NO15G03100.3, NO15G03100.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G03100.3
Unique Name	NO15G03100.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3964
Alignment location	chr15:853283..858742 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:853283..858742 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G03100.3 vs.
Match: EWM22290.1 (dna mismatch repair protein pms2 [Nannochloropsis gaditana])

HSP 1 Score: 331.3 bits (848), Expect = 1.200e-86
Identity = 177/215 (82.33%), Postives = 188/215 (87.44%), Query Frame = 0

Query:  861 KGKKGGREDNEKESVSIAGRDTEEAARVFSRVLTKMHLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTLHEQRLIAPKPLELSAMEEVIILEHLHTFKQNGFSFLVDPEAGPMQRVKLLSLPYSKGVQFGLEDIHELASLLGDSSFGFAGADGEGAGEESGKEDRGQGGPSVRLPKIRAMFASRACRMSIMIGKALTKPQM 1076
            +G++GGR + EKESVSIAGRDTE AARVFSRVLTK HLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTLHEQRLIAPKPLELSAMEEV+ILEHL TFK NGFSF VDPEAGPM+R+KLLSLPYSKG+QFGL+DIHELASLLGDSSF          G E G E      PSVRLPKIRAMFASRACRMSIMIGKALT+ Q+
Sbjct:   14 EGREGGRANGEKESVSIAGRDTEAAARVFSRVLTKSHLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTLHEQRLIAPKPLELSAMEEVVILEHLPTFKANGFSFRVDPEAGPMERIKLLSLPYSKGIQFGLQDIHELASLLGDSSF--------CGGVEEGAEG---PAPSVRLPKIRAMFASRACRMSIMIGKALTRSQV 217

The following BLAST results are available for this feature:

BLAST of NO15G03100.3 vs.

BLAST of NO15G03100.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22290.1	1.200e-86	82.33	dna mismatch repair protein pms2 [Nannochloropsis ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G03100	NO15G03100	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03100.3	NO15G03100.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03100.3.cds1	NO15G03100.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds2	NO15G03100.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds3	NO15G03100.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds4	NO15G03100.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds5	NO15G03100.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds6	NO15G03100.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds7	NO15G03100.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds8	NO15G03100.