NO16G00170.1, NO16G00170.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G00170.1
Unique Name	NO16G00170.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3127
Alignment location	chr16:61126..66249 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:61126..66249 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G00170.1 vs.
Match: OWZ22777.1 (hypothetical protein PHMEG_0002449 [Phytophthora megakarya])

HSP 1 Score: 442.2 bits (1136), Expect = 3.700e-120
Identity = 280/586 (47.78%), Postives = 389/586 (66.38%), Query Frame = 0

Query:    2 KLPQLQNLIKRDPSAYREEYLQQKRAYEAEARLFTLRPSRDSPRFLELVTFMSHVAACYAKEEEKEGKEEEKEGKAEEGVSVAVSLPMQLMALLEESAVVMLPATRKTLVQALILLRNRGLLEVNTLLRLVFRLFKVPDKGLREMLYTYVIADIRGLNSKARNEKVNKELQGFMYVMLKDEHSVAAKRSLEAMVELYRRRVWVDPRTVNVIASACLSNSTRLSLMAVHFFLGIEQRMADDEEEELAVGKEAHNMNVNTHSHSKKTKARARDTERQQKKRKDLLKKMQGAAEEGEGRGGGGSEQQVLFPAIQVLHDPQGLAEKLFKKLKASNERFEAKLLYMDLLSRLVGSHKLLLLNFYPYVQRYLNSHQQHVTKILAYLIQACHELVPPEEVHPLLKNVANAFVADRCSSEVIAVGINALREMVVRVPSVLHEEGMDGFVQDLAMYSKKKDKSTVMAARAFLNAVRDLYPSLLQRKDRGKHHIVDQKPAAYGELKIHDGVDGAELL-QAWEEGRLDAPEEEEDEEEEGWEEEEEEEEEEEEEEEEEDRWMDASSAGEEN-----EDEEEEEEEEEEGEDEEEEKE 582
            KLPQLQN++KRDP  YR E+L Q R +E+E +LF L+P+++S  F  LV F+SHVA CY  +                      + P Q+M LL ++ +V+ P  RKTLVQ+L+LLRNRGL++  TLL+L F LF+ PDK LRE+LY ++++DIR LN+  RN KVNK LQ F++ MLKDE   AA +SL+ ++EL++R++W D R+VNVI +AC S +T+L +MA+ FFLGI+  + +DEE++    K    + V+ H+HSKKTK R R T +   K K   K+                +    FPAI++L+DPQG+A++  K LK+  ERFE KLL M+ + R++G HKL++L FYP +QRYL SHQQ+VT ILAYL+Q+CH+ +PPEE+ P++K++A+ FV +RCSSEVIAVGIN+LRE+  RVP +L  EGMD  V DL  Y++ +DK+ VMAAR  LN +RD++P LL+RKDRGK H    KP  +GEL   +GVDGAELL +A   GR D      ++ ++GWE +    +E+  E+E    W+D SS  E+N      DEEEEEEEEEE     E+K+
Sbjct:   14 KLPQLQNMVKRDPVGYRSEFLMQLRHFESEFQLFLLQPTKESAHFGALVNFLSHVAKCYPVD--------------------MAAFPEQIMGLLRDNYLVLEPELRKTLVQSLMLLRNRGLVDAITLLKLFFELFRCPDKRLRELLYKHIVSDIRQLNATTRNVKVNKALQNFLFEMLKDESEHAAVKSLQVLMELFKRKIWHDQRSVNVIVTACTSKNTKLLVMALSFFLGIDDDILEDEEQQKKEKKAL--VAVDFHAHSKKTKKRQRHTLQALSKNKRARKREL--------------DFMATFPAIELLNDPQGIADRQLKLLKSCTERFEVKLLMMNFIGRVLGFHKLVVLPFYPLLQRYLQSHQQNVTAILAYLVQSCHDEIPPEELLPIVKSIAHNFVTERCSSEVIAVGINSLRELFRRVPLLLECEGMDVLVSDLVQYNRARDKTIVMAARGVLNLIRDIHPVLLKRKDRGKFHNDAAKPHRFGELVASEGVDGAELLAEAEAAGRFDG-----EDNKDGWEVDSSASDEDGSEDE----WVDISSDEEDNGRGNGNDEEEEEEEEEEEVPSVEQKD 554

The following BLAST results are available for this feature:

BLAST of NO16G00170.1 vs.

