NO15G03210.1, NO15G03210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G03210.1
Unique NameNO15G03210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1041
Alignment locationchr15:912977..914600 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:912977..914600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G03210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G03210NO15G03210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G03210.1NO15G03210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G03210.1.cds1NO15G03210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G03210.1.cds2NO15G03210.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G03210.1.cds3NO15G03210.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G03210.1.cds4NO15G03210.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G03210.1 ID=NO15G03210.1|Name=NO15G03210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1041bp
ATGTTCCGCCACTCTGCTCTCCTCTTTGTGGCCCTCCTCTGCGTGGCGGA
TGCCCAATTTGAAGCCCTGACCGTGAACAAGAACAAGACCAAGACGGGCA
ACAAGCTACCGAAAGGTACCCACAACGAGAAGACCAAACTGCGCAAGGTG
GATGGCTTCAACCTCTGTACCCAGGAATATGATGCCTACATCGGCGCGGC
AGGTATCGCTGGAACAGGCGCATTTTCGTACCGCGTTTACCCTGGAGACT
GCGATGAGGTGGATTCCACGACCGCGCAAATCGGCTCCTTGGCCGCCACG
TGCTCTGGCAACCCCTACGAGGGCGTGACCTTCACCATAAACACTCCAGC
ATCCACCGAAGGCTTCTCCAATCCTTTGGATGAAGTTGGACCGTGCACTG
ACATAGCTGGCTGCACTTACGACCCCTCTGGCGCGCCTCAATTTTTGGAA
AGTCTAATTCCTGATATTGTTATCCCCGATAATGTTACCAGTGACGAGGT
GCAGGCGTTTGTGAATGACACGTGCCTTGACATACTGGAAAACTTCGACC
TTTTTAAACTTTCCGATTGCTCCGCCGAGCTTCGCCTTAGCGGGGACCAC
CGCAAGAACAAGCATCCGGGAAGTACTTTGTCTTTCGACTTTATGACCAA
CACCACTTTAGTCCCCGCTGGCAGCACCTACACAACCATCACTCAGTACG
GACTTGGCGGAACTGCTGATAATACTACTTTTGCTGGTGTTGGTACTTTT
ACTCATGTTACCTCTGTAGACTTGTTCGCTTACCAGGTGATCGACAGCAT
CACGTGCGTTGTCCGGCCTGATACGATTGACACGACGTTCAGTAAGATCT
ATAGTGGAAGCGGCCGCTTTGCAAAATACCCTGCCTCGAAGGTGGCGTCG
GTGGAATTAGATACGATTTTGGTTGAGTCTCCCGAGAATGCACTTAATCC
TATCAACTCGTTCCAGATTTTGAGCCAGATATGGGAGACCCAGCTGGAGG
TGAAGTATGTGAAGCCTTACCTTCATTCCAGCATGCTCTAA
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protein sequence of NO15G03210.1

>NO15G03210.1-protein ID=NO15G03210.1-protein|Name=NO15G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp
MFRHSALLFVALLCVADAQFEALTVNKNKTKTGNKLPKGTHNEKTKLRKV
DGFNLCTQEYDAYIGAAGIAGTGAFSYRVYPGDCDEVDSTTAQIGSLAAT
CSGNPYEGVTFTINTPASTEGFSNPLDEVGPCTDIAGCTYDPSGAPQFLE
SLIPDIVIPDNVTSDEVQAFVNDTCLDILENFDLFKLSDCSAELRLSGDH
RKNKHPGSTLSFDFMTNTTLVPAGSTYTTITQYGLGGTADNTTFAGVGTF
THVTSVDLFAYQVIDSITCVVRPDTIDTTFSKIYSGSGRFAKYPASKVAS
VELDTILVESPENALNPINSFQILSQIWETQLEVKYVKPYLHSSML*
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mRNA from alignment at chr15:912977..914600-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G03210.1 ID=NO15G03210.1|Name=NO15G03210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1624bp|location=Sequence derived from alignment at chr15:912977..914600- (Nannochloropsis oceanica)
ATGTTCCGCCACTCTGCTCTCCTCTTTGTGGCCCTCCTCTGCGTGGCGGG
TAAGTAAGTGGAGGAAGATGCTGTGATGGACTTACTTGTAAGAGCAAAGG
