NO16G00270.1, NO16G00270.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G00270.1
Unique Name	NO16G00270.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2964
Alignment location	chr16:97005..102662 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:97005..102662 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G00270.1 vs.
Match: SJX63131.1 (related to COT1-Vacuolar zinc (and possibly other metals) transporter [Sporisorium reilianum f. sp. reilianum])

HSP 1 Score: 144.8 bits (364), Expect = 1.400e-30
Identity = 149/514 (28.99%), Postives = 236/514 (45.91%), Query Frame = 0

Query:  336 MMLLTSVYLVAELAISVVTGSLALRADSFHMLSDVMALGTAWWAQVLAKKGPNDKATFGWGRAEVIGALVNCAFVLGIAVEIILSAAEQVLDWSKFGSARMEDQRMTSSFMIYMGITGLALNSLGMVIFGGHHHHVGGNCPHS-GHGGHGHHHHGHSHGHG------HDCGSAHPTTPSAHAGPSYTHADGDSCSGHGHKHEGKHG-----------------HHHHHHHHHHHHSPHTPVAEGPLASPRLTTALLSPSG---GDVADSK-GVELPSSRFNDIEEGGEGEEEEEDGLESQSQTPSQTPTHRHSHGENGGKTKKHVNLNMKATFLHLLGDALGSFSIIISGLIIRYGEPVLGSYGMLADPICGLIIVAIILFTTVPVLRQSCRILLNFTPKGLNLASLRQELLALPHVLDVHALHVWTPSSGAELQASMHVIMSSRGAKHEADEHLEDNTSLPFEKDETKQAPVPKGLTTTKRIRALLRAAGITIMTVQTEIIPESIAALPLPDG 822
            ++++  V+   E+      GSLAL ADSFHML+DVM+L  A WA  L+ +  + + ++GW RAE++GALVN  F+L +   I + A E+ ++ ++  + ++         ++ +G  GLA N +G+++F  H H  GG   HS GH  H H  H HSH H       H  G+AH    SA    +   A  D  +  G   +   G                 H   +    H HS      +      RL T   +  G   G  AD + G   P++R N    G +     +    S        P H HSHG  GG +  H ++NM+  FLH+LGDALG+  +I +GL I Y +     Y   +DP    +I  II  + +P+ + +  ILL   P  ++L ++R  ++++  VL++H LHVW  S  +++ AS+HV++     + E                        K +T   +IR+ L + GI   T+Q E +P  +    +  G
Sbjct:   12 LLVIDVVFFFVEIITGYAVGSLALVADSFHMLNDVMSLVVALWAVKLSTRSSDHRFSYGWQRAEILGALVNGVFLLALCFSIFMEAIERFVNVTEVSNPKL---------VVVVGCLGLASNLVGLLLFHDHGHAHGGGHGHSHGHASHSHGAHDHSHSHAVTDASSHAHGNAHQVVSSADDAAAAAVAASDDNAKRGRGRQDSVGSILGHPAQTRAFVVQTAHDLGYDGSRHQHSNSITSLKSNTERSRLLTNGSTDYGATDGARADLEAGTSSPAARKNGHAHGHDSHAGHD---HSHGADAHDAPGHGHSHG--GGHSHSHGSMNMQGVFLHVLGDALGNVGVIAAGLFIMYSDAWWRFY---SDPAISFLITIIIFHSALPLCKSASYILLQGVPASVSLEAVRNSIMSVDGVLNLHELHVWQLSE-SKIVASVHVLVDCSSGQTE------------------------KYMTIAAKIRSNLHSWGIHSSTIQPEFVPGGLREAAILSG 483

The following BLAST results are available for this feature:

BLAST of NO16G00270.1 vs.