BLAST of NO16G00170.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
OWZ22777.1	3.700e-120	47.78	hypothetical protein PHMEG_0002449 [Phytophthora m...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G00170	NO16G00170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G00170.1	NO16G00170.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G00170.1.cds1	NO16G00170.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds2	NO16G00170.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds3	NO16G00170.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds4	NO16G00170.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds5	NO16G00170.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds6	NO16G00170.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds7	NO16G00170.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds8	NO16G00170.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds9	NO16G00170.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds10	NO16G00170.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds11	NO16G00170.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00170.1.cds12	NO16G00170.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:61126..66249+
coding sequence from alignment at chr16:61126..66249+

mRNA sequence

>NO16G00170.1 ID=NO16G00170.1|Name=NO16G00170.1|organism=Nannochloropsis oceanica|type=mRNA|length=3127bp
CGCTACTCAAGCTATCCCTCCCTCCTCCATGCTCCCTGCTTTCAAGGCCT
ATCAATACAATTAAGCTCGCACATCCCCGAAGCACTACGGTGAGGGTATT
TGCCACACGCTGCATGTGACACTTGCTTCCAATGGTGGCAGCTTTACTGT
AAAATTCCAAAATGATGGCATTAATATCCGAGCTGTGTTCGTGTGGCCCA
CAGAGTATTCACTTTCCGTCCCCCCCTCCGCACACCATGCACAGAAAGCA
CAGGAATCTGCACGTCAAGCAGCGCGGCCAGCTTATCTAAGAAAACTGCA
GGAGTAGCAAGTGCAGCGGCTGCACCCTGAGCAGCCATGGCGCCCAACAA
AGTAGAACTCGTGGTACGTTTCAGCCCTCTGCTCGTCTATCCCTCTGCTC
TAGCTGCCACTCTCTTTCTACCAGTCTTTTCCCCTCAAGTCCTAGCACTT
TTTCAACAGTTCCTCTTCCCTTTCTTTTCAGTGTGTTTTCTTCCGCGCAC
CACGGCTTCCCCCCGCCCTTTCACATCACATAACCTCCCCACCCTCTCGT
CTCTTCCCCGACCTCCAGATGAAACTCCCCCAGCTCCAGAATCTGATCAA
GCGCGACCCCAGCGCCTACCGCGAGGAGTACCTGCAGCAGAAGCGTGCAT
