFTQGVLWPLFHCIPTNF-NEALLENFQSQYEAYAHANKLFLEAVAGIYEEGDIVLVHDYDLMLLPALLRKRFPDITCGFFLHCPFPSTEFYRMLPVRQVLLEGILGADLVSFNHFDYVRHFLNSCTRILGLESYPSRIEYNGRLISVSICPMGIHPEAFEMTPEIGAVMERLRHVCHTEDRKVLVSIDRLDLCKGIPLKLLAVDSLLENYPELRGKVIMFVVVRDDGRR--GDRDLRKAVDGLVGRVNGKYGKTDYTPIHYMKKKLSHSEMVALWALADVALVTSLREGVNLGAMEFVACQQTSMHGVLVYSEFAGCALSFKGAVLVNPYDPDKVAESIHTALAMPVMTKKIRHHQLLRYVNHYTSHLWARRIIPSLLMAGQKAREYNRLQKLDAGYLQSFYGRSRRRLLVFDYDGTLVAHHALAQLSAPPPVLLQVLEALCEDTANVVYIISGRRKSELEDWLGGVPRLGLIAEHGYWVK---------------------PAA--AHRTQQPRDRASTGWDETGSGSRSRDQLADMGEWGSERSGREGRFGERRESGSSTPMGHQ---------QPSMSYKHRG-HRRVRTVSGGGLFSPDSASNNQPTDGAEWIMRSHNADLSWRSEVLAILENFTGRTPGSFLELKDSGLTWHFQDTDPDFGQTQAKNLQLHFEQMLANEQVRVVMAPLKKYIVIQPSRINKGKALLTVLHE 762

The following BLAST results are available for this feature:

BLAST of NO16G02850.1 vs.

BLAST of NO16G02850.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBN77575.1	3.000e-242	57.67	Trehalose 6-phosphate synthase, family GT20 / Treh...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G02850	NO16G02850	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G02850.1	NO16G02850.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G02850.1.cds1	NO16G02850.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds2	NO16G02850.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds3	NO16G02850.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds4	NO16G02850.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds5	NO16G02850.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds6	NO16G02850.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds7	NO16G02850.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds8	NO16G02850.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds9	NO16G02850.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds10	NO16G02850.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds11	NO16G02850.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds12	NO16G02850.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds13	NO16G02850.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds14	NO16G02850.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds15	NO16G02850.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds16	NO16G02850.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds17	NO16G02850.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds18	NO16G02850.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds19	NO16G02850.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds20	NO16G02850.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds21	NO16G02850.