BLAST of NO16G00270.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
SJX63131.1	1.400e-30	28.99	related to COT1-Vacuolar zinc (and possibly other ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G00270	NO16G00270	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G00270.1	NO16G00270.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G00270.1.cds1	NO16G00270.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds2	NO16G00270.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds3	NO16G00270.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds4	NO16G00270.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds5	NO16G00270.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds6	NO16G00270.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds7	NO16G00270.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds8	NO16G00270.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds9	NO16G00270.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds10	NO16G00270.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds11	NO16G00270.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds12	NO16G00270.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds13	NO16G00270.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00270.1.cds14	NO16G00270.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:97005..102662+
coding sequence from alignment at chr16:97005..102662+

mRNA sequence

>NO16G00270.1 ID=NO16G00270.1|Name=NO16G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=2964bp
ATGCCGGAGCCTTGCTTCATTTCCTCACCAGACAAAGAAGAGATCCAAAA
CTCGCGTGCGGAGGATTTAAAGCCTTCATGTAGCTGCCTACACTCAGGGC
CTGCCTGTACTGCTCGTAGGCCTCGCGTGTGCGTCAGAATCGTCGGAAAA
GCAGCAGAGCCCGAAAAAAGAACACGATCATCGTACTTGCCAGAAGCACT
AGCACCGGCAGCAACATCCAGCAGCACCCAGCAGCACCGCGCCCGCAGCA
GCAACATGCCTGAAACGGGCGGTACCGGCAGCAGCGAGGATGTCGGGGCA
CCAAATTGTTCATCCCCCTCGAAGCGACCTCCCCCCCTCTCCAACAACCC
ACGCCCCAAGAGCGGGGTGGGCCTGGAGCCCTTGACCCCTTCTGCCTTTG
CTGCCCTCACAACCCTCCCAATATTCATGCATCCTCAACAATCTTACTAC
CTGACGCCGGCCCCGGCCAGGAAGCAAAAAAGGAAGAAGGACAAGGGTTC
GAAGGAGGCGGGGAAGAGCAAGAGCAGCAGCAGCATCAGCAGCAGCAGCA
GCAAGAAGGAGGGAGGTGGGTGTAGCCACGATCACGGGCGTGGAGGGCAC
GAACACCATCATCACGACCATCATCACTCTCATCATCATCGTACCCACGA
