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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr16 | genome | chr16:707342..709591 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G02460.1 vs.
Match: EWM23941.1 (tyrosine kinase, partial [Nannochloropsis gaditana]) HSP 1 Score: 1092.0 bits (2823), Expect = 0.000e+0 Identity = 528/678 (77.88%), Postives = 583/678 (85.99%), Query Frame = 0
Query: 75 KVPSFATKAEAVEFIKAHCRVGSNRDHRLYQHIFTLLTSWEQLNKYLVVKITHYDRLLGE--SATMAASPSLDPTGNVWLRGPPAEDPDLNVGGVVMALDQRLSLPFHQVLSAPSTINTLKYLFEHMRCGIFVKIKAGQLVMFVPFANDAYANTWAGEMEFDSADGTLETYFQEKMKGGFRKENILPNVAEWWANGNMIDNEKVKAGTDKRFGQVWGDFFFCQLKEMLQAVCQERAVPDCEFFINKRDYPHLKTHHDTNSSSSSHDREAGA---VTAVEPYGFIFGKDDRDPAQDVPLARHAYSSYAPVASFYISSRFADIPWPTTEDWEAATGRVYPHTFMHRFDAETDELVVENEPRDLFTEANFQKFSQVEWRDKVPTAFFRGTATGGGTKVETNQRLKLAHLSHLWSKDGFYNGQENEDFSVPYLDAALTGWNMRDKKIASEPMSFIKKKDFAFKVGKANFVPIYEQARFKYLIYVEGHCAACRYSFLMRLGSVILKVESRCVADEMWYFPLLRPFVDHVPVKADMSDLDEQIQWCREHDAKCQVIAANARRIYDAYCSKEGILDYLQLITHKIAARWHRVPSWWQPSPLGCPRPREGGGGGAGGGRCSCRRCNEDRERISQAAEARARLLEERKARAVQRREAEEASRKRVRREAEEAAGGGEDEEDDEYDGN 748
KVPSF +K EA+ FIK HCRVGSN DH YQH+F+LLTSWE LNKYLV KI +YD+LLG+ +S +D + NVWLR PP + L+V GVV ALDQRL+L H+VLS+PSTINTLKYLFEHMRCGIFVKIKAGQLVMFVPFAND+Y NTWA EMEFDSADGT+ETY+QEKMKGGFRKENILPNVAEWWANGNMIDNEKV+AGTDKRFGQVWGDFF CQLKEMLQAVCQER V DCEFFINKRDYP LKTH + + R + VTAVEPYGFIFGKDDRD QDVPL RHAYSSYAP+AS Y+SSRFADIPWPTTEDWEAATGRVYPHTFMHRFDAETDELVVENEPRDLFTEANFQKFSQV W DK PTAFFRGTATGGGT +ETNQRL+LAHLS+LWS+DGFYNG+ENEDFS PYLDA LTGWNMRDKKIASEPM+FIKKKDFAFKVGK+NFVPIYEQARFKYL+YVEGHCAACRYSFLMRLGSVIL+V+S+CVAD+MWYFPLLRPFVDHVPVK+D+SDLDEQI+WCR+HD++C+ IAANARR+YD YCSKEGILDYLQL+THKIAARWHRVPSWWQPSPLGC RPR G G G RCSCRRCNEDR+R QA + +AR EERK RAV+RR ++ ASRK+ R A G+D + G+
