|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr16 | genome | chr16:309696..315795 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G00960.1 vs.
Match: XP_005854099.1 (hypothetical protein NGA_0497000 [Nannochloropsis gaditana CCMP526]; EKU22266.1 hypothetical protein NGA_0497000 [Nannochloropsis gaditana CCMP526]; EWM24007.1 armadillo beta-catenin-like repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1853.2 bits (4799), Expect = 0.000e+0 Identity = 941/1129 (83.35%), Postives = 1029/1129 (91.14%), Query Frame = 0
Query: 1 MDAQALQQLEGLCETLYNSSNETERQQAQEQLLSLQSSAEYIPRCQYILDNSHSSYALFVAANALTKLITQFWNNFTVTERVDVRNYVLSYLASQGPQLPDFVATSLIQLVCRITKLGWFDDAQHRELVEEVDKFLHANVEYCIVGLRILNQLVEELNLPTSGRTLTLHRKTAVSFRDLCLFRIFQISLSTLQQVKCRQFTNAAPQQEVKIAEHALNLATRCLSFDFIGTNPDESAEDVGTIQAPNTWRSVVQDPATMTLLLDFYKNTQPPSSSQALQSVILLSSVRRSLFSTDKERAAFLQQLVTAIRDILQTEQGLNYQENYHEFCRLLGRLKANYQLCELVRTEGFTEWCDLAAAFTVRSFQQWQWFSNSIHYLLGLWGRLIAAIPYVPHVPQQPSSTSSSSSRNGGSSSSGVNYREKMQRCVLQVVQSYIKCMIESVEVVAHSDGSLDDPLDDEGSLKEQLERLPVICLFQYSSVASYLMSFLDPIMNAYQEKILKDPSSHRTAQQSP-EAAREMIVLDGQLTWLVYMVGAIIGGHTSEIH-SASSSGDGGATSQEAIDANLASRCLMLAQGLNVRAQQTGGAGPCSPRLELALVYFFQAFRKMYACEMPQTLSMSSVSMAAAAVRMDGGGAMMKAKGYQTVYDLIGLGDQVAVTNIIVIKVGNNLKHWGKNEEVIARTLHLFLEMTMGIGTAKVLLSLDTVQYLLQHHTPEHFPFLAVPANSRHRTSFHATLARLILSVVDERTAAAFEAFMEPILQVLSQLQSTPDIRTEDAKQAIIGACRDLRGITAATQNRKAYCALFELLYPQHFPVFVRAAEVWFDAPEVTTALLKFMQEFVYNKAQRLMFDQSSPNGILLFREASRVLVAYGSRVLQHPFRSDVYKEKYKGIAISLNVLTCALSGNYVNFGVFALYEDPALDDALKIALQMALSIPFQEILAFPKLSKAYFAFFEVLFRNHIPAALSLPTPVFLHVIQAQHEGLQSVDTLLSAQCASTIDYLATYFFQNKAKPDRPPIRALRAHLQAQPDMIFTLLSTLFTQLLFGSVNHWAITRPILSLMLASEEDFNAYKEHMISTQPSPENQVRLREEFMRLCADLQRNLEPSNRERMGQKLTVFRVAVSQFLTS 1128
MDAQ LQQLE LC+ LYNSS+E+ERQQAQ+QLLSLQSSAEYIP+CQYILD+SHSSYALFVAANALTKLITQ+WNNF+V +RV++RNYVLSYLA+QG Q+PDFV TSLIQLVCRITKLGWFDD QHRELVE+V+KFLHANV+YCIVGLRILNQ+VEE NLPTSGRTLTLHRKTAVSFRDLCLF IFQI LSTLQQV+ RQF NA+PQQEVKIAE AL LA R LSFDFIGTNPDESAEDVGTIQ PNTWR +VQ+P TM+L LDFYKNTQPPSSS ALQ+VILLSSVRRSLF+TDK+RAAFLQQLVTAIR+ILQTEQGLN+QENYHEFCRLLGRLKANYQLCELVRTEGF EWCDLAAAFTVRSFQQWQWF NSIHYLLGLWGRLIAAIPY VPQQP T S+S NGG G NYRE MQRCVLQVVQSYIKCM++SVEVV SDG L+DPLDDEGSLK+QLERLPVICLFQY +VA YLMSFLDP++ Y+EK+LK+ S + A +P E A ++ +LDGQLTWLVY+VGAIIGGHTSEIH ++SSS D GA SQE++DANLASRCL+LAQ NVRAQQTGG GPCSPRLELALV FFQ+FRKMYA EMP LSMS S+ +AA+RMD GG MMK K YQTVYDL+GLGDQV +TNIIV KVGNNLK+WGKNE+V++RTL LFLEMTMG G+AKVLLSLD +QYLL HHTPE+FPFL+VPANSRHRTSFH TLARLILSVVDE T+AAFE+FMEPIL+VL +LQ T ++RTE+AKQA+IG CRDLRG+TAATQNRKAYCALFELLYPQ+FPVFVRAAEVWFD PEVTTALLKFMQEFV+NKAQRLMFDQSSPNGILLFREASRVLVAYG+RVLQHPFR DVYKEKYKGIAISLNVLTCALSGNYVNFGVFALY+DPALD+AL + L++ALSIPFQEILAFPKLSKAYFAFFEVLFRNHIPA LSL TPVFL VIQAQHEGLQSVD LLSAQCASTIDYLATY++QNK+K DRPP+RALR HLQAQPD+IFTLLSTLF QLLFGSVNHWAITRP+LSLMLASEEDFNAYKEHMISTQ SPEN+ RLREEF RLC DLQRNLEPSNRER+GQKLTVFRVAVSQFL S