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds9	NO15G03100.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds10	NO15G03100.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds11	NO15G03100.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03100.3.cds12	NO15G03100.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:853283..858742-
coding sequence from alignment at chr15:853283..858742-

mRNA sequence

>NO15G03100.3 ID=NO15G03100.3|Name=NO15G03100.3|organism=Nannochloropsis oceanica|type=mRNA|length=3964bp
CAACCACCCAAATACCTCCATTTAGACGAATCTCACGTCTGTAACATATC
GTTGACCAAGATTGAGGCTATGATTGCCCGGTGTCTTTGAGTTTAGGGCA
TCTTTTAAGCAGCAGCGCGAGCTCGACCGTTTCCAGTCTTGCTCACTTCT
TTTTCCGTCGGCGAGCAGGGGGGAAGTGGGGGGCACACATCTCCCTCCAA
TACAAGCCTCTCACTAACCCTTATCCCCATAACGCACAACAGGGAAGATG
ATGGAGGCCTTTGCCGCTGATGTGGATGATGACGTGATTCCATCATCGCT
GACCGCGGGCGTGGTGGCACGGGACACAGAGAAAGAGGAGAGGGGAACGG
AGCGGGGAGGAGATGGCGAGGAGCAAGGCGTCGACCAGGAAAAGCACTAC
CATCAGCGTGCCGCACCTGAAATTAAGGCTATAGACCGCTCATCCGTGGC
ACGGATCTGTTCGGGACAGGTCGTCATCGACCTCGCGACAGCAGTCAAGG
AGCTTGTAGAGAATGCACTAGATGCTGGGGCCAGACAGGTGACAATGATA
GATGCATGTGTCCTCCCTTCTCGTCCATTTCATTACATATTTTTCTATCC
CCTCCATTTGCTTCCTACTCCCGCTCCCGCTCCATGAACAGGTGGAGGTA
AAGCTCAGAGACTGGGGCTTAGAGCTCATTGAGGTATCGGATAATGGTAG
CGGTATCGCCCCCAAAAATTACCAAGCCCTCACGCTCAAGTACCACACCA
GCAAATTGTCGTCCTTTACAGATTTGCAGTCTGTCGTCTCTTTTGGATTC
AGGGGCGAGGCCTTGTCTTCGTTGTGTGAGATTGCTGGGGGGTTCGAAGT
GACGACAAGGGTGGAGGATGAGTCGATTGGAGCCAGAATCGTCTACGGCC
GCACGGGCGCCATCTGCTCACAGACCCCCATGGCCAGACAGCCAGGTACC
ACTATCACCGTTTTCCGTCTTTTTGAGCCGCTCCCGGTCCGACGGGCCGA
ATTCAAGCGCACCGTCCCGAAGCAGTCGGCGAGGCTTCTGCGCGTCCTCC
AAGCTTACGCCTTGGTCGCCACGGGCGTCCGTATCACCTGCTCGAACATT
AAGGGAGCCAAAGGAAACAGGCAGCAGCTCCTCGGAACGCAAGGGAGCCC
CTCCATCCGCGACAACGTTGTGTCCATCTTCGGCGCGGCGTTTGCTTCGT
CTCTCTTGCCGTTGCACTTGGAAGTGGAAGTGGAGGGAGGACGGAAAGGA
GGGGAAGGAGGGGGAGGCGAGGAGGAGGAGAAGGGCGAGGAGGAGGAGGA
GGAAGCGGTCACCAAAATCGTGGGCTTGGTTTCAAAGGCAGGTGAAGGCG
TGGGCCGCAGCGACAATGATCGACAGTTCATCTTTCTTAACTCCCGGCCC
GTGGACTTGCCGCGGGTGACACGGGTGTTGAATGAGGTGTGGCGACAGTA
CGAGATGAAGCACAAACCAGCAGTGATCCTCAACATCCAGGCACCTCCGG
GCACCTTTGACGTGAATGTCACCCCAGACAAACGCGAGATATTTCTGACT
CAAGAGGCTCTGTTGCTGGTCAAGCTCAAAGAGAAGCTCCAGTCCATGTG
GGGGATTCACGACCATCAGAGGACGTTTCAGGTGGCCGGTGGACAGGGCA