GTCCGCTGCCACGGCCAACTCGACGGAGGCCGAGGACAAGGAAACAGGGA
GACAGAGCGTATCGATCACCCCCAACGCCTGCTCCGGCCAGGGTAGCCAC
GCGCACGCAGACGACCTCTGCAAGGCCGAAGTCCATAAACACGGGCATCA
TTACCACCAGCACAAGCAGCAACAGGAGCAGCAGCAGCACTACGTACTGG
CGGATCCCCTTCCACCTAAGGCCCCAACGCAGACTCTTTCCCCGCACCAC
CACAAGGCCATCATAGACGCGGCGATGGTGGGGGGGAAGCCCATGACGAA
GTGGGAGGCGTTTAGGAACAAGTGGTTGAGTGGGCCGAGCCGGCCATTCG
CCATCATGATGCTGCTCACGAGCGTGTATCTGGTGGCCGAGCTGGCCATC
TCAGTAGTGACGGGATCCCTGGCCCTGCGTGCCGACTCGTTCCACATGCT
CTCGGATGTGATGGCTTTGGGCACGGCGTGGTGGGCGCAAGTCCTGGCAA
AAAAAGGGCCTAATGACAAGGCGACGTTCGGCTGGGGTCGTGCGGAAGTC
ATCGGTGCCCTGGTGAATTGCGCCTTCGTTCTCGGTATTGCCGTGGAGAT
TATCCTGTCGGCGGCCGAGCAGGTGCTGGACTGGTCAAAGTTCGGCAGCG
CCCGCATGGAGGACCAGCGCATGACGAGCTCCTTCATGATCTATATGGGT
ATCACCGGCCTGGCCCTCAACTCCCTCGGTATGGTCATCTTCGGCGGGCA
TCATCACCACGTGGGAGGGAATTGTCCTCATTCCGGCCATGGGGGCCACG
GCCATCACCATCACGGTCATAGCCACGGGCACGGGCATGACTGTGGCAGC
GCGCATCCCACCACCCCCTCAGCGCACGCGGGTCCCTCTTACACACACGC
GGATGGCGACAGCTGTTCAGGCCATGGACATAAGCATGAAGGAAAGCATG
GACACCACCATCACCACCACCACCACCATCATCATCATAGTCCTCACACG
CCCGTGGCTGAAGGCCCACTGGCCTCGCCCAGGCTGACGACAGCGTTGCT
GTCCCCCTCGGGCGGCGACGTGGCCGACAGCAAGGGCGTGGAGCTACCCT
CCTCCCGCTTCAATGACATCGAGGAAGGGGGGGAGGGCGAGGAGGAGGAG
GAGGACGGGCTGGAGAGCCAGAGCCAGACGCCATCCCAAACACCGACCCA
CCGCCACAGCCACGGGGAGAACGGGGGGAAGACGAAGAAGCACGTCAACT
TGAACATGAAAGCCACCTTCCTCCACCTCCTCGGAGACGCACTGGGGTCG
TTTAGCATCATTATCTCCGGTCTCATCATCCGCTACGGCGAACCCGTGCT
AGGCAGTTACGGCATGCTAGCGGATCCGATCTGCGGCCTGATCATCGTGG
CCATCATCCTTTTCACTACCGTGCCGGTCTTGCGCCAGAGCTGCCGCATC
CTGCTGAACTTCACGCCCAAAGGCCTTAACCTCGCCTCCCTCCGGCAAGA
GCTCCTCGCCCTCCCTCACGTCCTTGACGTCCACGCCCTGCATGTCTGGA
CTCCCTCTTCCGGCGCCGAGCTGCAAGCGTCCATGCACGTGATCATGTCC
AGCCGCGGGGCCAAGCACGAGGCGGACGAACATCTGGAGGACAACACCAG
CCTGCCCTTCGAGAAAGACGAGACGAAGCAAGCCCCCGTGCCCAAGGGCC
TGACCACGACCAAGAGGATCCGAGCTTTGTTACGCGCGGCGGGCATCACA
ATCATGACCGTGCAGACTGAAATCATCCCTGAGTCCATCGCTGCTTTGCC
GCTGCCGGACGGATACCGCTACCGGTGCTTGCACGAGGACGAGTCTCAAG
CCCAATATCATCACCAAGAGACCCCTTCCGCCTCTGCCGCCGCTGCCGCC
GCCGCCGCCGGTGCTGCGTTCAACGCCTCCTCCTCCTCCTCCTCCACCTC
CTCCACCGCCACCTCCATTACGGGCGGCGCGGGTGTGAGTGCGTCGGATC
CCGCCCTCAGTCCCGCCCTCCCCCTCTCTTCCCACTGCGTGGAAGACGAT
TATGTCACATGCACCATCACTGCGGCTACTCCTCACGTGGGGAGGGGAGG