ATGAGGCCGAGGCTCGTTTGTTTACACTTCGTCCTTCCCGTGACTCTCCC
CGCTTCTTGGAGCTTGTCACGTTCATGTCGCACGTGGCGGCGTGCTACGC
AAAGGAGGAGGAGAAGGAGGGCAAGGAGGAGGAGAAGGAGGGCAAAGCGG
AGGAGGGGGTGTCAGTAGCCGTATCCTTACCGATGCAACTGATGGCACTG
CTGGAGGAGAGCGCGGTGGTGATGCTGCCGGCCACGCGCAAGACCCTGGT
GCAGGCCTTGATTTTGCTGAGAAACCGAGGGCTGCTCGAGGTGAATACCC
TCCTTCGCCTGGTCTTCCGCCTCTTCAAGGTGCCCGACAAGGGCCTACGG
GAGATGCTGTATACCTACGTCATCGCCGACATCCGCGGCCTCAACAGCAA
GGCCCGAAACGAGAAGGTAAACAAGGAGCTGCAGGGCTTCATGTACGTCA
TGCTCAAGGACGAACATTCCGTTGCCGCCAAGCGCTCCCTCGAGGCCATG
GTTGAACTGTATCGCCGGCGTGTTTGGGTGGACCCCCGCACCGTGAACGT
CATCGCTTCCGCTTGCCTCTCCAACTCGACCCGTCTTTCCCTTATGGCAG
TGCATTTCTTCCTCGGCATCGAGCAACGTATGGCCGACGACGAGGAAGAG
GAGCTGGCAGTTGGGAAGGAAGCGCACAACATGAATGTTAACACCCACAG
TCACTCCAAGAAAACCAAGGCCAGGGCCCGGGACACGGAGCGCCAGCAGA
AAAAGCGGAAAGACCTCCTGAAGAAGATGCAGGGCGCGGCGGAGGAGGGG
GAGGGAAGGGGAGGGGGAGGGAGTGAGCAGCAAGTCCTTTTTCCGGCGAT
ACAGGTCTTGCACGATCCCCAGGGCCTGGCCGAGAAGCTCTTTAAGAAGC
TCAAGGCCAGCAATGAACGCTTCGAGGCCAAGCTGCTCTACATGGACCTG
CTCTCCCGCCTCGTGGGCTCACACAAACTCCTCCTCCTTAACTTTTACCC
CTACGTCCAGCGCTACCTCAACAGCCACCAGCAGCACGTGACCAAGATTC
TGGCGTACCTCATCCAGGCATGCCACGAGCTCGTCCCGCCCGAGGAGGTC
CATCCCTTATTAAAAAATGTCGCCAATGCCTTCGTTGCCGACCGATGCTC
CTCGGAGGTGATCGCCGTGGGTATCAATGCGCTGCGAGAGATGGTGGTGC
GAGTGCCCTCCGTGCTGCACGAGGAGGGCATGGACGGTTTCGTTCAGGAC
CTGGCCATGTACAGCAAAAAGAAGGACAAGTCCACCGTCATGGCAGCGCG
GGCCTTCCTCAACGCCGTGCGCGACCTCTACCCCTCCCTCCTCCAGCGGA
AGGACAGAGGCAAGCACCATATCGTCGACCAAAAACCCGCTGCCTACGGC
GAGCTCAAAATCCACGATGGGGTCGATGGCGCGGAGCTGCTTCAAGCCTG
GGAAGAAGGGCGGCTTGACGCCCCTGAGGAGGAGGAGGACGAAGAGGAAG
AGGGTTGGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAG
GAGGAGGAGGACAGATGGATGGATGCGTCGTCGGCGGGGGAGGAGAATGA
GGACGAGGAAGAGGAGGAAGAGGAGGAAGAGGAAGGGGAGGACGAAGAGG
AAGAGAAGGAGGAAGAGGAAGAGGGCTCTTCCGATGAAGAGGCCCACGAT
GAGGAAGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGAGAAGGA
AGCAGTCGGAGTGTCCTCTTTCATCTCTTCCTCCTCCTCCTCTCCCTCCT
CCCTCCCGACCCCCCTCCCTTCCTCGCACATCCAGAGCAAAAAACGGGCC
CGAGCCGCGAAGAAGGAAGCAAGGACGGAGGCTCGTGCCACGCGACAGCA
GCAGCGCGCTGGTGCGGTGCTTGCCTCCCTGTTACGGCCGGCGGGAGGAG