Sbjct: 1 MDAQGLQQLELLCDALYNSSSESERQQAQQQLLSLQSSAEYIPQCQYILDHSHSSYALFVAANALTKLITQYWNNFSVAQRVEIRNYVLSYLANQGHQVPDFVTTSLIQLVCRITKLGWFDDPQHRELVEDVEKFLHANVDYCIVGLRILNQVVEEFNLPTSGRTLTLHRKTAVSFRDLCLFHIFQICLSTLQQVQRRQFANASPQQEVKIAEQALALAVRALSFDFIGTNPDESAEDVGTIQVPNTWRRLVQNPETMSLFLDFYKNTQPPSSSSALQAVILLSSVRRSLFATDKDRAAFLQQLVTAIREILQTEQGLNFQENYHEFCRLLGRLKANYQLCELVRTEGFNEWCDLAAAFTVRSFQQWQWFGNSIHYLLGLWGRLIAAIPY---VPQQP--TGSASGANGG----GKNYRENMQRCVLQVVQSYIKCMVDSVEVVVRSDGGLEDPLDDEGSLKDQLERLPVICLFQYPAVAQYLMSFLDPLLQTYREKVLKNLSPAQLAATAPGETASQLKILDGQLTWLVYVVGAIIGGHTSEIHGTSSSSSDSGAVSQESMDANLASRCLLLAQDFNVRAQQTGGPGPCSPRLELALVSFFQSFRKMYASEMPHMLSMSPASL-SAAIRMDAGGGMMKQKAYQTVYDLMGLGDQVGITNIIVTKVGNNLKYWGKNEDVVSRTLQLFLEMTMGCGSAKVLLSLDPIQYLLHHHTPEYFPFLSVPANSRHRTSFHTTLARLILSVVDEGTSAAFESFMEPILRVLGRLQETTEMRTEEAKQAVIGVCRDLRGVTAATQNRKAYCALFELLYPQYFPVFVRAAEVWFDTPEVTTALLKFMQEFVHNKAQRLMFDQSSPNGILLFREASRVLVAYGTRVLQHPFRVDVYKEKYKGIAISLNVLTCALSGNYVNFGVFALYDDPALDNALDVVLRLALSIPFQEILAFPKLSKAYFAFFEVLFRNHIPAVLSLSTPVFLQVIQAQHEGLQSVDPLLSAQCASTIDYLATYYYQNKSK-DRPPMRALRNHLQAQPDVIFTLLSTLFNQLLFGSVNHWAITRPVLSLMLASEEDFNAYKEHMISTQSSPENRTRLREEFARLCNDLQRNLEPSNRERVGQKLTVFRVAVSQFLAS 1118
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G00960.1 ID=NO16G00960.1|Name=NO16G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=5850bp
TGCTTTAATTGAATAGCATCCATGAACTCTTCCATCCTGAACCCCCACCA
TGTGACATAGGCAGCCCGACCTATCTCTTTTGAAGCAAAACGTTTTTTTA
CTCTCCACTCGAAGGCCAGTCCACGGTCCCCTTCCGTCTTCTTGTCAACC
GCTTGACATACACCTTCCCCCTCTCCTCGTCCATCCCATCCCCCTCCACA
AATAAGTCCACGCACTGCTCCACACTCACATCCTCCACCACCCACCCACC
TACCCCTCCCTCCCCCGGCCCTTCCCCTCCTTCCTCCTGCTCCGCCAGTG
TAAAGAAGGCCAGGTCCAACGCCCGCTTCTCCGGATCATGGTGCGAATAT
GCCACCAGCACTTCCTTCGATCCATCCTCCTCCAAGCACTCCCTGCAAGT
CCACAGCAGCTTTTTATGCTCGCTCCGATTGAAGATCAAGTCGGCGCAGA
TGATAAGATCGAACTTTCGCCTCTTCTTTCCTTCCTTCCCTTCTTCCTCC
ACCCCACCCATCCCCTCCAACGGCGCCAGCAGCGTGTGGACCGGCTGGCC
CCAGACGTAGCCCACCGTGCTTAACGCCCCCTTGGATACGTGCCCTTGTT
CAACCAGTCTATCTACATTGCTTTGCATGGCCTCCACCAAGACTTGGTCG
GTGCTTGAGGCATAATCAGAGGCAACCACATGCTTCGCTCCATTCAATGC
AGCCAGGAGGGAGGGAAGAGCGCATCCCGCGCCGAGTTCAAGAACCGTCT
TTCCCCGCACGAGGGAGGGGTCAAGTTCGAGCATTTCACCGAGGACCTTA
GCCGCATTCCAGACTTTGTGTCCTGTTGCATCCATGCATAGAGATGGGAG
GGAAAGATAAGGGGGCAATGATCTACATCCGTCCCTCCACAGCACGTACC
CCACAAACTATGTCGTCCCGCGGCCAGGCTTAGTTCCAGCGTCGGAGGAT
CTGCCTTGGGATCGAGACGTGTATAAGTCTCGCTGACAAATGTAGGGCCC
TTCTCCTCAGTATTACTGTCATCATTATCACTATTTACGCTCCCCACGCC
CCCGCCGACGGCGAATAGGGAGAGGAGGCCCTCCTCGAGCTCTTGATCAA
CTTCGCTCTCGTTATCGGCTTCCTGGGTTGGGGGGCGGACATGCACGCCT
TCCATTTGCAAGAAGCTCTATTGGTGTGTGAAGAGATGATGAAATAAATA
CCAAGGAAATGGCGTCTCAAAAACGCCTTGGGGTGGAAAGTAGATAGGAA
GAAATGGAAGCTTAAGAAAGGTATCTCTGCTGGAGGCGTCGGAGTTGCCT