AAGGAGGGCGCACTTCGCGGCTTCTCCATCTCCCACGCACGCTCGTGGTG
GAGACGAGGAAGAGGGGAGCAGTAGAACAGCCAGCGGCGGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCTGCAATGAAGA
AAGAGGCCATTTAGCAGCTGGGGCATCGGTAGCAGTAGTTACGAAGGGCA
AAATGGAAACATGA

protein sequence of NO16G00270.1

>NO16G00270.1-protein ID=NO16G00270.1-protein|Name=NO16G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=988bp
MPEPCFISSPDKEEIQNSRAEDLKPSCSCLHSGPACTARRPRVCVRIVGK
AAEPEKRTRSSYLPEALAPAATSSSTQQHRARSSNMPETGGTGSSEDVGA
PNCSSPSKRPPPLSNNPRPKSGVGLEPLTPSAFAALTTLPIFMHPQQSYY
LTPAPARKQKRKKDKGSKEAGKSKSSSSISSSSSKKEGGGCSHDHGRGGH
EHHHHDHHHSHHHRTHESAATANSTEAEDKETGRQSVSITPNACSGQGSH
AHADDLCKAEVHKHGHHYHQHKQQQEQQQHYVLADPLPPKAPTQTLSPHH
HKAIIDAAMVGGKPMTKWEAFRNKWLSGPSRPFAIMMLLTSVYLVAELAI
SVVTGSLALRADSFHMLSDVMALGTAWWAQVLAKKGPNDKATFGWGRAEV
IGALVNCAFVLGIAVEIILSAAEQVLDWSKFGSARMEDQRMTSSFMIYMG
ITGLALNSLGMVIFGGHHHHVGGNCPHSGHGGHGHHHHGHSHGHGHDCGS
AHPTTPSAHAGPSYTHADGDSCSGHGHKHEGKHGHHHHHHHHHHHHSPHT
PVAEGPLASPRLTTALLSPSGGDVADSKGVELPSSRFNDIEEGGEGEEEE
EDGLESQSQTPSQTPTHRHSHGENGGKTKKHVNLNMKATFLHLLGDALGS
FSIIISGLIIRYGEPVLGSYGMLADPICGLIIVAIILFTTVPVLRQSCRI
LLNFTPKGLNLASLRQELLALPHVLDVHALHVWTPSSGAELQASMHVIMS
SRGAKHEADEHLEDNTSLPFEKDETKQAPVPKGLTTTKRIRALLRAAGIT
IMTVQTEIIPESIAALPLPDGYRYRCLHEDESQAQYHHQETPSASAAAAA
AAAGAAFNASSSSSSTSSTATSITGGAGVSASDPALSPALPLSSHCVEDD
YVTCTITAATPHVGRGGRRAHFAASPSPTHARGGDEEEGSSRTASGGSSS
SSSSSSSSCSSSSCNEERGHLAAGASVAVVTKGKMET*

mRNA from alignment at chr16:97005..102662+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G00270.1 ID=NO16G00270.1|Name=NO16G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=5658bp|location=Sequence derived from alignment at chr16:97005..102662+ (Nannochloropsis oceanica)
ATGCCGGAGCCTTGCTTCATTTCCTCACCAGACAAAGAAGAGATCCAAAA
CTCGCGTGCGGAGGATTTAAAGCCTTCATGTAGCTGCCTACACTCAGGGC
CTGCCTGTGTACGTGTGGGGCGGAAGACGAATCTTTATGCTGGCATGAAT
AATCGTGTGCTATCGTGTGATGTTGAGTTGCCGTGGGGATAAAGCTCTCC
CGACCCCACTCGTTGCAGTGCAGTGCGTCATGGTCGCGCAAGTATGCCAT
CATTTCTTGGCCACTCTTGCCTCACTCCCTTGCTTTCCACTCTGCACCTC
CAAATGACAGACTGCTCGTAGGCCTCGCGTGTGCGTCAGAATCGTCGGAA
AAGCAGCAGAGCCCGAAAAAAGAACACGATCATCGTACTTGCCAGAAGCA
CTAGCACCGGCAGCAACATCCAGCAGCACCCAGCAGCACCGCGCCCGCAG
CAGCAACATGCCTGAAACGGGCGGTACCGGCAGCAGCGAGGATGTCGGGG
