NO15G03120.1, NO15G03120.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G03120.1
Unique Name	NO15G03120.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2822
Alignment location	chr15:867137..872005 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:867137..872005 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G03120.1 vs.
Match: EWM22288.1 (Stress-induced protein SRP1/TIP1 [Nannochloropsis gaditana])

HSP 1 Score: 666.0 bits (1717), Expect = 1.400e-187
Identity = 412/749 (55.01%), Postives = 491/749 (65.55%), Query Frame = 0

Query:   19 QWGLDGSAWPIVHGSRESLDNTQLATPLDAALHLYNSQGLTPSSTVEASSSSSSSSSSSSSSSMASYHALVGTRKGEDEE--VYQQVLAAMRRFLLLGAKEE-KKGEEGGIEEAVRKLDKKITFSMANANPVSIITEQVNETEQRLWTSGFGNVMVFRQVQGEPELELLAEYEHGGFDFHYHGSYSFVAKQKQEGGGEEGMEEGPSTFVVAVKQDIYRFTLVKEEGGRERKVEGEGGGKAGYRLVKGGPDRVFSSPPSRPPSSPPSRPRAGIAAAAGKEEKMMAMVGGQEEREEEEDDEVNNIVGVTLTEDGTVVVASKGGNVTALRADSSSISSSSSGANFGMGTLTPVSYLPLSHFVASPSPIHISNSIAVHKQGIYIVTQEEVARIDIDPPTARLDFRWSRRYGREGLPWYTSRLGPGSGSTPSLTTCRGRDMVVLTDGELEMNLIYLDAETGEEVARSPVDFGEGVDAARLTSEQSVAVRGCQAFVVNNYVGTEGLDEDTHCTDAPVPALREGLADFCNLIQPTFIRKVCPAVFGCMGYGAAMYSLEEGK--LARVWARDDVSCGTSIPLISDPTDGSPSTTYCVGMPRNETRWTLLAFDTDTGADQFQFPFYPEGKDRVANFFANPYYAGVEAVSPHMLAIGSIGGLNYITPV-HASLLHA-PSSFAPSSSITSASSST-----------SSGSAVALA--VVGLGVMMALVVRGSRRWR---GQGREQEKEEED--VAGYVPL 743
            +W LD S+WPIVHGSRESLD T L TPL AALH YNSQGL+PS+   +S +     +             V  +KGE+EE  VY++V+ AMR  LL   +E+  +  E  I   +RK  K+  FSMANANPVSIITE+VNE EQRLWTSGF +V+VFRQV G P LELLAEYEHGGFDFHYHGSYSFVAK K E    EG  EG                    EGGR     GEG         +G P  +     +R           G     GK E       G E+  EE DDE N+IVGVTLTEDGTVVVA+KGGNVTALR  + S+++S+  A  G   L PV+Y PLS  VAS +PIHISNS+AVH QG+YIVTQEE+ R+D+D  +A L FRW+  YGR GLPWYTSRLGPGSGSTPSLT+C+GRDMVV+TDGEL MNLIYLDAETG          GEG               GC+AFVVNNYVGT+GLD DT CTDAP    +E LA FCN++QPTFI KVCPAVFGCM YGAAMY+L+E +  L ++WARDDVSCGTSIPLIS P+DGSPS+TYCVGM RN +RWTLLA DT+TG ++F+FP+Y EGKDRVANFF NPYYAGVEAV+P  LA+GSIGGL Y+TP    S LH+ PS+ A S+S   AS++            +S  A+ L   V+GL + + L+VR   R +   G+ R +  E ED    GY+PL
Sbjct:   44 EWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEG-----------VDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKR--FSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELLAEYEHGGFDFHYHGSYSFVAKSKPESS--EGGREGGG-----------------REGGR-----GEGS--------RGKPVHICGCGEARHLHLYID----GKGRRGGKPEGEDLREDGAEDGAEE-DDESNSIVGVTLTEDGTVVVAAKGGNVTALR-HNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETG----------GEG---------------GCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQPTFISKVCPAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTPTGPTSRLHSPPSAVASSASARPASAARVRESRARGVDGNSIQALGLVGIVMGLVLSLGLLVRAWHRAKQNEGRARRRAVEGEDGLGGGYLPL 716

The following BLAST results are available for this feature:

BLAST of NO15G03120.1 vs.