TGCTATCATGTCAACGTACCTTAAGGATGTGGCGCGCCGCCATCTCCGCC
TGGGCAGATTGCCTTGCCGCCACCTCTTGCACACGTTCTTTGGGCTCCAT
CCTGTAGTGGGTGGCGTGATGTGATCGGAAACGCGTAAATGCGAGAAGCC
TTTCGACCTCCCCTCCCCCCTCATGTTGTACAGAGGAAGAATGATGCTAC
CGGCTGCCCGGAGGAGATACCGACAGGTCAAGAATTGGGGAGTGGCTGAC
TGAATTTGTGTCTTTGCCCACGATCACACGCATCAACTCATCCACGTCTA
CACTGGACTTCCATTCGGTGACGGCGACAATGCTGCGTTGCGCGGCCTTG
CCTCTAGCTTGCTGCTTGAGCCTCGCCCTTGGCGACGCCGTTGTTGTCGC
TCCAGCAAGAAGCCTTCCATGCCTTGCATTTGGCATTGCTATTCAGACCT
CTCACCACCGCCGGGACCCCGCCAATTCACTATACATGCTTACAGATTTT
CAGAGCCTGCACGTAATTACCCGCTGCCATTGCCTGTCACTCAAGGGCAT
ATCAGAGCCTCTTTCCCTGGCCCCCTGCTTTCAGCCGCTCGCCCTCTCTC
CACTAGTGCAACCGCAACGTCGTCGTTCCATGACTTCTGACTGCCATAGG
GCAAAGAGTTAGCTGCTCATTCGCACTGCCAAGACAATTTAAACGCGTAG
CAATTTCCGGCTGCTGCCGCTGTCATCGTGGCTGTCGTGCTGGAGCGGCT
GGCAATCCCCCGTCATCACCCTCGCCTTGCTCCCAGTAACAGCAGCAATA
CTAACATCCCACTCCCATGGACGCCCAAGCCTTGCAACAGCTCGAAGGGC
TGTGTGAAACCCTGTATAACAGCAGTAACGAGACGGAGCGCCAGCAGGCC
CAAGAGCAACTTCTTTCCTTGCAGTCCTCTGCGGAATATATTCCCCGATG
CCAGTACATTCTTGACAACTCCCACTCCTCCTACGCCTTATTCGTGGCAG
CCAATGCCCTTACCAAGCTCATCACACAGTTCTGGAACAACTTTACAGTC
ACCGAGCGCGTCGATGTACGGAACTACGTCCTTTCCTACCTAGCAAGTCA
AGGTCCGCAGCTGCCTGATTTTGTCGCTACCAGCCTCATTCAACTTGTCT
GCCGCATCACCAAACTCGGCTGGTTCGATGACGCCCAGCACAGGGAGCTC
GTGGAGGAGGTTGATAAATTTTTGCATGCCAACGTGGAGTACTGCATTGT
CGGGCTTCGGATTCTTAATCAGTTGGTAGAGGAATTGAATCTTCCCACCT
CTGGTCGCACCCTCACCCTCCACCGCAAGACGGCAGTCTCCTTCCGGGAC
CTCTGCTTGTTCCGCATATTTCAGATAAGCCTCTCTACGCTGCAGCAGGT
GAAATGTCGACAATTTACCAATGCAGCCCCCCAGCAAGAGGTGAAAATCG
CAGAGCATGCCCTCAACCTCGCCACGCGCTGCCTCTCCTTCGATTTCATA
GGGACAAACCCGGACGAGTCCGCCGAAGATGTGGGCACAATCCAAGCCCC
CAACACTTGGCGAAGTGTCGTTCAAGACCCCGCCACCATGACCCTCTTAC
TCGACTTCTACAAAAACACCCAACCCCCGTCCTCCTCCCAAGCCCTCCAA
TCGGTCATCCTCCTTTCCTCCGTCCGCCGCTCCCTCTTTTCCACGGACAA
GGAACGCGCAGCTTTCCTGCAGCAGCTGGTCACGGCGATCCGGGACATAC
TACAGACGGAGCAAGGGCTGAATTATCAAGAGAATTATCACGAGTTTTGT
CGATTGCTTGGGCGGTTGAAAGCCAACTACCAGCTATGCGAGCTAGTGAG
GACGGAAGGCTTCACTGAATGGTGCGATTTGGCCGCGGCGTTTACAGTGC
GGAGTTTCCAGCAGTGGCAGTGGTTCAGTAATTCTATTCATTATCTGCTC
GGATTGTGGGGGAGGTTAATTGCCGCTATACCCTATGTGCCACACGTGCC
ACAGCAGCCTTCCTCTACCTCTTCCTCGAGTAGCAGAAATGGCGGGAGCA
GTAGCAGTGGCGTGAACTATAGAGAAAAAATGCAGAGGTGTGTGTTGCAG
GTGGTGCAGTCGTATATTAAATGTATGATTGAATCAGTCGAGGTAGTCGC
GCATTCGGACGGTAGCTTGGACGATCCCCTCGACGACGAAGGCTCGCTCA
AAGAGCAATTGGAACGGCTTCCCGTTATATGCCTCTTCCAGTACTCCTCT
GTTGCATCGTATCTTATGTCATTCCTTGATCCTATCATGAATGCGTATCA
AGAAAAAATCCTCAAGGACCCTTCATCACACCGGACGGCGCAGCAAAGCC
CGGAGGCGGCAAGAGAAATGATCGTGTTGGACGGGCAATTAACCTGGTTG
GTTTATATGGTGGGCGCCATCATAGGAGGACATACCAGTGAAATCCACAG
CGCGAGTTCTTCGGGCGATGGAGGGGCCACGAGCCAGGAGGCAATCGATG
CAAATTTGGCGTCGAGATGCTTGATGCTCGCTCAGGGGTTGAATGTGCGG
GCGCAGCAGACAGGGGGGGCGGGACCATGCAGCCCGAGGTTGGAATTAGC
ATTGGTTTATTTCTTCCAGGCATTTCGTAAAATGTATGCGTGTGAGATGC