ACAAGGCGGCAAAAGCTCTCGCTGTATCTCTCTCGATGAAAAACGCTGGT
GGTGGTAGTGATGGTGGTGGGGGCGCTGCTGCTGCTGCTGCTGCTGCTGC
TACTGGTGAGGGTGTTGCCAAGGGGCTGGTGGAGGAGGGAAAAAGCATGG
AGGCCGTGGAAGAGGAGGAGGCGGCGAGGGAGGAGGGGGAAGGAGGAGAG
GAAGAAGCTTTCGTTGCTTCAGCTGCTGCTGTTACTCCCACTTTAGCACC
GCGGAAGGAAAGAGAGGCGGAGCATAGTGAGGAGGGAAGAATGGAGGAGG
ACACGGCGGAGGAATATGAGGACGAGGTGGAACTTGAGGAAGAGGAAGGA
GGAAGTGGCATTTCCTCCCTGCCTTCCGTCCTTTGCAGGGGCAGGCGGCA
CCGCAACAGCGACATGGATAGCCATCCTAGATCTACAGACCCTTGCAAGC
CCTCTCCGTCCTCTTCATCACTCCTCCGTACTAATGCTGGGGGCAGCGCT
GATGGTGGTGGAGGGGGGACGAGAGGAGGAGAAGGAGGAAGAGGAGGAGG
GAGAGGAGAAGGACGAGGAGGCGGAGGAGGAGGAGGAGGAGAAGGAGGAG
GTTGGAGTGGGAGAATGCGAGGGAGGGGGGGAGCGGGGGGGGGATCTACC
GGTCTCATCACACGTTTCCTCGCTCGGAACAATGTGGATGTCAAAATCAA
CGTCCCTCCCCCCTCTTCCTATGTGCTCACTTCTCCCCCTCCCTCCCCCT
CTTCCTCCTCCTCGCCCTCCCCTCCTCCTCCGCCTCTGCCTCGTGATAGG
ATTCATCGGAAATTGAACGCGTTTCTGGCGCCTTCGTTTTCTCGGCGACA
AGAAGGGGAGGGAGGGAGGGATGAAGAGGAGGAGGATAATTGGGATACGG
AAAACAGAGAGGATGAAGAGGAAGAGAAAGAGGAGGAGGAGGAGGTGATG
GAGGAGGAGGGGGAGGTGGAGGAGGAAAGGGAGGAGGACGAGCAGGAGGA
GGAGGAAATGGAAGAAGAGGAGGAAGAAGAGGGAGAAGCCTTGTCTGTGG
GTCAGACTGCATCCCTACCTCCTTCTCCTCTTCCCAAGCGCGCTCGACGA
GAGGGCGCGGTAAGAGAAAAGGTGGAGGGAAGGAGGGAGGGAGGGAGGGG
TGGAGGGGTGTGTGCCTGCTCACATACCCTACCCCCGACGGCGATGCTCG
TGGATGAGGGAGAGGGTGAGGAGGAAGGAGTGAAGGAGGAAGGGAAAGAG
GGAGGGGTGGATGAGGGAGTGCTTACACCGGCGGGGAAGGGGCTGGGGGG
GTTAATGCTGCCAGGGATGGATGGAGAGACGCAGCTGCGGAAGGAGAAGA
AGGAGAGTGGGGAGATGAAGAGACCATTTGTTTTTGACGTCTCCAAGGCA
TTGGGCCGGGCAAGGAGGGGGAGGAGGGAGGGAGAGGGAGGGAAGGCGAT
GGCGTCGGTGTTGTCCTCGGCAACATGGGCCAAGGGCAAGAAGGGAGGGC
GAGAGGACAATGAAAAGGAGAGTGTGTCGATCGCCGGAAGGGATACAGAG
GAGGCGGCTAGGGTTTTCTCTCGCGTGTTGACCAAAATGCACTTGAAACG
CTTGGTGGTACTGGGGCAGTTCAACCTGGGCTTTATCATTGCTCGAATTG
GCGCCGATGTGTTCATTCTGGATCAGCACGCCTGCGACGAAAAGTATAAC
TTTGAGACACTGCAGTCCACGACTACCCTCCATGAGCAGCGCCTCATTGC
ACCCAAGCCTCTCGAATTGAGTGCCATGGAGGAAGTCATCATTCTCGAGC
ACCTCCACACCTTCAAACAGAATGGCTTCTCCTTTCTCGTCGACCCGGAG
GCAGGGCCCATGCAGAGGGTGAAACTCCTCTCCCTTCCTTACAGTAAAGG
CGTCCAATTTGGCTTGGAAGACATCCATGAACTCGCCTCCCTTCTCGGAG
ATTCCTCGTTTGGCTTTGCCGGTGCCGATGGTGAGGGGGCAGGGGAGGAG
AGCGGGAAGGAGGATAGAGGGCAAGGCGGGCCCTCAGTGCGGCTGCCGAA
GATTAGGGCCATGTTTGCATCCAGGGCGTGTCGGATGTCGATTATGATTG
GAAAGGCCTTGACCAAGCCGCAGATGCAGAAGGTGGTGTCAAATTTGGCC