Sbjct: 1 KVPSFTSKKEALAFIKVHCRVGSNPDHSHYQHMFSLLTSWEDLNKYLVAKILYYDKLLGKVSKGPSTSSVGVDLSQNVWLRSPPEDFVGLDVKGVVAALDQRLNLSLHRVLSSPSTINTLKYLFEHMRCGIFVKIKAGQLVMFVPFANDSYTNTWASEMEFDSADGTMETYYQEKMKGGFRKENILPNVAEWWANGNMIDNEKVRAGTDKRFGQVWGDFFLCQLKEMLQAVCQERKVADCEFFINKRDYPQLKTHLRKARTLTDEPRPQDSPAPVTAVEPYGFIFGKDDRDANQDVPLGRHAYSSYAPIASLYVSSRFADIPWPTTEDWEAATGRVYPHTFMHRFDAETDELVVENEPRDLFTEANFQKFSQVPWDDKTPTAFFRGTATGGGTTIETNQRLRLAHLSYLWSQDGFYNGRENEDFSAPYLDAKLTGWNMRDKKIASEPMTFIKKKDFAFKVGKSNFVPIYEQARFKYLVYVEGHCAACRYSFLMRLGSVILRVDSQCVADQMWYFPLLRPFVDHVPVKSDLSDLDEQIKWCRDHDSECRQIAANARRLYDTYCSKEGILDYLQLVTHKIAARWHRVPSWWQPSPLGCQRPR--GPRGGGDDRCSCRRCNEDRKRTHQAGDWKARQHEERKIRAVERRASKMASRKKSR--GARGAEAGQDTSTETMSGS 674
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G02460.1 ID=NO16G02460.1|Name=NO16G02460.1|organism=Nannochloropsis oceanica|type=mRNA|length=2250bp ATGCCGCCCAAGGGGGCCAAGAACGCAGACGGCCAGTCCAAGTCCATCGC CTCTGCAACCTCTACTTCTCCGTCGACGCCTTCCTCAAGAGGCATGGTAG CTCCTATGCGCAAGTTCTCACATGTGTGGAAAGCGCCGGAGTCGACTACG TGGCGGGGAATTTACCGTTGGGAGGATGAGGAGCATGAGGGGTGGAAGGC GGCCCTGACCCAATTCCCGTACAAAGTGCCTTCTTTTGCGACCAAAGCAG AGGCCGTAGAGTTCATCAAAGCGCACTGCCGCGTGGGCAGCAACCGGGAT CACCGCCTGTATCAGCACATCTTCACGCTGCTCACGAGCTGGGAGCAGCT CAATAAATACTTAGTGGTCAAGATCACGCATTACGACCGCCTCCTGGGCG AATCTGCTACCATGGCGGCGTCGCCGTCCCTAGACCCGACCGGAAACGTA TGGTTAAGAGGTCCGCCCGCGGAGGATCCCGATTTGAATGTCGGTGGCGT GGTGATGGCGCTGGACCAGCGATTGAGCCTCCCTTTCCATCAGGTGCTCT CGGCACCGTCCACGATCAACACTCTCAAGTACCTGTTCGAGCACATGCGG TGCGGCATCTTCGTCAAGATTAAGGCAGGCCAGCTGGTCATGTTCGTACC CTTCGCCAACGACGCCTATGCCAACACTTGGGCAGGTGAGATGGAGTTCG ATTCGGCGGACGGCACGTTGGAGACGTACTTCCAGGAGAAGATGAAGGGC GGCTTCCGCAAGGAGAACATCCTGCCCAACGTGGCGGAGTGGTGGGCGAA CGGGAACATGATCGACAACGAGAAGGTCAAGGCGGGCACCGACAAGCGTT TCGGGCAGGTCTGGGGCGACTTCTTCTTCTGCCAGCTCAAAGAGATGCTA CAGGCAGTCTGTCAGGAGAGGGCTGTGCCCGATTGCGAGTTCTTCATCAA CAAACGCGACTACCCTCACCTCAAGACGCACCATGACACCAACAGCAGCA GCAGCAGCCATGACAGGGAAGCAGGCGCTGTGACGGCCGTGGAGCCTTAC