CGCAAACGTTGTCCATGTCCTCGGTGTCGATGGCGGCGGCAGCCGTGAGA
ATGGATGGGGGAGGGGCGATGATGAAGGCGAAGGGTTACCAGACCGTCTA
CGACTTGATTGGACTGGGGGATCAGGTGGCTGTGACCAACATAATTGTGA
TTAAGGTGGGCAACAACCTCAAGCACTGGGGCAAGAACGAGGAGGTCATA
GCCCGTACCCTCCACCTCTTCCTCGAAATGACCATGGGCATCGGGACTGC
CAAGGTCCTCCTCTCACTTGACACGGTCCAATACCTTCTCCAACACCACA
CCCCCGAGCACTTCCCCTTCTTAGCCGTTCCTGCAAATAGCCGGCATCGC
ACGTCATTCCATGCTACTCTGGCGAGGCTCATCCTCTCCGTTGTCGACGA
GAGGACGGCCGCGGCGTTTGAGGCGTTCATGGAACCGATCCTCCAGGTAC
TAAGCCAGCTACAGAGCACCCCGGACATTCGGACAGAAGATGCCAAGCAA
GCCATCATTGGCGCCTGTCGAGATCTGCGAGGCATCACGGCCGCCACCCA
GAACCGAAAAGCCTATTGTGCATTGTTCGAATTGCTCTACCCCCAGCATT
TCCCGGTGTTTGTCCGCGCGGCCGAGGTCTGGTTTGACGCACCTGAAGTG
ACCACGGCCCTGCTTAAATTCATGCAAGAATTTGTGTACAACAAGGCGCA
AAGGCTCATGTTTGATCAGAGCTCTCCAAATGGGATTTTGTTATTCAGAG
AGGCGAGTCGTGTGTTGGTCGCGTATGGCTCTCGGGTGTTACAGCATCCG
TTCAGGTCGGACGTGTACAAGGAGAAATACAAGGGTATTGCGATATCGCT
TAATGTCCTTACATGTGCCCTATCGGGGAACTACGTGAATTTTGGCGTCT
TTGCCCTGTACGAAGACCCGGCCTTGGACGATGCCCTTAAAATTGCCCTC
CAAATGGCCCTCTCCATCCCCTTCCAAGAAATTCTTGCCTTCCCCAAGCT
TAGTAAAGCCTACTTTGCCTTCTTTGAGGTCCTCTTCCGAAACCACATCC
CGGCCGCGCTTTCCCTCCCTACTCCCGTCTTTCTTCACGTCATCCAGGCC
CAGCACGAAGGGTTGCAGTCGGTCGACACCCTCCTCTCTGCCCAATGCGC
CTCCACTATCGACTATCTCGCCACCTACTTCTTCCAGAACAAGGCCAAGC
CAGACCGTCCCCCCATCCGTGCCCTTCGCGCTCACCTACAAGCGCAACCC
GACATGATTTTCACCCTCCTCTCCACCCTCTTCACGCAACTCCTTTTTGG
CTCAGTCAACCACTGGGCCATCACCCGTCCTATCCTCTCTCTCATGCTTG
CGTCCGAGGAAGATTTTAATGCTTACAAGGAACACATGATTAGCACACAG
CCCTCCCCTGAGAATCAAGTGAGACTTCGGGAAGAATTCATGAGGTTGTG
TGCGGATCTTCAACGGAATCTGGAGCCCAGCAATAGGGAGAGGATGGGCC
AAAAGCTAACCGTCTTCCGGGTAGCTGTTTCCCAGTTTTTGACGAGCTGA
AGGGCGGGGGAAGGGAAGGAGGGAACTAAGGGAGGAGTTGGAAGGGTGGA
GCTTGAGCTGCACAGATTTCGACGGGTAAGGGAGAAATAAAGGAAGGAAA
GGAGGGAGGAAGGGAGGAAGGGGAGATGAAACGGGCATCTGAAAGGGAGA
GCGTCGCGAACATGTGACGGAGACGAGGAGTGCAAAGAAGGGGGGGTGGG
ACTGGGTAGGAAATAGAAGACGTAGGAGAAGATAGGAAGTATAAGTGATA
TAGAACGAGAGAAAAAGACAGGGCAGGAAGACATAAACAGAAATAAAGGA
AGGAAAATAGAGAGCGATAGGAAAGCTGAACAGTCATAACGATGCCCGCA back to topprotein sequence of NO16G00960.1 >NO16G00960.1-protein ID=NO16G00960.1-protein|Name=NO16G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1128bp
MDAQALQQLEGLCETLYNSSNETERQQAQEQLLSLQSSAEYIPRCQYILD
NSHSSYALFVAANALTKLITQFWNNFTVTERVDVRNYVLSYLASQGPQLP
DFVATSLIQLVCRITKLGWFDDAQHRELVEEVDKFLHANVEYCIVGLRIL
NQLVEELNLPTSGRTLTLHRKTAVSFRDLCLFRIFQISLSTLQQVKCRQF
TNAAPQQEVKIAEHALNLATRCLSFDFIGTNPDESAEDVGTIQAPNTWRS
VVQDPATMTLLLDFYKNTQPPSSSQALQSVILLSSVRRSLFSTDKERAAF
LQQLVTAIRDILQTEQGLNYQENYHEFCRLLGRLKANYQLCELVRTEGFT
EWCDLAAAFTVRSFQQWQWFSNSIHYLLGLWGRLIAAIPYVPHVPQQPSS
TSSSSSRNGGSSSSGVNYREKMQRCVLQVVQSYIKCMIESVEVVAHSDGS
LDDPLDDEGSLKEQLERLPVICLFQYSSVASYLMSFLDPIMNAYQEKILK
DPSSHRTAQQSPEAAREMIVLDGQLTWLVYMVGAIIGGHTSEIHSASSSG
DGGATSQEAIDANLASRCLMLAQGLNVRAQQTGGAGPCSPRLELALVYFF