BLAST of NO15G03120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22288.1	1.400e-187	55.01	Stress-induced protein SRP1/TIP1 [Nannochloropsis ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G03120	NO15G03120	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03120.1	NO15G03120.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03120.1.cds1	NO15G03120.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds2	NO15G03120.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds3	NO15G03120.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds4	NO15G03120.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds5	NO15G03120.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds6	NO15G03120.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds7	NO15G03120.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds8	NO15G03120.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds9	NO15G03120.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds10	NO15G03120.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03120.1.cds11	NO15G03120.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:867137..872005-
coding sequence from alignment at chr15:867137..872005-

mRNA sequence

>NO15G03120.1 ID=NO15G03120.1|Name=NO15G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2822bp
AAAACACAGCTACGACAAGCAAAACCATGGCAGCAGCATCACTACCGACA
ATAGCTCTTCAATCCGACCCACAGCAGCCCCAGTGGGGCTTGGACGGCTC
CGCCTGGCCCATCGTGCATGGCTCACGGGAATCCTTGGACAACACCCAAC
TCGCCACCCCCCTTGATGCGGCCTTGCATCTCTACAACTCCCAAGGCTTG
ACGCCTTCCTCGACTGTGGAGGCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCAATGGCGTCTTACCATGCTCTTGTTGGTACGA
GGAAAGGCGAGGATGAAGAGGTCTACCAACAGGTCCTTGCCGCCATGCGC
CGCTTCCTCCTCCTAGGTGCGAAGGAGGAGAAGAAAGGGGAGGAAGGAGG
AATAGAGGAGGCCGTGCGAAAGCTGGACAAGAAGATCACATTTTCAATGG
CGAACGCGAACCCGGTGTCGATCATCACGGAGCAGGTGAATGAGACGGAG
CAGCGGTTGTGGACGAGTGGGTTTGGGAACGTTATGGTCTTCCGGCAGGT
TCAGGGGGAGCCAGAGCTGGAGCTGCTGGCCGAATACGAACACGGTGGCT
TCGATTTTCACTATCACGGCTCGTACTCCTTCGTGGCCAAGCAGAAGCAA
GAGGGGGGGGGGGAGGAAGGGATGGAGGAAGGCCCCTCGACCTTCGTTGT
GGCTGTGAAGCAAGATATCTATCGTTTTACATTGGTAAAGGAGGAGGGAG
