NO16G02260.2, NO16G02260.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO16G02260.2
Unique NameNO16G02260.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7763
Alignment locationchr16:653942..661875 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:653942..661875 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO16G02260.2 vs.
Match: EWM23924.1 (aldo keto reductase [Nannochloropsis gaditana])

HSP 1 Score: 641.3 bits (1653), Expect = 2.400e-180
Identity = 316/459 (68.85%), Postives = 366/459 (79.74%), Query Frame = 0
Query:   28 HAASTSRAITRALEAMEGKPEEELAALHRLKTVFAKHAGGSGSSTATNGELLTALAKAILDDGANEFRVHTSE-LDASHPSCVSSPASAPFKCPTRRFGRTELQMPILTLGGMRMQQTWQPSEGFSMADVTAECQSNFEAIIARALQLGINHIETAKGYGSSELQYGQALRNLGVPRSSYILQTKVRPMADTAEFSRTLDQSFAHLGTHLDLFGFHGINRPEHLEWITRPGGCLEVVREYQHQGKIKFIGFSTHAPTPVIVKAIETGIFDYVNLHYHAIGSYTSSGTSQSVAEGPGNWEALRAAHRKDMGVFIISAADKGGMLYRPPKALVRLCSPLSPLIYNMLWLWNLSTGTTNPSSSSSIDASPSSPPAIHTLVIGAARPSDFNEAAAAAKLFFEMKAEDPSTPLLRRVDERLQKAYREVWGEGWEDDWWMDLPDCYQNPFGVHVAQIVWMWSITK 486
            HAA+TSR I RALE MEG+P EELAA +RLK VF+K++  +  S A + +LLT+LAKAIL +G  E    TS+ L+  +    +S  SA F CPTRRFGRTELQMPI++LGGMR+QQTW+P +GFS ADV  ECQ+NFEAI+ RAL+LGINHIETAKGYGSSELQYG+ALR L  PR SYILQTKVRPM DT EF RTLD+S + LGTHLDLFGFHGINRPEHL+W+ +PGGCLEVV+EYQ +G+I+F+GFSTHAPTP+IVKAI+TGIFDYVNLHYHAIGSYTSSGTS+S + GPGNWEA+ AAHR DMGVFIISAADKGGMLYRPPK LV LCSPL PLIYNMLWLW L  G             PS  PA+HTLVIGAARPSDF+EA  A KL  E++       L+   ++R+ +A REVWGEGW DDWW+ LPDCYQN  GVHVAQIVWMW+ITK
Sbjct:    6 HAAATSRTIMRALEEMEGQPREELAAFYRLKRVFSKYSTHTSGSIACS-DLLTSLAKAILAEGEEEEAEKTSQKLEMHNFFSAASIDSAVFTCPTRRFGRTELQMPIISLGGMRLQQTWKPPDGFSQADVYPECQANFEAILERALELGINHIETAKGYGSSELQYGEALRKLTTPRESYILQTKVRPMPDTDEFRRTLDRSLSLLGTHLDLFGFHGINRPEHLDWVLQPGGCLEVVQEYQQEGRIRFVGFSTHAPTPLIVKAIDTGIFDYVNLHYHAIGSYTSSGTSESPSAGPGNWEAIEAAHRHDMGVFIISAADKGGMLYRPPKVLVGLCSPLPPLIYNMLWLWRLPIG-------------PSGAPAVHTLVIGAARPSDFDEAVRATKLLDEIERGGSEAALMEAAEKRMSQASREVWGEGWADDWWLGLPDCYQNLCGVHVAQIVWMWAITK 450          
The following BLAST results are available for this feature:
BLAST of NO16G02260.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM23924.12.400e-18068.85aldo keto reductase [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02260NO16G02260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO16G02260.2NO16G02260.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO16G02260.2.cds1NO16G02260.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G02260.2.cds2NO16G02260.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G02260.2.cds3NO16G02260.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO16G02260.2 ID=NO16G02260.2|Name=NO16G02260.2|organism=Nannochloropsis oceanica|type=mRNA|length=7763bp
