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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr16 | genome | chr16:152022..154308 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G00410.1 vs.
Match: XP_005856055.1 (peroxin-14, partial [Nannochloropsis gaditana CCMP526]; EKU20302.1 peroxin-14, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 203.8 bits (517), Expect = 1.900e-48 Identity = 148/303 (48.84%), Postives = 196/303 (64.69%), Query Frame = 0
Query: 1 MDNNDPPSPSPT-PGST---REDFILNGVSFLQHPKVQQAPLSQRITFLEKKGLTQGEIAEALTRVKGAQAGSEPDQPYGSRNSGNSNSSNLT----SPPPPPPYAMMEASP-PPPPIGMWGQGSGFMLPGAVVAGLALGAGVTHLYRMRDHHRMMQQQQQQQRQRE-EEEEEIRRRQQQEQLDGIGQAEEGMRVRFEDAGGIYDQQQQQQQQQQQQEAHPFSSTTQDATPVSSSSFHELAKAIESQAEALSALAQASEKSRLDFHSLLTGHVASHTADIRAELSSIKQMLLLTAGGGLMANA 294
MD++ P+ S P T REDFI NGVSFL+HP VQQAPLSQRITFLEKKGLTQ EI EA TR K G E P+ S ++ +N+S SPPPP PYA E P PP P+GMW QG G+ +PGAVVAGLA+GAG+THLYR R H +MQQ Q++QR++E + + + RQ QE L+ D GG D + + Q+ + A + + A SS +A+AI++QA+AL+ALA+ASE++R DFHSLL+GH+AS + ++R+EL+++KQMLLL+AG A A
Sbjct: 1 MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKN---GLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYRYRHHQELMQQAQEEQRRQEADADADAAARQAQESLE-------------RDEGGGGDVRAVRFQESEYLVARGDAHSLPPA-----SSLQAIAEAIQAQAQALTALAEASERNRQDFHSLLSGHLASQSTELRSELTTLKQMLLLSAGAPAAAAA 282
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G00410.1 ID=NO16G00410.1|Name=NO16G00410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2287bp
ATGGACAACAATGACCCTCCTTCTCCTTCCCCCACTCCGGGAAGCACCCG
CGAGGACTTCATCTTGAATGGGGTCTCCTTTCTGCAGCACCCTAAGGTCC
AACAAGCCCCGCTTTCTCAACGCATCACCTTCCTGGAGAAGAAAGGGTTG
ACACAAGGGGAGATTGCCGAGGCCTTAACCCGCGTCAAAGGGGCACAAGC
AGGCAGCGAACCCGATCAGCCCTACGGCAGTAGAAACAGCGGCAACAGTA
ACAGCAGCAACCTCACTTCTCCCCCCCCGCCGCCACCCTACGCCATGATG
GAAGCGTCACCACCGCCACCACCGATAGGCATGTGGGGACAAGGGTCGGG
GTTCATGCTTCCAGGGGCAGTGGTGGCAGGCTTGGCGTTGGGGGCAGGAG
TTACGCATTTGTACCGTATGCGGGATCACCATAGAATGATGCAGCAGCAG
CAACAACAGCAGCGGCAAAGGGAAGAAGAGGAGGAAGAGATTCGTCGACG
GCAACAACAGGAACAGCTTGATGGAATTGGACAGGCAGAGGAAGGAATGC