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds22	NO16G02850.1.cds22	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds23	NO16G02850.1.cds23	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds24	NO16G02850.1.cds24	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G02850.1.cds25	NO16G02850.1.cds25	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:820342..828217+
coding sequence from alignment at chr16:820342..828217+

mRNA sequence

>NO16G02850.1 ID=NO16G02850.1|Name=NO16G02850.1|organism=Nannochloropsis oceanica|type=mRNA|length=3420bp
ATGTGTGGACACCGCCACCACGGCGATAAGGCGTTCGTTACCTTCTGGCC
TTTTGTGGCATTTATGGGTCCAATACCTCTGGCGTACTCCAAGACCCTCT
CCCAACCAGGCGACCGCTGGCAATCACACCAGGCCGCAACCATATTCTCC
CTCTCCTCCTCCGTCGCCGTGCCAGAAAAGGAGGAAGCAGCACAGGAGCG
GCACCAGCAACATCGGCAATTGCACCACGATCAGCAGCTCCAACAGCAGC
AGCTCCAGCAGCAGCGGCAGCACGAGTTACGGCGAGAGATAGGTAGGCCT
CCCGCTGCTGACATCACGCCCTCTGTACCTTCTACAATAACTGCAAGTAC
GGCCATAAACGGCGACAAGAGCAGCAGCAGCACCACCACCACCCTCATGA
GTAGCGCGAGCCCAGGTCGAGGAGGGGCACCTCGTCCTCTTCCTACCCCT
CAAGATATAAGCATCCCTCCCATCTCTGCCCCATTTTCCCGCCTTTCCAC
CACCCGGCCTTCTCCCTCGCCAACTGGTCGTAGGGTGATGCACGCGGACG
GAACCATGAGTGGTGGAGGAGGAGGGGGAGGGGCTGGAGGGGGAGGGGTG
GGGTCAGGCGGAGGGCAACGGCGCAATGTCACCCCTCCCCGGAACCATCT
CTCGATGAATTTAGCACCGGAGGATGACTCGGAAGCCGCAGAGCGTGACA
TGCTCCATTCGGAAACGGACATGGAAGGCGAGCTCCTGGGACAACTGCAG
GAACTACACCGACAGCTGGCGGAGCTCCGGCAGCAGTCTAACCGGGAGGA
ACGGGAACGTCAGCTGTTCGATACCTCGAGCAAGCTGATTGTTTGTGCCA
CAACCAAGCCTGTGCGTCTTGTCAAAGCCAAGGAAGGAGACGCACAGTGG
ATCTACGAGGAGTACAAGGGCCGCTTCCGCTCCGCCATCGACTCACTCGC
TGGCACTAACCGTGTCCGCTGGGTCTCGTGGCCAGGGACGACCGTGGATC
TGGGGAGTCAGGAATCCGTTAGGCGTCGGTTGGACTCCGAGTTCGCCTGC
ACGCCCGTCTTCCTCAGCCACGAGGTCGCCAATGCCTACTACCACAAGTT
CTGCCATGGGGTCCTGTGGCCCCTCTTCCATTGCATTAATACCAACTTCT
TCAACGAGGGCCTCCTGGAGTCATTCATGGAACAATACGATGCCTACGTG
CACGCCAACCAGTGCTACCTCGAGGTGGTGGCCGACACGTACGAACCGGG
AGACCTCGTCCTCGTCCTCGACTACGAGCTCATGCTCCTGCCCATGCTCC
TTCGAAAACGGTTTCCAGACGTTGTGTGCGGCTTCTTCCTCCATTGTCCG
TTTCCCTCTTCGGAGTTTTATCGGATGTTGCCCGTCCGTCAGACCCTGCT
GCAGGGCATCCTGGGCGCGGACTTGGTCTCCTTCAATCACTTCGACTACG
TCCGTCATTTCCTCACTTCCTGCACTCGCATCCTGGGCCTGGAGTCCTTC
CCCTCCCGCGTCGAGCATAATGGACGCCTTGTCTCCCTCGCCATCTGCCC
TGCTGGGATTCAACCGGAGGACTACGAGCTCACGCCGGAGGTGCATCGGC
ACATGGAGACGCTGTCGACGCGCTATGCCGGCATGAAGGTGATCGTCTCT
GTGGACCGTCTGGACGTCTCTAAAGGCCTCCCCCAGAAGCTGATTGCCTT
CGAGTCTCTCCTGGAAAACTACCCGGAGTGGAGGGGGCAAGTTATAATGT
TCGTCATCCTTCGCGATCGCACACGTGGCTTCATCGAGGACCGCTCCCTC
GGCCGTACTGTGGATGGGCTGGTGGGTCGTGTGAACGGTCGGTACGGCCA
TACAGATTATTGTCCTGTGAAGTACGTCAAGGGCGACTTGACGAACGAGG
