NO15G03170.1, NO15G03170.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G03170.1
Unique Name	NO15G03170.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3552
Alignment location	chr15:892419..897244 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:892419..897244 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G03170.1 vs.
Match: EWM22280.1 (protein kinase 2 [Nannochloropsis gaditana])

HSP 1 Score: 619.0 bits (1595), Expect = 1.200e-173
Identity = 297/338 (87.87%), Postives = 315/338 (93.20%), Query Frame = 0

Query:  141 SIKDFDLLKVLGKGSFGKVMLVRFKGSRELHAMKTLRKEALIRRSQLAHTSTERYILQHIHHPFLMKLSYAFQTKQKLYMVVDYMAGGELFFWLKKGRFGESRAKLYAAEITCALEALHKHNIVYRDLKPENILLDADGHIRLTDFGLSKANVTGYGISGGAHTFCGTPEYLAPEILENRGHGKGIDWWSLGTLLYEMICGLPPFYDQNVQKMYKKILTASLLPSHKALSEDAKSLVAGLLERKVAHRLGCGATGALEIKQHPFFAGLDWQKVTERRYQPEFVPPKARRRSVDVDNFDKEFTQEVCADSVVHTTLTAQQEELANFEGFTYDPRGGRLR 479
            S+     L+VLGKGSFGKVMLVRFKGSREL+AMKTLRKEALIRRSQLAHTSTERYILQHIHHPFLM+LSYAFQTKQKLYMVVDYMAGGELFFWLKKG+FG++RAKLYAAEI CALEALHKHN+VYRDLKPENILLDADGHIRLTDFGL KANVTGYG+ GGAHTFCGTPEYLAPE+LEN+GHGKGIDWWSLGTLLYEMICGLPPFYDQNVQKMYKKI+TA L PS K LSEDAK+++ GLLERKVAHRLGCG  GA EIK HPFFAGLDW KVT R+YQPEFVPP+ARRRSVDVDNFDKEFTQEVC DSVV T LTAQQEE+ANFEGFTYDPRG RLR
Sbjct:   15 SLNFISFLQVLGKGSFGKVMLVRFKGSRELYAMKTLRKEALIRRSQLAHTSTERYILQHIHHPFLMRLSYAFQTKQKLYMVVDYMAGGELFFWLKKGKFGQTRAKLYAAEILCALEALHKHNVVYRDLKPENILLDADGHIRLTDFGLCKANVTGYGVDGGAHTFCGTPEYLAPEVLENKGHGKGIDWWSLGTLLYEMICGLPPFYDQNVQKMYKKIMTAPLNPS-KLLSEDAKAIIQGLLERKVAHRLGCGPAGAAEIKNHPFFAGLDWDKVTNRKYQPEFVPPRARRRSVDVDNFDKEFTQEVCQDSVVQTILTAQQEEMANFEGFTYDPRGARLR 351

The following BLAST results are available for this feature:

BLAST of NO15G03170.1 vs.

BLAST of NO15G03170.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22280.1	1.200e-173	87.87	protein kinase 2 [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G03170	NO15G03170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03170.1	NO15G03170.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03170.1.cds1	NO15G03170.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds2	NO15G03170.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds3	NO15G03170.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds4	NO15G03170.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds5	NO15G03170.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds6	NO15G03170.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds7	NO15G03170.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03170.1.cds8	NO15G03170.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:892419..897244-
coding sequence from alignment at chr15:892419..897244-