ACGTGAGGGAGAGGGTGGAGGCACAGCGGGTCTTGTCGAGCGAAGACTTT
GCTCAGATTAAACGGCTCAAGAAACGGTTTGAAGAGGCGAGGAGGGACCC
GAGGAAGGTAAAAGAGGGAGGGAAGGAGGGGGTGGGGGGGGAGAAGGAGC
AGGTGTTGTTGATGATGTCAGGGGGAAAGAAGAGGGGGAGGATGGTGGAA
GAGGAGGGGGGGGAAGAGGAAGAGAGAGGGATGGAAGGGAGGATGAGGCC
GGAGGACCTGGAGGGGTATTCAAAGAGGAAGAGGGCTTGTAAGGAGGAAA
GGCTGATGAAGATTGTGGCGGGCAAGAGCACGTTTGAGCATGCAGGGCAC
GCAGGCGGACTGACCAACACAGAGAAGAAGAGGAAGAAGAATTATATGAT
GGTGAGGAAGGGGAAGAGGGGAGTGTTCTCCAAGTTGAGAGACACGCAGC
AGGAGAGAAAGATTAGGAAGGTCAAGGGGAAGAAGAGTGAGTATTCGCGG
GAGGCGCGGAAGAGGCGTCGGTGTTAG

protein sequence of NO16G00170.1

>NO16G00170.1-protein ID=NO16G00170.1-protein|Name=NO16G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=853bp
MKLPQLQNLIKRDPSAYREEYLQQKRAYEAEARLFTLRPSRDSPRFLELV
TFMSHVAACYAKEEEKEGKEEEKEGKAEEGVSVAVSLPMQLMALLEESAV
VMLPATRKTLVQALILLRNRGLLEVNTLLRLVFRLFKVPDKGLREMLYTY
VIADIRGLNSKARNEKVNKELQGFMYVMLKDEHSVAAKRSLEAMVELYRR
RVWVDPRTVNVIASACLSNSTRLSLMAVHFFLGIEQRMADDEEEELAVGK
EAHNMNVNTHSHSKKTKARARDTERQQKKRKDLLKKMQGAAEEGEGRGGG
GSEQQVLFPAIQVLHDPQGLAEKLFKKLKASNERFEAKLLYMDLLSRLVG
SHKLLLLNFYPYVQRYLNSHQQHVTKILAYLIQACHELVPPEEVHPLLKN
VANAFVADRCSSEVIAVGINALREMVVRVPSVLHEEGMDGFVQDLAMYSK
KKDKSTVMAARAFLNAVRDLYPSLLQRKDRGKHHIVDQKPAAYGELKIHD
GVDGAELLQAWEEGRLDAPEEEEDEEEEGWEEEEEEEEEEEEEEEEEDRW
MDASSAGEENEDEEEEEEEEEEGEDEEEEKEEEEEGSSDEEAHDEEDEEE
EEEEEEVEEKEAVGVSSFISSSSSSPSSLPTPLPSSHIQSKKRARAAKKE
ARTEARATRQQQRAGAVLASLLRPAGGDVRERVEAQRVLSSEDFAQIKRL
KKRFEEARRDPRKVKEGGKEGVGGEKEQVLLMMSGGKKRGRMVEEEGGEE
EERGMEGRMRPEDLEGYSKRKRACKEERLMKIVAGKSTFEHAGHAGGLTN
TEKKRKKNYMMVRKGKRGVFSKLRDTQQERKIRKVKGKKSEYSREARKRR
RC*

mRNA from alignment at chr16:61126..66249+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G00170.1 ID=NO16G00170.1|Name=NO16G00170.1|organism=Nannochloropsis oceanica|type=mRNA|length=5124bp|location=Sequence derived from alignment at chr16:61126..66249+ (Nannochloropsis oceanica)
CGCTACTCAAGCTATCCCTCCCTCCTCCATGCTCCCTGCTTTCAAGGCCT
ATCAATACAATTAAGCTCGCACATCCCCGAAGCACTACGGTGAGGGTATT
TGCCACACGCTGCATGTGACACTTGCTTCCAATGGTGGCAGCTTTACTGT