AAGTTATTGCCTTGAACGCGCTGGCGGATGTGAAGCTCGTCACCTCCATT
CGCGAAGGTATCAATCTGGGAGCCATGGAATTCATTGCCTGCCAGCAACA
GACCCGCCACGGTGTTCTCATCTACTCCGAATTCGCCGGCTGTTCCACGG
ACTTCAAGGGGGCTTTAATCATCAATCCATATGACGCGGATAAGGTCGCG
GAAAGCGTCCACGTTGCACTCACCATGAGCAGCACCACCAAACAGATCCG
AAACCACCAGCTGTCTCGCTACGTTAACACCTACACGAGCGCCTTGTGGG
CTCGACGGATGATCTCCTCCTTGCAGCAAGCCGGGGAGAAGGCCCGTGAG
TACAACAAACTCCAGCGCCTGGACATGACCTACTTCCAGGCATTTTACGA
GCGCTCTCGGAAGCGACTCCTCATCTTCGATTATGACGGGACTCTCGTCC
CTTACCACAGCTTGCCTCAGCTCGCTGCTCCTCCCGCGGAGCTGATTGCC
TGCTTAGAAGCCTTGTGTGACGATCCTCTTAATTTGGTCTTTGTCATCAG
TGGCCGACGCAAGGACGATTTGCAGGAATGGCTCGGGCATATACCTAATC
TAGGTCTGCTTGCCGAGAATGGCTACTGGTGCCGCATTCCCTCGGAGCTG
CACCACCGAGCGCATGGCGGCCTGTCGCACATGTACCAGCACTATCACCC
ATACGCACATCATTCGCACCACCTCTCTCACCCCTCGGGCGCCTCTTTAT
TGTCTTCCGCGTACGGGGAAGGGACGAACTCGCCTTTGACAGCGGGGATA
GGAGGGGGAGGGGGAAGAGGAGGGAGGGAAGGAGAGCGGATAGAGCTTGA
GAGTCCTGCCCCCAGCAAAGACAGCCTGCTAGGCGTCAATCTCGACATTT
TTTCCTCCAATGCCTCAGCCACCCATCTCAACGTCTTTAACTCGGTGGAG
GGCGTGTCTGGTGGCAATCCGGTTCTGTCTTGGGACGGCTGGATATCCAA
GGCCAATCACGTCGACCTCTCCTGGAAAGTGGAGGTCATGGACATATTCG
AATCCTTCACAGACCGCACGCCGGGCTCTTTCCTGGAAGTGAAGGATTCC
TGCCTCTCGTGGCACTACCGCGATGCCGACGCTGATTTTGGGATTGCCCA
GGCCAAGAACCTGCACCAGCACCTGGATCAGATGCTCAAGCATCAGCCCG
TGCGTGTCATCACCTGCCCTGTCAAGAAGTACATCGTCATTCACCCGTCG
CGCCTCAACAAGGGAAGAGCCCTCGTTCATCTCCTGCAGGACTTCGGCGC
TGCCGCCTCCTCCTCCTCCACCGCATTCAACAGCAACAGCACCACCGCCA
TCCCCCTCTCCGCCAGCGCCCCGAGCCTGATCTCCCTCCCTGCAACCCTC
CTCTCCAACTCCAACCTCTCGGCGGCGTCGGACACACCCGGCGCTACTCC
CGTGGAGGGAGGGAGGGAGGGGGGAGGGGTGGCGGGAGGAGGGGGGCTGG
GGGGGGCGGGGAGGGTCTAG

protein sequence of NO16G02850.1

>NO16G02850.1-protein ID=NO16G02850.1-protein|Name=NO16G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1140bp
MCGHRHHGDKAFVTFWPFVAFMGPIPLAYSKTLSQPGDRWQSHQAATIFS
LSSSVAVPEKEEAAQERHQQHRQLHHDQQLQQQQLQQQRQHELRREIGRP
PAADITPSVPSTITASTAINGDKSSSSTTTTLMSSASPGRGGAPRPLPTP
QDISIPPISAPFSRLSTTRPSPSPTGRRVMHADGTMSGGGGGGGAGGGGV
GSGGGQRRNVTPPRNHLSMNLAPEDDSEAAERDMLHSETDMEGELLGQLQ
ELHRQLAELRQQSNREERERQLFDTSSKLIVCATTKPVRLVKAKEGDAQW
IYEEYKGRFRSAIDSLAGTNRVRWVSWPGTTVDLGSQESVRRRLDSEFAC
TPVFLSHEVANAYYHKFCHGVLWPLFHCINTNFFNEGLLESFMEQYDAYV
HANQCYLEVVADTYEPGDLVLVLDYELMLLPMLLRKRFPDVVCGFFLHCP
FPSSEFYRMLPVRQTLLQGILGADLVSFNHFDYVRHFLTSCTRILGLESF
PSRVEHNGRLVSLAICPAGIQPEDYELTPEVHRHMETLSTRYAGMKVIVS
VDRLDVSKGLPQKLIAFESLLENYPEWRGQVIMFVILRDRTRGFIEDRSL
GRTVDGLVGRVNGRYGHTDYCPVKYVKGDLTNEEVIALNALADVKLVTSI
REGINLGAMEFIACQQQTRHGVLIYSEFAGCSTDFKGALIINPYDADKVA
ESVHVALTMSSTTKQIRNHQLSRYVNTYTSALWARRMISSLQQAGEKARE
YNKLQRLDMTYFQAFYERSRKRLLIFDYDGTLVPYHSLPQLAAPPAELIA
CLEALCDDPLNLVFVISGRRKDDLQEWLGHIPNLGLLAENGYWCRIPSEL