GTGATCGCAGGTCTTTCTATGTTTCTTTGCACAATTATCACAAATTTTGC
TGCTCATGTCATCGTTTGCTCTTTTTAATTCCACCACACATTCATACACT
CGACTTTCTTTTTCTTCTGTAGTTACTTTACTTTTCCTCTAAATCATTGT
CCTACCCCTTTTGTCATCATCGCACCGATGGTAAGGCCGAAGGAAACCCT
CCTTCCCACCTTCCCGTCGTCCCCATTACCCCCAACGACGAGCTCAACCG
GGTGTACTCTGTCAAGGCCACAGCCGACAAGGCCTGAGGGTCCACCCCCT
GCAGCGCCTCGACCGTCGTCCGCTCCCCTGCACTTATTAACACCTCCTCC
AGCATGGTTTCGAGCACACTTGCATCTTTGAGATAAGTCCCAACAGCCTG
TCGCAAGAGCTGCACATCCACCTGCAACTGACAGTATTCCCGACGAGAGA
GCGTAGTCAATCGCGTGCATTCAATTAGCTCCTTGCACGCCGCCTTGAGC
ACGGCCGTCAACACTGACTCCACCCCCAACTCTACAGGCTGCCCAAATAC
TTGAACCTTGACCGTGAAAATACGTTCAATGTCCACATGCACACGCTTAC
TGGCCCCAAACGGCCCTGGAGTTCGTGACAAGTCCGCACGCTCCCCCCTT
CGGCCTCCCAACAACCCCACACCTGCTACAGACACGCCCAGGGCCGCACC
CAGCTCTTTGACCAGAGCTTCCAACCGCAAGATGATGGTCTTGCCCCAAA
TCGCTTGCGTCACACCACCTACACTATTGCTACTGCTGCTGTCACTATTC
GCTGCCTGCGTTTTGGTCAAGAGAGCAAGCTCGTGTCCTTGCCCCTCGAT
GTAATGCTGCAACAACCGAGCAGTACTCCCGTTCAAACACATGACCACAT
CCTCCGGGCTCAGTTTGTTTGTCCCACTGCTACTGCAGCTCGCCCTCCCG
CCGATGTACCCGCCGCTACTCCCCCCACTACCTCCTCCACCACTGCCTCC
CGCACTGCTTGTCATGGTAGCAGGAAAGACAAGGGCAAGAGTGGCGGTAG
CTTGGGACCAGAGAGTGTTCTGCAAACCCCGACAGAGGACGGCCAACAGT
AGAGCATACTGTGGCGAGGCTGCAGCAGCGGTGGTGTGGTTGGGAAAGGT
CATGGTGGGCACTTGCTCGCTGTTCAGGAAAGAGGAGAAGCTAGAGGCAT
GAGCGAAGAATCGCTCAGGGAAGACACGGCGGCGGGCCTCTCCGACTTCC
ACCACGTCGTTTTCGGTTAATCGGAAAGTGACACCAGCCATACGCTCCCC
AGCATCTGCGAGCCAAGTGACGAATTGGAAAACGTACTGGCCCATCCCGA
GTTCCGGCGCCAAGGGCTTCTTATACGCACCGCTGCTGCTGCTGCTACTG
CTGCTGCTGCTGCTCGCGCCACCGTTGTTCTTTAAGCCATCACTGTCGCT
ACTGTTGGTCGGAGGAGACGGAGAAGAGGCTGCTGCTGCTGCTGCTGCGT
CGGCAACCGCATCTTGCACCCCTTCCTCAGCTACTTGCACCACACCTTGC
AGTGTCTCCATGACCCGAGCTAAATCTCGAGCCGTAGCCATCTGAAATCC
CTCCAGCTGCTCCCGCGGTGCAAAGTGCAGCTGTTGCTGCTGCTGCTGCT
GCTGGAGAGCAAGCATCCGCTGCACTGCCGTTACCTGCAGACCTCTAAAT
TCGAGAAATATGAGCCCACGCGCCACGTCCTGCACCAGAGCCACGCCCGC
TTCCAAGACCCCTGCCTCCCTCGTTTGCTTGTGCAACCGCCGAATACTCC
CTTGAAAAAAGTGCTCGAGAGCCTTCAGTGGAAACTGCTTATCGTCTCCC
CTAGGCCCGCTTGCCACGATCGCAAGATTCGCCTTGAACAGCCTCTTGAC
TATCTCCAGGTACTGCCGTGTGAAAAGCGTCCTTACCAAGTCCACCAGCT
CAGCTCCGGCTGTTTCGCTGCTTCCTCTGCCTGCATTGCCACTATCCAAC
ACAAAGACATCCCGAAACATAAATACTGCTTCCTCAAAATCTTTCACAAA
AGCGACATTTAACTTCGTCAAAGCCGCTTCCAATGCCTCCGCACCCGCTG
CCGCCCCCTCCTCTCCCTTGGCCATTTCATTCGCTCGCCGTTCCTCTTCC
CCACGTGAAAACCCTGTCAATGTCTTCCCAAATCGACCGCGGAAGGTCTT
GAGCACCTGGCTCTGTAGCTCGGCCTTCGGCACACCTAACTCAAGGAGCA
GATGAACGTACTGTGCCAGTTGGTCCGGGGTGGCAGGGGCGACCGTGGCG
GTGGTATCAGCTTGCTGTCTGAGGCGGCGGTGGAGCTCGTCGCGGACGCC
GGCGATGATCTGATCAGATTCATGCTGGATGGATTTAAAGGAGGGGACGT
GGTTGTGTTGTCGGAGGATGTCGATTGCCTTGGAGTAGCAGGCTACAGCC
AAGGCAAAATCTTGTCTTTGCACGTAGCGGTTCAAATTGATGGGCAGGTC
AAACAGGAAGTCGAGACGCTTGAGGAGACGGCGGACAGAGACTAGTTTGT
CGACCTTTGCGCGCTTATCGCCCAGGAATGAGTTGACGACTTGCATGCGG
GAGGCGATGCCTTCCATGTTTTTTACCAAGGCGTCCATCTCGGCCTTCAT