QAFRKMYACEMPQTLSMSSVSMAAAAVRMDGGGAMMKAKGYQTVYDLIGL
GDQVAVTNIIVIKVGNNLKHWGKNEEVIARTLHLFLEMTMGIGTAKVLLS
LDTVQYLLQHHTPEHFPFLAVPANSRHRTSFHATLARLILSVVDERTAAA
FEAFMEPILQVLSQLQSTPDIRTEDAKQAIIGACRDLRGITAATQNRKAY
CALFELLYPQHFPVFVRAAEVWFDAPEVTTALLKFMQEFVYNKAQRLMFD
QSSPNGILLFREASRVLVAYGSRVLQHPFRSDVYKEKYKGIAISLNVLTC
ALSGNYVNFGVFALYEDPALDDALKIALQMALSIPFQEILAFPKLSKAYF
AFFEVLFRNHIPAALSLPTPVFLHVIQAQHEGLQSVDTLLSAQCASTIDY
LATYFFQNKAKPDRPPIRALRAHLQAQPDMIFTLLSTLFTQLLFGSVNHW
AITRPILSLMLASEEDFNAYKEHMISTQPSPENQVRLREEFMRLCADLQR
NLEPSNRERMGQKLTVFRVAVSQFLTS* back to topmRNA from alignment at chr16:309696..315795- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G00960.1 ID=NO16G00960.1|Name=NO16G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=6100bp|location=Sequence derived from alignment at chr16:309696..315795- (Nannochloropsis oceanica)
TGCTTTAATTGAATAGCATCCATGAACTCTTCCATCCTGAACCCCCACCA
TGTGACATAGGCAGCCCGACCTATCTCTTTTGAAGCAAAACGTTTTTTTA
CTCTCCACTCGAAGGCCAGTCCACGGTCCCCTTCCGTCTTCTTGTCAACC
GCTTGACATACACCTTCCCCCTCTCCTCGTCCATCCCATCCCCCTCCACA
AATAAGTCCACGCACTGCTCCACACTCACATCCTCCACCACCCACCCACC
TACCCCTCCCTCCCCCGGCCCTTCCCCTCCTTCCTCCTGCTCCGCCAGTG
TAAAGAAGGCCAGGTCCAACGCCCGCTTCTCCGGATCATGGTGCGAATAT
GCCACCAGCACTTCCTTCGATCCATCCTCCTCCAAGCACTCCCTGCAAGT
CCACAGCAGCTTTTTATGCTCGCTCCGATTGAAGATCAAGTCGGCGCAGA
TGATAAGATCGAACTTTCGCCTCTTCTTTCCTTCCTTCCCTTCTTCCTCC
ACCCCACCCATCCCCTCCAACGGCGCCAGCAGCGTGTGGACCGGCTGGCC
CCAGACGTAGCCCACCGTGCTTAACGCCCCCTTGGATACGTGCCCTTGTT
CAACCAGTCTATCTACATTGCTTTGCATGGCCTCCACCAAGACTTGGTCG
GTGCTTGAGGCATAATCAGAGGCAACCACATGCTTCGCTCCATTCAATGC
AGCCAGGAGGGAGGGAAGAGCGCATCCCGCGCCGAGTTCAAGAACCGTCT
TTCCCCGCACGAGGGAGGGGTCAAGTTCGAGCATTTCACCGAGGACCTTA
GCCGCATTCCAGACTTTGTGTCCTGTTGCATCCATGCATAGAGATGGGAG
GGAAAGATAAGGGGGCAATGATCTACATCCGTCCCTCCACAGCACGTACC
CCACAAACTATGTCGTCCCGCGGCCAGGCTTAGTTCCAGCGTCGGAGGAT
CTGCCTTGGGATCGAGACGTGTATAAGTCTCGCTGACAAATGTAGGGCCC
TTCTCCTCAGTATTACTGTCATCATTATCACTATTTACGCTCCCCACGCC
CCCGCCGACGGCGAATAGGGAGAGGAGGCCCTCCTCGAGCTCTTGATCAA
CTTCGCTCTCGTTATCGGCTTCCTGGGTTGGGGGGCGGACATGCACGCCT
TCCATTTGCAAGAAGCTCTATTGGTGTGTGAAGAGATGATGAAATAAATA
CCAAGGAAATGGCGTCTCAAAAACGCCTTGGGGTGGAAAGTAGATAGGAA
GAAATGGAAGCTTAAGAAAGGTATCTCTGCTGGAGGCGTCGGAGTTGCCT
TGCTATCATGTCAACGTACCTTAAGGATGTGGCGCGCCGCCATCTCCGCC
TGGGCAGATTGCCTTGCCGCCACCTCTTGCACACGTTCTTTGGGCTCCAT
CCTGTAGTGGGTGGCGTGATGTGATCGGAAACGCGTAAATGCGAGAAGCC
TTTCGACCTCCCCTCCCCCCTCATGTTGTACAGAGGAAGAATGATGCTAC
CGGCTGCCCGGAGGAGATACCGACAGGTCAAGAATTGGGGAGTGGCTGAC
TGAATTTGTGTCTTTGCCCACGATCACACGCATCAACTCATCCACGTCTA
CACTGGACTTCCATTCGGTGACGGCGACAATGCTGCGTTGCGCGGCCTTG
CCTCTAGCTTGCTGCTTGAGCCTCGCCCTTGGCGACGCCGTTGTTGTCGC
TCCAGCAAGAAGCCTTCCATGCCTTGCATTTGGCATTGCTATTCAGACCT
CTCACCACCGCCGGGACCCCGCCAATTCACTATACATGCTTACAGATTTT