HHRAHGGLSHMYQHYHPYAHHSHHLSHPSGASLLSSAYGEGTNSPLTAGI
GGGGGRGGREGERIELESPAPSKDSLLGVNLDIFSSNASATHLNVFNSVE
GVSGGNPVLSWDGWISKANHVDLSWKVEVMDIFESFTDRTPGSFLEVKDS
CLSWHYRDADADFGIAQAKNLHQHLDQMLKHQPVRVITCPVKKYIVIHPS
RLNKGRALVHLLQDFGAAASSSSTAFNSNSTTAIPLSASAPSLISLPATL
LSNSNLSAASDTPGATPVEGGREGGGVAGGGGLGGAGRV*

mRNA from alignment at chr16:820342..828217+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G02850.1 ID=NO16G02850.1|Name=NO16G02850.1|organism=Nannochloropsis oceanica|type=mRNA|length=7876bp|location=Sequence derived from alignment at chr16:820342..828217+ (Nannochloropsis oceanica)
ATGTGTGGACACCGCCACCACGGCGATAAGGCGTTCGTTACCTTCTGGCC
TTTTGTGGCATTTATGGGTCCAATACCTCTGGCGTACTCCAAGACCCTCT
GTTGACCCTCCCGGTAGAAAAGCTCCCTCCTATCCCCCGTAGTGAGGGCA
AATCGCCCTCGAGCTAGCACACCCTAACACGACGACCGTGCGGTGCGGTA
TACATCTCAACGATAACGTCGAGCACATTCCCCTTACCCTTGTCTTCCCA
CCACGCTTATTCCCCTCTCCCCCTCCCTGTCCACAAAGCCCGATAAACAG
AGAGACCAGCAGTGCAACAGCACTTGTTCCGTCTAAATCAAGCCCAACCA
GGCGACCGCTGGCAATCACACCAGGCCGCAACCATATTCTCCCTCTCCTC
CTCCGTCGCCGTGCCAGAAAAGGAGGAAGCAGCACAGGAGCGGCACCAGC
AACATCGGCAATTGCACCACGATCAGCAGCTCCAACAGCAGCAGCTCCAG
CAGCAGCGGCAGCACGAGTTACGGCGAGAGATAGGTAGGCCTCCCGCTGC
TGACATCACGCCCTCTGTACCTTCTACAATAACTGCAAGTACGGCCATAA
ACGGCGACAAGAGCAGCAGCAGCACCACCACCACCCTCATGAGTAGCGCG
AGCCCAGGTCGAGGAGGGGCACCTCGTCCTCTTCCTACCCCTCAAGATAT
AAGCATCCCTCCCATCTCTGCCCCATTTTCCCGCCTTTCCACCACCCGGC
CTTCTCCCTCGCCAACTGGTCGTAGGGTGATGCACGCGGACGGAACCATG
AGTGGTGGAGGAGGAGGGGGAGGGGCTGGAGGGGGAGGGGTGGGGTCAGG
CGGAGGGCAACGGCGCAATGTCACCCCTCCCCGGAACCATCTCTCGATGA
ATTTAGCACCGGAGGATGACTCGGAAGGTAAAATGGGAGGGAGGGCGGGA
GGGAGGGAGGGAGTGGCTTTGTAAGTGTCCTTCACCCGTTCTCACATGGA
ACGTATTGTACATTGCCTTGACTCGTCATCCGCCTTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGACAGCCGCAGAGCGTGAC
ATGCTCCATTCGGAAACGGACATGGAAGGCGAGCTCCTGGGACAACTGCA
GGAACTACACCGACAGCTGGCGGAGGTGAGGGCGGGAGGAAGGGAGGGGG
GAGGGGAGGAGGGCATAGCACTCTCTCGTGAGGCTCCTCGAGACCAAACT
AAAATGGGAAAAGAGGAGCAGAAGTGGGATTGCCGATAATCGCCTCTATT
CATCCCTCCCTCACTCCCTCCCTTCCTCCAGCTCCGGCAGCAGTCTAACC
GGGAGGAACGGGAACGTCAGCTGTTCGATACCTCGAGCAAGCTGATTGTT
TGTGCCACAACCAAGCCTGTGCGTCTTGTCAAAGCCAAGGAAGGAGACGC
ACAGTGGATCTACGAGGAGGTGAGGGAGAGAAGGAGGGAGGGAAGGAGGG
AGGGAAGGAGGGAGGGAGGGAGACAGAGGTTGTTTATGGCTCACTCTTTC
CCTCCCTGACTTGCCCCCCCCCCCCCTCACACACTCTCACACACACAAGT
ACGACAAACACCCACTCACTCACTAACCAACCTCACCCAATAACAGTACA
AGGGCCGCTTCCGCTCCGCCATCGACTCACTCGCTGGCACTAACCGGCAA
GTCGCCTTCCCTCCTTCTCTTCCTCCCTCCCTCCCTCCCGTCCTCCTCTC
AACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTCCCGCAGTGTCCGCT
GGGTCTCGTGGCCAGGGACGACCGTGGATCTGGGGAGTCAGGAATCCGTT