GGAGGGAGAGAAAGGTAGAGGGGGAGGGGGGGGGAAAGGCTGGCTATCGC
CTGGTAAAGGGAGGGCCGGACCGCGTCTTCTCTTCTCCTCCTTCCCGTCC
TCCCTCCAGTCCTCCCTCCCGTCCTCGGGCTGGTATCGCTGCAGCGGCAG
GGAAAGAGGAGAAGATGATGGCGATGGTGGGAGGACAGGAGGAAAGAGAG
GAAGAGGAGGATGACGAGGTGAACAACATAGTGGGCGTGACGCTGACGGA
GGACGGGACGGTGGTTGTAGCGTCCAAGGGTGGAAATGTCACGGCCCTCC
GAGCCGACTCCTCCTCCATTTCCTCCTCCTCCTCCGGCGCAAACTTCGGC
ATGGGCACCCTAACGCCCGTCTCCTACCTCCCCCTGTCCCACTTCGTCGC
CTCCCCCTCACCCATCCACATCTCCAACTCCATCGCAGTGCACAAGCAGG
GCATCTACATCGTCACGCAAGAGGAGGTGGCTCGCATTGACATCGATCCT
CCAACGGCCCGCTTGGATTTCCGATGGTCGCGTCGCTATGGTCGAGAAGG
GCTGCCGTGGTATACGTCGCGTTTAGGCCCGGGCAGTGGCTCCACACCCT
CCCTCACCACCTGCCGAGGACGGGACATGGTGGTGCTGACGGACGGGGAG
CTGGAGATGAACCTCATTTACCTGGATGCAGAGACAGGCGAGGAAGTAGC
CCGAAGCCCTGTGGATTTCGGGGAGGGAGTGGACGCCGCTCGACTGACCT
CCGAGCAGTCCGTGGCAGTGCGAGGCTGTCAGGCGTTTGTGGTCAACAAT
TACGTGGGGACGGAGGGCCTGGACGAGGACACGCACTGCACGGATGCCCC
TGTGCCTGCTCTCAGGGAGGGGCTGGCGGATTTTTGCAATCTGATCCAGC
CCACATTTATTCGTAAGGTCTGCCCGGCCGTCTTCGGCTGCATGGGCTAC
GGCGCCGCTATGTACTCGTTGGAGGAGGGCAAATTGGCGCGAGTGTGGGC
GAGGGACGACGTGAGCTGTGGCACTTCCATCCCCCTGATCAGTGACCCAA
CCGACGGCAGCCCCTCCACCACCTACTGCGTGGGCATGCCCCGCAACGAG
ACGCGTTGGACGCTCCTGGCCTTCGACACGGACACGGGCGCGGACCAATT
TCAATTTCCATTTTATCCCGAGGGGAAGGACCGTGTGGCCAACTTCTTTG
CGAATCCGTACTATGCGGGCGTGGAAGCCGTGAGCCCCCACATGCTCGCC
ATCGGCTCCATTGGAGGACTCAACTACATCACTCCTGTCCATGCTTCCCT
CCTCCATGCCCCTTCCTCCTTCGCTCCCTCCTCCTCCATCACCAGCGCCA
GCAGCAGCACTAGCAGTGGCAGTGCGGTCGCGCTAGCCGTCGTGGGGCTG
GGCGTGATGATGGCCCTGGTGGTGCGAGGGAGCAGGAGGTGGAGGGGGCA
GGGCAGGGAGCAGGAGAAGGAGGAGGAGGATGTGGCGGGCTACGTGCCAT
TGTAAAGGTCATACAGAGCAATCTTTCGGGAGGGGAAGGAAAGAAGGGAA
GGAAGAAAGGAGAGAGGGAGGGAGACAGGGAGGCATTGGACGGAGGTCAA
TGACCAGTGCATTGAAAGAGGATGACGATAGAGGGAGCAGAAGAAAGGTA
CAGAGTTGCGCGAAGAGGGGATCAAGCAGGGTGAGAGGCCAAGAGGTGAC
CAAACGACATGGGCCATCGTCGAAGGGCGCCACCCGGGCGAAAGGGGATA
GGATATATGAAAGATGGAATGCGTCACTAATCAAGGTGATTAAGAAGATG
TCACAACTCCAAGATATTGCCATTTTGCATGAGAAATTAGAATACGTTGG
TGGCGCATAAGGACACATTGCTCCAAGCACAGCAATTCATCTGTTGGGGG
TCGGGGCACCGGTCTCAGCAGTCGAACGAAAAACGAGAAAAGAAGCAGTA
TGAAGGAGATTGCTGGCATACTCTGTATTCCGAAATGAAATAAGGACTTT
TCCCCTCTATGCGACTGAGACTAACAACCTCCTCCCCTCAAAGTCATGAA
GGAGTAAGCTCCAGCCAGTTGC