GTCGTTCACATTGTTCTTCATGGTTCGAATCGTGTCCGTGGCACTGATAA
ATTTAGAATAATTCTCGTACACCAGCATTTGCATGTCGCTGTCCAGGCGC
TTGACTTCTTGCACGAGCTCGTCGTCTTTGATCAACAGAGTCTCCAAGCT
GTCACGTTCCAGGAGCTGATGGACGTAAGCCTTCATGTGAAAATCGCTCC
TGTCAATCTCGTCGCAGATCTGCTCGTCCCCCCCACCCATCAAGCCATAA
TAGGACGCCAGCAAACTCATAGCATCCCCACCGTTGCCTTTCTGCAGCTG
CTGTTGACCGTGGGAAGATAGGTTTGGGCCGTGCCCCTCTTCCTCCCCGG
CGTCGTAGTCATTCGTGTCATGGTCTCTCTCCTTATCCAGGCCCCCCGCA
GTCGAGTCCATGCGGTCAAAGGTGGCCATGGTAGCCTTTGTGGTGTGGGT
ATAGAGGAAAGGGGAGGGTGTGAGTGGGTGTGCATGTGGACGTGAAAGGT
AAAAGCAAAGGCCAGAACCGTGGCGTCACTTGCGACTTGGGTCGTGCAGC
CATGGCTTTTTGTTTTGGGAACGGACGAGACGACGGGCGCTTTTTGACGA
ACCCATGCAAACACATCGGCCTTGCTTAAGGCTCTACCTTCTTCTCGTGC
CTGTGCAGGTGCGGTGGAGGCGTTGGGGGCGTGAGTGTCGGATGATGTTA
CTGCCGTTGGGGAGCCAGAGCAGCGCGATAGGACTCGGAGGAGACGTTGC
ACTCTGCATCATGCAGGACCTGCACGTGCCCGTCCCACACAATTAATCAA
TGACCACTCATATCACGCTAAAAACAGGAGTGCAACAAGACAGCGGCAGC
AACATCTGTCGGCTCCCGCCATCGCGCCAATCTCCACCAGTAGCAGCCCG
GCAGGATCTCCTGTCTTCCAAGATCAATGTACTACCAAGCTTCGACCTTC
GACCTCCTGTCTCATACGCACCAGCCACGCACACAACACAGCACAGTAAT
GGCGCATCACGCTGCATCGACCTCCCGTGCCATCACGCGCGCCCTTGAGG
CCATGGAAGGCAAGCCCGAGGAGGAGTTGGCGGCATTGCATCGCCTCAAG
ACGGTGTTTGCCAAGCATGCCGGTGGCAGCGGCAGCAGCACCGCTACAAA
CGGTGAATTGTTGACAGCCCTAGCCAAGGCCATTCTCGACGATGGGGCTA
ATGAATTTAGGGTGCACACATCAGAGCTGGATGCGAGCCACCCCTCCTGC
GTTTCTTCCCCCGCCTCGGCTCCCTTCAAATGTCCCACGCGGCGATTCGG
TCGCACAGAGCTTCAGATGCCCATCCTCACTTTGGGTGGCATGCGAATGC
AGCAGACCTGGCAGCCCTCGGAAGGTTTTAGCATGGCCGACGTGACTGCC
GAATGCCAGTCCAATTTTGAGGCCATCATCGCGCGAGCACTGCAGCTGGG
CATTAACCACATTGAGACAGCCAAGGGCTACGGCTCAAGCGAACTTCAGT
ACGGCCAGGCCCTTCGAAACCTCGGGGTGCCCCGATCTTCCTATATCCTC
CAAACCAAAGTCCGCCCCATGGCTGACACTGCCGAGTTCAGCCGTACCCT
TGATCAGTCTTTCGCTCACCTAGGCACCCATCTTGACTTGTTCGGCTTCC
ATGGCATAAACCGACCGGAGCACCTCGAGTGGATCACCCGTCCGGGGGGT
TGCTTGGAGGTCGTGCGAGAATACCAACACCAGGGGAAAATTAAGTTTAT
TGGTTTCTCGACGCATGCACCCACCCCCGTGATTGTCAAGGCGATCGAGA
CGGGTATCTTTGATTATGTCAATTTGCACTACCACGCCATCGGGTCGTAC
ACCAGCTCGGGGACGTCGCAGAGCGTCGCAGAGGGACCGGGGAACTGGGA
GGCACTCAGAGCAGCGCATCGGAAGGATATGGGCGTGTTTATTATCTCAG
CGGCGGATAAAGGAGGGATGCTTTATCGGCCCCCCAAGGCGCTTGTTCGT
CTCTGCTCCCCCCTCTCCCCTCTCATCTATAACATGCTCTGGCTCTGGAA
CCTCTCCACAGGCACTACCAACCCCTCCTCCTCTTCCTCCATCGATGCTT
CCCCCTCCTCCCCCCCCGCCATTCACACCCTTGTTATTGGCGCTGCCCGT
CCCTCTGATTTTAACGAGGCCGCCGCTGCTGCTAAGCTCTTCTTCGAAAT
GAAGGCCGAAGACCCCTCCACTCCACTCTTGCGAAGGGTGGACGAAAGGT
TGCAGAAGGCTTACCGGGAGGTGTGGGGGGAGGGATGGGAGGATGACTGG
TGGATGGACTTGCCGGACTGTTACCAGAATCCGTTTGGGGTGCATGTAGC
GCAGATCGTGTGGATGTGGTCGATCACCAAGGTGAGGGAGGGAGAGAGGG
AGGGAGGGAGAGAGGAAGGGAGGGGGTGAGGGAGAGAGGGAGAGAGGGGT
TTTGGCGTAAAAATGAAACCACTTCTCCCTCTTTGCCCTCGTCCAATTCG
TGATCTGAACCTAATTTTCCTCTCACGTCTCCTCATTCATCCGCTGCTCT
TCATTCGTAGGCCTATGGGCTCCACCGTTACTCTACCATGCAGTACTCCA
AAATGGAGGGCCAAGTGCAGGCCTGGGAGGAGAAAAAAGATCTTCCCCTT