AGGCGTCGGTTGGACTCCGAGTTCGCCTGCACGCCCGTCTTCCTCAGCCA
CGAGGTCGCCAATGCCTACTACCACAAGGTACGCCTTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCCCCTCCTTTTCTTCACGCACTGTTTTGC
CTCTGAAGCAGGCCATTTTCCCCCTCTCTCCTTCCCTTCATCCCTTCCTC
CAGCATTCCACTTCCCCCCGCCCCCCTGGGCTGCTCTTGTGCAGTTGCTT
CTACTTACACGTCTCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CATCCAGTTCTGCCATGGGGTCCTGTGGCCCCTCTTCCATTGCATTAATA
CCAACTTCTTCAACGAGGGCCTCCTGGAGTCATTCATGGAACAATACGAT
GCCTACGTGCACGCCAACCAGTGCTACCTCGAGGTACCTCCCTTCCCATC
ACTACCTCCCTCCCTGTTCAACGCGCCGCGCGAATGTCATCATGTCATCA
TTAGCTTCTCCCTCCCTCCATATCGTCACCCTACCTCCCTCCTTCCCTCC
CTCCCTCCCTCTCCAGGTGGTGGCCGACACGTACGAACCGGTACACCTCG
TCCTCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTGC
AGGTGGTGGCCGACACGTACGAACCGGGAGACCTCGTCCTCGTCCTCGAC
TACGAGCTCATGCTCCTGCCCATGCTCCTTCGAAAACGGTTTCCAGACGT
TGTGTGCGGCTTCTTCCTCCATTGTCCGTTTCCCTCTTCGGAGTTTTATC
GGATGTTGCCCGTCCGTCAGACCCTGCTGCAGGTACGTGTGTTGGCACGT
AAACATAGGTGTGTACACCAACCAGCCTCCTCGCGCGCATGCCTTCATCA
ATTCACGCACACACTGGAAGGGGAGGATGAAATTGGAGGGAGGGAGGGAG
AGAGGGAGGGAAGGAGGGATGCGGGGCAAGCTAGTGTGCTGCCGTGTGGA
TGCATGCCACCTTTACCCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTTT
TTTTGGGGAAGGCTTTCTGGGCGCGGACTAAAACTAACACTTCGACTAAG
TCCGTCATTTCCTCGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTTAGGGCATCCTGGGCGCGGACTTGGTCTCC
TTCAATCACTTCGACTACGTCCGTCATTTCCTCACTTCCTGCACTCGCAT
CCTGGGCCTGGAGTCCTTCCCCTCCCGCGTCGAGCATAATGGACGGTACG
CCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTCAGTCGCCCTCTTTCTC
CCCTGTCCTCTTGTGTTTGCCTCATCGAGCTCGTCCGACTTGCGCACTGG
CAAACCCCCCCTCCCTCCTTCCCTCCCCCCTCCCTCCCTCCTTCCCTCCC
CCCCTCCCTCCCTCCCTCCCTAGCCTTGTCTCCCTCGCCATCTGCCCTGC
TGGGATTCAACCGGAGGACTACGAGCTCACGCCGGAGGTGCATCGGCACA
TGGAGACGCTGTCGACGCGCTATGCCGGCATGAAGGTGGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCAAGCAC
CGATACCCTTTCAACGCTCATCCCCCTCCCCTCCCCTCCCCTTCCCTTCC
CTTCCCTCCTCCTCAACTCTATCCATGGCCATGCCCAGGTGATCGTCTCT
GTGGACCGTCTGGACGTCTCTAAAGGTAAGGAAGGGAAGATTACATCCTG
AAAGGGAGAAGGAAGAGAATCAGTCCCTTCCCCTCCCTCCCTCCTTTCAG
GCCTCCCCTCGAAGCAGATTGCTTTCGAGTCCTCACCAACCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
AGGCCTCCCCCAGAAGCTGATTGCCTTCGAGTCTCTCCTGGAAAACTACC
CGGAGTGGAGGGGGCAAGTTATAATGTTCGTCATCCTTCGCGATCGCACA
CGTGGCTTCATCGGTACGCCCCTCTCTCCCTCCCTCGTGGTGTTGCCATC
GACATTTGCACGGGCTTGCTCTGACACCCATCCCCCTTTCCTCCCTCCCT
CCCTCCCTTAGAGGACCGCTCCCTCGGCCGTACTGTGGATGGGCTGGTGG
GTCGTGTGAACGGTCGGTACGGCCATACAGATTATTGTCCTGTGAAGTAC
GTCAAGGGCGACTTGACGGTGAGGAAGGGAGGGAAGGAGGGAGGGAGGGA
GGGAGCGGTTTCATATCATCAGACTCGGTGAACTTGACAAAAACAGCGAG
ATCTCACCACTCCCATCCACCCTCCCTCCCGCCCGCCCACCCTCCCTCCC