AAAATTCCAAAATGATGGCATTAATATCCGAGCTGTGTTCGTGTGGCCCA
CAGAGTATTCACTTTCCGTCCCCCCCTCCGCACACCATGCACAGAAAGCA
CAGGAATCTGCACGTCAAGCAGCGCGGCCAGCTTATCTAAGAAAACTGCA
GGAGTAGCAAGTGCAGCGGCTGCACCCTGAGCAGCCATGGCGCCCAACAA
AGTAGAACTCGTGGTACGTTTCAGCCCTCTGCTCGTCTATCCCTCTGCTC
TAGCTGCCACTCTCTTTCTACCAGTCTTTTCCCCTCAAGTCCTAGCACTT
TTTCAACAGTTCCTCTTCCCTTTCTTTTCAGTGTGTTTTCTTCCGCGCAC
CACGGCTTCCCCCCGCCCTTTCACATCACATAACCTCCCCACCCTCTCGT
CTCTTCCCCGACCTCCAGATGAAACTCCCCCAGCTCCAGAATCTGATCAA
GCGCGACCCCAGCGCCTACCGCGAGGAGTACCTGCAGCAGAAGCGTGCAT
ATGAGGCCGAGGCTCGTTTGTTTACACTTCGTCCTTCCCGTGACTCTCCC
CGCTTCTTGGAGCTTGTCACGTTCATGTCGCACGTGGCGGCGTGCTACGC
AAAGGAGGAGGAGAAGGAGGGCAAGGAGGAGGAGAAGGAGGGCAAAGCGG
AGGAGGGGGTGTCAGTAGCCGTATCCTTACCGATGCAACTGATGGCACTG
CTGGAGGAGAGCGCGGTGGTGATGCTGCCGGCCACGCGCAAGACCCTGGT
GCAGGCCTTGATTTTGCTGAGAAACCGAGGGCTGCTCGAGGTGAGAGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGCGAGGGAGGGAGGTAAGGA
GGTTGGGAATAAGGAAAGATGGAAAGAGTATGGGAGGGAAATCATGAGGG
CTTCACTTGTGGCCTTAGCCCCCAGGGGATGTACCCAGCGACAAAAGGCT
GTGAATGTATTGCCGGACATCATCATGCCTCCCTCCCTCCTCCCCCTCTC
CATTTTTCCGTCCTTCCCCTCTTCCTCCCTTCCTAGGTGAATACCCTCCT
TCGCCTGGTCTTCCGCCTCTTCAAGGTGCCCGACAAGGGCCTACGGGAGA
TGCTGTATACCTACGTCATCGCCGACATCCGCGGCCTCAACAGCAAGGCC
CGAAACGAGAAGGTGAAGTTCCCCCTCCCTCCCTTCCTTCCTCCCTCCTT
CCCTTCCTCCCACCCTAGATGTCTAAGATCTCTCTCTCTCTCTATCTCTC
TCTCTCTCACACTCACTCACTCACTCTCTCTCTCTCCCTCTTCCATCCAC
AGGTAAACAAGGAGCTGCAGGGCTTCATGTACGTCATGCTCAAGGACGAA
CATTCCGTTGCCGCCAAGCGCTCCCTCGAGGTACGGCACCTTTCCATCCC
TCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCATCCTGCCTCCCTCGCTC
TTTTCCATTCATGTCACCCCTCCTCCCCCCCCTCCTTTTCCGTCCCTTCC
TCAGGCCATGGTTGAACTGTATCGCCGGCGTGTTTGGGTGGACCCCCGCA
CCGTGAACGTCATCGCTTCCGCTTGCCTCTCCAACGTACGTCCCCTCCCT
CCCTCTCTCCCTCCCTCCTTCCCTCCTTTACTCTGTGTTGACCTTATTCA
CCTGGTTATTTCTCCCTCCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTC
GAGTCGACCCGTCTTTCCCTTATGGCAGTGCATTTCTTCCTCGGCATCGA
GCAACGTATGGCCGACGACGAGGAAGAGGAGCTGGCAGTTGGTACGTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTTCTTCATTC
CCTCACTTCTCTTCTTTCTGGCCCTCCACGGAGACGCCTTCGGAGTAATT
GAACTGGAAGGACACCTATCGACCTCCTCTAACCCCCCCCTCTCCTCCCC