CCCGAGCGCATGGCCGCCGTCTTTGACTGGACACCTGGGCTGCCCTATGA
CCCCTCGGGACCCCACCAGGACCTCACTTCATTCCTCCCCGCTCACCGTG
CGGAGCGTCTCTTGTGTATTCTAAGGGAGGCAAGCTATTGGTTTGGAAAG
GAGACAACGGAAAAGGTGGAGCTGGATCCACGGGAGAAGGAAGGGTGGGT
GGACGCGTATGATCTTCAGCTTGATGTGCCTTTCCCTGAAAGGGTTGCGC
CGTAGCGAGGAAGGGAGGAAGGGATCGAGGGAGGGAAGGAGGGAGGGAGG
GATGGAGGGAAAGAAAGAAGTAGGGATTGTTTTATTGTTTCGCTTGACAG
CTTCAAAAAGGAGGACAACCTGAAGACAGGGGAAGGCGGGGAGAGGAGGG
TGGAGAGATTTGTTGTAAGAAGAGTGTCAATTACTTTGCGGGAAAGGATT
GGACTGCTGACCGTCATACTTTCAACAGATGTGACGTTTGTCTTTGTGTG
TGCGCGTGATTTATAAGTGCATAAGGGATGCACGAGAATGATATATAATA
TGAATATGAAATTACAATATTATAGAAAATGTTTAAGGAATATACCAAAT
CGGCGGATCGGAATCATCCCGAAATGTGTCGCGACGCTAAGGGGAGGCAG
GCTCTGAGTTCATCCATCCGCAAGCAGGAAAGTGACGCTCCTGTTTCCGT
TTCATTTGCATCGTTGATTGCTTGATTTCTAAACTTGGCGGCTCGCTTTT
GTATTACCTCCTCTTCTCCCACTCTCTCTCATCCCTCTCCCTGACACCTC
CTCTTCCACCCTCCCTGCCTCCTCCTCTATACTTAGATAGCTCCCGCCGC
CTTTAATGCCTCTTCCAAGGGTTTATGAAACTCCTCTTCCATCACCGTCA
TAGGTGGGCGAATCCCCGCACCAATCTTACCCATGCGATACAGAGCCCAT
TTGGCCGGGATGGGGTTTGATTGGAGGAATAAGCGTTGGTGCAGCAGCTC
AAGAGGCTTGTTCAACTGCTCAGTCAGCGCCGCGTCTTTGGCGAGGGCCG
CCATCATCAGTTGGTGCATCACATCGGGGACAACATTAGAGGTCACAGAG
ATGACACCATCACCTCCTTTCAGCACAAATTCGGCCCCTGTTTCATCATC
ACCACTGTAAAGCAAAAACTTGTTCCCCGCCACCTTCCGAATGGCCGCCA
CACGCGACACATCTCCCGTGGCTTCCTTGATTCCGATCACGCTCGGGTTC
TTCGCTGCCACCTCTGCCGCGGTTTCAGGCTTGATGTCCGAGCCCGTCCG
GCCTGGGACGTTGTACAGGAGGCAGGGCAAGTCGACCGCTTCGGCGACAT
AGCCGAAGTGAGATACTAGCCCTTTTTGCGTCGGTTTGACATAGTAAGGC
GTCACAACCAAGCTGGCATCGGCTCCATGATTCACTGCCTGCTGTGTCAG
CTTCACGACAGTGCGGGGGTCAATGGTGCCCGTGCCAACCACAATCGGAA
TCTTGCCCTTAATCTCCTCGGCAGTTATGTCCAACACTCGCGCTCGCTCC
TCGAAAGACAAGGTGGAAGCCTCTCCAGTCGTGCCCAGCACAACCACACC
GTCCGTCTGACAAGCCACGTGCCATTGTAAGAGAGTCCGAAGCTGCCCCT
CGTCCACGGCCCCGTCCGGCTTCATCGGCGTTACGAGCGCCACCATGCTG
CCTCTCTTGATAGGCATGCGGGCGCCTTCAACTTTCATCACCACCATGTT
GCGGCGGGAGGTCGTGACAGCTGTGACAGGGAGGGAGGGGACCACGAAAC
CCATGCTACATGTCGTGGCGTAGGCCGCCACCAGGGCCAGGACTGTTGAG
TGTAGGGGTGGGGTAGGGGCAGAGTCGTGACTTGGGGGAGGGCGATTAGA
GGTTCGAGGGTAGTATCGAATATCGATGAGGCTAAAAATTTGCAACAAGC
CCAGAAGTGGGGAGAGACCAAAAGGCTGCACCTACGCCCGAGTTTTTCAG
AGTCTGATCTGATGGGAGTGTGATTTTTTAGCTGCTTGTAGTAGCGGTGC
ATGTGTTGCAGCGCGGACCGCCATCATTTGTTCCCTTGTTTGCTGGAGGC
AGAAAGCAGACAAGGAGAGTGAAAGATGCACATACCTAGCACTTGGCGAA
TCATACTGGCTTGTAAGGTATAGCAGATGGCTTCCCTGTCCTTGAGGTAT
GGTGGTTATGGGGTTTTCAGCGGTGACTTGTAAGGCGGAAAGCCTGAACG
ACTGATGAAGTAAGTAGTGGTGGTGGATGAGGCAAGAGGGGTTGATGATG
CATGGGCCTGCCGCGTTCCCTGTCAAGCAACGCACGACCGTGGACCTTTC
CAGCGGGAGATTGAGGTAGTGTCAAGGGCGCCTTATTTCCACTCCGTTCT
TCTGCAAAGCGATTTATGCCTGGCTTAATTAAGGTGCTTTGCGGTATTTT
CAAGAAAGCTCCG
back to top

protein sequence of NO16G02260.2

>NO16G02260.2-protein ID=NO16G02260.2-protein|Name=NO16G02260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=501bp