TTCCTCCATCCTTGCCCCCAGAACGAGGAAGTTATTGCCTTGAACGCGCT
GGCGGATGTGAAGCTCGTCACCTCCATTCGCGAAGGTATCAATCTGGGAG
CCATGGAATTCATTGCCTGCCAGCAACAGACCCGCCACGGGTAAGCCTCC
TCCCTTCCCCCCTTCCTCCCTCCCTCCCTCCCTCCATTCCTTCCTTCCTC
CCTCCTCAAGACCTCCCTTCGGAAAGGCGTTTATCTGAGTGCCATGCTGC
CGGTGCACTTCCTCCCTCCTTCCCTTCTTCCCACCCTCCAGTCCTCCCTC
CCTCCCTCGATTGTGTCCCTCTATGCGTCCTTTCACTCAATCCCCTCCCT
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCGCCCTCCCTCAGTGTTCT
CATCTACTCCGAATTCGCCGGCTGTTCCACGGACTTCAAGGGGGCTTTAA
TCATCAATCCATATGACGCGGATAAGGTCGCGGAAAGCGTCCACGTTGCA
CTCACCATGAGCAGCACCACCAAACAGGTGAGTGCCTTCCCGCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCCTCTCTCTTCAGATCC
GACACCAACGGCTGTCTCGCTACGTTGACACCTACACGAGCGCTTCACAT
CATCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCC
CTCTCTCTTCAGATCCGAAACCATCAGCTGTCTCGCTACGTCAACACCTA
CACGAGCGCTTCACATCATCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTTCCCTCCCCAGATCCGAAACCACCAGCTGTCTCGCTACGTTAACA
CCTACACGAGCGCCTTGTGGGCTCGACGGATGATCTCCTCCTTGCAGCAA
GTAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGAATAGATTGATCAGCAGCATCCCTTTCCTTCCGTCCTCAC
CCTCCCTCCTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCTCCCTCC
CTCCCCCCTCCCTCCCTCCAGGCCGGGGAGAAGGCCCGTGAGTACAACAA
ACTCCAGCGCCTGGACATGACCTACTTCCAGGCATTTTACGAGCGCTCTC
GGAAGCGACTCCTCATCTTCGATTATGACGGGACTCTCGTCCCTTACCAC
AGCTTGCCTCAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTTCAGAACGAACGAAAGAGCTTGACAGGAAGAAAGGTCCAA
CCCCAATCCTCCCTCCCTCCCTCCTTCCCTTCCTCCCTCCCTCCCTCCCT
CCCTCCATTCTTTTAACTAGACTGACGTTACACCATAATCAAAATCTCAC
CCTCTCTTCCTCCCTCCCTTCCTCCCTCCCTCCCAGCTCGCTGCTCCTCC
CGCGGAGCTGATTGCCTGCTTAGAAGCCTTGTGTGACGATCCTCTTAATT
TGGTCTTTGTCATCAGTGGCCGACGCAAGGACGATTTGCAGGTAGGCAGG
GAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGAA
AGCAAGGAGGGGGGTTCTTCAAAGCAACAACCAGTCGTACACACATTCTA
ACCCCCGCCCTCCCTCCCTCCCTCCCTCCCTTAGGAATGGCTCGGGCATA
TACCTAATCTAGGTCTGCTTGCCGAGAATGGCTACTGGTGCCGCATTCCC
TCGGAGCTGCACCACCGAGCGCATGGCGGCCTGTCGCACATGTAGGGAGG
GAGGGGGGGAGGGAGGGAAAATCGACCGAATGAGGGATGTGATGGGTATG
CTTTCCTGACTCCTTCATGCCGGTGACATCACCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTCCC
AGGTACCAGCACTATCACCCATACGCACATCATTCGCACCACCTCTCTCA
CCCCTCGGGCGCCTCTTTATTGTCTTCCGCGTACGGGGAAGGGACGAACT
CGCCTTTGACAGCGGGGATAGGAGGGGGAGGGGGAAGAGGAGGGAGGGAA
GGAGAGCGGATAGAGCTTGAGAGTCCTGGTGAGTGGGCTAGAGGGGAGGA
AGGGAGGGAGGGGGGGAGGGAAAAATGGAGGGAGACAGAGAGGGAGGGAG
GGATGTAGGAAAGGAGGGAACGTCAACCGATAGATTCTTAGATATGTATA
TATGTATGTATACATATGTACACACATATCTATCTTCTTTGCCATGATCT
CACCTATCGACCTCCCCCTCCCTTCCTCCCTCCCTCCCTCCAGCCCCCAG
CAAAGACAGCCTGCTAGGCGTCAATCTCGACATTTTTTCCTCCAATGCCT