GTGTACGCTTCGAAGACGCTGGGGGCATTTACGACCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGGAGGCTCACCCTTTTTCCTCAACAACTCA
AGACGCCACCCCTGTTTCTTCCTCCTCCTTCCACGAGCTCGCCAAGGCCA
TTGAATCCCAAGCAGAAGCCCTGTCCGCCTTGGCACAAGCCTCGGAAAAG
AGCCGGTTGGACTTCCACTCCCTGCTTACGGGGCATGTTGCCTCCCACAC
CGCAGACATTCGTGCCGAGCTTTCCTCCATCAAGCAGATGCTGCTCCTCA
CAGCTGGAGGAGGGTTGATGGCCAATGCGTCCTCTTCGTCCTCGTCCTCG
TCGGCGGCAGTGGCTCGCATCGCGCTCGAAGGGCCAAAGGTGCCGCAGCT
CATGATCCAAGAGCAGCAGCAGCAGCAGCTGAGGGAGGAGGAATGGAAGG
AAAGGGAGTGCAGCTTGTCGTCTCCCTCACCGGTGCCATCCAATGTGGAG
GAAGAGGAAGGGAGGGAGCGACAGGAAGGCGGGGATACGGGAGGGGAGGG
AGGCGCTTCTTCTAACACCACAGGGGATGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCCACCGCCGCCCAACAACTGCAACAAGAGCAAGAAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCTGCTGCCACTGGACAACGACGATTGCA
CCGGCATCGCGTCAAGCAGCTGACCCGCTCCCTCAAATCCCTCCTCGCCC
TCAACCAGGCCCTCCCCCCCTCCCTCCTCCAGGATGCAGTCGAGATGCTG
CTAGTGTACGCCAACAACTTGATCAAATACCCCACCGTGCCTCGGTTTCG
GAAGATTGCGTTGGTTAACCAAGGATATCGAGAAAGGGTGAGTGGGGTCA
GGGGCCACGAAGACTTTTTGAAAGCTCTCGGGTACGTGGAGGGAACGACG
TGCTTTGAGTGGGAGGGAGGGAGGGAGGGGGGGAAGGAGGGGGGGCTGGA
GATGTTGAAGGTGGCGGTTGGGATGTTAACGAGTGTGAAAAATGGGGACG
AGCCCATCGCATGGCCCGCGCTACCGCCCTTGGAGGAGGGGGAGGAGGAA
GAGGAGGAGCCGGCGGAGAGAGGGAAGGAAGAAGGGAATGAGGATGAAGA
GGAGAAGGAGAACGCGGAGAAGGAGAGAATGATTCGAGCGTTGCTGCGAA
AGAGGGAGGAGGCGCGGGTGGCGAGAGAACGAGGAGGAGAGGAGGAAAAG
GAAGGGAGGAAGGAATCCAAAGAAGAGACGGCTCCTTCCTCTTCCTCGTC
TTCCGCCCCCATCTCTCCGTCTTCGCAAAAGGCATACGAGAGGGAGGAGG
GAAATGTAGATTCTCCACCTTCTTCTACTTCTCTTCCACCACCACAGTAC
CCACAGTCATTTCGTGAGATCATGGAGATGACAGAGAGGGGGGAAACGCC
CGCGGGGATCGCACAGGTGGAAAGTCGGCTGTCGCAGGACGTGGAGCGGG
AAGGAGGGCCCAAGCCCCTTTCCTCCTTGTCGAGTGTATCAGTCCCCAAG
AAGAAGCCGTGGGAGGTGGCGGCGGTGGAGGAAGAGGAGGAGCGGGGGGG
AAGGAAAGAGTGGGAGAGGTGATAAAGAAAGAGGCGGGAGAAAGAGGGAA
GAGAGAAGGGGATGTTAAAAAGGAACTCGTGGCGAAGTAGGCAAAGAGGG
TGAATTACAAAGTAAACAAGGAAATGGGAACGATTAT back to topprotein sequence of NO16G00410.1 >NO16G00410.1-protein ID=NO16G00410.1-protein|Name=NO16G00410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=724bp