protein sequence of NO15G03120.1

>NO15G03120.1-protein ID=NO15G03120.1-protein|Name=NO15G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=743bp
MAAASLPTIALQSDPQQPQWGLDGSAWPIVHGSRESLDNTQLATPLDAAL
HLYNSQGLTPSSTVEASSSSSSSSSSSSSSSMASYHALVGTRKGEDEEVY
QQVLAAMRRFLLLGAKEEKKGEEGGIEEAVRKLDKKITFSMANANPVSII
TEQVNETEQRLWTSGFGNVMVFRQVQGEPELELLAEYEHGGFDFHYHGSY
SFVAKQKQEGGGEEGMEEGPSTFVVAVKQDIYRFTLVKEEGGRERKVEGE
GGGKAGYRLVKGGPDRVFSSPPSRPPSSPPSRPRAGIAAAAGKEEKMMAM
VGGQEEREEEEDDEVNNIVGVTLTEDGTVVVASKGGNVTALRADSSSISS
SSSGANFGMGTLTPVSYLPLSHFVASPSPIHISNSIAVHKQGIYIVTQEE
VARIDIDPPTARLDFRWSRRYGREGLPWYTSRLGPGSGSTPSLTTCRGRD
MVVLTDGELEMNLIYLDAETGEEVARSPVDFGEGVDAARLTSEQSVAVRG
CQAFVVNNYVGTEGLDEDTHCTDAPVPALREGLADFCNLIQPTFIRKVCP
AVFGCMGYGAAMYSLEEGKLARVWARDDVSCGTSIPLISDPTDGSPSTTY
CVGMPRNETRWTLLAFDTDTGADQFQFPFYPEGKDRVANFFANPYYAGVE
AVSPHMLAIGSIGGLNYITPVHASLLHAPSSFAPSSSITSASSSTSSGSA
VALAVVGLGVMMALVVRGSRRWRGQGREQEKEEEDVAGYVPL*