MYYQASTFDLLSHTHQPRTQHSTVMAHHAASTSRAITRALEAMEGKPEEE
LAALHRLKTVFAKHAGGSGSSTATNGELLTALAKAILDDGANEFRVHTSE
LDASHPSCVSSPASAPFKCPTRRFGRTELQMPILTLGGMRMQQTWQPSEG
FSMADVTAECQSNFEAIIARALQLGINHIETAKGYGSSELQYGQALRNLG
VPRSSYILQTKVRPMADTAEFSRTLDQSFAHLGTHLDLFGFHGINRPEHL
EWITRPGGCLEVVREYQHQGKIKFIGFSTHAPTPVIVKAIETGIFDYVNL
HYHAIGSYTSSGTSQSVAEGPGNWEALRAAHRKDMGVFIISAADKGGMLY
RPPKALVRLCSPLSPLIYNMLWLWNLSTGTTNPSSSSSIDASPSSPPAIH
TLVIGAARPSDFNEAAAAAKLFFEMKAEDPSTPLLRRVDERLQKAYREVW
GEGWEDDWWMDLPDCYQNPFGVHVAQIVWMWSITKVREGEREGGREEGRG
*
back to top

mRNA from alignment at chr16:653942..661875-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO16G02260.2 ID=NO16G02260.2|Name=NO16G02260.2|organism=Nannochloropsis oceanica|type=mRNA|length=7934bp|location=Sequence derived from alignment at chr16:653942..661875- (Nannochloropsis oceanica)
GTGATCGCAGGTCTTTCTATGTTTCTTTGCACAATTATCACAAATTTTGC TGCTCATGTCATCGTTTGCTCTTTTTAATTCCACCACACATTCATACACT CGACTTTCTTTTTCTTCTGTAGTTACTTTACTTTTCCTCTAAATCATTGT CCTACCCCTTTTGTCATCATCGCACCGATGGTAAGGCCGAAGGAAACCCT CCTTCCCACCTTCCCGTCGTCCCCATTACCCCCAACGACGAGCTCAACCG GGTGTACTCTGTCAAGGCCACAGCCGACAAGGCCTGAGGGTCCACCCCCT GCAGCGCCTCGACCGTCGTCCGCTCCCCTGCACTTATTAACACCTCCTCC AGCATGGTTTCGAGCACACTTGCATCTTTGAGATAAGTCCCAACAGCCTG TCGCAAGAGCTGCACATCCACCTGCAACTGACAGTATTCCCGACGAGAGA GCGTAGTCAATCGCGTGCATTCAATTAGCTCCTTGCACGCCGCCTTGAGC ACGGCCGTCAACACTGACTCCACCCCCAACTCTACAGGCTGCCCAAATAC TTGAACCTTGACCGTGAAAATACGTTCAATGTCCACATGCACACGCTTAC TGGCCCCAAACGGCCCTGGAGTTCGTGACAAGTCCGCACGCTCCCCCCTT CGGCCTCCCAACAACCCCACACCTGCTACAGACACGCCCAGGGCCGCACC CAGCTCTTTGACCAGAGCTTCCAACCGCAAGATGATGGTCTTGCCCCAAA TCGCTTGCGTCACACCACCTACACTATTGCTACTGCTGCTGTCACTATTC GCTGCCTGCGTTTTGGTCAAGAGAGCAAGCTCGTGTCCTTGCCCCTCGAT GTAATGCTGCAACAACCGAGCAGTACTCCCGTTCAAACACATGACCACAT CCTCCGGGCTCAGTTTGTTTGTCCCACTGCTACTGCAGCTCGCCCTCCCG CCGATGTACCCGCCGCTACTCCCCCCACTACCTCCTCCACCACTGCCTCC CGCACTGCTTGTCATGGTAGCAGGAAAGACAAGGGCAAGAGTGGCGGTAG CTTGGGACCAGAGAGTGTTCTGCAAACCCCGACAGAGGACGGCCAACAGT AGAGCATACTGTGGCGAGGCTGCAGCAGCGGTGGTGTGGTTGGGAAAGGT CATGGTGGGCACTTGCTCGCTGTTCAGGAAAGAGGAGAAGCTAGAGGCAT GAGCGAAGAATCGCTCAGGGAAGACACGGCGGCGGGCCTCTCCGACTTCC ACCACGTCGTTTTCGGTTAATCGGAAAGTGACACCAGCCATACGCTCCCC AGCATCTGCGAGCCAAGTGACGAATTGGAAAACGTACTGGCCCATCCCGA GTTCCGGCGCCAAGGGCTTCTTATACGCACCGCTGCTGCTGCTGCTACTG CTGCTGCTGCTGCTCGCGCCACCGTTGTTCTTTAAGCCATCACTGTCGCT ACTGTTGGTCGGAGGAGACGGAGAAGAGGCTGCTGCTGCTGCTGCTGCGT CGGCAACCGCATCTTGCACCCCTTCCTCAGCTACTTGCACCACACCTTGC AGTGTCTCCATGACCCGAGCTAAATCTCGAGCCGTAGCCATCTGAAATCC CTCCAGCTGCTCCCGCGGTGCAAAGTGCAGCTGTTGCTGCTGCTGCTGCT GCTGGAGAGCAAGCATCCGCTGCACTGCCGTTACCTGCAGACCTCTAAAT TCGAGAAATATGAGCCCACGCGCCACGTCCTGCACCAGAGCCACGCCCGC TTCCAAGACCCCTGCCTCCCTCGTTTGCTTGTGCAACCGCCGAATACTCC CTTGAAAAAAGTGCTCGAGAGCCTTCAGTGGAAACTGCTTATCGTCTCCC