GAGATTGAGCAACCCTGGAACTGTCCTCACGGACGACCCACCATGCGACA
CCTGGTGGACCTGACGACGCTGCAAGGAGGAGAAGGGATCTAATTAGAGA
GCGTATATGACGAATTTGACATAGCACAAAGAAGCGATTTCTGGCCCTGT
GCCTCAACATGATA

protein sequence of NO15G03100.3

>NO15G03100.3-protein ID=NO15G03100.3-protein|Name=NO15G03100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1114bp
MHVSSLLVHFITYFSIPSICFLLPLPLHEQVEVKLRDWGLELIEVSDNGS
GIAPKNYQALTLKYHTSKLSSFTDLQSVVSFGFRGEALSSLCEIAGGFEV
TTRVEDESIGARIVYGRTGAICSQTPMARQPGTTITVFRLFEPLPVRRAE
FKRTVPKQSARLLRVLQAYALVATGVRITCSNIKGAKGNRQQLLGTQGSP
SIRDNVVSIFGAAFASSLLPLHLEVEVEGGRKGGEGGGGEEEEKGEEEEE
EAVTKIVGLVSKAGEGVGRSDNDRQFIFLNSRPVDLPRVTRVLNEVWRQY
EMKHKPAVILNIQAPPGTFDVNVTPDKREIFLTQEALLLVKLKEKLQSMW
GIHDHQRTFQVAGGQGNKAAKALAVSLSMKNAGGGSDGGGGAAAAAAAAA
TGEGVAKGLVEEGKSMEAVEEEEAAREEGEGGEEEAFVASAAAVTPTLAP
RKEREAEHSEEGRMEEDTAEEYEDEVELEEEEGGSGISSLPSVLCRGRRH
RNSDMDSHPRSTDPCKPSPSSSSLLRTNAGGSADGGGGGTRGGEGGRGGG
RGEGRGGGGGGGGEGGGWSGRMRGRGGAGGGSTGLITRFLARNNVDVKIN
VPPPSSYVLTSPPPSPSSSSSPSPPPPPLPRDRIHRKLNAFLAPSFSRRQ
EGEGGRDEEEEDNWDTENREDEEEEKEEEEEVMEEEGEVEEEREEDEQEE
EEMEEEEEEEGEALSVGQTASLPPSPLPKRARREGAVREKVEGRREGGRG
GGVCACSHTLPPTAMLVDEGEGEEEGVKEEGKEGGVDEGVLTPAGKGLGG
LMLPGMDGETQLRKEKKESGEMKRPFVFDVSKALGRARRGRREGEGGKAM
ASVLSSATWAKGKKGGREDNEKESVSIAGRDTEEAARVFSRVLTKMHLKR
LVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTLHEQRLIA
PKPLELSAMEEVIILEHLHTFKQNGFSFLVDPEAGPMQRVKLLSLPYSKG
VQFGLEDIHELASLLGDSSFGFAGADGEGAGEESGKEDRGQGGPSVRLPK
IRAMFASRACRMSIMIGKALTKPQMQKVVSNLAEIEQPWNCPHGRPTMRH
LVDLTTLQGGEGI*

mRNA from alignment at chr15:853283..858742-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G03100.3 ID=NO15G03100.3|Name=NO15G03100.3|organism=Nannochloropsis oceanica|type=mRNA|length=5460bp|location=Sequence derived from alignment at chr15:853283..858742- (Nannochloropsis oceanica)
CAACCACCCAAATACCTCCATTTAGACGAATCTCACGTCTGTAACATATC
GTTGACCAAGATTGAGGCTATGATTGCCCGGTGTCTTTGAGTTTAGGGCA
TCTTTTAAGCAGCAGCGCGAGCTCGACCGTTTCCAGTCTTGCTCACTTCT
TTTTCCGTCGGCGAGCAGGGGGGAAGTGGGGGGCACACATCTCCCTCCAA
TACAAGCCTCTCACTAACCCTTATCCCCATAACGCACAACAGGGAAGATG
ATGGAGGCCTTTGCCGCTGATGTGGATGATGACGTGATTCCATCATCGCT
GACCGCGGGCGTGGTGGCACGGGACACAGAGAAAGAGGAGAGGGGAACGG
AGCGGGGAGGAGATGGCGAGGAGCAAGGCGTCGACCAGGAAAAGCACTAC
CATCAGCGTGCCGCACCTGAAATTAAGGCTATAGACCGCTCATCCGTGGC