TCCCTCCCTCCCCCCCCATAGGGAAGGAAGCGCACAACATGAATGTTAAC
ACCCACAGTCACTCCAAGAAAACCAAGGCCAGGGCCCGGGACACGGAGCG
CCAGCAGAAAAAGCGGAAAGACCTCCTGAAGAAGATGCAGGGCGCGGCGG
AGGAGGGGGAGGGAAGGGGAGGGGGAGGGAGTGAGCAGCAAGTCCTTTTT
CCGGCGATACAGGTGGGTCTGAGGGGATGCCAGGGCATAATTTTCTGTTG
TCGAGACGGCACAGAAGAGGGAAGGAGGGAGGGAGCGTGCGGGGGAAGGG
AGGTAGCATGACGGCCATGATGGCACGTAAAACATCACGTGGCAAAGTGT
TAACGCTCCACCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTAGGTCTTG
CACGATCCCCAGGGCCTGGCCGAGAAGCTCTTTAAGAAGCTCAAGGCCAG
CAATGAACGGTACATTCCTCCCTCCTTCTCGCCTTCCCTCTTTCCGTCCT
TCTTTCCCGTCCTCCACCCCTCTATTTTTCCATCACGGTCACCTCCTCTT
TCAGCATCACGCAACCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCCCAGCTTCGAGGCCAAGCTGCTCTACA
TGGACCTGCTCTCCCGCCTCGTGGGCTCACACAAACTCCTCCTCCTTAAC
TTTTACCCCTACGTCCAGCGCTACCTCAACAGGTGGGCCTCCCTCCCTCC
CTCCCCCCCTCCTTTCTTGTCGCGTTCTCCCTCGTATCTTCATCTCCCGG
CTGTCCGCCTCACCCGTCCCTCCCTCCCTCCCTTCCCCCCCCCCTCTCTC
CCCCCTTCCCTGCAGCCACCAGCAGCACGTGACCAAGATTCTGGCGTACC
TCATCCAGGCATGCCACGAGCTCGTCCCGCCCGAGGAGGTCCATCCCTTA
TTAAAAAATGTCGCCAATGCCTTCGTTGCCGGTGCGTTTATAAGTCTGAA
TATATAGATGTTATATTATATAGATATGGACAGATAGATGCAGAAACATA
GAAATATTGATGCATGCACATTGCATACATCGACACACATATATACACTA
TATACATTAATGTATTCATAGGGTGGGAAGGTGGGAAGGTCGCCCTTCCT
CCCTTCCGCCATTCTTTCCCCCTCCCTCCTTTTCTTCTTATTCCTTTCCC
TCCTTTTCTTCCTAATCCCCTCCCTCCTTTTCTTCCTATTCCTCTCTCTC
CTTTTCTTCCTATTCCTCTCCCTCCTACCTGTGTTTCGTGTTCTGGAGTG
ACGCCGAGTCCGACCTCCTCCGTAGACCCCCGAGGCCCACCCTACCCTCC
CTTCCTCCCTCCCTCCCTCCCCTCCTCCCTCCAGACCGATGCTCCTCGGA
GGTGATCGCCGTGGGTATCAATGCGCTGCGAGAGATGGTGGTGCGAGTGC
CCTCCGTGCTGCACGAGGAGGGCATGGACGGTTTCGTTCAGGTATGTCCG
GGCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCTCACGTCCACCTG
GCTTCCACGCTTTGTCTACTTCGAAAGCCGTCTCTTGGGAAAATGAATTG
TATGGCCGATCTCCTTCCCTCCCTCCCTCAGGACCTGGCCATGTACAGCA
AAAAGAAGGACAAGTCCACCGTCATGGCAGCGCGGGCCTTCCTCAACGCC
GTGCGCGACCTCTACCCCTCCCTCCTCCAGCGGAAGGACAGAGGCAAGCA
CCATATCGTCGACCAAAAACCCGCTGCCTACGGTACGTCTTTCATCCCTC
CCTCCTTCCCCTCATTTCTGGCATCTGTTTTGATTTGTCTATCCTGTCAC
GCGACGCCTTATTTCCTCCCTCCCTCCTGTCCCTCCCTCCCTCCCTCCCT
CCCTCTCCCTCTCCCTCCCTTCCTTCCTTCCTCCTTCCATTGCAGGCGAG