CTAGGCCCGCTTGCCACGATCGCAAGATTCGCCTTGAACAGCCTCTTGAC TATCTCCAGGTACTGCCGTGTGAAAAGCGTCCTTACCAAGTCCACCAGCT CAGCTCCGGCTGTTTCGCTGCTTCCTCTGCCTGCATTGCCACTATCCAAC ACAAAGACATCCCGAAACATAAATACTGCTTCCTCAAAATCTTTCACAAA AGCGACATTTAACTTCGTCAAAGCCGCTTCCAATGCCTCCGCACCCGCTG CCGCCCCCTCCTCTCCCTTGGCCATTTCATTCGCTCGCCGTTCCTCTTCC CCACGTGAAAACCCTGTCAATGTCTTCCCAAATCGACCGCGGAAGGTCTT GAGCACCTGGCTCTGTAGCTCGGCCTTCGGCACACCTAACTCAAGGAGCA GATGAACGTACTGTGCCAGTTGGTCCGGGGTGGCAGGGGCGACCGTGGCG GTGGTATCAGCTTGCTGTCTGAGGCGGCGGTGGAGCTCGTCGCGGACGCC GGCGATGATCTGATCAGATTCATGCTGGATGGATTTAAAGGAGGGGACGT GGTTGTGTTGTCGGAGGATGTCGATTGCCTTGGAGTAGCAGGCTACAGCC AAGGCAAAATCTTGTCTTTGCACGTAGCGGTTCAAATTGATGGGCAGGTC AAACAGGAAGTCGAGACGCTTGAGGAGACGGCGGACAGAGACTAGTTTGT CGACCTTTGCGCGCTTATCGCCCAGGAATGAGTTGACGACTTGCATGCGG GAGGCGATGCCTTCCATGTTTTTTACCAAGGCGTCCATCTCGGCCTTCAT GTCGTTCACATTGTTCTTCATGGTTCGAATCGTGTCCGTGGCACTGATAA ATTTAGAATAATTCTCGTACACCAGCATTTGCATGTCGCTGTCCAGGCGC TTGACTTCTTGCACGAGCTCGTCGTCTTTGATCAACAGAGTCTCCAAGCT GTCACGTTCCAGGAGCTGATGGACGTAAGCCTTCATGTGAAAATCGCTCC TGTCAATCTCGTCGCAGATCTGCTCGTCCCCCCCACCCATCAAGCCATAA TAGGACGCCAGCAAACTCATAGCATCCCCACCGTTGCCTTTCTGCAGCTG CTGTTGACCGTGGGAAGATAGGTTTGGGCCGTGCCCCTCTTCCTCCCCGG CGTCGTAGTCATTCGTGTCATGGTCTCTCTCCTTATCCAGGCCCCCCGCA GTCGAGTCCATGCGGTCAAAGGTGGCCATGGTAGCCTTTGTGGTGTGGGT ATAGAGGAAAGGGGAGGGTGTGAGTGGGTGTGCATGTGGACGTGAAAGGT AAAAGCAAAGGCCAGAACCGTGGCGTCACTTGCGACTTGGGTCGTGCAGC CATGGCTTTTTGTTTTGGGAACGGACGAGACGACGGGCGCTTTTTGACGA ACCCATGCAAACACATCGGCCTTGCTTAAGGCTCTACCTTCTTCTCGTGC CTGTGCAGGTGCGGTGGAGGCGTTGGGGGCGTGAGTGTCGGATGATGTTA CTGCCGTTGGGGAGCCAGAGCAGCGCGATAGGACTCGGAGGAGACGTTGC ACTCTGCATCATGCAGGACCTGCACGTGCCCGTCCCACACAATTAATCAA TGACCACTCATATCACGCTAAAAACAGGAGTGCAACAAGACAGCGGCAGC AACATCTGTCGGCTCCCGCCATCGCGCCAATCTCCACCAGTAGCAGCCCG GCAGGATCTCCTGTCTTCCAAGATCAATGTACTACCAAGCTTCGACCTTC GACCTCCTGTCTCATACGCACCAGCCACGCACACAACACAGCACAGTAAT GGCGCATCACGCTGCATCGACCTCCCGTGCCATCACGCGCGCCCTTGAGG CCATGGAAGGCAAGCCCGAGGAGGAGTTGGCGGCATTGCATCGCCTCAAG ACGGTGTTTGCCAAGCATGCCGGTGGCAGCGGCAGCAGCACCGCTACAAA CGGTGAATTGTTGACAGCCCTAGCCAAGGCCATTCTCGACGATGGGGCTA ATGAATTTAGGGTGCACACATCAGAGCTGGATGCGAGCCACCCCTCCTGC GTTTCTTCCCCCGCCTCGGCTCCCTTCAAATGTCCCACGCGGCGATTCGG TCGCACAGAGCTTCAGATGCCCATCCTCACTTTGGGTGGCATGCGAATGC AGCAGGTGCGTTTTGGATAATCATCTTCTTTCTAAGTCAATCGTTTCATT GACAAAGTTACATACACATTCACACGCGGACAAACACAGACCTGGCAGCC CTCGGAAGGTTTTAGCATGGCCGACGTGACTGCCGAATGCCAGTCCAATT TTGAGGCCATCATCGCGCGAGCACTGCAGCTGGGCATTAACCACATTGAG ACAGCCAAGGGCTACGGCTCAAGGTACGCCAATTTCTCTTACTTTTCCCT CTCGTTCATTCTCACTATCCCCTCACCCACCCACTCTCCCTCCCTCCTTC CCTTCCCCAGCGAACTTCAGTACGGCCAGGCCCTTCGAAACCTCGGGGTG CCCCGATCTTCCTATATCCTCCAAACCAAAGTCCGCCCCATGGCTGACAC TGCCGAGTTCAGCCGTACCCTTGATCAGTCTTTCGCTCACCTAGGCACCC