GGTTTTATCTTCGGAAAGGATGACCGGGACCCCGCGCAAGACGTGCCCCT GGCCCGGCACGCCTATTCCTCGTACGCGCCCGTGGCCTCCTTCTACATCT CCTCCCGCTTCGCCGACATTCCCTGGCCCACCACCGAGGACTGGGAGGCC GCCACGGGCCGCGTGTACCCCCACACCTTCATGCACCGCTTCGACGCCGA GACTGACGAGCTTGTGGTGGAGAACGAGCCCCGCGACCTCTTCACCGAGG CCAACTTCCAGAAGTTTAGTCAGGTCGAGTGGCGGGACAAGGTGCCCACA GCTTTCTTCCGGGGCACGGCCACAGGCGGCGGTACCAAGGTCGAAACTAA TCAGCGCCTAAAACTCGCCCACCTCAGCCACCTGTGGAGCAAGGATGGGT TCTACAACGGGCAAGAGAACGAGGACTTCTCTGTGCCCTACCTGGACGCG GCGCTGACAGGCTGGAACATGCGCGACAAAAAGATTGCCAGCGAGCCCAT GAGCTTCATTAAGAAAAAAGACTTCGCCTTCAAGGTCGGAAAGGCCAACT TCGTACCCATCTACGAACAGGCGCGCTTTAAATACCTGATCTACGTGGAG GGCCACTGCGCTGCTTGCCGCTACTCCTTCCTCATGCGCCTGGGCTCGGT GATCCTCAAAGTTGAGTCCCGCTGCGTGGCCGATGAGATGTGGTACTTCC CCCTCCTCAGGCCCTTTGTTGACCACGTGCCCGTCAAGGCCGACATGTCG GACCTGGACGAGCAGATCCAGTGGTGCCGCGAGCACGACGCCAAGTGCCA GGTGATTGCAGCCAACGCCCGCCGCATTTACGATGCCTACTGTTCCAAGG AGGGCATTTTGGACTACCTGCAGCTCATCACCCACAAGATTGCTGCGCGC TGGCACCGTGTGCCTTCCTGGTGGCAGCCATCTCCCCTCGGGTGCCCGCG TCCGCGGGAGGGTGGGGGTGGGGGGGCAGGAGGAGGCCGCTGCAGCTGCC GGCGGTGCAACGAAGACCGCGAACGGATCAGCCAGGCTGCGGAGGCCAGG GCGCGCTTGCTGGAAGAACGCAAGGCACGTGCCGTCCAACGCCGGGAAGC CGAGGAGGCGTCTCGCAAACGTGTCCGCAGAGAGGCAGAAGAAGCTGCAG GCGGGGGCGAGGATGAGGAAGACGACGAATACGATGGAAATTTGGCATAA back to topprotein sequence of NO16G02460.1 >NO16G02460.1-protein ID=NO16G02460.1-protein|Name=NO16G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=750bp MPPKGAKNADGQSKSIASATSTSPSTPSSRGMVAPMRKFSHVWKAPESTT WRGIYRWEDEEHEGWKAALTQFPYKVPSFATKAEAVEFIKAHCRVGSNRD HRLYQHIFTLLTSWEQLNKYLVVKITHYDRLLGESATMAASPSLDPTGNV WLRGPPAEDPDLNVGGVVMALDQRLSLPFHQVLSAPSTINTLKYLFEHMR CGIFVKIKAGQLVMFVPFANDAYANTWAGEMEFDSADGTLETYFQEKMKG GFRKENILPNVAEWWANGNMIDNEKVKAGTDKRFGQVWGDFFFCQLKEML QAVCQERAVPDCEFFINKRDYPHLKTHHDTNSSSSSHDREAGAVTAVEPY GFIFGKDDRDPAQDVPLARHAYSSYAPVASFYISSRFADIPWPTTEDWEA ATGRVYPHTFMHRFDAETDELVVENEPRDLFTEANFQKFSQVEWRDKVPT