CAGCCACCCATCTCAACGTCTTTAACTCGGTGGAGGTACGCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCTCCCTGTCTTTGCCGTTGGCTCCCAA
CCCCAACCACCGCATCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCAGGGCGTGTCTGGTGGCAATCCGGTTCT
GTCTTGGGACGGCTGGATATCCAAGGCCAATCACGTCGACCTCTCCTGGA
AAGTGGAGGTAGGTAACCCCCCCCCTCCCTCTTTCCCCGCCTCCCTTACG
TATACTATTGTCCTCCTTCCCTTCCTCCCCTTCCTCCCCCCCTCCTTCCC
CCCCACCCATTCCCTAGCGTCCTTTTCCCTCTCGGTACATTCCTTCCACT
CCCCTCCCTCCCTCCCTCCCTCCCGCCCTCCAGGTCATGGACATATTCGA
ATCCTTCACAGACCGCACGCCGGGCTCTTTCCTGGAAGTGAAGGATTCCT
GCCTCTCGTGGCACTACCGCGATGCCGACGCTGATTTTGGGATTGCCCAG
GTGGGTAGCTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGAGAA
AGCATCCTCCGTTTCGTCTTGTCCACCTCTCCCTTCCTCACTCCCTCCTT
TTCTCCCTTCTACCCCCCCTCCCACCCGGATGATTTACCGCTCCCTCTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGCCAAGAACCTGCA
CCAGCACCTGGATCAGATGCTCAAGCATCAGCCCGTGCGTGTCATCACCT
GCCCTGTCAAGAAGTACATCGTCATTCACCCGTCGCGCCTCAACAAGGGA
AGAGCCCTCGTTCATCTCCTGCAGGTAGGTCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCGCTCTTCTTCTTTATCTTTCCACAACTCATCCTCCCC
TTCTTGTCCCCCTCCCTCCCTCCCTTCCTCCCCCTCTCCCTGCAGGACTT
CGGCGCTGCCGCCTCCTCCTCCTCCACCGCATTCAACAGCAACAGCACCA
CCGCCATCCCCCTCTCCGCCAGCGCCCCGAGCCTGATCTCCCTCCCTGCA
ACCCTCCTCTCCAACTCCAACCTCTCGGCGGCGTCGGACACACCCGGCGC
TACTCCCGTGGAGGGAGGGAGGGAGGGGGGAGGGGTGGCGGGAGGAGGGG
GGCTGGGGGGGGCGGGGAGGGTCTAG

Coding sequence (CDS) from alignment at chr16:820342..828217+

>NO16G02850.1 ID=NO16G02850.1|Name=NO16G02850.1|organism=Nannochloropsis oceanica|type=CDS|length=3420bp|location=Sequence derived from alignment at chr16:820342..828217+ (Nannochloropsis oceanica)
ATGTGTGGACACCGCCACCACGGCGATAAGGCGTTCGTTACCTTCTGGCC
TTTTGTGGCATTTATGGGTCCAATACCTCTGGCGTACTCCAAGACCCTCT
CCCAACCAGGCGACCGCTGGCAATCACACCAGGCCGCAACCATATTCTCC
CTCTCCTCCTCCGTCGCCGTGCCAGAAAAGGAGGAAGCAGCACAGGAGCG
GCACCAGCAACATCGGCAATTGCACCACGATCAGCAGCTCCAACAGCAGC
AGCTCCAGCAGCAGCGGCAGCACGAGTTACGGCGAGAGATAGGTAGGCCT
CCCGCTGCTGACATCACGCCCTCTGTACCTTCTACAATAACTGCAAGTAC
GGCCATAAACGGCGACAAGAGCAGCAGCAGCACCACCACCACCCTCATGA
GTAGCGCGAGCCCAGGTCGAGGAGGGGCACCTCGTCCTCTTCCTACCCCT
CAAGATATAAGCATCCCTCCCATCTCTGCCCCATTTTCCCGCCTTTCCAC
CACCCGGCCTTCTCCCTCGCCAACTGGTCGTAGGGTGATGCACGCGGACG
GAACCATGAGTGGTGGAGGAGGAGGGGGAGGGGCTGGAGGGGGAGGGGTG
GGGTCAGGCGGAGGGCAACGGCGCAATGTCACCCCTCCCCGGAACCATCT
CTCGATGAATTTAGCACCGGAGGATGACTCGGAAGCCGCAGAGCGTGACA
TGCTCCATTCGGAAACGGACATGGAAGGCGAGCTCCTGGGACAACTGCAG
GAACTACACCGACAGCTGGCGGAGCTCCGGCAGCAGTCTAACCGGGAGGA
ACGGGAACGTCAGCTGTTCGATACCTCGAGCAAGCTGATTGTTTGTGCCA
CAACCAAGCCTGTGCGTCTTGTCAAAGCCAAGGAAGGAGACGCACAGTGG
ATCTACGAGGAGTACAAGGGCCGCTTCCGCTCCGCCATCGACTCACTCGC