mRNA sequence

>NO15G03170.1 ID=NO15G03170.1|Name=NO15G03170.1|organism=Nannochloropsis oceanica|type=mRNA|length=3552bp
AGGACGCAAGTAGACTCCTGCTATTAGTCTAGCTTCCCCACCCACCCCTT
GTAAGAGGAAAAATGGGGAACAAACTCGACTTCCCTTCCCACGGCGCCCA
CACCACTGCTACTGCCTGCACAGATGGAGGGGGGGACAGGACCATGGCTG
CGCGTGCTCCTACGCTCCGCACCGGTTCCCCTCCTCCTTCGTCCTCGTCG
CCCTCCTCCTCCCCCAAGACCTCTTCCAAGGCCCATAGGAGCACATCTCC
ACACTCCACCACCAAGAAGCTTGGCACTCTATCCCCTACTGGCATGATGG
CAGCATCGGGCGCGGGCATCAGCAGCGGCGTCGCTGGCCCGGGCCATAGC
CCTACCATTGTCTTGCGGTCACTGGACTCGGAGGGCGAGAGCCCACGGGG
AGAGGGAGAGGGAAGGGCGGATGTGGAATGCGAGGTGACGGATATCTTGC
GTCGTTACTCGCATGTGGGGGGGAAAGCGGTTTCGATCAAGGACTTTGAT
TTGTTGAAGGTGCTGGGCAAAGGCAGCTTTGGCAAGGTCATGCTGGTCCG
TTTCAAGGGCTCTCGAGAACTGCATGCGATGAAGACCCTACGGAAGGAGG
CCTTGATCCGTCGGAGCCAGCTGGCGCATACGTCGACGGAGCGCTATATT
TTGCAACACATCCACCATCCGTTCCTGATGAAGCTTTCCTACGCGTTTCA
GACAAAGCAGAAACTGTACATGGTGGTGGATTATATGGCTGGAGGGGAGC
TGTTCTTCTGGCTCAAGAAGGGGAGGTTTGGGGAGAGCCGGGCCAAATTG
TATGCGGCCGAAATCACATGTGCCCTGGAAGCGCTACACAAGCACAACAT
CGTCTACCGCGACCTGAAGCCGGAGAATATTCTCCTGGATGCGGATGGGC
ACATTCGTCTCACTGACTTCGGTCTTTCCAAGGCCAATGTCACGGGCTAC
GGCATCAGCGGCGGTGCACACACCTTCTGCGGAACGCCTGAGTACCTCGC
GCCTGAGATTCTGGAAAACAGAGGCCACGGCAAGGGCATCGACTGGTGGT
CTCTGGGAACCCTCCTCTACGAGATGATCTGCGGCCTTCCTCCCTTCTAC
GACCAGAACGTCCAAAAGATGTACAAAAAAATCCTCACCGCCTCCCTGCT
TCCCTCTCACAAGGCCCTATCGGAGGACGCCAAATCCCTCGTGGCTGGAT
TGCTCGAACGAAAGGTCGCCCACAGGCTCGGCTGTGGCGCCACAGGCGCA
CTGGAGATCAAGCAACATCCGTTTTTTGCAGGGCTGGATTGGCAGAAGGT
GACGGAGCGCCGCTACCAGCCAGAGTTTGTGCCTCCCAAGGCCCGCAGAA
GGTCCGTCGACGTGGACAATTTCGACAAGGAGTTCACGCAGGAGGTGTGT
GCGGACAGCGTGGTGCATACAACGCTCACAGCCCAGCAGGAGGAGCTGGC
GAATTTCGAAGGATTTACGTACGACCCCCGGGGTGGTCGACTTCGCTAAG
GAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGAAGGGAGGGAGGAAGGGT
GTGAGGTCGGTTGGCAGTGGAGGCTTCATTTATAAGTTTTGGGAGGAAGA
GCAGCAGGGAGGGCGGGAATTAGGGTTTATAGAAGAAAGTAGGATTAGCT
TAGAGAAATCGAATCATATGTTTATATTTATATGAAGGAAGGGAAAAAGC