AFFRGTATGGGTKVETNQRLKLAHLSHLWSKDGFYNGQENEDFSVPYLDA ALTGWNMRDKKIASEPMSFIKKKDFAFKVGKANFVPIYEQARFKYLIYVE GHCAACRYSFLMRLGSVILKVESRCVADEMWYFPLLRPFVDHVPVKADMS DLDEQIQWCREHDAKCQVIAANARRIYDAYCSKEGILDYLQLITHKIAAR WHRVPSWWQPSPLGCPRPREGGGGGAGGGRCSCRRCNEDRERISQAAEAR ARLLEERKARAVQRREAEEASRKRVRREAEEAAGGGEDEEDDEYDGNLA* back to topmRNA from alignment at chr16:707342..709591+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G02460.1 ID=NO16G02460.1|Name=NO16G02460.1|organism=Nannochloropsis oceanica|type=mRNA|length=2250bp|location=Sequence derived from alignment at chr16:707342..709591+ (Nannochloropsis oceanica) ATGCCGCCCAAGGGGGCCAAGAACGCAGACGGCCAGTCCAAGTCCATCGC
CTCTGCAACCTCTACTTCTCCGTCGACGCCTTCCTCAAGAGGCATGGTAG
CTCCTATGCGCAAGTTCTCACATGTGTGGAAAGCGCCGGAGTCGACTACG
TGGCGGGGAATTTACCGTTGGGAGGATGAGGAGCATGAGGGGTGGAAGGC
GGCCCTGACCCAATTCCCGTACAAAGTGCCTTCTTTTGCGACCAAAGCAG
AGGCCGTAGAGTTCATCAAAGCGCACTGCCGCGTGGGCAGCAACCGGGAT
CACCGCCTGTATCAGCACATCTTCACGCTGCTCACGAGCTGGGAGCAGCT
CAATAAATACTTAGTGGTCAAGATCACGCATTACGACCGCCTCCTGGGCG
AATCTGCTACCATGGCGGCGTCGCCGTCCCTAGACCCGACCGGAAACGTA
TGGTTAAGAGGTCCGCCCGCGGAGGATCCCGATTTGAATGTCGGTGGCGT
GGTGATGGCGCTGGACCAGCGATTGAGCCTCCCTTTCCATCAGGTGCTCT
CGGCACCGTCCACGATCAACACTCTCAAGTACCTGTTCGAGCACATGCGG
TGCGGCATCTTCGTCAAGATTAAGGCAGGCCAGCTGGTCATGTTCGTACC
CTTCGCCAACGACGCCTATGCCAACACTTGGGCAGGTGAGATGGAGTTCG
ATTCGGCGGACGGCACGTTGGAGACGTACTTCCAGGAGAAGATGAAGGGC
GGCTTCCGCAAGGAGAACATCCTGCCCAACGTGGCGGAGTGGTGGGCGAA
CGGGAACATGATCGACAACGAGAAGGTCAAGGCGGGCACCGACAAGCGTT
TCGGGCAGGTCTGGGGCGACTTCTTCTTCTGCCAGCTCAAAGAGATGCTA
CAGGCAGTCTGTCAGGAGAGGGCTGTGCCCGATTGCGAGTTCTTCATCAA
CAAACGCGACTACCCTCACCTCAAGACGCACCATGACACCAACAGCAGCA
GCAGCAGCCATGACAGGGAAGCAGGCGCTGTGACGGCCGTGGAGCCTTAC
GGTTTTATCTTCGGAAAGGATGACCGGGACCCCGCGCAAGACGTGCCCCT
GGCCCGGCACGCCTATTCCTCGTACGCGCCCGTGGCCTCCTTCTACATCT
CCTCCCGCTTCGCCGACATTCCCTGGCCCACCACCGAGGACTGGGAGGCC