MDNNDPPSPSPTPGSTREDFILNGVSFLQHPKVQQAPLSQRITFLEKKGL
TQGEIAEALTRVKGAQAGSEPDQPYGSRNSGNSNSSNLTSPPPPPPYAMM
EASPPPPPIGMWGQGSGFMLPGAVVAGLALGAGVTHLYRMRDHHRMMQQQ
QQQQRQREEEEEEIRRRQQQEQLDGIGQAEEGMRVRFEDAGGIYDQQQQQ
QQQQQQQEAHPFSSTTQDATPVSSSSFHELAKAIESQAEALSALAQASEK
SRLDFHSLLTGHVASHTADIRAELSSIKQMLLLTAGGGLMANASSSSSSS
SAAVARIALEGPKVPQLMIQEQQQQQLREEEWKERECSLSSPSPVPSNVE
EEEGRERQEGGDTGGEGGASSNTTGDAAAAAAAAAAATAAQQLQQEQEAA
AAAAAAAAAATGQRRLHRHRVKQLTRSLKSLLALNQALPPSLLQDAVEML
LVYANNLIKYPTVPRFRKIALVNQGYRERVSGVRGHEDFLKALGYVEGTT
CFEWEGGREGGKEGGLEMLKVAVGMLTSVKNGDEPIAWPALPPLEEGEEE
EEEPAERGKEEGNEDEEEKENAEKERMIRALLRKREEARVARERGGEEEK
EGRKESKEETAPSSSSSSAPISPSSQKAYEREEGNVDSPPSSTSLPPPQY
PQSFREIMEMTERGETPAGIAQVESRLSQDVEREGGPKPLSSLSSVSVPK
KKPWEVAAVEEEEERGGRKEWER* back to topmRNA from alignment at chr16:152022..154308+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G00410.1 ID=NO16G00410.1|Name=NO16G00410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2287bp|location=Sequence derived from alignment at chr16:152022..154308+ (Nannochloropsis oceanica)
ATGGACAACAATGACCCTCCTTCTCCTTCCCCCACTCCGGGAAGCACCCG
CGAGGACTTCATCTTGAATGGGGTCTCCTTTCTGCAGCACCCTAAGGTCC
AACAAGCCCCGCTTTCTCAACGCATCACCTTCCTGGAGAAGAAAGGGTTG
ACACAAGGGGAGATTGCCGAGGCCTTAACCCGCGTCAAAGGGGCACAAGC
AGGCAGCGAACCCGATCAGCCCTACGGCAGTAGAAACAGCGGCAACAGTA
ACAGCAGCAACCTCACTTCTCCCCCCCCGCCGCCACCCTACGCCATGATG
GAAGCGTCACCACCGCCACCACCGATAGGCATGTGGGGACAAGGGTCGGG
GTTCATGCTTCCAGGGGCAGTGGTGGCAGGCTTGGCGTTGGGGGCAGGAG
TTACGCATTTGTACCGTATGCGGGATCACCATAGAATGATGCAGCAGCAG
CAACAACAGCAGCGGCAAAGGGAAGAAGAGGAGGAAGAGATTCGTCGACG
GCAACAACAGGAACAGCTTGATGGAATTGGACAGGCAGAGGAAGGAATGC
GTGTACGCTTCGAAGACGCTGGGGGCATTTACGACCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGGAGGCTCACCCTTTTTCCTCAACAACTCA
AGACGCCACCCCTGTTTCTTCCTCCTCCTTCCACGAGCTCGCCAAGGCCA
TTGAATCCCAAGCAGAAGCCCTGTCCGCCTTGGCACAAGCCTCGGAAAAG
AGCCGGTTGGACTTCCACTCCCTGCTTACGGGGCATGTTGCCTCCCACAC
CGCAGACATTCGTGCCGAGCTTTCCTCCATCAAGCAGATGCTGCTCCTCA
CAGCTGGAGGAGGGTTGATGGCCAATGCGTCCTCTTCGTCCTCGTCCTCG
TCGGCGGCAGTGGCTCGCATCGCGCTCGAAGGGCCAAAGGTGCCGCAGCT