CACCAAATTGTTCATCCCCCTCGAAGCGACCTCCCCCCCTCTCCAACAAC
CCACGCCCCAAGAGCGGGGTGGGCCTGGAGCCCTTGACCCCTTCTGCCTT
TGCTGCCCTCACAACCCTCCCAATATTCATGCATCCTCAACAATCTTACT
ACCTGACGCCGGCCCCGGCCAGGAAGCAAAAAAGGAAGAAGGACAAGGGT
TCGAAGGAGGCGGGGAAGAGCAAGAGCAGCAGCAGCATCAGCAGCAGCAG
CAGCAAGAAGGAGGGAGGTGGGTGTAGCCACGATCACGGGCGTGGAGGGC
ACGAACACCATCATCACGACCATCATCACTCTCATCATCATCGTACCCAC
GAGTCCGCTGCCACGGCCAACTCGACGGAGGCCGAGGACAAGGAAACAGG
GAGACAGAGCGTATCGATCACCCCCAACGCCTGCTCCGGCCAGGGTAGCC
ACGCGCACGCAGACGACCTCTGCAAGGCCGAAGTCCATAAACACGGGCAT
CATTACCACCAGCACAAGCAGCAACAGGAGCAGCAGCAGCACTACGTACT
GGCGGATCCCCTTCCACCTAAGGCCCCAACGCAGACTCTTTCCCCGCACC
ACCACAAGGCCATCATAGACGCGGCGATGGTGGGGGGGAAGCCCATGACG
AAGTGGGAGGCGTTTAGGAACAAGTGGTTGAGTGGGCCGAGCCGGCCATT
CGCCATCATGATGCTGCTCACGAGCGTGTATCTGGTGGCCGAGCTGGCCA
TCTCAGTAGTGACGGGGTGAGGAAGGGAGGGAGGGATGGAGGGCGGGAGG
GCGGGAGGGCGGGAGGGCGGGAGGGCGGGAGGGCGGGCGTGGGAATGTAA
TATCCACACGGTCATATGCACAAATGTACGTGAGAGACCTACACTTGATA
GACACTACTGCAGATACCGCCAACGTCCAAGGCTCATTCACACACCCTAC
CCGCGACAACAACGACAGATCCCTGGCCCTGCGTGCCGACTCGTTCCACA
TGCTCTCGGATGTGATGGCTTTGGGCACGGCGTGGTGGGCGCAAGTCCTG
GCAAAAAAAGGGCCTAATGACAAGGCGACGTTCGGCTGGGGTCGTGCGGA
AGTCATCGGTGCCCTGGTGAATTGCGCCTTCGTTCTCGGTATTGCCGTGG
AGATTATCCTGTCGGCGGCCGAGCAGGTGCTGGACTGGTCAAAGGTGAGC
AGGAGGCGGTCGAGGGAGGGAGGGAGGGAGGTTTGGGGTAGGAGCACTCT
CTTCTTTGTCTTTTGTCATGTTTTCAATTTCTTCATCTACCTGTTGCACG
TCTGACTCGACCGTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCTCCCTCCCTTCCTCCCTCCCTCCCTCCAGTTCGGCAG
CGCCCGCATGGAGGACCAGCGCATGACGAGCTCCTTCATGATCTATATGG
GTATCACCGGCCTGGCCCTCAACTCCCTCGGTACGTGCCTTGCTTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCACACCCACCCCCCTCCCCCCCTCCCT
CCCTCCTTCCCTTCTCCTTCTCCTGGCGCAGGTATGGTCATCTTCGGCGG
GCATCATCACCACGTGGGAGGGAATTGTCCTCATTCCGGCCATGGGGGCC
ACGGCCATCACCATCACGGTCATAGCCACGGGCACGGGCATGACTGTGGC
AGCGCGCATCCCACCACCCCCTCAGCGCACGCGGGTCCCTCTTACACACA
CGCGGATGGCGACAGCTGTTCAGGCCATGGACATAAGCATGAAGGAAAGC
ATGGACACCACCATCACCACCACCACCACCATCATCATCATAGTCCTCAC
ACGCCCGTGGCTGAAGGCCCACTGGCCTCGCCCAGGCTGACGACAGCGTT
GCTGTCCCCCTCGGGTAGGCAGGGAGGGAGGGAAGAAGGGAGGGAGGGAG
GGGAGGGAAGAGAAACAGGAGAGGCGGCAAGAAAAAGTCTCTTTTCATTT
TTTTTAGAATTTCTCGTCGATCTCTGATGGTGACCCGCGTTCTCTTTCCT
CCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTACCTACCCCT
CCGCTATAGGCGGCGACGTGGCCGACAGCAAGGGCGTGGAGCTACCCTCC
TCCCGCTTCAATGACATCGAGGAAGGGGGGGAGGGCGAGGAGGAGGAGGA
GGACGGGCTGGAGAGCCAGAGCCAGACGCCATCCCAAACACCGACCCACC
GCCACAGCCACGGGGAGAACGGGGGGAAGACGAAGAAGCACGTCAACTTG
AACATGAAAGGTGAGGGAGGGAGGGAGGGATGGAGGGAGGGAGTGTGGGA
TGCCAGTGGCAAGCATGCTTATTTTTCTTCCTTTCCTCCCACCCTCCCTA
CTTCGCAGCCACCTTCCTCCACCTCCTCGGAGACGCACTGGGGTCGTTTA
GCATCATTATCTCCGGTCTCATCATCCGCTACGGCGAACCCGTGCTAGGT
AGGGAGCGGTGGGAAGGAGCGAGGGAGGGACGGAGGGAGAGGGGAAAAAG
AACGGAGGAAAAGATAGATGTGAACCATACTTTCCGGGTCTCACCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTTCCTTCCTTCCTTCCCTCCCCCTTTCCCACAGGCAGTT
ACGGCATGCTAGCGGATCCGATCTGCGGCCTGATCATCGTGGCCATCATC
CTTTTCACTACCGTGCCGGTCTTGCGCCAGGTAGGAAGGGAGGGAGGGAG
GGAGGGGGGGAGGGAGGGAGGGAGGGCGGGCGTGGTACACTCACACAGGC
TCACTACTGTTTCTCTGTCCCACCCTCATTCATCCCTCCCCTCCTCCCTC
CCTCCCTCCCTCTCCCCCTCCCTCCCTCCAGAGCTGCCGCATCCTGCTGA
ACTTCACGCCCAAAGGCCTTAACCTCGCCTCCCTCCGGCAAGAGCTCCTC
GCCCTCCCTCACGTCCTTGACGTCCACGCCCTGCATGTCTGGACTCCCTC
TTCCGGCGCCGAGGTGAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCGGTGTGCGTTTTAATTTGTCGGTGGGATC
ACACTTCTCACTTCTCACTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCAGCTGCAAGCGTCCATGCACGTGATCATGTCCAGCCGCGGGGCCAAG
CACGAGGCGGACGAACATCTGGAGGACAACACCAGCCTGCCCTTCGAGAA
AGGTGAGGGAGGGAGGGAGGAAGGGAGGGAGGGGGCGGGGAGCGGAAGAA
GGAGGAGCACGTCTTCGGTCGAACAAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGCACGTCGTGTGATGCCATACTTCCAGCCT
GCAGACCTCTGTCACTCACTCGACCCCCCCGCTCCCTCCCTCGCCAGACG
AGACGAAGCAAGCCCCCGTGCCCAAGGGCCTGACCACGACCAAGAGGATC
CGAGCTTTGTTACGCGCGGCGGGCATCACAATCATGACCGTGCAGGTAGG
GAGGGAGGGAGGGAGGGAGGAAGGGAGGGAAGGCAGATACAAGTGAAAAA
GTAGGTGTGAGATAGCCCTTGCCCACTCAACCATGATACCCTCCCTCCCT
CCTTTCTCCCCTCACTCCCTTTCCCCTTTCCCTCATTTTTTCAAAGACTG
AAATCATCCCTGAGTCCATCGCTGCTTTGCCGCTGCCGGACGGATACCGC
TACCGGTGCTTGCACGAGGACGAGGTAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGACCGAGGTTGTCGACTGAATGGAAACTTGCACTGACACCTTC
CCTCCTTCCTTCCCTCCCCCTCCCTCAGTCTCAAGCCCAATATCATCACC
AAGAGACCCCTTCCGCCTCTGCCGCCGCTGCCGCCGCCGCCGCCGGTGCT
GCGTTCAACGCCTCCTCCTCCTCCTCCTCCACCTCCTCCACCGCCACCTC
CATTACGGGCGGCGCGGGTGTGAGTGCGTCGGATCCCGCCCTCAGTCCCG
CCCTCCCCCTCTCTTCCCACTGCGTGGAAGACGATTATGTCACATGCACC