AAGAGAGAGAGAGCGAGAGAAAGAGAGAGAAGGGAGAGGAGGAAGAAAAA
GACAGCAGGACCAGCGGCCGGACAAAAAATGAGAGAGAGCGAGAGAACCC
ATTCACACACTCTGTACACACACTCACACACTCACACACCGCCACCGCCG
CGATATCTTTGAATCTGACTTCAAATAATGCGTTGTGAATTCACGATATG
GGGGCGTGGTAGGGCGAGTACACGCGTTCACAGCCAGCAAAGGAAAAGGA
GGAAGGAAAATGGAATGTGTGTGGTGTCTACTAATTGCTTAATATTTTGG
GGTTGTAAGTCAATCTTGACAGGTATGATTTTGACGGCCGGGTGGGGGAT
CGATCGTGAGCGCAACATTGGAGGAGAGATCAAGCGGGTCTTTGCGAGAA
AGAGGGGGAGGAGGAGGAGGAGGAGGAGGGAAGAGGAGAAGGAGTAGAAG
TAGGAGAATGATGCACACACAAGCAAGAGGAAGGAATGAGGGATGAGGAG
GGAAGAAGAAGGGCTCAGAGAAGGTGTGATTTAATAGCGGGGGGGATGAC
TGAAATGGCATGGGGAAGTTGTTTCGAAGGGATCGGAACGGGCCATAGAA
TGAGTGATGAGAGTGATGAGTGTGAGGGGTTCATAGATAGAGAGACAAGA
GAGATGATGTGAGTGTGTATAGTGTGACAGAGAGAAAGAGAGAGGGAGAG
AGAGAGAGGGAGGGAGGGAGACGGAGAGAGAGAGAGAAAGAAAGAGGGAG
AGAGTGGTATTTACACACATCAAGTCAGTCGTACGCCATGTCCAAATGCA
ATAAGAGGAAAGCGAAAGAAGGAATGAGACGACATATCCCATCAGGACGA
TCTTGATCCATCACTAGCTGGGATGCCCACATCAAGCTTCTCTTGCCATC
TCTTGCTCTTCTCTGCGTCTCTGCTTCTGCGAAGGATTATTCCTTCTCTA
TTTTTTTCCCTTCTGCTTCCTCATCATCACCTTCCCCTTCTCTTTCATCA
CAATCTTCTTCTATTTCTTTTTCTCGACCGTGCTTTATATAGAGAATATA
AATACATTCCCATCACCTATTCCTCCTCCTTATTCATCTTGTTCTATTCC
TCACACCCCTCCTTCTCTCTTTCCTTCACCTCCCCCCTCCTCCTCCTTTC
GCCTCCTCCTTCGCCTCCTCCTCCTCCTCCTCCCTAAGGAACCCCTTCGA
ATACCTACCCAAGAGTCTTTCCATATTAATCTATCGCTCCTGAGAAACCC
TACTCTCCCTCTCCCTCATCCTCCCTCTCCCTTCTCTCCTTCCGAATCTC
CAATCACACACTCCCTTATTCCCCCTTGCCCTCGACACCCTACCTGGAGG
ACGGCGGCACTACAGAGGGCGCCGAGTCCAATGCCGCCATCAATGCAGCA
AACACGTCCTCCTCTTCCTCCTCACCCTCATCTCTTCCCTTTTCCAGAGC
CTCAATAGGCGACGAGCCTCTCTGAACGTTTTGTCCTTCTTCTTCATCTT
CTTCTTCGTCTTCCTCCTCCTCTTCCGTCTCCTCCTCTTCCTCCTCATCC
TCCTCCTCCTTCTCCGCCTCCTCCCTCCCTTCCTCCTCCTCCTCCCCCCC
CTCCCCCTCCTTTTTTAAAGCAGCAGCTGCTGCAGTCGCCTCTCGACTTG
CCAAGCGTGCTGCAGCTCGAGCGAGAGGATCGGTCACGTCTTCCATGTCT
AGGGCAGTCATCTCATTGTACTCGTCACCATCCACCGCGTACAACCCCTC
CTCATACAACGCCGCCTCCCGCTCAAAATCGATCTCCCCTCTCTCCTTCC
ATCCCTCCATCAACATCTTGTCATCCATCAACGTATACCCCTCCACCAAC
TC