CATGATCCAAGAGCAGCAGCAGCAGCAGCTGAGGGAGGAGGAATGGAAGG
AAAGGGAGTGCAGCTTGTCGTCTCCCTCACCGGTGCCATCCAATGTGGAG
GAAGAGGAAGGGAGGGAGCGACAGGAAGGCGGGGATACGGGAGGGGAGGG
AGGCGCTTCTTCTAACACCACAGGGGATGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCCACCGCCGCCCAACAACTGCAACAAGAGCAAGAAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCTGCTGCCACTGGACAACGACGATTGCA
CCGGCATCGCGTCAAGCAGCTGACCCGCTCCCTCAAATCCCTCCTCGCCC
TCAACCAGGCCCTCCCCCCCTCCCTCCTCCAGGATGCAGTCGAGATGCTG
CTAGTGTACGCCAACAACTTGATCAAATACCCCACCGTGCCTCGGTTTCG
GAAGATTGCGTTGGTTAACCAAGGATATCGAGAAAGGGTGAGTGGGGTCA
GGGGCCACGAAGACTTTTTGAAAGCTCTCGGGTACGTGGAGGGAACGACG
TGCTTTGAGTGGGAGGGAGGGAGGGAGGGGGGGAAGGAGGGGGGGCTGGA
GATGTTGAAGGTGGCGGTTGGGATGTTAACGAGTGTGAAAAATGGGGACG
AGCCCATCGCATGGCCCGCGCTACCGCCCTTGGAGGAGGGGGAGGAGGAA
GAGGAGGAGCCGGCGGAGAGAGGGAAGGAAGAAGGGAATGAGGATGAAGA
GGAGAAGGAGAACGCGGAGAAGGAGAGAATGATTCGAGCGTTGCTGCGAA
AGAGGGAGGAGGCGCGGGTGGCGAGAGAACGAGGAGGAGAGGAGGAAAAG
GAAGGGAGGAAGGAATCCAAAGAAGAGACGGCTCCTTCCTCTTCCTCGTC
TTCCGCCCCCATCTCTCCGTCTTCGCAAAAGGCATACGAGAGGGAGGAGG
GAAATGTAGATTCTCCACCTTCTTCTACTTCTCTTCCACCACCACAGTAC
CCACAGTCATTTCGTGAGATCATGGAGATGACAGAGAGGGGGGAAACGCC
CGCGGGGATCGCACAGGTGGAAAGTCGGCTGTCGCAGGACGTGGAGCGGG
AAGGAGGGCCCAAGCCCCTTTCCTCCTTGTCGAGTGTATCAGTCCCCAAG
AAGAAGCCGTGGGAGGTGGCGGCGGTGGAGGAAGAGGAGGAGCGGGGGGG
AAGGAAAGAGTGGGAGAGGTGATAAAGAAAGAGGCGGGAGAAAGAGGGAA
GAGAGAAGGGGATGTTAAAAAGGAACTCGTGGCGAAGTAGGCAAAGAGGG
TGAATTACAAAGTAAACAAGGAAATGGGAACGATTAT back to topCoding sequence (CDS) from alignment at chr16:152022..154308+ >NO16G00410.1 ID=NO16G00410.1|Name=NO16G00410.1|organism=Nannochloropsis oceanica|type=CDS|length=2172bp|location=Sequence derived from alignment at chr16:152022..154308+ (Nannochloropsis oceanica)
ATGGACAACAATGACCCTCCTTCTCCTTCCCCCACTCCGGGAAGCACCCG
CGAGGACTTCATCTTGAATGGGGTCTCCTTTCTGCAGCACCCTAAGGTCC
AACAAGCCCCGCTTTCTCAACGCATCACCTTCCTGGAGAAGAAAGGGTTG
ACACAAGGGGAGATTGCCGAGGCCTTAACCCGCGTCAAAGGGGCACAAGC
AGGCAGCGAACCCGATCAGCCCTACGGCAGTAGAAACAGCGGCAACAGTA
ACAGCAGCAACCTCACTTCTCCCCCCCCGCCGCCACCCTACGCCATGATG
