NO15G02990.1, NO15G02990.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G02990.1
Unique Name	NO15G02990.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4266
Alignment location	chr15:816187..821015 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:816187..821015 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G02990.1 vs.
Match: EWM22304.1 (phenazine biosynthesis protein family [Nannochloropsis gaditana])

HSP 1 Score: 582.0 bits (1499), Expect = 1.900e-162
Identity = 319/553 (57.69%), Postives = 373/553 (67.45%), Query Frame = 0

Query:    1 MQAHHVMRRLTAADIPKAHELEVLSYPEDEAASLEGMRFRQAQAGPFFYGLFDQSTSDLLALINGTLCMGTTLEHDTMSTHDPDGSTLCIHSVVVQPHLRKQGLATSFLRAYIREILAEHPHTLLRMRLITKVHNVGLYQRCGFTFLRPSPVVHGLEKWFEMGLDRLSLLESEGRAGRGRGREYIQVDAFTQEAFGGNPASVVFCRGGETADWMQNWAREFNLSETAFVTP--SSSSSSSSSSSSSSSSTFALRWFTPTIEVDLCGHATLAAAHALWVTGRVECKSEIVFETLSGNLVARRKVEEDAEGGEGGGRGGGGGWIELDFPSEPVV---KPVGDSELNKMEKELQKLYEAFGLTKAEDKRKVRERKRRELVDEQGPESQEEEEEVGSERGGTEEEDDIVFMARNRMDVLVVLTPGAFRLVKKRKPDMAILRTIECRGIIITCHAERRKMKREGMD-----LNAAYEGKDNYDFYSRFFGPRCGIDEDPVTGSAHCCLAPYWHARLGKTKLEGYQDSQRGGVVRMVYVPAASRVYLSGQAVVVKSGWL 544
            M+A+H +RR+TAAD+ +AH+LE +SYPEDEAASL GM +RQ  AG FFYGL+   T  LLALINGTLC GTTLEHDTMS HD  G TLCIHSVVV+P LR++GLAT+FL+ Y+  IL  +P  +LR+RLITK  N+GLY RCGF FLRPSPVVHG EKWFEMGLDRLSL+ SEG  G+G GR ++ VDAFT  AF GNPA+VVFC G ET +WMQ+WARE NLSETAFV+P   S   SSS  SSS  ++F+LRWFTP +EVDLCGHATLAAAHALW TGRVE  S I F T SG L+AR       EG EGGGRGGG GWI LDFP+EPVV   + +GD E                  +  D   VRE               E+E   G   GG      + F+ R+R+DVLVVLT  AF  +  + PD+ IL  IECRG+I+TC  E +     G +           G +   F SRFF PRCGI EDPVTGSAHCCLAPYW   LGK  L GYQ S+RGG+VR+ Y   ASRV L GQAV+VKSGWL
Sbjct:   13 MEAYHAVRRVTAADVGQAHDLETISYPEDEAASLAGMHYRQTHAGDFFYGLYHTGTGQLLALINGTLCRGTTLEHDTMSHHDTQGKTLCIHSVVVRPPLRRRGLATAFLQTYVHLILDAYPDRVLRLRLITKAQNLGLYHRCGFRFLRPSPVVHGQEKWFEMGLDRLSLVASEGELGKGLGRAFVHVDAFTGMAFRGNPAAVVFCHGDETPEWMQHWAREINLSETAFVSPLFPSHPPSSSCPSSSPPASFSLRWFTPVLEVDLCGHATLAAAHALWQTGRVELTSPITFHTASGTLLAR---WGGKEGEEGGGRGGGRGWISLDFPAEPVVPDGECLGDEE-----------------GRGRDLGLVREALH-----------LEDEGAGGGREGGDAGGGALKFVGRSRVDVLVVLTRAAFDRLYTQVPDVGILEKIECRGVIVTCQGEGKDAAEGGGEEGKGGRKLQESGMERAHFLSRFFAPRCGIVEDPVTGSAHCCLAPYWAGELGKRDLVGYQASKRGGMVRVRYDEGASRVCLWGQAVLVKSGWL 534

The following BLAST results are available for this feature:

BLAST of NO15G02990.1 vs.