GCCACGGGCCGCGTGTACCCCCACACCTTCATGCACCGCTTCGACGCCGA
GACTGACGAGCTTGTGGTGGAGAACGAGCCCCGCGACCTCTTCACCGAGG
CCAACTTCCAGAAGTTTAGTCAGGTCGAGTGGCGGGACAAGGTGCCCACA
GCTTTCTTCCGGGGCACGGCCACAGGCGGCGGTACCAAGGTCGAAACTAA
TCAGCGCCTAAAACTCGCCCACCTCAGCCACCTGTGGAGCAAGGATGGGT
TCTACAACGGGCAAGAGAACGAGGACTTCTCTGTGCCCTACCTGGACGCG
GCGCTGACAGGCTGGAACATGCGCGACAAAAAGATTGCCAGCGAGCCCAT
GAGCTTCATTAAGAAAAAAGACTTCGCCTTCAAGGTCGGAAAGGCCAACT
TCGTACCCATCTACGAACAGGCGCGCTTTAAATACCTGATCTACGTGGAG
GGCCACTGCGCTGCTTGCCGCTACTCCTTCCTCATGCGCCTGGGCTCGGT
GATCCTCAAAGTTGAGTCCCGCTGCGTGGCCGATGAGATGTGGTACTTCC
CCCTCCTCAGGCCCTTTGTTGACCACGTGCCCGTCAAGGCCGACATGTCG
GACCTGGACGAGCAGATCCAGTGGTGCCGCGAGCACGACGCCAAGTGCCA
GGTGATTGCAGCCAACGCCCGCCGCATTTACGATGCCTACTGTTCCAAGG
AGGGCATTTTGGACTACCTGCAGCTCATCACCCACAAGATTGCTGCGCGC
TGGCACCGTGTGCCTTCCTGGTGGCAGCCATCTCCCCTCGGGTGCCCGCG
TCCGCGGGAGGGTGGGGGTGGGGGGGCAGGAGGAGGCCGCTGCAGCTGCC
GGCGGTGCAACGAAGACCGCGAACGGATCAGCCAGGCTGCGGAGGCCAGG
GCGCGCTTGCTGGAAGAACGCAAGGCACGTGCCGTCCAACGCCGGGAAGC
CGAGGAGGCGTCTCGCAAACGTGTCCGCAGAGAGGCAGAAGAAGCTGCAG
GCGGGGGCGAGGATGAGGAAGACGACGAATACGATGGAAATTTGGCATAA
back to topCoding sequence (CDS) from alignment at chr16:707342..709591+ >NO16G02460.1 ID=NO16G02460.1|Name=NO16G02460.1|organism=Nannochloropsis oceanica|type=CDS|length=2250bp|location=Sequence derived from alignment at chr16:707342..709591+ (Nannochloropsis oceanica) ATGCCGCCCAAGGGGGCCAAGAACGCAGACGGCCAGTCCAAGTCCATCGC CTCTGCAACCTCTACTTCTCCGTCGACGCCTTCCTCAAGAGGCATGGTAG CTCCTATGCGCAAGTTCTCACATGTGTGGAAAGCGCCGGAGTCGACTACG TGGCGGGGAATTTACCGTTGGGAGGATGAGGAGCATGAGGGGTGGAAGGC GGCCCTGACCCAATTCCCGTACAAAGTGCCTTCTTTTGCGACCAAAGCAG AGGCCGTAGAGTTCATCAAAGCGCACTGCCGCGTGGGCAGCAACCGGGAT CACCGCCTGTATCAGCACATCTTCACGCTGCTCACGAGCTGGGAGCAGCT CAATAAATACTTAGTGGTCAAGATCACGCATTACGACCGCCTCCTGGGCG AATCTGCTACCATGGCGGCGTCGCCGTCCCTAGACCCGACCGGAAACGTA TGGTTAAGAGGTCCGCCCGCGGAGGATCCCGATTTGAATGTCGGTGGCGT