protein sequence of NO15G03170.1

>NO15G03170.1-protein ID=NO15G03170.1-protein|Name=NO15G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MGNKLDFPSHGAHTTATACTDGGGDRTMAARAPTLRTGSPPPSSSSPSSS
PKTSSKAHRSTSPHSTTKKLGTLSPTGMMAASGAGISSGVAGPGHSPTIV
LRSLDSEGESPRGEGEGRADVECEVTDILRRYSHVGGKAVSIKDFDLLKV
LGKGSFGKVMLVRFKGSRELHAMKTLRKEALIRRSQLAHTSTERYILQHI
HHPFLMKLSYAFQTKQKLYMVVDYMAGGELFFWLKKGRFGESRAKLYAAE
ITCALEALHKHNIVYRDLKPENILLDADGHIRLTDFGLSKANVTGYGISG
GAHTFCGTPEYLAPEILENRGHGKGIDWWSLGTLLYEMICGLPPFYDQNV
QKMYKKILTASLLPSHKALSEDAKSLVAGLLERKVAHRLGCGATGALEIK
QHPFFAGLDWQKVTERRYQPEFVPPKARRRSVDVDNFDKEFTQEVCADSV
VHTTLTAQQEELANFEGFTYDPRGGRLR*

mRNA from alignment at chr15:892419..897244-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G03170.1 ID=NO15G03170.1|Name=NO15G03170.1|organism=Nannochloropsis oceanica|type=mRNA|length=4826bp|location=Sequence derived from alignment at chr15:892419..897244- (Nannochloropsis oceanica)
AGGACGCAAGTAGACTCCTGCTATTAGTCTAGCTTCCCCACCCACCCCTT
GTAAGAGGAAAAATGGGGAACAAACTCGACTTCCCTTCCCACGGCGCCCA
CACCACTGCTACTGCCTGCACAGATGGAGGGGGGGACAGGACCATGGCTG
CGCGTGCTCCTACGCTCCGCACCGGTTCCCCTCCTCCTTCGTCCTCGTCG
CCCTCCTCCTCCCCCAAGACCTCTTCCAAGGCCCATAGGAGCACATCTCC
ACACTCCACCACCAAGAAGCTTGGCACTCTATCCCCTACTGGCATGATGG
CAGCATCGGGCGCGGGCATCAGCAGCGGCGTCGCTGGCCCGGGCCATAGC
CCTACCATTGTCTTGCGGTCACTGGACTCGGAGGGCGAGAGCCCACGGGG
AGAGGGAGAGGGAAGGGCGGATGTGGAATGCGAGGTGACGGATATCTTGC
GTCGTTACTCGCATGTGGGGGGGAAAGCGGTTTCGATCAAGGACTTTGAT
TTGTTGAAGGTATGTCTGTTTGTTTTGGTGGTGAGGAGGGAGAGAGGGAG
GGAGGGAAAGAAGGAAGGGGATTCCCATGCTCGCTCAGGGTAGTCTCTTA
TTATTACACATTAATTCTCATCTCTTCCTCCCTCCTTCTCTCCCCATCCT
AGGTGCTGGGCAAAGGCAGCTTTGGCAAGGTCATGCTGGTCCGTTTCAAG
GGCTCTCGAGAACTGCATGCGATGAAGACCCTACGGAAGGAGGCCTTGAT
CCGTCGGAGCCAGCTGGCGCATACGTCGACGGAGCGCTATATTTTGCAAC
ACATCCACCATCCGTTCCTGATGAAGCTTTCCTACGCGTTTCAGACAAAG
CAGAAACTGTACATGGTCAGTGCCTGCCTTCCATCTGTCCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTTCCGCCTCTTAGATGACGT
AAGTTCTTCTGTTCCTTTAGACAGACGCAATCGTCAGCATCGACTCACCC