ACGGATCTGTTCGGGACAGGTATATTTTGTTGGTTTGTTCGCTGTTGCCT
TGCTCAACGCCCCAAGCCTCACTCCCACCCTTTCCTCCTCCCCCCTCCCA
TTTGTTGCCCACTACCAGGTCGTCATCGACCTCGCGACAGCAGTCAAGGA
GCTTGTAGAGAATGCACTAGATGCTGGGGCCAGACAGGTGACAATGATAG
ATGCATGTGTCCTCCCTTCTCGTCCATTTCATTACATATTTTTCTATCCC
CTCCATTTGCTTCCTACTCCCGCTCCCGCTCCATGAACAGGTGGAGGTAA
AGCTCAGAGACTGGGGCTTAGAGCTCATTGAGGTATCGGATAATGGTAGC
GGTATCGCCCCCAAAAATTACCAAGTACGTACGTGGTTGCAAACCAGGAA
AAGGGAGAGGGAAGCGGAGGGAAAGCGGGAGGAGGGCTGGGCGACGGTTT
GACTCTTCCTAACTGCTCCCCCTTCCTCATTTCCACAGGCCCTCACGCTC
AAGTACCACACCAGCAAATTGTCGTCCTTTACAGATTTGCAGTCTGTCGT
CTCTTTTGGATTCAGGGGCGAGGCCTTGTCTTCGTTGTGTGAGATTGCTG
GGGGGTTCGAAGTGACGACAAGGGTGGAGGATGAGTCGATTGGAGCCAGA
ATCGTCTACGGCCGGTGAGGAGGGAGGGTGGGAGGGAGAGGAGGGAGGAA
ATTAATAAAAAGAAAATACAGAGGGCAGGCGGATCATGGTGCGGCCTCTC
AATTTCTTAAATCCGTCCTCCCTTTTTTTCTCCCTTCCCCACATTTCCCC
TGGACACGCGGACTATACCTCCAGCACGGGCGCCATCTGCTCACAGACCC
CCATGGCCAGACAGCCAGGTACCACTATCACCGTTTTCCGTCTTTTTGAG
CCGCTCCCGGTCCGACGGGCCGAATTCAAGCGGTAAGAGGCGGAGGAGGG
AGGGAGGGATGGAGGGAAGGAAGGAAACGACACGATCGTGTGTACTTGTC
ACCTTTGCAGCCGATCCTTGTAATCCATATTCATCCAAACCTCCCTCTCT
TCCTCCCTCCCTCCCTCTCTCCTTTCCTCCCTCAGCACCGTCCCGAAGCA
GTCGGCGAGGCTTCTGCGCGTCCTCCAAGCTTACGCCTTGGTCGCCACGG
GCGTCCGTATCACCTGCTCGAACATTAAGGGAGCCAAAGGAAACAGGTCC
ACCCATCAGCCCCTCCCCCCCTCCCTCCTTCTTTTCCTTCCTCTGCGGGT
AGCCGGGCGCCGTCTCATGCCATCATCCTCTCTCCCTCCCTCCCTCCCTT
CCTCCCCCCCTCCCTCCTTCTCTCTCCAGGCAGCAGCTCCTCGGAACGCA
AGGGAGCCCCTCCATCCGCGACAACGTTGTGTCCATCTTCGGCGCGGCGT
TTGCTTCGTCTCTCTTGCCGTTGCACTTGGAAGTGGAAGTGGAGGGAGGA
CGGAAAGGAGGGGAAGGAGGGGGAGGCGAGGAGGAGGAGAAGGGCGAGGA
GGAGGAGGAGGAAGCGGTCACCAAAATCGTGGGCTTGGTTTCAAAGGTTC
GTTCCTTTTTCTCCCTGTGCAAGATCTTCACGCACTTTTGTGACACCACC
CTCTCTCCTTCCCTCTCTGCCTCCCTCCAGGCAGGTGAAGGCGTGGGCCG
CAGCGACAATGATCGACAGTTCATCTTTCTTAACTCCCGGCCCGTGGACT
TGCCGCGGGTGACACGGGTGTTGAATGAGGTGGGAGGGAGAGGGATGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTGTCCTGTTCAAGCATGC
ACGGCTCCATAATTGCTTAGTCGTTCGTTTGAAACCACGGACAGGTGTGG
CGACAGTACGAGATGAAGCACAAACCAGCAGTGATCCTCAACATCCAGGC
ACCTCCGGGTAGGTTCTCCTCCCCCCCCCCCCTGCCCTCCCTTCTTCCGT
TCCTTCAGTCCTCCTCTTCACTCATCCAACCCTCCCTTCCTCCCTCACTT
CCTCCCTCTCTTCCTCAGGCACCTTTGACGTGAATGTCACCCCAGACAAA
CGCGAGATATTTCTGACTCAAGAGGCTCTGTTGCTGGTCAAGCTCAAAGA
GAAGCTCCAGTCCATGTGGGGGATTCACGACCATCAGAGGACGTTTCAGG