BLAST of NO15G02990.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22304.1	1.900e-162	57.69	phenazine biosynthesis protein family [Nannochloro...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G02990	NO15G02990	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02990.1	NO15G02990.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02990.1.cds1	NO15G02990.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02990.1.cds2	NO15G02990.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02990.1.cds3	NO15G02990.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:816187..821015-
coding sequence from alignment at chr15:816187..821015-

mRNA sequence

>NO15G02990.1 ID=NO15G02990.1|Name=NO15G02990.1|organism=Nannochloropsis oceanica|type=mRNA|length=4266bp
TGCTGCTGCTGCTGCTGCTGCTGCAGTCGTTTCAATTCTTGGTCGAAGCC
GGAGAGGGCGGCGCGGATGGAAGACGCCCTCAGGTATGTTTCATACAGCT
CCCACCTCCCTGGGATGTCACTGAGTTCGCCCGAAGAGAGTGAGTCGACG
ACCAGACGGACGAAACTCGCGAAGGCCGGCCCTGAGAGACCCCTACTTCC
ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGTTGGTGG
GCCAGAGCGTGGGCTGGAGGTGGGTGAGGATGGCTGTATCGAGGGAGGCG
AGGTCACGGAGGAAATCCTTGGTCATGGCAGAGGGCGGGAGGGAAGACAA
GTTGGCCAGGTGCCCGCGGGAGGTGGCGGGGAGGAATAGCGTCTGGCAGG
AGACGGAGGGAAAGAGGGTGCCTATGCCCATGTGCTGGAGAGTGGTGGAT
GAGGAGGAAGAAGGGAACGAGGAAGGGGGAAAGATGTCCCGTCCCATGCT
GCTACGAACAGGGGCGGAGAGCAGACGGCTTAGCCAGGAGGTGCAGTCGG
CGTCGCCCTCGGCGAGGTTCATGGTGAAAGCTTGGACCTACAGCAGGAGG
GGAGGGACACAACGAAAGGAGGGAAACGAGGGGTAGGGCGCTTGGTTTAG
GTTTGATGGGATAGAAGGGGCAGGGGGAAGGAATGGAAGGAGGGATGACT
CGAAAAGTGAGTGTAAACAAAGCGAGGCCTGCGAGACCGGTACCCTTCCC
GTTCCCGCCCTCCCCCTTCCCTCCCATCCTCACCGTCATGAGCATCGGTG
GAAGGCTCAAAAGATCACTCAGCGACATCGCCGCCGTGCCATCCTCGATT
CCCCCTCGAGACAAAGAAAACGGGGCACGTTCCGGCGATGTTCCCCTTCC
TCCCTCCTTCCCTCCTGTCTTCCTCTCCTCCTCCTGTTGCTTCAGCGCCG
TCTTGATTGAGAAGAGCTGGGTGTTATGGACTAACAAGTCTAGGTACTCC
AATTCATTGGCATGCAGGACATGCATCGAGTTGTACAGGAGCAGGGAGGA
GAGGAGAGTGCTGGCGGCAAAGACCTTGGCGTCATAGCTTTCTGTTACAT
TGGAGACACTAAACCCCTCAGTATCGAGGAAGAGGACGTCTACACGCCGG
GGCACCTGCTGCTCCTGCTCGTGCAGGCACTGATGCTGGGGTGCATGTCC
GCCGTCCGTGGCGGGGGGGGAGGAGGAGGGGAGGATGGGGGAAGGGGGTA
GCAGCAAAGACTTGTGGTATATCCACACACCGCTTGTCTCTGGGTCGACA
TTCCGACCCACTTGAAACACTTCCTGTCCCGCGTCTGAAGGAGCCAGACT
TTCATCTTGCCATAACTTCTCCTTTTCGTCTCCTATTGCTACTACGGTAT
CGTCACCAACGCTCCTTCCAGCCGCAATTGCGATGGACCGCACCACCTGA
TTCAACAAAAAGCTCTTGCCGGTGTGATAAGGCCCTACGATTGACACAAC
GGCCACAGGCCCTTGTAATGTTTCGATAAATGCCAAAGTCTCCTCCACCA
CTTCGAGCGATGTTCGATTCCTCTCATCGGTCGGCCGCAATAGCTGACGA
GCTTCCCCTGAAGAGGTCTCGCGGGTGTGGCAAGGATGGAGAAGGACATG
CACAAGGAGGAGGAGAGTGACAAGATTTGAGAGGCGGAGGGGTAGGACGA
ATATGTGTTTCATTTGGGCTCTTGATCGGCGGGCGGGCGTGGCGATTATG