ATCTTGACTTGTTCGGCTTCCATGGCATAAACCGACCGGAGCACCTCGAG TGGATCACCCGTCCGGGGGGTTGCTTGGAGGTCGTGCGAGAATACCAACA CCAGGGGAAAATTAAGTTTATTGGTTTCTCGACGCATGCACCCACCCCCG TGATTGTCAAGGCGATCGAGACGGGTATCTTTGATTATGTCAATTTGCAC TACCACGCCATCGGGTCGTACACCAGCTCGGGGACGTCGCAGAGCGTCGC AGAGGGACCGGGGAACTGGGAGGCACTCAGAGCAGCGCATCGGAAGGATA TGGGCGTGTTTATTATCTCAGCGGCGGATAAAGGAGGGATGCTTTATCGG CCCCCCAAGGCGCTTGTTCGTCTCTGCTCCCCCCTCTCCCCTCTCATCTA TAACATGCTCTGGCTCTGGAACCTCTCCACAGGCACTACCAACCCCTCCT CCTCTTCCTCCATCGATGCTTCCCCCTCCTCCCCCCCCGCCATTCACACC CTTGTTATTGGCGCTGCCCGTCCCTCTGATTTTAACGAGGCCGCCGCTGC TGCTAAGCTCTTCTTCGAAATGAAGGCCGAAGACCCCTCCACTCCACTCT TGCGAAGGGTGGACGAAAGGTTGCAGAAGGCTTACCGGGAGGTGTGGGGG GAGGGATGGGAGGATGACTGGTGGATGGACTTGCCGGACTGTTACCAGAA TCCGTTTGGGGTGCATGTAGCGCAGATCGTGTGGATGTGGTCGATCACCA AGGTGAGGGAGGGAGAGAGGGAGGGAGGGAGAGAGGAAGGGAGGGGGTGA GGGAGAGAGGGAGAGAGGGGTTTTGGCGTAAAAATGAAACCACTTCTCCC TCTTTGCCCTCGTCCAATTCGTGATCTGAACCTAATTTTCCTCTCACGTC TCCTCATTCATCCGCTGCTCTTCATTCGTAGGCCTATGGGCTCCACCGTT ACTCTACCATGCAGTACTCCAAAATGGAGGGCCAAGTGCAGGCCTGGGAG GAGAAAAAAGATCTTCCCCTTCCCGAGCGCATGGCCGCCGTCTTTGACTG GACACCTGGGCTGCCCTATGACCCCTCGGGACCCCACCAGGACCTCACTT CATTCCTCCCCGCTCACCGTGCGGAGCGTCTCTTGTGTATTCTAAGGGAG GCAAGCTATTGGTTTGGAAAGGAGACAACGGAAAAGGTGGAGCTGGATCC ACGGGAGAAGGAAGGGTGGGTGGACGCGTATGATCTTCAGCTTGATGTGC CTTTCCCTGAAAGGGTTGCGCCGTAGCGAGGAAGGGAGGAAGGGATCGAG GGAGGGAAGGAGGGAGGGAGGGATGGAGGGAAAGAAAGAAGTAGGGATTG TTTTATTGTTTCGCTTGACAGCTTCAAAAAGGAGGACAACCTGAAGACAG GGGAAGGCGGGGAGAGGAGGGTGGAGAGATTTGTTGTAAGAAGAGTGTCA ATTACTTTGCGGGAAAGGATTGGACTGCTGACCGTCATACTTTCAACAGA TGTGACGTTTGTCTTTGTGTGTGCGCGTGATTTATAAGTGCATAAGGGAT GCACGAGAATGATATATAATATGAATATGAAATTACAATATTATAGAAAA TGTTTAAGGAATATACCAAATCGGCGGATCGGAATCATCCCGAAATGTGT CGCGACGCTAAGGGGAGGCAGGCTCTGAGTTCATCCATCCGCAAGCAGGA AAGTGACGCTCCTGTTTCCGTTTCATTTGCATCGTTGATTGCTTGATTTC TAAACTTGGCGGCTCGCTTTTGTATTACCTCCTCTTCTCCCACTCTCTCT CATCCCTCTCCCTGACACCTCCTCTTCCACCCTCCCTGCCTCCTCCTCTA TACTTAGATAGCTCCCGCCGCCTTTAATGCCTCTTCCAAGGGTTTATGAA ACTCCTCTTCCATCACCGTCATAGGTGGGCGAATCCCCGCACCAATCTTA CCCATGCGATACAGAGCCCATTTGGCCGGGATGGGGTTTGATTGGAGGAA TAAGCGTTGGTGCAGCAGCTCAAGAGGCTTGTTCAACTGCTCAGTCAGCG CCGCGTCTTTGGCGAGGGCCGCCATCATCAGTTGGTGCATCACATCGGGG ACAACATTAGAGGTCACAGAGATGACACCATCACCTCCTTTCAGCACAAA TTCGGCCCCTGTTTCATCATCACCACTGTAAAGCAAAAACTTGTTCCCCG CCACCTTCCGAATGGCCGCCACACGCGACACATCTCCCGTGGCTTCCTTG ATTCCGATCACGCTCGGGTTCTTCGCTGCCACCTCTGCCGCGGTTTCAGG CTTGATGTCCGAGCCCGTCCGGCCTGGGACGTTGTACAGGAGGCAGGGCA AGTCGACCGCTTCGGCGACATAGCCGAAGTGAGATACTAGCCCTTTTTGC GTCGGTTTGACATAGTAAGGCGTCACAACCAAGCTGGCATCGGCTCCATG ATTCACTGCCTGCTGTGTCAGCTTCACGACAGTGCGGGGGTCAATGGTGC CCGTGCCAACCACAATCGGAATCTTGCCCTTAATCTCCTCGGCAGTTATG TCCAACACTCGCGCTCGCTCCTCGAAAGACAAGGTGGAAGCCTCTCCAGT CGTGCCCAGCACAACCACACCGTCCGTCTGACAAGCCACGTGCCATTGTA