TAGAAAGGGAGGGAGGGAGGGAGGAAGGGCAAGCAGAGGGTGGACATAAA
CGTTGTCATTTAATATTTTTCCAAATTTGACTTTGAAATGGGATTTCCTG
ACTTGATTGCGTTGTCGTTTCCTCTTGCGCTCTATCCGACCAGGTGGCCG
GTGGACAGGGCAACAAGGCGGCAAAAGCTCTCGCTGTATCTCTCTCGATG
AAAAACGCTGGTGGTGGTAGTGATGGTGGTGGGGGCGCTGCTGCTGCTGC
TGCTGCTGCTGCTACTGGTGAGGGTGTTGCCAAGGGGCTGGTGGAGGAGG
GAAAAAGCATGGAGGCCGTGGAAGAGGAGGAGGCGGCGAGGGAGGAGGGG
GAAGGAGGAGAGGAAGAAGCTTTCGTTGCTTCAGCTGCTGCTGTTACTCC
CACTTTAGCACCGCGGAAGGAAAGAGAGGCGGAGCATAGTGAGGAGGGAA
GAATGGAGGAGGACACGGCGGAGGAATATGAGGACGAGGTGGAACTTGAG
GAAGAGGAAGGAGGAAGTGGCATTTCCTCCCTGCCTTCCGTCCTTTGCAG
GGGCAGGCGGCACCGCAACAGCGACATGGATAGCCATCCTAGATCTACAG
ACCCTTGCAAGCCCTCTCCGTCCTCTTCATCACTCCTCCGTACTAATGCT
GGGGGCAGCGCTGATGGTGGTGGAGGGGGGACGAGAGGAGGAGAAGGAGG
AAGAGGAGGAGGGAGAGGAGAAGGACGAGGAGGCGGAGGAGGAGGAGGAG
GAGAAGGAGGAGGTTGGAGTGGGAGAATGCGAGGGAGGGGGGGAGCGGGG
GGGGGATCTACCGGTCTCATCACACGTTTCCTCGCTCGGAACAATGTGGA
TGTCAAAATCAACGTCCCTCCCCCCTCTTCCTATGTGCTCACTTCTCCCC
CTCCCTCCCCCTCTTCCTCCTCCTCGCCCTCCCCTCCTCCTCCGCCTCTG
CCTCGTGATAGGATTCATCGGAAATTGAACGCGTTTCTGGCGCCTTCGTT
TTCTCGGCGACAAGAAGGGGAGGGAGGGAGGGATGAAGAGGAGGAGGATA
ATTGGGATACGGAAAACAGAGAGGATGAAGAGGAAGAGAAAGAGGAGGAG
GAGGAGGTGATGGAGGAGGAGGGGGAGGTGGAGGAGGAAAGGGAGGAGGA
CGAGCAGGAGGAGGAGGAAATGGAAGAAGAGGAGGAAGAAGAGGGAGAAG
CCTTGTCTGTGGGTCAGACTGCATCCCTACCTCCTTCTCCTCTTCCCAAG
CGCGCTCGACGAGAGGGCGCGGTAAGAGAAAAGGTGGAGGGAAGGAGGGA
GGGAGGGAGGGGTGGAGGGGTGTGTGCCTGCTCACATACCCTACCCCCGA
CGGCGATGCTCGTGGATGAGGGAGAGGGTGAGGAGGAAGGAGTGAAGGAG
GAAGGGAAAGAGGGAGGGGTGGATGAGGGAGTGCTTACACCGGCGGGGAA
GGGGCTGGGGGGGTTAATGCTGCCAGGGATGGATGGAGAGACGCAGCTGC
GGAAGGAGAAGAAGGAGAGTGGGGAGATGAAGAGACCATTTGTTTTTGAC
GTCTCCAAGGCATTGGGCCGGGCAAGGAGGGGGAGGAGGGAGGGAGAGGG
AGGGAAGGCGATGGCGTCGGTGTTGTCCTCGGCAACATGGGCCAAGGGCA
AGAAGGGAGGGCGAGAGGACAATGAAAAGGAGAGTGTGTCGATCGCCGGA
AGGGATACAGAGGAGGCGGCTAGGGTTTTCTCTCGCGTGTTGACCAAAAT
GCACTTGAAACGCTTGGTGGTACTGGGGCAGGTGAGGATGGGAAGAGGGG
GTAGGACGGGGGGCAGAAGGGAAGAAGGAAGACACCGGCACCACTCACTC
ATTGACCGACTCTTTCAACGTGTCTGATCCCTTTCTTGTAGTTCAACCTG
GGCTTTATCATTGCTCGAATTGGCGCCGATGTGTTCATTCTGGATCAGCA
CGCCTGCGACGAAAAGTATAACTTTGAGACACTGCAGGTAGGTAGGTCGG
TCGGTAGGGAGGGAGGGAGGGAGGGAGGTAGGTAGGTTGGGGATCGAAAT
ACATCCCTTTTTTGTGTCCTCACCCATTTAATCCTCCCTCTTTCCTTCAC
TCCGTCAGTCCACGACTACCCTCCATGAGCAGCGCCTCATTGCACCCAAG