TGGCACTAACCGTGTCCGCTGGGTCTCGTGGCCAGGGACGACCGTGGATC
TGGGGAGTCAGGAATCCGTTAGGCGTCGGTTGGACTCCGAGTTCGCCTGC
ACGCCCGTCTTCCTCAGCCACGAGGTCGCCAATGCCTACTACCACAAGTT
CTGCCATGGGGTCCTGTGGCCCCTCTTCCATTGCATTAATACCAACTTCT
TCAACGAGGGCCTCCTGGAGTCATTCATGGAACAATACGATGCCTACGTG
CACGCCAACCAGTGCTACCTCGAGGTGGTGGCCGACACGTACGAACCGGG
AGACCTCGTCCTCGTCCTCGACTACGAGCTCATGCTCCTGCCCATGCTCC
TTCGAAAACGGTTTCCAGACGTTGTGTGCGGCTTCTTCCTCCATTGTCCG
TTTCCCTCTTCGGAGTTTTATCGGATGTTGCCCGTCCGTCAGACCCTGCT
GCAGGGCATCCTGGGCGCGGACTTGGTCTCCTTCAATCACTTCGACTACG
TCCGTCATTTCCTCACTTCCTGCACTCGCATCCTGGGCCTGGAGTCCTTC
CCCTCCCGCGTCGAGCATAATGGACGCCTTGTCTCCCTCGCCATCTGCCC
TGCTGGGATTCAACCGGAGGACTACGAGCTCACGCCGGAGGTGCATCGGC
ACATGGAGACGCTGTCGACGCGCTATGCCGGCATGAAGGTGATCGTCTCT
GTGGACCGTCTGGACGTCTCTAAAGGCCTCCCCCAGAAGCTGATTGCCTT
CGAGTCTCTCCTGGAAAACTACCCGGAGTGGAGGGGGCAAGTTATAATGT
TCGTCATCCTTCGCGATCGCACACGTGGCTTCATCGAGGACCGCTCCCTC
GGCCGTACTGTGGATGGGCTGGTGGGTCGTGTGAACGGTCGGTACGGCCA
TACAGATTATTGTCCTGTGAAGTACGTCAAGGGCGACTTGACGAACGAGG
AAGTTATTGCCTTGAACGCGCTGGCGGATGTGAAGCTCGTCACCTCCATT
CGCGAAGGTATCAATCTGGGAGCCATGGAATTCATTGCCTGCCAGCAACA
GACCCGCCACGGTGTTCTCATCTACTCCGAATTCGCCGGCTGTTCCACGG
ACTTCAAGGGGGCTTTAATCATCAATCCATATGACGCGGATAAGGTCGCG
GAAAGCGTCCACGTTGCACTCACCATGAGCAGCACCACCAAACAGATCCG
AAACCACCAGCTGTCTCGCTACGTTAACACCTACACGAGCGCCTTGTGGG
CTCGACGGATGATCTCCTCCTTGCAGCAAGCCGGGGAGAAGGCCCGTGAG
TACAACAAACTCCAGCGCCTGGACATGACCTACTTCCAGGCATTTTACGA
GCGCTCTCGGAAGCGACTCCTCATCTTCGATTATGACGGGACTCTCGTCC
CTTACCACAGCTTGCCTCAGCTCGCTGCTCCTCCCGCGGAGCTGATTGCC
TGCTTAGAAGCCTTGTGTGACGATCCTCTTAATTTGGTCTTTGTCATCAG
TGGCCGACGCAAGGACGATTTGCAGGAATGGCTCGGGCATATACCTAATC
TAGGTCTGCTTGCCGAGAATGGCTACTGGTGCCGCATTCCCTCGGAGCTG
CACCACCGAGCGCATGGCGGCCTGTCGCACATGTACCAGCACTATCACCC
ATACGCACATCATTCGCACCACCTCTCTCACCCCTCGGGCGCCTCTTTAT
TGTCTTCCGCGTACGGGGAAGGGACGAACTCGCCTTTGACAGCGGGGATA
GGAGGGGGAGGGGGAAGAGGAGGGAGGGAAGGAGAGCGGATAGAGCTTGA
GAGTCCTGCCCCCAGCAAAGACAGCCTGCTAGGCGTCAATCTCGACATTT
TTTCCTCCAATGCCTCAGCCACCCATCTCAACGTCTTTAACTCGGTGGAG
GGCGTGTCTGGTGGCAATCCGGTTCTGTCTTGGGACGGCTGGATATCCAA
GGCCAATCACGTCGACCTCTCCTGGAAAGTGGAGGTCATGGACATATTCG
AATCCTTCACAGACCGCACGCCGGGCTCTTTCCTGGAAGTGAAGGATTCC
TGCCTCTCGTGGCACTACCGCGATGCCGACGCTGATTTTGGGATTGCCCA
GGCCAAGAACCTGCACCAGCACCTGGATCAGATGCTCAAGCATCAGCCCG
TGCGTGTCATCACCTGCCCTGTCAAGAAGTACATCGTCATTCACCCGTCG
CGCCTCAACAAGGGAAGAGCCCTCGTTCATCTCCTGCAGGACTTCGGCGC
TGCCGCCTCCTCCTCCTCCACCGCATTCAACAGCAACAGCACCACCGCCA
TCCCCCTCTCCGCCAGCGCCCCGAGCCTGATCTCCCTCCCTGCAACCCTC
CTCTCCAACTCCAACCTCTCGGCGGCGTCGGACACACCCGGCGCTACTCC
CGTGGAGGGAGGGAGGGAGGGGGGAGGGGTGGCGGGAGGAGGGGGGCTGG
GGGGGGCGGGGAGGGTCTAG

Synonyms

Publications