AGAGAGTCCGAAGCTGCCCCTCGTCCACGGCCCCGTCCGGCTTCATCGGC GTTACGAGCGCCACCATGCTGCCTCTCTTGATAGGCATGCGGGCGCCTTC AACTTTCATCACCACCATGTTGCGGCGGGAGGTCGTGACAGCTGTGACAG GGAGGGAGGGGACCACGAAACCCATGCTACATGTCGTGGCGTAGGCCGCC ACCAGGGCCAGGACTGTTGAGTGTAGGGGTGGGGTAGGGGCAGAGTCGTG ACTTGGGGGAGGGCGATTAGAGGTTCGAGGGTAGTATCGAATATCGATGA GGCTAAAAATTTGCAACAAGCCCAGAAGTGGGGAGAGACCAAAAGGCTGC ACCTACGCCCGAGTTTTTCAGAGTCTGATCTGATGGGAGTGTGATTTTTT AGCTGCTTGTAGTAGCGGTGCATGTGTTGCAGCGCGGACCGCCATCATTT GTTCCCTTGTTTGCTGGAGGCAGAAAGCAGACAAGGAGAGTGAAAGATGC ACATACCTAGCACTTGGCGAATCATACTGGCTTGTAAGGTATAGCAGATG GCTTCCCTGTCCTTGAGGTATGGTGGTTATGGGGTTTTCAGCGGTGACTT GTAAGGCGGAAAGCCTGAACGACTGATGAAGTAAGTAGTGGTGGTGGATG AGGCAAGAGGGGTTGATGATGCATGGGCCTGCCGCGTTCCCTGTCAAGCA ACGCACGACCGTGGACCTTTCCAGCGGGAGATTGAGGTAGTGTCAAGGGC GCCTTATTTCCACTCCGTTCTTCTGCAAAGCGATTTATGCCTGGCTTAAT TAAGGTGCTTTGCGGTATTTTCAAGAAAGCTCCG
back to top

Coding sequence (CDS) from alignment at chr16:653942..661875-

>NO16G02260.2 ID=NO16G02260.2|Name=NO16G02260.2|organism=Nannochloropsis oceanica|type=CDS|length=1503bp|location=Sequence derived from alignment at chr16:653942..661875- (Nannochloropsis oceanica)
ATGTACTACCAAGCTTCGACCTTCGACCTCCTGTCTCATACGCACCAGCC
ACGCACACAACACAGCACAGTAATGGCGCATCACGCTGCATCGACCTCCC
GTGCCATCACGCGCGCCCTTGAGGCCATGGAAGGCAAGCCCGAGGAGGAG
TTGGCGGCATTGCATCGCCTCAAGACGGTGTTTGCCAAGCATGCCGGTGG
CAGCGGCAGCAGCACCGCTACAAACGGTGAATTGTTGACAGCCCTAGCCA
AGGCCATTCTCGACGATGGGGCTAATGAATTTAGGGTGCACACATCAGAG
CTGGATGCGAGCCACCCCTCCTGCGTTTCTTCCCCCGCCTCGGCTCCCTT
CAAATGTCCCACGCGGCGATTCGGTCGCACAGAGCTTCAGATGCCCATCC
TCACTTTGGGTGGCATGCGAATGCAGCAGACCTGGCAGCCCTCGGAAGGT
TTTAGCATGGCCGACGTGACTGCCGAATGCCAGTCCAATTTTGAGGCCAT
CATCGCGCGAGCACTGCAGCTGGGCATTAACCACATTGAGACAGCCAAGG
GCTACGGCTCAAGCGAACTTCAGTACGGCCAGGCCCTTCGAAACCTCGGG
GTGCCCCGATCTTCCTATATCCTCCAAACCAAAGTCCGCCCCATGGCTGA
CACTGCCGAGTTCAGCCGTACCCTTGATCAGTCTTTCGCTCACCTAGGCA
CCCATCTTGACTTGTTCGGCTTCCATGGCATAAACCGACCGGAGCACCTC
GAGTGGATCACCCGTCCGGGGGGTTGCTTGGAGGTCGTGCGAGAATACCA
ACACCAGGGGAAAATTAAGTTTATTGGTTTCTCGACGCATGCACCCACCC
CCGTGATTGTCAAGGCGATCGAGACGGGTATCTTTGATTATGTCAATTTG
CACTACCACGCCATCGGGTCGTACACCAGCTCGGGGACGTCGCAGAGCGT
CGCAGAGGGACCGGGGAACTGGGAGGCACTCAGAGCAGCGCATCGGAAGG
ATATGGGCGTGTTTATTATCTCAGCGGCGGATAAAGGAGGGATGCTTTAT
CGGCCCCCCAAGGCGCTTGTTCGTCTCTGCTCCCCCCTCTCCCCTCTCAT
CTATAACATGCTCTGGCTCTGGAACCTCTCCACAGGCACTACCAACCCCT
CCTCCTCTTCCTCCATCGATGCTTCCCCCTCCTCCCCCCCCGCCATTCAC
ACCCTTGTTATTGGCGCTGCCCGTCCCTCTGATTTTAACGAGGCCGCCGC
TGCTGCTAAGCTCTTCTTCGAAATGAAGGCCGAAGACCCCTCCACTCCAC
TCTTGCGAAGGGTGGACGAAAGGTTGCAGAAGGCTTACCGGGAGGTGTGG
GGGGAGGGATGGGAGGATGACTGGTGGATGGACTTGCCGGACTGTTACCA
GAATCCGTTTGGGGTGCATGTAGCGCAGATCGTGTGGATGTGGTCGATCA
CCAAGGTGAGGGAGGGAGAGAGGGAGGGAGGGAGAGAGGAAGGGAGGGGG
TGA
back to top
Synonyms
Publications