CCTCTCGAATTGAGTGCCATGGAGGAAGTCATCATTCTCGAGCACCTCCA
CACCTTCAAACAGAATGGCTTCTCCTTTCTCGTCGACCCGGAGGCAGGGC
CCATGCAGAGGGTGAAACTCCTCTCCCTTCCTTACAGTAAAGGCGTCCAA
TTTGGCTTGGAAGACATCCATGAACTCGCCTCCCTTCTCGGAGATTCCTC
GTTTGGCTTTGCCGGTGCCGATGGTGAGGGGGCAGGGGAGGAGAGCGGGA
AGGAGGATAGAGGGCAAGGCGGGCCCTCAGTGCGGCTGCCGAAGATTAGG
GCCATGTTTGCATCCAGGGCGTGTCGGATGTCGATTATGATTGGAAAGGC
CTTGACCAAGCCGCAGGTAATAAAAGGGAACGAGAGAGGGAGGGTGGGAG
GGAAAGAGGGAGGGAGGTGCCGGAATGAACAAACAGAATCAGATAAATTC
CCACATTTGCTCACGTACATCGCCTGTTTTCCCTTTCCTATTTCTTCCAT
CCTTCCCCCCCCCCTCCAGATGCAGAAGGTGGTGTCAAATTTGGCCGAGA
TTGAGCAACCCTGGAACTGTCCTCACGGACGACCCACCATGCGACACCTG
GTGGACCTGACGACGCTGCAAGGAGGAGAAGGGATCTAATTAGAGAGCGT
ATATGACGAATTTGACATAGCACAAAGAAGCGATTTCTGGCCCTGTGCCT
CAACATGATA

Coding sequence (CDS) from alignment at chr15:853283..858742-

>NO15G03100.3 ID=NO15G03100.3|Name=NO15G03100.3|organism=Nannochloropsis oceanica|type=CDS|length=3342bp|location=Sequence derived from alignment at chr15:853283..858742- (Nannochloropsis oceanica)
ATGCATGTGTCCTCCCTTCTCGTCCATTTCATTACATATTTTTCTATCCC
CTCCATTTGCTTCCTACTCCCGCTCCCGCTCCATGAACAGGTGGAGGTAA
AGCTCAGAGACTGGGGCTTAGAGCTCATTGAGGTATCGGATAATGGTAGC
GGTATCGCCCCCAAAAATTACCAAGCCCTCACGCTCAAGTACCACACCAG
CAAATTGTCGTCCTTTACAGATTTGCAGTCTGTCGTCTCTTTTGGATTCA
GGGGCGAGGCCTTGTCTTCGTTGTGTGAGATTGCTGGGGGGTTCGAAGTG
ACGACAAGGGTGGAGGATGAGTCGATTGGAGCCAGAATCGTCTACGGCCG
CACGGGCGCCATCTGCTCACAGACCCCCATGGCCAGACAGCCAGGTACCA
CTATCACCGTTTTCCGTCTTTTTGAGCCGCTCCCGGTCCGACGGGCCGAA
TTCAAGCGCACCGTCCCGAAGCAGTCGGCGAGGCTTCTGCGCGTCCTCCA
AGCTTACGCCTTGGTCGCCACGGGCGTCCGTATCACCTGCTCGAACATTA
AGGGAGCCAAAGGAAACAGGCAGCAGCTCCTCGGAACGCAAGGGAGCCCC
TCCATCCGCGACAACGTTGTGTCCATCTTCGGCGCGGCGTTTGCTTCGTC
TCTCTTGCCGTTGCACTTGGAAGTGGAAGTGGAGGGAGGACGGAAAGGAG
GGGAAGGAGGGGGAGGCGAGGAGGAGGAGAAGGGCGAGGAGGAGGAGGAG
GAAGCGGTCACCAAAATCGTGGGCTTGGTTTCAAAGGCAGGTGAAGGCGT
GGGCCGCAGCGACAATGATCGACAGTTCATCTTTCTTAACTCCCGGCCCG
TGGACTTGCCGCGGGTGACACGGGTGTTGAATGAGGTGTGGCGACAGTAC
GAGATGAAGCACAAACCAGCAGTGATCCTCAACATCCAGGCACCTCCGGG
CACCTTTGACGTGAATGTCACCCCAGACAAACGCGAGATATTTCTGACTC
AAGAGGCTCTGTTGCTGGTCAAGCTCAAAGAGAAGCTCCAGTCCATGTGG
GGGATTCACGACCATCAGAGGACGTTTCAGGTGGCCGGTGGACAGGGCAA
CAAGGCGGCAAAAGCTCTCGCTGTATCTCTCTCGATGAAAAACGCTGGTG
GTGGTAGTGATGGTGGTGGGGGCGCTGCTGCTGCTGCTGCTGCTGCTGCT