CCTCCCTCTTTCTCTCCCTGCCTTCCTCCCTCTTTCCCTCTTTCCCTCCT
TTCCTTTCTCAGGTGGTGGATTATATGGCTGGAGGGGAGCTGTTCTTCTG
GCTCAAGAAGGGGAGGTTTGGGGAGAGCCGGGCCAAATTGTATGCGGCCG
AAATCACATGTGCCCTGGAAGCGCTACACAAGCACAACATCGTCTACCGG
TAGGTGGAGAAAGGGAATGATAGAGGGAGGGAAGGAGGGAAGGAGGGAAG
GAGGGAAGGAGGGAAGGAGGGAAGGAGAAAAGGAGGGAGGGAAGGAGGGA
AGGAGGGAGGGAGGGAGGGAGGAAGGGGAAAGGGAAGGAGGATCATGCCA
CGGCTTTTTCCCGGGTGAGATGCCTCGTGCATAAAGCAGGGGTTTGACAA
CCACTCCTCTCTCCCTCCCTCCCCTCCTCCCTCCTTCCCTCCCGTCCTTC
CTCCTTCCTTCCAACCGCAGCGACCTGAAGCCGGAGAATATTCTCCTGGA
TGCGGATGGGCACATTCGTCTCACTGACTTCGGTCTTTCCAAGGCCAATG
TCACGGGCTACGGCATCAGCGGCGGTGCACACACCTTCTGCGGAACGCCT
GAGGTATTCTGTCCTTCCCTCCCCCCTTCCCTCCCTACCCTCCCTCCTCT
CCCTTCTTCACTGCTTCTGCCGCGCTCTTGCTTCGAACCACGTCCTACAG
GCCTCCCTCACGTTTGTCCCTCTCTCCTTCCCTCCCTCAGTACCTCGCGC
CTGAGATTCTGGAAAACAGAGGCCACGGCAAGGGCATCGACTGGTGGTCT
CTGGGAACCCTCCTCTACGAGATGATCTGCGGCCTTCCTCCCTTCTACGA
CCAGAACGTCCAAAAGATGTACAAAAAAATCCTCACCGCCTCCCTGCTTC
CCTCTCACAAGGTAGGTATTCCCCCTCTCTCCCTCCCTCCCTCCCTCCTT
CCCTTCCTCCCTTCCTCCCTCCCTTCCTCCATTCCTCCATACATATGCGG
CCAGCTTCGCCTTCTCCCTCAAGCTGTAATAACCAACAGCTGTCTTCCCT
CCCTACCGTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCTCAGGCCCTATC
GGAGGACGCCAAATCCCTCGTGGCTGGATTGCTCGAACGAAAGGTCGCCC
ACAGGCTCGGCTGTGGCGCCACAGGCGCACTGGAGATCAAGCAACATCCG
TTTTTTGCAGGGCTGGATTGGCAGAAGGTGCGGAGGGAGGAAGGAAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGCAACGCCCTTCA
TATGTTCTTGTCTCTTACTCACCGACTCCCCCATCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGTGACGGAGCGCCGCTACCA
GCCAGAGTTTGTGCCTCCCAAGGCCCGCAGAAGGTCCGTCGACGTGGACA
ATTTCGACAAGGTAGGGAGGGAGGAAGGGAGGGAAGGAGGGGGGGATTAT
GGCATGGAGTGCCCACTGTCCTACGCACGGCGATCATTCACCACCCCCCT
CTTCACCCTCCTTCCCGCCTCCGTCCCTCCCTTCCTCCCTCCCTGCACCT
CAGGAGTTCACGCAGGAGGTGTGTGCGGACAGCGTGGTGCATACAACGCT
CACAGCCCAGCAGGAGGAGCTGGCGAATTTCGAAGGATTTACGTACGACC
CCCGGGGTGGTCGACTTCGCTAAGGAGGGAGGGAGGGAGGGAGGGAAGGA
GGGAGGAAGGGAGGGAGGAAGGGTGTGAGGTCGGTTGGCAGTGGAGGCTT
CATTTATAAGTTTTGGGAGGAAGAGCAGCAGGGAGGGCGGGAATTAGGGT