CAGAGCCTGCACGTAATTACCCGCTGCCATTGCCTGTCACTCAAGGGCAT
ATCAGAGCCTCTTTCCCTGGCCCCCTGCTTTCAGCCGCTCGCCCTCTCTC
CACTAGTGCAACCGCAACGTCGTCGTTCCATGACTTCTGACTGCCATAGG
GCAAAGAGTTAGCTGCTCATTCGCACTGCCAAGACAATTTAAACGCGTAG
CAATTTCCGGCTGCTGCCGCTGTCATCGTGGCTGTCGTGCTGGAGCGGCT
GGCAATCCCCCGTCATCACCCTCGCCTTGCTCCCAGTAACAGCAGCAATA
CTAACATCCCACTCCCATGGACGCCCAAGCCTTGCAACAGCTCGAAGGGC
TGTGTGAAACCCTGTATAACAGCAGTAACGAGACGGAGCGCCAGCAGGCC
CAAGAGCAACTTCTTTCCTTGCAGTCCTCTGCGGAATATATTCCCCGATG
CCAGTACATTCTTGACAACTCCCACTCCTCCTACGCCTTATTCGTGGCAG
CCAATGCCCTTACCAAGCTCATCACACAGTTCTGGAACAACTTTACAGTC
ACCGAGCGCGTCGATGTACGGAACTACGTCCTTTCCTACCTAGCAAGTCA
AGGTCCGCAGCTGCCTGATTTTGTCGCTACCAGCCTCATTCAACTTGTCT
GCCGCATCACCAAACTCGGCTGGTTCGATGACGCCCAGCACAGGGAGCTC
GTGGAGGAGGTTGATAAATTTTTGCATGCCAACGTGGAGTACTGCATTGT
CGGGCTTCGGATTCTTAATCAGTTGGTAGAGGAATTGAATCTTCCCACCT
CTGGTCGCACCCTCACCCTCCACCGCAAGACGGCAGTCTCCTTCCGGGAC
CTCTGCTTGTTCCGCATATTTCAGATAAGCCTCTCTACGCTGCAGCAGGT
GAAATGTCGACAATTTACCAATGCAGCCCCCCAGCAAGAGGTGAAAATCG
CAGAGCATGCCCTCAACCTCGCCACGCGCTGCCTCTCCTTCGATTTCATA
GGGACAAACCCGGACGAGTCCGCCGAAGATGTGGGCACAATCCAAGCCCC
CAACACTTGGCGAAGTGTCGTTCAAGACCCCGCCACCATGACCCTCTTAC
TCGACTTCTACAAAAACACCCAACCCCCGTCCTCCTCCCAAGCCCTCCAA
TCGGTCATCCTCCTTTCCTCCGTCCGCCGCTCCCTCTTTTCCACGGACAA
GGAACGCGCAGCTTTCCTGCAGCAGCTGGTCACGGCGATCCGGGACATAC
TACAGACGGAGCAAGGGCTGAATTATCAAGAGAATTATCACGAGTTTTGT
CGATTGCTTGGGCGGTTGAAAGCCAACTACCAGCTATGCGAGCTAGTGAG
GACGGAAGGCTTCACTGAATGGTGCGATTTGGCCGCGGCGTTTACAGTGC
GGAGTTTCCAGCAGTGGCAGTGGTTCAGTAATTCTATTCATTATCTGCTC
GGATTGTGGGGGAGGTTAATTGCCGCTATACCCTATGTGCCACACGTGCC
ACAGCAGCCTTCCTCTACCTCTTCCTCGAGTAGCAGAAATGGCGGGAGCA
GTAGCAGTGGCGTGAACTATAGAGAAAAAATGCAGAGGTGTGTGTTGCAG
GTGGTGCAGTCGTATATTAAATGTATGATTGAATCAGTCGAGGTAGTCGC
GCATTCGGACGGTAGCTTGGACGATCCCCTCGACGACGAAGGCTCGCTCA
AAGAGCAATTGGAACGGCTTCCCGTTATATGCCTCTTCCAGTACTCCTCT
GTTGCATCGTATCTTATGTCATTCCTTGATCCTATCATGAATGCGTATCA
AGAAAAAATCCTCAAGGACCCTTCATCACACCGGACGGCGCAGCAAAGCC
CGGAGGCGGCAAGAGAAATGATCGTGTTGGACGGGCAATTAACCTGGTTG
GTTTATATGGTGGGCGCCATCATAGGAGGACATACCAGTGAAATCCACAG
CGCGAGTTCTTCGGGCGATGGAGGGGCCACGAGCCAGGAGGCAATCGATG
CAAATTTGGCGTCGAGATGCTTGATGCTCGCTCAGGGGTTGAATGTGCGG
GCGCAGCAGACAGGGGGGGCGGGACCATGCAGCCCGAGGTTGGAATTAGC
ATTGGTTTATTTCTTCCAGGCATTTCGTAAAATGTATGCGTGTGAGATGC
CGCAAACGTTGTCCATGTCCTCGGTGTCGATGGCGGCGGCAGCCGTGAGA
ATGGATGGGGGAGGGGCGATGATGAAGGCGAAGGGTTACCAGACCGTCTA
CGACTTGATTGGACTGGGGGATCAGGTGGCTGTGACCAACATAATTGTGA
TTAAGGTATGTCTGTTTCTGCTTTTGTTTGTATGACAGTCTCTCCATCCA
TCTCACTTTTGCTCTGGAGTGTTTGATGATTTGATTGATTGTCTTTGATG
TGCATTTTCATTCATGTATGTTGTTTTGCTAGATGTAAGTCAGGCTTTCC
ATCCTGCCGTCCTCTTGCCGCCGCAGTAAGACATGATACATGGCCTTCGT
CGTCCGCGTCATTCATCCTTTCTTCCTCCCTCCCTTCGTTCCTCCCCTTT
ATCAGGTGGGCAACAACCTCAAGCACTGGGGCAAGAACGAGGAGGTCATA
GCCCGTACCCTCCACCTCTTCCTCGAAATGACCATGGGCATCGGGACTGC