ATCACTGCGGCTACTCCTCACGTGGGGAGGGGAGGAAGGAGGGCGCACTT
CGCGGCTTCTCCATCTCCCACGCACGCTCGTGGTGGAGACGAGGAAGAGG
GGAGGTAAGGAACCTTTCTCAGCGCTGGAGCTGTCGAAGGCCGGGCCTAG
AAAGAGGGAGGGAGGGAAGGAGAGAGGGAGGAAAGAATGAGGGATTATGT
ATCCTCTGTGTGTGTATATATATGCATAAGTGGTTGTTGTGTGGATGTGG
GTGATAAAGGTGGGAAGGGGGAAAGGAGGAAGGGAAAGAGATTACAATCA
TGATGAGGCGGCTGGAAAGTAAATGCAACCTGTGTGTATACTCTGTGTGT
GTGTGTGAGAACGTGTGTGTGTGAACGTGTATGTGTGTGTGTGAACGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACAGATAAAATGA
GGTCGAGAGATAAGCTCAGAGAAATGCGGTAAAAGGGCAGGGGGGCAGGA
GCGGGTAGGACGGGGAAAAAGAGAGGAGGGAGGAAGGTGGCGTACAGTGT
CTGTTTTTCTCCGACTCCTGACGCTACAGGAGCGTGGAACGTATTCGGAC
AGTTGTTTATCTATATTTTTATACATTTATATTTTTTATTTTGTTATGCA
TTTACTTGACTAATTAACTATTTAGCACTTAATTGATAAAAATACCGATT
GACTTAAAATTAGCCCTGAAGATCAATCGAAGAATAATTTACGACAAAGC
AACAGCGAAAATAAGTCAAAAGGGATATCACTAAAAATTGTATTTACCAT
CGGGGAAAGATAGCAGTAGAACAGCCAGCGGCGGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCTGCAATGAAGAAAGAGG
CCATTTAGCAGCTGGGGCATCGGTAGCAGTAGTTACGAAGGGCAAAATGG
AAACATGA

Coding sequence (CDS) from alignment at chr16:97005..102662+

>NO16G00270.1 ID=NO16G00270.1|Name=NO16G00270.1|organism=Nannochloropsis oceanica|type=CDS|length=2964bp|location=Sequence derived from alignment at chr16:97005..102662+ (Nannochloropsis oceanica)
ATGCCGGAGCCTTGCTTCATTTCCTCACCAGACAAAGAAGAGATCCAAAA
CTCGCGTGCGGAGGATTTAAAGCCTTCATGTAGCTGCCTACACTCAGGGC
CTGCCTGTACTGCTCGTAGGCCTCGCGTGTGCGTCAGAATCGTCGGAAAA
GCAGCAGAGCCCGAAAAAAGAACACGATCATCGTACTTGCCAGAAGCACT
AGCACCGGCAGCAACATCCAGCAGCACCCAGCAGCACCGCGCCCGCAGCA
GCAACATGCCTGAAACGGGCGGTACCGGCAGCAGCGAGGATGTCGGGGCA
CCAAATTGTTCATCCCCCTCGAAGCGACCTCCCCCCCTCTCCAACAACCC
ACGCCCCAAGAGCGGGGTGGGCCTGGAGCCCTTGACCCCTTCTGCCTTTG
CTGCCCTCACAACCCTCCCAATATTCATGCATCCTCAACAATCTTACTAC
CTGACGCCGGCCCCGGCCAGGAAGCAAAAAAGGAAGAAGGACAAGGGTTC
GAAGGAGGCGGGGAAGAGCAAGAGCAGCAGCAGCATCAGCAGCAGCAGCA
GCAAGAAGGAGGGAGGTGGGTGTAGCCACGATCACGGGCGTGGAGGGCAC
GAACACCATCATCACGACCATCATCACTCTCATCATCATCGTACCCACGA
GTCCGCTGCCACGGCCAACTCGACGGAGGCCGAGGACAAGGAAACAGGGA
GACAGAGCGTATCGATCACCCCCAACGCCTGCTCCGGCCAGGGTAGCCAC
GCGCACGCAGACGACCTCTGCAAGGCCGAAGTCCATAAACACGGGCATCA
TTACCACCAGCACAAGCAGCAACAGGAGCAGCAGCAGCACTACGTACTGG