CTCAAAATCCACGATGGGGTCGATGGCGCGGAGCTGCTTCAAGCCTGGGA
AGAAGGGCGGCTTGACGCCCCTGAGGAGGAGGAGGACGAAGAGGAAGAGG
GTTGGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAG
GAGGAGGACAGATGGATGGATGCGTCGTCGGCGGGGGAGGAGAATGAGGA
CGAGGAAGAGGAGGAAGAGGAGGAAGAGGAAGGGGAGGACGAAGAGGAAG
AGAAGGAGGAAGAGGAAGAGGGCTCTTCCGATGAAGAGGCCCACGATGAG
GAAGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGAGAAGGAAGC
AGTCGGAGTGTCCTCTTTCATCTCTTCCTCCTCCTCCTCTCCCTCCTCCC
TCCCGACCCCCCTCCCTTCCTCGCACATCCAGAGCAAAAAACGGGCCCGA
GCCGCGAAGAAGGAAGCAAGGACGGAGGCTCGTGCCACGCGACAGCAGCA
GCGCGCTGGTGCGGTGCTTGCCTCCCTGTTACGGCCGGCGGGAGGAGACG
TGAGGGAGAGGGTGGAGGCACAGCGGGTCTTGTCGAGCGAAGACTTTGCT
CAGATTAAACGGCTCAAGAAACGGTTTGAAGAGGCGAGGAGGGACCCGAG
GAAGGTAAAAGAGGGAGGGAAGGAGGGGGTGGGGGGGGAGAAGGAGCAGG
TGTTGTTGATGATGTCAGGGGGAAAGAAGAGGGGGAGGATGGTGGAAGAG
GAGGGGGGGGAAGAGGAAGAGAGAGGGATGGAAGGGAGGATGAGGCCGGA
GGACCTGGAGGGGTATTCAAAGAGGAAGAGGGCTTGTAAGGAGGAAAGGC
TGATGAAGATTGTGGCGGGCAAGAGCACGTTTGAGCATGCAGGGCACGCA
GGCGGACTGACCAACACAGAGAAGAAGAGGAAGAAGAATTATATGATGGT
GAGGAAGGGGAAGAGGGGAGTGTTCTCCAAGTTGAGAGACACGCAGCAGG
AGAGAAAGATTAGGAAGGTCAAGGGGAAGAAGAGTGAGTATTCGCGGGAG
GCGCGGAAGAGGCGTCGGTGTTAG

Coding sequence (CDS) from alignment at chr16:61126..66249+

>NO16G00170.1 ID=NO16G00170.1|Name=NO16G00170.1|organism=Nannochloropsis oceanica|type=CDS|length=2559bp|location=Sequence derived from alignment at chr16:61126..66249+ (Nannochloropsis oceanica)
ATGAAACTCCCCCAGCTCCAGAATCTGATCAAGCGCGACCCCAGCGCCTA
CCGCGAGGAGTACCTGCAGCAGAAGCGTGCATATGAGGCCGAGGCTCGTT
TGTTTACACTTCGTCCTTCCCGTGACTCTCCCCGCTTCTTGGAGCTTGTC
ACGTTCATGTCGCACGTGGCGGCGTGCTACGCAAAGGAGGAGGAGAAGGA
GGGCAAGGAGGAGGAGAAGGAGGGCAAAGCGGAGGAGGGGGTGTCAGTAG
CCGTATCCTTACCGATGCAACTGATGGCACTGCTGGAGGAGAGCGCGGTG
GTGATGCTGCCGGCCACGCGCAAGACCCTGGTGCAGGCCTTGATTTTGCT
GAGAAACCGAGGGCTGCTCGAGGTGAATACCCTCCTTCGCCTGGTCTTCC
GCCTCTTCAAGGTGCCCGACAAGGGCCTACGGGAGATGCTGTATACCTAC
GTCATCGCCGACATCCGCGGCCTCAACAGCAAGGCCCGAAACGAGAAGGT
AAACAAGGAGCTGCAGGGCTTCATGTACGTCATGCTCAAGGACGAACATT
CCGTTGCCGCCAAGCGCTCCCTCGAGGCCATGGTTGAACTGTATCGCCGG