TTATAGAAGAAAGTAGGATTAGCTTAGAGAAATCGAATCATATGTTTATA
TTTATATGAAGGAAGGGAAAAAGCAAGAGAGAGAGAGCGAGAGAAAGAGA
GAGAAGGGAGAGGAGGAAGAAAAAGACAGCAGGACCAGCGGCCGGACAAA
AAATGAGAGAGAGCGAGAGAACCCATTCACACACTCTGTACACACACTCA
CACACTCACACACCGCCACCGCCGCGATATCTTTGAATCTGACTTCAAAT
AATGCGTTGTGAATTCACGATATGGGGGCGTGGTAGGGCGAGTACACGCG
TTCACAGCCAGCAAAGGAAAAGGAGGAAGGAAAATGGAATGTGTGTGGTG
TCTACTAATTGCTTAATATTTTGGGGTTGTAAGTCAATCTTGACAGGTAT
GATTTTGACGGCCGGGTGGGGGATCGATCGTGAGCGCAACATTGGAGGAG
AGATCAAGCGGGTCTTTGCGAGAAAGAGGGGGAGGAGGAGGAGGAGGAGG
AGGGAAGAGGAGAAGGAGTAGAAGTAGGAGAATGATGCACACACAAGCAA
GAGGAAGGAATGAGGGATGAGGAGGGAAGAAGAAGGGCTCAGAGAAGGTG
TGATTTAATAGCGGGGGGGATGACTGAAATGGCATGGGGAAGTTGTTTCG
AAGGGATCGGAACGGGCCATAGAATGAGTGATGAGAGTGATGAGTGTGAG
GGGTTCATAGATAGAGAGACAAGAGAGATGATGTGAGTGTGTATAGTGTG
ACAGAGAGAAAGAGAGAGGGAGAGAGAGAGAGGGAGGGAGGGAGACGGAG
AGAGAGAGAGAAAGAAAGAGGGAGAGAGTGGTATTTACACACATCAAGTC
AGTCGTACGCCATGTCCAAATGCAATAAGAGGAAAGCGAAAGAAGGAATG
AGACGACATATCCCATCAGGACGATCTTGATCCATCACTAGCTGGGATGC
CCACATCAAGCTTCTCTTGCCATCTCTTGCTCTTCTCTGCGTCTCTGCTT
CTGCGAAGGATTATTCCTTCTCTATTTTTTTCCCTTCTGCTTCCTCATCA
TCACCTTCCCCTTCTCTTTCATCACAATCTTCTTCTATTTCTTTTTCTCG
ACCGTGCTTTATATAGAGAATATAAATACATTCCCATCACCTATTCCTCC
TCCTTATTCATCTTGTTCTATTCCTCACACCCCTCCTTCTCTCTTTCCTT
CACCTCCCCCCTCCTCCTCCTTTCGCCTCCTCCTTCGCCTCCTCCTCCTC
CTCCTCCCTAAGGAACCCCTTCGAATACCTACCCAAGAGTCTTTCCATAT
TAATCTATCGCTCCTGAGAAACCCTACTCTCCCTCTCCCTCATCCTCCCT
CTCCCTTCTCTCCTTCCGAATCTCCAATCACACACTCCCTTATTCCCCCT
TGCCCTCGACACCCTACCTGGAGGACGGCGGCACTACAGAGGGCGCCGAG
TCCAATGCCGCCATCAATGCAGCAAACACGTCCTCCTCTTCCTCCTCACC
CTCATCTCTTCCCTTTTCCAGAGCCTCAATAGGCGACGAGCCTCTCTGAA
CGTTTTGTCCTTCTTCTTCATCTTCTTCTTCGTCTTCCTCCTCCTCTTCC
GTCTCCTCCTCTTCCTCCTCATCCTCCTCCTCCTTCTCCGCCTCCTCCCT
CCCTTCCTCCTCCTCCTCCCCCCCCTCCCCCTCCTTTTTTAAAGCAGCAG
CTGCTGCAGTCGCCTCTCGACTTGCCAAGCGTGCTGCAGCTCGAGCGAGA
GGATCGGTCACGTCTTCCATGTCTAGGGCAGTCATCTCATTGTACTCGTC
ACCATCCACCGCGTACAACCCCTCCTCATACAACGCCGCCTCCCGCTCAA
AATCGATCTCCCCTCTCTCCTTCCATCCCTCCATCAACATCTTGTCATCC
ATCAACGTATACCCCTCCACCAACTC