mRNA from alignment at chr15:867137..872005-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G03120.1 ID=NO15G03120.1|Name=NO15G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=4869bp|location=Sequence derived from alignment at chr15:867137..872005- (Nannochloropsis oceanica)
AAAACACAGCTACGACAAGCAAAACCATGGCAGCAGCATCACTACCGACA
ATAGCTCTTCAATCCGACCCACAGCAGCCCCAGTGGGGCTTGGACGGCTC
CGCCTGGCCCATCGTGCATGGCTCACGGGAATCCTTGGACAACACCCAAC
TCGCCACCCCCCTTGATGCGGCCTTGCATCTCTACAACTCCCAAGGCTTG
ACGCCTTCCTCGACTGTGGAGGCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCAATGGCGTCTTACCATGCTCTTGTTGGTACGA
GGAAAGGCGAGGATGAAGAGGTCTACCAACAGGTCCTTGCCGCCATGCGC
CGCTTCCTCCTCCTAGGTGCGAAGGAGGAGAAGAAAGGGGAGGAAGGAGG
AATAGAGGAGGCCGTGCGAAAGCTGGACAAGAAGATCACATTTTCAATGG
CGAACGCGAACCCGGTGTCGATCATCACGGAGCAGGTGAATGAGACGGAG
CAGCGGTTGTGGACGAGTGGGTTTGGGAACGTTATGGTCTTCCGGCAGGT
TCAGGGGGAGCCAGAGCTGGAGGTGAGGAGGGAGGGAGGGAGAGAGAGAG
GGAAAGAGCGAAAGTAGTGGAGGGAGCACCGACAGCGACTTGGTTGATGT
CGCTCACTTCAAATCAGCAGCCAAACAGGAACATCAATTACTTCTTCTTT
TGTGCTATCTCCTACATATATTACATATACCCTTGATCTCACCCCCATCC
AACCCCTTCCTCGCCCCCTTCCTCGCCCCCTTCCTCCCTCCATCCTTTCC
TCCTTCAAGCTGCTGGCCGAATACGAACACGGTGGCTTCGATTTTCACTA
TCACGGCTCGTACTCCTTCGTGGCCAAGCAGAAGCAAGAGGGGGGGGGGG
AGGAAGGGATGGAGGAAGGCCCCTCGACCTTCGTTGTGGCTGTGAAGCAA
GATATCTATCGTTTTACATTGGTAAAGGAGGAGGGAGGGAGGGAGAGAAA
GGTAGAGGGGGAGGGGGGGGGAAAGGCTGGCTATCGCCTGGTAAAGGGAG
GGCCGGACCGCGTCTTCTCTTCTCCTCCTTCCCGTCCTCCCTCCAGTCCT
CCCTCCCGTCCTCGGGCTGGTATCGCTGCAGCGGCAGGGAAAGAGGAGAA
GATGATGGCGATGGTGGGAGGACAGGAGGAAAGAGAGGAAGAGGAGGATG
ACGAGGTGAACAACATAGTGGGCGTGACGCTGACGGAGGACGGGACGGTG
GTTGTAGCGTCCAAGGTGAGGGAGGGAAGGAGGGAGGGAGGGAGGACAAG
TCCCCGCCGAGGAATTTGCACCACTAATGCCGTAATGCCGTGCGGCTTAT
GCTTCCCTCCCTCCCTCGTTCCCTCCCTCCCTCCCCCTCCTCCCCTTTCC
AACCTCCGTCAGGGTGGAAATGTCACGGCCCTCCGAGCCGACTCCTCCTC
CATTTCCTCCTCCTCCTCCGGCGCAAACTTCGGCATGGGCACCCTAACGC
CCGTCTCCTACCTCCCCCTGTCCCACTTCGTCGCCTCCCCCTCACCCATC
CACATCTCCAACTCCATCGCAGTGCACAAGCAGGTCCGAAAAAACGAAGC
TCATCCACCCTCTCTCCCTCCCTCCCCCCCCTCCCTCTTTGTCCGCTCCC
TCACCTTCGAGGAGCGGCATTTCGATCTCCCCAGCCCAACCATCTTCCCT
CCCTCCCTCCTTTTGTCCTCCCTCTCCTCCCTTCCTCTTAGGGCATCTAC
ATCGTCACGCAAGAGGAGGTGGCTCGCATTGACATCGATCCTCCAACGGC
CCGCTTGGATTTCCGATGGTCGCGTCGCTATGGTCGAGAAGGGCTGCCGG
TAGGGAGGGAGGGAAGGAGGAAGGGAGGGAAGGAGGGAGGAAGGGAAGGA
GGATTTGACCGTAACTTGTCATTTGCTTGCAGCACCTTTTTCATACCGCC
CTCCCTTCCTCCCTCCCCCCCCTCCTCCAGTGGTATACGTCGCGTTTAGG
CCCGGGCAGTGGCTCCACACCCTCCCTCACCACCTGCCGAGGACGGGACA
TGGTGGTGCTGACGGACGGGGAGCTGGAGATGAACCTCATTTACCTGGAT
GCAGAGACAGGTGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGGGGTTGATGGGCCTGCCGAGGGCAAGACAATGGGTGGCCGGA
TGGGCACTAGCCTCATCTGTCTGGATGCAGAAATTCAAGAAAACCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCTCAACC
CAAGACGCTGGCCCACAGCGTATCTCACCTCTCCCTTCGCCCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCATCCCTACCTCTCCTCTAGGCGAGGAAGT
AGCCCGAAGCCCTGTGGATTTCGGGGAGGGAGTGGACGCCGCTCGACTGA
CCTCCGAGCAGTCCGTGGCAGTGCGAGGGTAAGGCGGGAGGGAGGGAGAG
AGGGAGGGAGGGAGGGAGGGCTGTGTGCTTAAAAAGGTGGGCATGGACAA
AGCGAGTCGATGGAGCGACATGGCGGTCCACAAGAGGGGCAGCAGAGCAC
GAGGAGTAGTGAGACTGACTCCGTGCATCCTCTTACCTCCTCCCTCCCTC
CCTCCCTCTCTCCCTCCTCCCCTCCCCTTCTTCCCAGCTGTCAGGCGTTT
GTGGTCAACAATTACGTGGGGACGGAGGGCCTGGACGAGGACACGCACTG
CACGGATGCCCCTGTGCCTGCTCTCAGGGAGGGGCTGGCGGATTTTTGCA
ATGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGGGGAG
GGAAGGGCGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGGGGGAGGGAAGG
GCGGAGGGAGGGAGGGAGACGGGAAGGGAGAATCTGTCTGGCCGCCAATG
GGAAAGAAGCTTTGGAACAAACACTAATGTATTCCGCCTTCCCTCCCTCT
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCAGCTGATCCAGCCCAC
ATTTATTCGTAAGGTCTGCCCGGCCGTCTTCGGCTGCATGGGCTACGGCG
CCGCTATGTACTCGTTGGAGGTGAGGGAGGGAGGGCGGGAGGGAGGGGAG
GGAGGGAAGGAGAGAGGGAGGGAGAGAAGGGGGGAGGGAGGAGGAGGTGA
AGAGGGGCGGTTGGGAGGGAAGGGGGGAGAAAATAAGGGAGGGAGGGAGG
GAGGAGCGAGTTCTTTGTGAGTCGTGATGACCATCGTCACTCCCGTCCAT
CCTCATCACCATCTTTTTCCTCCTTCCCTTCGTTTTTCAAAATTGCCTGC
CTTCCTCCGATGGGTGAAGGAGGGCAAATTGGCGCGAGTGTGGGCGAGGG
ACGACGTGAGCTGTGGCACTTCCATCCCCCTGATCAGTGACCCAACCGAC
GGCAGGTGTGTGGGGATGGGTGCACGCCCCTCCCTTCCTCCCTCCCCCCT
TCCCTCCCTTCCTCCCTTCCCTTCCCATCACTTTCCTCCTTCCCTCCTCC
TCATTTTCTGTGCCGCATGGACTCGTCCCGAAAACCGCATTTGCCGCTCA
CCCCTCACCTGCATCGGCCTCTCGCCCTCCTTCCCTCCCTCTCAAGCCCC
TCCACCACCTACTGCGTGGGCATGCCCCGCAACGAGACGCGTTGGACGCT
CCTGGCCTTCGACACGGACACGGGCGCGGACCAATTTCAATTTCCATTTT
ATCCCGAGGGGAAGGACCGTGTGGCCAACTTCTTTGCGAATCCGGTGGGT
GGAAGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGCGAGGAAGGA
AGGGAGGGAGGGAGCGAGGAAGGGAGGAATCGCTGGCTTGAAAAATGCTT
CATGAGATGCTGCTTGCTTTCTGGCTGTCGGAATGTTACCCAGGACCGTT
CTTCACCCACTCGCATTGCTCCTTTTCTCCCTCCTTCCCCCCTCCCTTCC
CTCAGTACTATGCGGGCGTGGAAGCCGTGAGCCCCCACATGCTCGCCATC
GGCTCCATTGGAGGACTCAACTACATCACTCCTGTCCATGCTTCCCTCCT
CCATGCCCCTTCCTCCTTCGCTCCCTCCTCCTCCATCACCAGCGCCAGCA
GCAGCACTAGCAGTGGCAGTGCGGTCGCGCTAGCCGTCGTGGGGCTGGGC
GTGATGATGGCCCTGGTGGTGCGAGGGAGCAGGAGGTGGAGGGGGCAGGG
CAGGGAGCAGGAGAAGGAGGAGGAGGATGTGGCGGGCTACGTGCCATTGT
AAAGGTCATACAGAGCAATCTTTCGGGAGGGGAAGGAAAGAAGGGAAGGA
AGAAAGGAGAGAGGGAGGGAGACAGGGAGGCATTGGACGGAGGTCAATGA
CCAGTGCATTGAAAGAGGATGACGATAGAGGGAGCAGAAGAAAGGTACAG
AGTTGCGCGAAGAGGGGATCAAGCAGGGTGAGAGGCCAAGAGGTGACCAA
ACGACATGGGCCATCGTCGAAGGGCGCCACCCGGGCGAAAGGGGATAGGA
TATATGAAAGATGGAATGCGTCACTAATCAAGGTGATTAAGAAGATGTCA
CAACTCCAAGATATTGCCATTTTGCATGAGAAATTAGAATACGTTGGTGG
CGCATAAGGACACATTGCTCCAAGCACAGCAATTCATCTGTTGGGGGTCG
GGGCACCGGTCTCAGCAGTCGAACGAAAAACGAGAAAAGAAGCAGTATGA
AGGAGATTGCTGGCATACTCTGTATTCCGAAATGAAATAAGGACTTTTCC
CCTCTATGCGACTGAGACTAACAACCTCCTCCCCTCAAAGTCATGAAGGA
GTAAGCTCCAGCCAGTTGC