CGGATCCCCTTCCACCTAAGGCCCCAACGCAGACTCTTTCCCCGCACCAC
CACAAGGCCATCATAGACGCGGCGATGGTGGGGGGGAAGCCCATGACGAA
GTGGGAGGCGTTTAGGAACAAGTGGTTGAGTGGGCCGAGCCGGCCATTCG
CCATCATGATGCTGCTCACGAGCGTGTATCTGGTGGCCGAGCTGGCCATC
TCAGTAGTGACGGGATCCCTGGCCCTGCGTGCCGACTCGTTCCACATGCT
CTCGGATGTGATGGCTTTGGGCACGGCGTGGTGGGCGCAAGTCCTGGCAA
AAAAAGGGCCTAATGACAAGGCGACGTTCGGCTGGGGTCGTGCGGAAGTC
ATCGGTGCCCTGGTGAATTGCGCCTTCGTTCTCGGTATTGCCGTGGAGAT
TATCCTGTCGGCGGCCGAGCAGGTGCTGGACTGGTCAAAGTTCGGCAGCG
CCCGCATGGAGGACCAGCGCATGACGAGCTCCTTCATGATCTATATGGGT
ATCACCGGCCTGGCCCTCAACTCCCTCGGTATGGTCATCTTCGGCGGGCA
TCATCACCACGTGGGAGGGAATTGTCCTCATTCCGGCCATGGGGGCCACG
GCCATCACCATCACGGTCATAGCCACGGGCACGGGCATGACTGTGGCAGC
GCGCATCCCACCACCCCCTCAGCGCACGCGGGTCCCTCTTACACACACGC
GGATGGCGACAGCTGTTCAGGCCATGGACATAAGCATGAAGGAAAGCATG
GACACCACCATCACCACCACCACCACCATCATCATCATAGTCCTCACACG
CCCGTGGCTGAAGGCCCACTGGCCTCGCCCAGGCTGACGACAGCGTTGCT
GTCCCCCTCGGGCGGCGACGTGGCCGACAGCAAGGGCGTGGAGCTACCCT
CCTCCCGCTTCAATGACATCGAGGAAGGGGGGGAGGGCGAGGAGGAGGAG
GAGGACGGGCTGGAGAGCCAGAGCCAGACGCCATCCCAAACACCGACCCA
CCGCCACAGCCACGGGGAGAACGGGGGGAAGACGAAGAAGCACGTCAACT
TGAACATGAAAGCCACCTTCCTCCACCTCCTCGGAGACGCACTGGGGTCG
TTTAGCATCATTATCTCCGGTCTCATCATCCGCTACGGCGAACCCGTGCT
AGGCAGTTACGGCATGCTAGCGGATCCGATCTGCGGCCTGATCATCGTGG
CCATCATCCTTTTCACTACCGTGCCGGTCTTGCGCCAGAGCTGCCGCATC
CTGCTGAACTTCACGCCCAAAGGCCTTAACCTCGCCTCCCTCCGGCAAGA
GCTCCTCGCCCTCCCTCACGTCCTTGACGTCCACGCCCTGCATGTCTGGA
CTCCCTCTTCCGGCGCCGAGCTGCAAGCGTCCATGCACGTGATCATGTCC
AGCCGCGGGGCCAAGCACGAGGCGGACGAACATCTGGAGGACAACACCAG
CCTGCCCTTCGAGAAAGACGAGACGAAGCAAGCCCCCGTGCCCAAGGGCC
TGACCACGACCAAGAGGATCCGAGCTTTGTTACGCGCGGCGGGCATCACA
ATCATGACCGTGCAGACTGAAATCATCCCTGAGTCCATCGCTGCTTTGCC
GCTGCCGGACGGATACCGCTACCGGTGCTTGCACGAGGACGAGTCTCAAG
CCCAATATCATCACCAAGAGACCCCTTCCGCCTCTGCCGCCGCTGCCGCC
GCCGCCGCCGGTGCTGCGTTCAACGCCTCCTCCTCCTCCTCCTCCACCTC
CTCCACCGCCACCTCCATTACGGGCGGCGCGGGTGTGAGTGCGTCGGATC
CCGCCCTCAGTCCCGCCCTCCCCCTCTCTTCCCACTGCGTGGAAGACGAT
TATGTCACATGCACCATCACTGCGGCTACTCCTCACGTGGGGAGGGGAGG
AAGGAGGGCGCACTTCGCGGCTTCTCCATCTCCCACGCACGCTCGTGGTG
GAGACGAGGAAGAGGGGAGCAGTAGAACAGCCAGCGGCGGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCTGCAATGAAGA
AAGAGGCCATTTAGCAGCTGGGGCATCGGTAGCAGTAGTTACGAAGGGCA
AAATGGAAACATGA

Synonyms

Publications