CGTGTTTGGGTGGACCCCCGCACCGTGAACGTCATCGCTTCCGCTTGCCT
CTCCAACTCGACCCGTCTTTCCCTTATGGCAGTGCATTTCTTCCTCGGCA
TCGAGCAACGTATGGCCGACGACGAGGAAGAGGAGCTGGCAGTTGGGAAG
GAAGCGCACAACATGAATGTTAACACCCACAGTCACTCCAAGAAAACCAA
GGCCAGGGCCCGGGACACGGAGCGCCAGCAGAAAAAGCGGAAAGACCTCC
TGAAGAAGATGCAGGGCGCGGCGGAGGAGGGGGAGGGAAGGGGAGGGGGA
GGGAGTGAGCAGCAAGTCCTTTTTCCGGCGATACAGGTCTTGCACGATCC
CCAGGGCCTGGCCGAGAAGCTCTTTAAGAAGCTCAAGGCCAGCAATGAAC
GCTTCGAGGCCAAGCTGCTCTACATGGACCTGCTCTCCCGCCTCGTGGGC
TCACACAAACTCCTCCTCCTTAACTTTTACCCCTACGTCCAGCGCTACCT
CAACAGCCACCAGCAGCACGTGACCAAGATTCTGGCGTACCTCATCCAGG
CATGCCACGAGCTCGTCCCGCCCGAGGAGGTCCATCCCTTATTAAAAAAT
GTCGCCAATGCCTTCGTTGCCGACCGATGCTCCTCGGAGGTGATCGCCGT
GGGTATCAATGCGCTGCGAGAGATGGTGGTGCGAGTGCCCTCCGTGCTGC
ACGAGGAGGGCATGGACGGTTTCGTTCAGGACCTGGCCATGTACAGCAAA
AAGAAGGACAAGTCCACCGTCATGGCAGCGCGGGCCTTCCTCAACGCCGT
GCGCGACCTCTACCCCTCCCTCCTCCAGCGGAAGGACAGAGGCAAGCACC
ATATCGTCGACCAAAAACCCGCTGCCTACGGCGAGCTCAAAATCCACGAT
GGGGTCGATGGCGCGGAGCTGCTTCAAGCCTGGGAAGAAGGGCGGCTTGA
CGCCCCTGAGGAGGAGGAGGACGAAGAGGAAGAGGGTTGGGAGGAAGAGG
AAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGACAGATGG
ATGGATGCGTCGTCGGCGGGGGAGGAGAATGAGGACGAGGAAGAGGAGGA
AGAGGAGGAAGAGGAAGGGGAGGACGAAGAGGAAGAGAAGGAGGAAGAGG
AAGAGGGCTCTTCCGATGAAGAGGCCCACGATGAGGAAGACGAGGAGGAG
GAGGAGGAGGAGGAGGAGGTGGAGGAGAAGGAAGCAGTCGGAGTGTCCTC
TTTCATCTCTTCCTCCTCCTCCTCTCCCTCCTCCCTCCCGACCCCCCTCC
CTTCCTCGCACATCCAGAGCAAAAAACGGGCCCGAGCCGCGAAGAAGGAA
GCAAGGACGGAGGCTCGTGCCACGCGACAGCAGCAGCGCGCTGGTGCGGT
GCTTGCCTCCCTGTTACGGCCGGCGGGAGGAGACGTGAGGGAGAGGGTGG
AGGCACAGCGGGTCTTGTCGAGCGAAGACTTTGCTCAGATTAAACGGCTC
AAGAAACGGTTTGAAGAGGCGAGGAGGGACCCGAGGAAGGTAAAAGAGGG
AGGGAAGGAGGGGGTGGGGGGGGAGAAGGAGCAGGTGTTGTTGATGATGT
CAGGGGGAAAGAAGAGGGGGAGGATGGTGGAAGAGGAGGGGGGGGAAGAG
GAAGAGAGAGGGATGGAAGGGAGGATGAGGCCGGAGGACCTGGAGGGGTA
TTCAAAGAGGAAGAGGGCTTGTAAGGAGGAAAGGCTGATGAAGATTGTGG
CGGGCAAGAGCACGTTTGAGCATGCAGGGCACGCAGGCGGACTGACCAAC
ACAGAGAAGAAGAGGAAGAAGAATTATATGATGGTGAGGAAGGGGAAGAG
GGGAGTGTTCTCCAAGTTGAGAGACACGCAGCAGGAGAGAAAGATTAGGA
AGGTCAAGGGGAAGAAGAGTGAGTATTCGCGGGAGGCGCGGAAGAGGCGT
CGGTGTTAG

Synonyms

Publications