GAAGCGTCACCACCGCCACCACCGATAGGCATGTGGGGACAAGGGTCGGG
GTTCATGCTTCCAGGGGCAGTGGTGGCAGGCTTGGCGTTGGGGGCAGGAG
TTACGCATTTGTACCGTATGCGGGATCACCATAGAATGATGCAGCAGCAG
CAACAACAGCAGCGGCAAAGGGAAGAAGAGGAGGAAGAGATTCGTCGACG
GCAACAACAGGAACAGCTTGATGGAATTGGACAGGCAGAGGAAGGAATGC
GTGTACGCTTCGAAGACGCTGGGGGCATTTACGACCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGGAGGCTCACCCTTTTTCCTCAACAACTCA
AGACGCCACCCCTGTTTCTTCCTCCTCCTTCCACGAGCTCGCCAAGGCCA
TTGAATCCCAAGCAGAAGCCCTGTCCGCCTTGGCACAAGCCTCGGAAAAG
AGCCGGTTGGACTTCCACTCCCTGCTTACGGGGCATGTTGCCTCCCACAC
CGCAGACATTCGTGCCGAGCTTTCCTCCATCAAGCAGATGCTGCTCCTCA
CAGCTGGAGGAGGGTTGATGGCCAATGCGTCCTCTTCGTCCTCGTCCTCG
TCGGCGGCAGTGGCTCGCATCGCGCTCGAAGGGCCAAAGGTGCCGCAGCT
CATGATCCAAGAGCAGCAGCAGCAGCAGCTGAGGGAGGAGGAATGGAAGG
AAAGGGAGTGCAGCTTGTCGTCTCCCTCACCGGTGCCATCCAATGTGGAG
GAAGAGGAAGGGAGGGAGCGACAGGAAGGCGGGGATACGGGAGGGGAGGG
AGGCGCTTCTTCTAACACCACAGGGGATGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCCACCGCCGCCCAACAACTGCAACAAGAGCAAGAAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCTGCTGCCACTGGACAACGACGATTGCA
CCGGCATCGCGTCAAGCAGCTGACCCGCTCCCTCAAATCCCTCCTCGCCC
TCAACCAGGCCCTCCCCCCCTCCCTCCTCCAGGATGCAGTCGAGATGCTG
CTAGTGTACGCCAACAACTTGATCAAATACCCCACCGTGCCTCGGTTTCG
GAAGATTGCGTTGGTTAACCAAGGATATCGAGAAAGGGTGAGTGGGGTCA
GGGGCCACGAAGACTTTTTGAAAGCTCTCGGGTACGTGGAGGGAACGACG
TGCTTTGAGTGGGAGGGAGGGAGGGAGGGGGGGAAGGAGGGGGGGCTGGA
GATGTTGAAGGTGGCGGTTGGGATGTTAACGAGTGTGAAAAATGGGGACG
AGCCCATCGCATGGCCCGCGCTACCGCCCTTGGAGGAGGGGGAGGAGGAA
GAGGAGGAGCCGGCGGAGAGAGGGAAGGAAGAAGGGAATGAGGATGAAGA
GGAGAAGGAGAACGCGGAGAAGGAGAGAATGATTCGAGCGTTGCTGCGAA
AGAGGGAGGAGGCGCGGGTGGCGAGAGAACGAGGAGGAGAGGAGGAAAAG
GAAGGGAGGAAGGAATCCAAAGAAGAGACGGCTCCTTCCTCTTCCTCGTC
TTCCGCCCCCATCTCTCCGTCTTCGCAAAAGGCATACGAGAGGGAGGAGG
GAAATGTAGATTCTCCACCTTCTTCTACTTCTCTTCCACCACCACAGTAC
CCACAGTCATTTCGTGAGATCATGGAGATGACAGAGAGGGGGGAAACGCC
CGCGGGGATCGCACAGGTGGAAAGTCGGCTGTCGCAGGACGTGGAGCGGG
AAGGAGGGCCCAAGCCCCTTTCCTCCTTGTCGAGTGTATCAGTCCCCAAG
AAGAAGCCGTGGGAGGTGGCGGCGGTGGAGGAAGAGGAGGAGCGGGGGGG
AAGGAAAGAGTGGGAGAGGTGA back to top
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