Coding sequence (CDS) from alignment at chr15:892419..897244-

>NO15G03170.1 ID=NO15G03170.1|Name=NO15G03170.1|organism=Nannochloropsis oceanica|type=CDS|length=1437bp|location=Sequence derived from alignment at chr15:892419..897244- (Nannochloropsis oceanica)
ATGGGGAACAAACTCGACTTCCCTTCCCACGGCGCCCACACCACTGCTAC
TGCCTGCACAGATGGAGGGGGGGACAGGACCATGGCTGCGCGTGCTCCTA
CGCTCCGCACCGGTTCCCCTCCTCCTTCGTCCTCGTCGCCCTCCTCCTCC
CCCAAGACCTCTTCCAAGGCCCATAGGAGCACATCTCCACACTCCACCAC
CAAGAAGCTTGGCACTCTATCCCCTACTGGCATGATGGCAGCATCGGGCG
CGGGCATCAGCAGCGGCGTCGCTGGCCCGGGCCATAGCCCTACCATTGTC
TTGCGGTCACTGGACTCGGAGGGCGAGAGCCCACGGGGAGAGGGAGAGGG
AAGGGCGGATGTGGAATGCGAGGTGACGGATATCTTGCGTCGTTACTCGC
ATGTGGGGGGGAAAGCGGTTTCGATCAAGGACTTTGATTTGTTGAAGGTG
CTGGGCAAAGGCAGCTTTGGCAAGGTCATGCTGGTCCGTTTCAAGGGCTC
TCGAGAACTGCATGCGATGAAGACCCTACGGAAGGAGGCCTTGATCCGTC
GGAGCCAGCTGGCGCATACGTCGACGGAGCGCTATATTTTGCAACACATC
CACCATCCGTTCCTGATGAAGCTTTCCTACGCGTTTCAGACAAAGCAGAA
ACTGTACATGGTGGTGGATTATATGGCTGGAGGGGAGCTGTTCTTCTGGC
TCAAGAAGGGGAGGTTTGGGGAGAGCCGGGCCAAATTGTATGCGGCCGAA
ATCACATGTGCCCTGGAAGCGCTACACAAGCACAACATCGTCTACCGCGA
CCTGAAGCCGGAGAATATTCTCCTGGATGCGGATGGGCACATTCGTCTCA
CTGACTTCGGTCTTTCCAAGGCCAATGTCACGGGCTACGGCATCAGCGGC
GGTGCACACACCTTCTGCGGAACGCCTGAGTACCTCGCGCCTGAGATTCT
GGAAAACAGAGGCCACGGCAAGGGCATCGACTGGTGGTCTCTGGGAACCC
TCCTCTACGAGATGATCTGCGGCCTTCCTCCCTTCTACGACCAGAACGTC
CAAAAGATGTACAAAAAAATCCTCACCGCCTCCCTGCTTCCCTCTCACAA
GGCCCTATCGGAGGACGCCAAATCCCTCGTGGCTGGATTGCTCGAACGAA
AGGTCGCCCACAGGCTCGGCTGTGGCGCCACAGGCGCACTGGAGATCAAG
CAACATCCGTTTTTTGCAGGGCTGGATTGGCAGAAGGTGACGGAGCGCCG
CTACCAGCCAGAGTTTGTGCCTCCCAAGGCCCGCAGAAGGTCCGTCGACG
TGGACAATTTCGACAAGGAGTTCACGCAGGAGGTGTGTGCGGACAGCGTG
GTGCATACAACGCTCACAGCCCAGCAGGAGGAGCTGGCGAATTTCGAAGG
ATTTACGTACGACCCCCGGGGTGGTCGACTTCGCTAA

Synonyms

Publications