CAACATGCTCGTAAAATCTCCTCAAAATATGTCGTGCAGAGCTGCTTCGC
GTGTCCTTTTGTCAAGTTCCTTTGGCTTACTATTTATGGCGCAAGTCTAA
GTAGGCCGATCGACATTGTGTCTTACAGACATCATCCCCTCATGGGCACT
GTCAAGGCTATTGAACTAGGATAATCCATCACAACCACACCACACATGCA
CTCATTGCAATAGATGCCCAATTTGAAGCCCTGACCGTGAACAAGAACAA
GACCAAGACGGGCAACAAGCTACCGAAAGGTACCCACAACGAGAAGACCA
AACTGCGCAAGGTGGATGGCTTCAACCTCTGTACCCAGGAATATGATGCC
TACATCGGCGCGGCAGGTATCGCTGGAACAGGCGCATTTTCGTACCGCGT
TTACCCTGGAGACTGCGATGAGGTACGCCAGAATGACGAAAGTATCTTTC
CCAGACCTTATATATCTATTCACGTTGTATGGTACCGGACAGAAAGGTGC
CTGGCCCTTAACTCACCGGAGTACATCTCACAATGAATTATCAGGTGGAT
TCCACGACCGCGCAAATCGGCTCCTTGGCCGCCACGTGCTCTGGCAACCC
CTACGAGGGCGTGACCTTCACCATAAACACTCCAGCATCCACCGAAGGCT
TCTCCAATCCTTTGGATGAAGTTGGACCGTGCACTGACATAGCTGGCTGC
ACTTACGACCCCTCTGGCGCGCCTCAATTTTTGGAAAGTCTAATTCCTGA
TATTGTTATCCCCGATAATGTTACCAGTGACGAGGTGCAGGCGTTTGTGA
ATGACACGTGCCTTGACATACTGGAAAACTTCGACCTTTTTAAACTTTCC
GATTGCTCCGCCGAGCTTCGCCTTAGCGGGGACCACCGCAAGAACAAGCA
TCCGGGAAGTACTTTGTCTTTCGACTTTATGACCAACACCACTTTAGTCC
CCGGTACGTTGTAGCGACTATACATTTGAAAGAAAGCATGCGTGTCAAAG
AGAGGGGATAGGGTCGATGCATTTGAGTTTGTGATTGGAAAATATTTTCC
TAAACCTCAATCCAACAATCCCACGTCTCGCACCATGAATAAGATCCTCA
CCATCCTCCCCTTCTTCCCTCCCATGTTTATTATCACATCTTTCCCGAAG
CTGGCAGCACCTACACAACCATCACTCAGTACGGACTTGGCGGAACTGCT
GATAATACTACTTTTGCTGGTGTTGGTACTTTTACTCATGTTACCTCTGT
AGACTTGTTCGCTTACCAGGTGATCGACAGCATCACGTGCGTTGTCCGGC
CTGATACGATTGACACGACGTTCAGTAAGATCTATAGTGGAAGCGGCCGC
TTTGCAAAATACCCTGCCTCGAAGGTGGCGTCGGTGGAATTAGATACGAT
TTTGGTTGAGTCTCCCGAGAATGCACTTAATCCTATCAACTCGTTCCAGA
TTTTGAGCCAGATATGGGAGACCCAGCTGGAGGTGAAGTATGTGAAGCCT
TACCTTCATTCCAGCATGCTCTAA
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Coding sequence (CDS) from alignment at chr15:912977..914600-

>NO15G03210.1 ID=NO15G03210.1|Name=NO15G03210.1|organism=Nannochloropsis oceanica|type=CDS|length=1041bp|location=Sequence derived from alignment at chr15:912977..914600- (Nannochloropsis oceanica)
ATGTTCCGCCACTCTGCTCTCCTCTTTGTGGCCCTCCTCTGCGTGGCGGA
TGCCCAATTTGAAGCCCTGACCGTGAACAAGAACAAGACCAAGACGGGCA
ACAAGCTACCGAAAGGTACCCACAACGAGAAGACCAAACTGCGCAAGGTG
GATGGCTTCAACCTCTGTACCCAGGAATATGATGCCTACATCGGCGCGGC
AGGTATCGCTGGAACAGGCGCATTTTCGTACCGCGTTTACCCTGGAGACT
GCGATGAGGTGGATTCCACGACCGCGCAAATCGGCTCCTTGGCCGCCACG
TGCTCTGGCAACCCCTACGAGGGCGTGACCTTCACCATAAACACTCCAGC
ATCCACCGAAGGCTTCTCCAATCCTTTGGATGAAGTTGGACCGTGCACTG
ACATAGCTGGCTGCACTTACGACCCCTCTGGCGCGCCTCAATTTTTGGAA
AGTCTAATTCCTGATATTGTTATCCCCGATAATGTTACCAGTGACGAGGT
GCAGGCGTTTGTGAATGACACGTGCCTTGACATACTGGAAAACTTCGACC
TTTTTAAACTTTCCGATTGCTCCGCCGAGCTTCGCCTTAGCGGGGACCAC
CGCAAGAACAAGCATCCGGGAAGTACTTTGTCTTTCGACTTTATGACCAA
CACCACTTTAGTCCCCGCTGGCAGCACCTACACAACCATCACTCAGTACG
GACTTGGCGGAACTGCTGATAATACTACTTTTGCTGGTGTTGGTACTTTT
ACTCATGTTACCTCTGTAGACTTGTTCGCTTACCAGGTGATCGACAGCAT
CACGTGCGTTGTCCGGCCTGATACGATTGACACGACGTTCAGTAAGATCT
ATAGTGGAAGCGGCCGCTTTGCAAAATACCCTGCCTCGAAGGTGGCGTCG
GTGGAATTAGATACGATTTTGGTTGAGTCTCCCGAGAATGCACTTAATCC
TATCAACTCGTTCCAGATTTTGAGCCAGATATGGGAGACCCAGCTGGAGG
TGAAGTATGTGAAGCCTTACCTTCATTCCAGCATGCTCTAA
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Synonyms
Publications