Coding sequence (CDS) from alignment at chr15:867137..872005-

>NO15G03120.1 ID=NO15G03120.1|Name=NO15G03120.1|organism=Nannochloropsis oceanica|type=CDS|length=2229bp|location=Sequence derived from alignment at chr15:867137..872005- (Nannochloropsis oceanica)
ATGGCAGCAGCATCACTACCGACAATAGCTCTTCAATCCGACCCACAGCA
GCCCCAGTGGGGCTTGGACGGCTCCGCCTGGCCCATCGTGCATGGCTCAC
GGGAATCCTTGGACAACACCCAACTCGCCACCCCCCTTGATGCGGCCTTG
CATCTCTACAACTCCCAAGGCTTGACGCCTTCCTCGACTGTGGAGGCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAATGGCGT
CTTACCATGCTCTTGTTGGTACGAGGAAAGGCGAGGATGAAGAGGTCTAC
CAACAGGTCCTTGCCGCCATGCGCCGCTTCCTCCTCCTAGGTGCGAAGGA
GGAGAAGAAAGGGGAGGAAGGAGGAATAGAGGAGGCCGTGCGAAAGCTGG
ACAAGAAGATCACATTTTCAATGGCGAACGCGAACCCGGTGTCGATCATC
ACGGAGCAGGTGAATGAGACGGAGCAGCGGTTGTGGACGAGTGGGTTTGG
GAACGTTATGGTCTTCCGGCAGGTTCAGGGGGAGCCAGAGCTGGAGCTGC
TGGCCGAATACGAACACGGTGGCTTCGATTTTCACTATCACGGCTCGTAC
TCCTTCGTGGCCAAGCAGAAGCAAGAGGGGGGGGGGGAGGAAGGGATGGA
GGAAGGCCCCTCGACCTTCGTTGTGGCTGTGAAGCAAGATATCTATCGTT
TTACATTGGTAAAGGAGGAGGGAGGGAGGGAGAGAAAGGTAGAGGGGGAG
GGGGGGGGAAAGGCTGGCTATCGCCTGGTAAAGGGAGGGCCGGACCGCGT
CTTCTCTTCTCCTCCTTCCCGTCCTCCCTCCAGTCCTCCCTCCCGTCCTC
GGGCTGGTATCGCTGCAGCGGCAGGGAAAGAGGAGAAGATGATGGCGATG
GTGGGAGGACAGGAGGAAAGAGAGGAAGAGGAGGATGACGAGGTGAACAA
CATAGTGGGCGTGACGCTGACGGAGGACGGGACGGTGGTTGTAGCGTCCA
AGGGTGGAAATGTCACGGCCCTCCGAGCCGACTCCTCCTCCATTTCCTCC
TCCTCCTCCGGCGCAAACTTCGGCATGGGCACCCTAACGCCCGTCTCCTA
CCTCCCCCTGTCCCACTTCGTCGCCTCCCCCTCACCCATCCACATCTCCA
ACTCCATCGCAGTGCACAAGCAGGGCATCTACATCGTCACGCAAGAGGAG
GTGGCTCGCATTGACATCGATCCTCCAACGGCCCGCTTGGATTTCCGATG
GTCGCGTCGCTATGGTCGAGAAGGGCTGCCGTGGTATACGTCGCGTTTAG
GCCCGGGCAGTGGCTCCACACCCTCCCTCACCACCTGCCGAGGACGGGAC
ATGGTGGTGCTGACGGACGGGGAGCTGGAGATGAACCTCATTTACCTGGA
TGCAGAGACAGGCGAGGAAGTAGCCCGAAGCCCTGTGGATTTCGGGGAGG
GAGTGGACGCCGCTCGACTGACCTCCGAGCAGTCCGTGGCAGTGCGAGGC
TGTCAGGCGTTTGTGGTCAACAATTACGTGGGGACGGAGGGCCTGGACGA
GGACACGCACTGCACGGATGCCCCTGTGCCTGCTCTCAGGGAGGGGCTGG
CGGATTTTTGCAATCTGATCCAGCCCACATTTATTCGTAAGGTCTGCCCG
GCCGTCTTCGGCTGCATGGGCTACGGCGCCGCTATGTACTCGTTGGAGGA
GGGCAAATTGGCGCGAGTGTGGGCGAGGGACGACGTGAGCTGTGGCACTT
CCATCCCCCTGATCAGTGACCCAACCGACGGCAGCCCCTCCACCACCTAC
TGCGTGGGCATGCCCCGCAACGAGACGCGTTGGACGCTCCTGGCCTTCGA
CACGGACACGGGCGCGGACCAATTTCAATTTCCATTTTATCCCGAGGGGA
AGGACCGTGTGGCCAACTTCTTTGCGAATCCGTACTATGCGGGCGTGGAA
GCCGTGAGCCCCCACATGCTCGCCATCGGCTCCATTGGAGGACTCAACTA
CATCACTCCTGTCCATGCTTCCCTCCTCCATGCCCCTTCCTCCTTCGCTC
CCTCCTCCTCCATCACCAGCGCCAGCAGCAGCACTAGCAGTGGCAGTGCG
GTCGCGCTAGCCGTCGTGGGGCTGGGCGTGATGATGGCCCTGGTGGTGCG
AGGGAGCAGGAGGTGGAGGGGGCAGGGCAGGGAGCAGGAGAAGGAGGAGG
AGGATGTGGCGGGCTACGTGCCATTGTAA

Synonyms

Publications