ACTGGTGAGGGTGTTGCCAAGGGGCTGGTGGAGGAGGGAAAAAGCATGGA
GGCCGTGGAAGAGGAGGAGGCGGCGAGGGAGGAGGGGGAAGGAGGAGAGG
AAGAAGCTTTCGTTGCTTCAGCTGCTGCTGTTACTCCCACTTTAGCACCG
CGGAAGGAAAGAGAGGCGGAGCATAGTGAGGAGGGAAGAATGGAGGAGGA
CACGGCGGAGGAATATGAGGACGAGGTGGAACTTGAGGAAGAGGAAGGAG
GAAGTGGCATTTCCTCCCTGCCTTCCGTCCTTTGCAGGGGCAGGCGGCAC
CGCAACAGCGACATGGATAGCCATCCTAGATCTACAGACCCTTGCAAGCC
CTCTCCGTCCTCTTCATCACTCCTCCGTACTAATGCTGGGGGCAGCGCTG
ATGGTGGTGGAGGGGGGACGAGAGGAGGAGAAGGAGGAAGAGGAGGAGGG
AGAGGAGAAGGACGAGGAGGCGGAGGAGGAGGAGGAGGAGAAGGAGGAGG
TTGGAGTGGGAGAATGCGAGGGAGGGGGGGAGCGGGGGGGGGATCTACCG
GTCTCATCACACGTTTCCTCGCTCGGAACAATGTGGATGTCAAAATCAAC
GTCCCTCCCCCCTCTTCCTATGTGCTCACTTCTCCCCCTCCCTCCCCCTC
TTCCTCCTCCTCGCCCTCCCCTCCTCCTCCGCCTCTGCCTCGTGATAGGA
TTCATCGGAAATTGAACGCGTTTCTGGCGCCTTCGTTTTCTCGGCGACAA
GAAGGGGAGGGAGGGAGGGATGAAGAGGAGGAGGATAATTGGGATACGGA
AAACAGAGAGGATGAAGAGGAAGAGAAAGAGGAGGAGGAGGAGGTGATGG
AGGAGGAGGGGGAGGTGGAGGAGGAAAGGGAGGAGGACGAGCAGGAGGAG
GAGGAAATGGAAGAAGAGGAGGAAGAAGAGGGAGAAGCCTTGTCTGTGGG
TCAGACTGCATCCCTACCTCCTTCTCCTCTTCCCAAGCGCGCTCGACGAG
AGGGCGCGGTAAGAGAAAAGGTGGAGGGAAGGAGGGAGGGAGGGAGGGGT
GGAGGGGTGTGTGCCTGCTCACATACCCTACCCCCGACGGCGATGCTCGT
GGATGAGGGAGAGGGTGAGGAGGAAGGAGTGAAGGAGGAAGGGAAAGAGG
GAGGGGTGGATGAGGGAGTGCTTACACCGGCGGGGAAGGGGCTGGGGGGG
TTAATGCTGCCAGGGATGGATGGAGAGACGCAGCTGCGGAAGGAGAAGAA
GGAGAGTGGGGAGATGAAGAGACCATTTGTTTTTGACGTCTCCAAGGCAT
TGGGCCGGGCAAGGAGGGGGAGGAGGGAGGGAGAGGGAGGGAAGGCGATG
GCGTCGGTGTTGTCCTCGGCAACATGGGCCAAGGGCAAGAAGGGAGGGCG
AGAGGACAATGAAAAGGAGAGTGTGTCGATCGCCGGAAGGGATACAGAGG
AGGCGGCTAGGGTTTTCTCTCGCGTGTTGACCAAAATGCACTTGAAACGC
TTGGTGGTACTGGGGCAGTTCAACCTGGGCTTTATCATTGCTCGAATTGG
CGCCGATGTGTTCATTCTGGATCAGCACGCCTGCGACGAAAAGTATAACT
TTGAGACACTGCAGTCCACGACTACCCTCCATGAGCAGCGCCTCATTGCA
CCCAAGCCTCTCGAATTGAGTGCCATGGAGGAAGTCATCATTCTCGAGCA
CCTCCACACCTTCAAACAGAATGGCTTCTCCTTTCTCGTCGACCCGGAGG
CAGGGCCCATGCAGAGGGTGAAACTCCTCTCCCTTCCTTACAGTAAAGGC
GTCCAATTTGGCTTGGAAGACATCCATGAACTCGCCTCCCTTCTCGGAGA
TTCCTCGTTTGGCTTTGCCGGTGCCGATGGTGAGGGGGCAGGGGAGGAGA
GCGGGAAGGAGGATAGAGGGCAAGGCGGGCCCTCAGTGCGGCTGCCGAAG
ATTAGGGCCATGTTTGCATCCAGGGCGTGTCGGATGTCGATTATGATTGG
AAAGGCCTTGACCAAGCCGCAGATGCAGAAGGTGGTGTCAAATTTGGCCG
AGATTGAGCAACCCTGGAACTGTCCTCACGGACGACCCACCATGCGACAC
CTGGTGGACCTGACGACGCTGCAAGGAGGAGAAGGGATCTAA

Synonyms

Publications