CAAGGTCCTCCTCTCACTTGACACGGTCCAATACCTTCTCCAACACCACA
CCCCCGAGCACTTCCCCTTCTTAGCCGTTCCTGCAAATAGCCGGCATCGC
ACGTCATTCCATGCTACTCTGGCGAGGCTCATCCTCTCCGTTGTCGACGA
GAGGACGGCCGCGGCGTTTGAGGCGTTCATGGAACCGATCCTCCAGGTAC
TAAGCCAGCTACAGAGCACCCCGGACATTCGGACAGAAGATGCCAAGCAA
GCCATCATTGGCGCCTGTCGAGATCTGCGAGGCATCACGGCCGCCACCCA
GAACCGAAAAGCCTATTGTGCATTGTTCGAATTGCTCTACCCCCAGCATT
TCCCGGTGTTTGTCCGCGCGGCCGAGGTCTGGTTTGACGCACCTGAAGTG
ACCACGGCCCTGCTTAAATTCATGCAAGAATTTGTGTACAACAAGGCGCA
AAGGCTCATGTTTGATCAGAGCTCTCCAAATGGGATTTTGTTATTCAGAG
AGGCGAGTCGTGTGTTGGTCGCGTATGGCTCTCGGGTGTTACAGCATCCG
TTCAGGTCGGACGTGTACAAGGAGAAATACAAGGGTATTGCGATATCGCT
TAATGTCCTTACATGTGCCCTATCGGGGAACTACGTGAATTTTGGCGTCT
TTGCCCTGTACGAAGACCCGGCCTTGGACGATGCCCTTAAAATTGCCCTC
CAAATGGCCCTCTCCATCCCCTTCCAAGAAATTCTTGCCTTCCCCAAGCT
TAGTAAAGCCTACTTTGCCTTCTTTGAGGTCCTCTTCCGAAACCACATCC
CGGCCGCGCTTTCCCTCCCTACTCCCGTCTTTCTTCACGTCATCCAGGCC
CAGCACGAAGGGTTGCAGTCGGTCGACACCCTCCTCTCTGCCCAATGCGC
CTCCACTATCGACTATCTCGCCACCTACTTCTTCCAGAACAAGGCCAAGC
CAGACCGTCCCCCCATCCGTGCCCTTCGCGCTCACCTACAAGCGCAACCC
GACATGATTTTCACCCTCCTCTCCACCCTCTTCACGCAACTCCTTTTTGG
CTCAGTCAACCACTGGGCCATCACCCGTCCTATCCTCTCTCTCATGCTTG
CGTCCGAGGAAGATTTTAATGCTTACAAGGAACACATGATTAGCACACAG
CCCTCCCCTGAGAATCAAGTGAGACTTCGGGAAGAATTCATGAGGTTGTG
TGCGGATCTTCAACGGAATCTGGAGCCCAGCAATAGGGAGAGGATGGGCC
AAAAGCTAACCGTCTTCCGGGTAGCTGTTTCCCAGTTTTTGACGAGCTGA
AGGGCGGGGGAAGGGAAGGAGGGAACTAAGGGAGGAGTTGGAAGGGTGGA
GCTTGAGCTGCACAGATTTCGACGGGTAAGGGAGAAATAAAGGAAGGAAA
GGAGGGAGGAAGGGAGGAAGGGGAGATGAAACGGGCATCTGAAAGGGAGA
GCGTCGCGAACATGTGACGGAGACGAGGAGTGCAAAGAAGGGGGGGTGGG
ACTGGGTAGGAAATAGAAGACGTAGGAGAAGATAGGAAGTATAAGTGATA
TAGAACGAGAGAAAAAGACAGGGCAGGAAGACATAAACAGAAATAAAGGA
AGGAAAATAGAGAGCGATAGGAAAGCTGAACAGTCATAACGATGCCCGCA
back to topCoding sequence (CDS) from alignment at chr16:309696..315795- >NO16G00960.1 ID=NO16G00960.1|Name=NO16G00960.1|organism=Nannochloropsis oceanica|type=CDS|length=3384bp|location=Sequence derived from alignment at chr16:309696..315795- (Nannochloropsis oceanica)
ATGGACGCCCAAGCCTTGCAACAGCTCGAAGGGCTGTGTGAAACCCTGTA
TAACAGCAGTAACGAGACGGAGCGCCAGCAGGCCCAAGAGCAACTTCTTT
CCTTGCAGTCCTCTGCGGAATATATTCCCCGATGCCAGTACATTCTTGAC
AACTCCCACTCCTCCTACGCCTTATTCGTGGCAGCCAATGCCCTTACCAA
GCTCATCACACAGTTCTGGAACAACTTTACAGTCACCGAGCGCGTCGATG
TACGGAACTACGTCCTTTCCTACCTAGCAAGTCAAGGTCCGCAGCTGCCT
GATTTTGTCGCTACCAGCCTCATTCAACTTGTCTGCCGCATCACCAAACT
CGGCTGGTTCGATGACGCCCAGCACAGGGAGCTCGTGGAGGAGGTTGATA
AATTTTTGCATGCCAACGTGGAGTACTGCATTGTCGGGCTTCGGATTCTT
AATCAGTTGGTAGAGGAATTGAATCTTCCCACCTCTGGTCGCACCCTCAC
CCTCCACCGCAAGACGGCAGTCTCCTTCCGGGACCTCTGCTTGTTCCGCA
TATTTCAGATAAGCCTCTCTACGCTGCAGCAGGTGAAATGTCGACAATTT
ACCAATGCAGCCCCCCAGCAAGAGGTGAAAATCGCAGAGCATGCCCTCAA
CCTCGCCACGCGCTGCCTCTCCTTCGATTTCATAGGGACAAACCCGGACG
AGTCCGCCGAAGATGTGGGCACAATCCAAGCCCCCAACACTTGGCGAAGT