GGTGATGGCGCTGGACCAGCGATTGAGCCTCCCTTTCCATCAGGTGCTCT CGGCACCGTCCACGATCAACACTCTCAAGTACCTGTTCGAGCACATGCGG TGCGGCATCTTCGTCAAGATTAAGGCAGGCCAGCTGGTCATGTTCGTACC CTTCGCCAACGACGCCTATGCCAACACTTGGGCAGGTGAGATGGAGTTCG ATTCGGCGGACGGCACGTTGGAGACGTACTTCCAGGAGAAGATGAAGGGC GGCTTCCGCAAGGAGAACATCCTGCCCAACGTGGCGGAGTGGTGGGCGAA CGGGAACATGATCGACAACGAGAAGGTCAAGGCGGGCACCGACAAGCGTT TCGGGCAGGTCTGGGGCGACTTCTTCTTCTGCCAGCTCAAAGAGATGCTA CAGGCAGTCTGTCAGGAGAGGGCTGTGCCCGATTGCGAGTTCTTCATCAA CAAACGCGACTACCCTCACCTCAAGACGCACCATGACACCAACAGCAGCA GCAGCAGCCATGACAGGGAAGCAGGCGCTGTGACGGCCGTGGAGCCTTAC GGTTTTATCTTCGGAAAGGATGACCGGGACCCCGCGCAAGACGTGCCCCT GGCCCGGCACGCCTATTCCTCGTACGCGCCCGTGGCCTCCTTCTACATCT CCTCCCGCTTCGCCGACATTCCCTGGCCCACCACCGAGGACTGGGAGGCC GCCACGGGCCGCGTGTACCCCCACACCTTCATGCACCGCTTCGACGCCGA GACTGACGAGCTTGTGGTGGAGAACGAGCCCCGCGACCTCTTCACCGAGG CCAACTTCCAGAAGTTTAGTCAGGTCGAGTGGCGGGACAAGGTGCCCACA GCTTTCTTCCGGGGCACGGCCACAGGCGGCGGTACCAAGGTCGAAACTAA TCAGCGCCTAAAACTCGCCCACCTCAGCCACCTGTGGAGCAAGGATGGGT TCTACAACGGGCAAGAGAACGAGGACTTCTCTGTGCCCTACCTGGACGCG GCGCTGACAGGCTGGAACATGCGCGACAAAAAGATTGCCAGCGAGCCCAT GAGCTTCATTAAGAAAAAAGACTTCGCCTTCAAGGTCGGAAAGGCCAACT TCGTACCCATCTACGAACAGGCGCGCTTTAAATACCTGATCTACGTGGAG GGCCACTGCGCTGCTTGCCGCTACTCCTTCCTCATGCGCCTGGGCTCGGT GATCCTCAAAGTTGAGTCCCGCTGCGTGGCCGATGAGATGTGGTACTTCC CCCTCCTCAGGCCCTTTGTTGACCACGTGCCCGTCAAGGCCGACATGTCG GACCTGGACGAGCAGATCCAGTGGTGCCGCGAGCACGACGCCAAGTGCCA GGTGATTGCAGCCAACGCCCGCCGCATTTACGATGCCTACTGTTCCAAGG AGGGCATTTTGGACTACCTGCAGCTCATCACCCACAAGATTGCTGCGCGC TGGCACCGTGTGCCTTCCTGGTGGCAGCCATCTCCCCTCGGGTGCCCGCG TCCGCGGGAGGGTGGGGGTGGGGGGGCAGGAGGAGGCCGCTGCAGCTGCC GGCGGTGCAACGAAGACCGCGAACGGATCAGCCAGGCTGCGGAGGCCAGG GCGCGCTTGCTGGAAGAACGCAAGGCACGTGCCGTCCAACGCCGGGAAGC CGAGGAGGCGTCTCGCAAACGTGTCCGCAGAGAGGCAGAAGAAGCTGCAG GCGGGGGCGAGGATGAGGAAGACGACGAATACGATGGAAATTTGGCATAA back to top
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