GTCGTTCAAGACCCCGCCACCATGACCCTCTTACTCGACTTCTACAAAAA
CACCCAACCCCCGTCCTCCTCCCAAGCCCTCCAATCGGTCATCCTCCTTT
CCTCCGTCCGCCGCTCCCTCTTTTCCACGGACAAGGAACGCGCAGCTTTC
CTGCAGCAGCTGGTCACGGCGATCCGGGACATACTACAGACGGAGCAAGG
GCTGAATTATCAAGAGAATTATCACGAGTTTTGTCGATTGCTTGGGCGGT
TGAAAGCCAACTACCAGCTATGCGAGCTAGTGAGGACGGAAGGCTTCACT
GAATGGTGCGATTTGGCCGCGGCGTTTACAGTGCGGAGTTTCCAGCAGTG
GCAGTGGTTCAGTAATTCTATTCATTATCTGCTCGGATTGTGGGGGAGGT
TAATTGCCGCTATACCCTATGTGCCACACGTGCCACAGCAGCCTTCCTCT
ACCTCTTCCTCGAGTAGCAGAAATGGCGGGAGCAGTAGCAGTGGCGTGAA
CTATAGAGAAAAAATGCAGAGGTGTGTGTTGCAGGTGGTGCAGTCGTATA
TTAAATGTATGATTGAATCAGTCGAGGTAGTCGCGCATTCGGACGGTAGC
TTGGACGATCCCCTCGACGACGAAGGCTCGCTCAAAGAGCAATTGGAACG
GCTTCCCGTTATATGCCTCTTCCAGTACTCCTCTGTTGCATCGTATCTTA
TGTCATTCCTTGATCCTATCATGAATGCGTATCAAGAAAAAATCCTCAAG
GACCCTTCATCACACCGGACGGCGCAGCAAAGCCCGGAGGCGGCAAGAGA
AATGATCGTGTTGGACGGGCAATTAACCTGGTTGGTTTATATGGTGGGCG
CCATCATAGGAGGACATACCAGTGAAATCCACAGCGCGAGTTCTTCGGGC
GATGGAGGGGCCACGAGCCAGGAGGCAATCGATGCAAATTTGGCGTCGAG
ATGCTTGATGCTCGCTCAGGGGTTGAATGTGCGGGCGCAGCAGACAGGGG
GGGCGGGACCATGCAGCCCGAGGTTGGAATTAGCATTGGTTTATTTCTTC
CAGGCATTTCGTAAAATGTATGCGTGTGAGATGCCGCAAACGTTGTCCAT
GTCCTCGGTGTCGATGGCGGCGGCAGCCGTGAGAATGGATGGGGGAGGGG
CGATGATGAAGGCGAAGGGTTACCAGACCGTCTACGACTTGATTGGACTG
GGGGATCAGGTGGCTGTGACCAACATAATTGTGATTAAGGTGGGCAACAA
CCTCAAGCACTGGGGCAAGAACGAGGAGGTCATAGCCCGTACCCTCCACC
TCTTCCTCGAAATGACCATGGGCATCGGGACTGCCAAGGTCCTCCTCTCA
CTTGACACGGTCCAATACCTTCTCCAACACCACACCCCCGAGCACTTCCC
CTTCTTAGCCGTTCCTGCAAATAGCCGGCATCGCACGTCATTCCATGCTA
CTCTGGCGAGGCTCATCCTCTCCGTTGTCGACGAGAGGACGGCCGCGGCG
TTTGAGGCGTTCATGGAACCGATCCTCCAGGTACTAAGCCAGCTACAGAG
CACCCCGGACATTCGGACAGAAGATGCCAAGCAAGCCATCATTGGCGCCT
GTCGAGATCTGCGAGGCATCACGGCCGCCACCCAGAACCGAAAAGCCTAT
TGTGCATTGTTCGAATTGCTCTACCCCCAGCATTTCCCGGTGTTTGTCCG
CGCGGCCGAGGTCTGGTTTGACGCACCTGAAGTGACCACGGCCCTGCTTA
AATTCATGCAAGAATTTGTGTACAACAAGGCGCAAAGGCTCATGTTTGAT
CAGAGCTCTCCAAATGGGATTTTGTTATTCAGAGAGGCGAGTCGTGTGTT
GGTCGCGTATGGCTCTCGGGTGTTACAGCATCCGTTCAGGTCGGACGTGT
ACAAGGAGAAATACAAGGGTATTGCGATATCGCTTAATGTCCTTACATGT
GCCCTATCGGGGAACTACGTGAATTTTGGCGTCTTTGCCCTGTACGAAGA
CCCGGCCTTGGACGATGCCCTTAAAATTGCCCTCCAAATGGCCCTCTCCA
TCCCCTTCCAAGAAATTCTTGCCTTCCCCAAGCTTAGTAAAGCCTACTTT
GCCTTCTTTGAGGTCCTCTTCCGAAACCACATCCCGGCCGCGCTTTCCCT
CCCTACTCCCGTCTTTCTTCACGTCATCCAGGCCCAGCACGAAGGGTTGC
AGTCGGTCGACACCCTCCTCTCTGCCCAATGCGCCTCCACTATCGACTAT
CTCGCCACCTACTTCTTCCAGAACAAGGCCAAGCCAGACCGTCCCCCCAT
CCGTGCCCTTCGCGCTCACCTACAAGCGCAACCCGACATGATTTTCACCC
TCCTCTCCACCCTCTTCACGCAACTCCTTTTTGGCTCAGTCAACCACTGG
GCCATCACCCGTCCTATCCTCTCTCTCATGCTTGCGTCCGAGGAAGATTT
TAATGCTTACAAGGAACACATGATTAGCACACAGCCCTCCCCTGAGAATC
AAGTGAGACTTCGGGAAGAATTCATGAGGTTGTGTGCGGATCTTCAACGG
AATCTGGAGCCCAGCAATAGGGAGAGGATGGGCCAAAAGCTAACCGTCTT
CCGGGTAGCTGTTTCCCAGTTTTTGACGAGCTGA back to top
|