CTTGATAATGCTATATCTACGGGATAGGAGGGTATGGGAGGTCTTCGGAA
AGGGGGGACTAACACGTTTTCTCCCGTGCACACTCCTCACTCAAGGCACG
GTGGCCAGGAGAGGACGTCTTGTGGTGGCTACTCTTGCCGTCACCCTTCT
CGTCGCTGGAGTCTGTTTCGGTCACGCACGCCATAATGCAAGCCCACCAC
GTCATGCGTCGCTTAACAGCGGCAGATATTCCCAAAGCGCACGAGCTGGA
GGTCCTTTCCTACCCCGAGGATGAAGCCGCCTCCTTGGAGGGCATGCGAT
TCCGGCAAGCCCAGGCCGGACCCTTCTTTTACGGCCTCTTTGACCAAAGC
ACCTCCGATTTGCTCGCGCTCATCAATGGCACCCTCTGCATGGGCACCAC
CCTCGAGCACGATACCATGAGCACGCATGACCCCGACGGCTCTACCCTCT
GCATTCACTCCGTCGTCGTTCAGCCCCATCTCCGCAAGCAAGGCCTGGCA
ACATCCTTCCTCCGTGCCTACATTCGAGAAATCCTCGCGGAACACCCTCA
CACGCTTCTTCGCATGCGCTTGATCACCAAAGTTCACAATGTGGGGTTGT
ACCAGCGGTGCGGCTTCACCTTTCTCCGTCCCTCTCCAGTGGTGCATGGA
CTCGAGAAATGGTTTGAAATGGGTCTGGATCGACTGAGCTTGTTGGAGAG
TGAGGGGAGGGCGGGTAGGGGGAGGGGGAGGGAGTACATTCAGGTTGATG
CCTTTACGCAGGAGGCGTTTGGAGGGAATCCCGCTTCAGTGGTGTTTTGC
CGAGGAGGTGAAACTGCCGACTGGATGCAAAACTGGGCGAGAGAATTCAA
TTTGAGTGAAACCGCCTTTGTAACTCCTTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCTTCTTCCTCTTCAACGTTTGCCTTGCGTTGGTTCACA
CCCACTATTGAAGTAGACCTGTGCGGGCACGCCACGTTGGCAGCCGCGCA
TGCCTTGTGGGTCACAGGAAGGGTGGAGTGCAAGAGCGAGATTGTTTTTG
AAACGCTGTCAGGGAATTTGGTGGCGCGGAGGAAAGTGGAGGAGGATGCG
GAAGGGGGGGAGGGAGGGGGAAGAGGAGGGGGAGGGGGTTGGATTGAGCT
TGATTTCCCTTCAGAACCAGTGGTGAAGCCTGTGGGTGACAGTGAGCTGA
ATAAAATGGAGAAGGAGCTTCAAAAATTGTATGAGGCCTTTGGGTTGACG
AAAGCGGAGGACAAGAGAAAAGTAAGGGAGAGGAAGAGGCGGGAGTTGGT
GGACGAACAGGGGCCAGAATCCCAGGAAGAAGAGGAAGAGGTAGGGTCGG
AAAGAGGGGGAACTGAGGAGGAGGATGATATTGTCTTCATGGCACGGAAC
CGGATGGATGTATTGGTGGTCTTGACCCCCGGGGCATTTCGCTTGGTAAA
GAAAAGGAAGCCGGACATGGCGATTTTGAGGACGATCGAGTGCCGGGGGA
TCATCATCACGTGTCATGCAGAGAGGCGGAAGATGAAAAGGGAAGGGATG
GATCTGAATGCAGCGTATGAAGGTAAAGATAACTATGACTTTTATAGCCG
CTTTTTTGGCCCGCGGTGTGGCATTGATGAAGACCCCGTCACAGGCTCGG
CGCACTGTTGTCTCGCGCCTTATTGGCATGCGCGTTTGGGGAAGACAAAG
CTTGAGGGTTACCAAGATTCGCAGAGGGGAGGGGTGGTGCGAATGGTGTA
TGTCCCAGCGGCCTCCCGCGTGTATTTGAGTGGACAGGCAGTAGTGGTTA
AGTCGGGTTGGTTGGGAATGTGAGGCACAGGAAGAGGGATGGAAAGATAT
TGAGAATGGACAATTTTATCGAAATGCATTTGAAACTTTATGTCCTGGGA
AGGAGCTGTGATAGACACAGCCCCACCAGTTACAAATTATAACTTCCTCC
TCTTATGTGCTTTATGAATTCGCGCGAGCCTTAGTTTACTTTGCTTCTGC
AACTGTAGTTATGGTGTCAACACATGGAAGAGAGGAGGGAAACAGGGCAT
GGGCCGTCGCCCCATTATCGCGGACGCCATTTGGAGAGCGTCTCCACGGA
AGATGGGGCAACTTTGTGTTTCTTGGGAGTCGAATTGCTCCATGCATTTT
CTGCACATGTGAATGATAAGCATGCAGTCTGTTCCACGCTTCGGCTTGTC
GTCCTCGTTCTTCCGCGTGCAGCCTCCAGAGCGAGCGGGGCCTGAATCGT
GTGGACCGAGAGAGAAGCATGACCGGCTGCTGAATGATCATCATGATGGG
CTCGCACCTCTGCTCGCAAGTCAAATGCCCTTGCCTTGCCTGGCAACTCG
CACGTCAAATATGACTCAGCATCCATGCACATTGTACAGACACTCTTGCA
CATAACCCCTTTTGTCAAGTGCCCTCGAGGACACCGCTTCTCTTGACCAT
GGACTCCGTCTCGGCATTGGCCCTCACCCCCAACCCCCTATAACCCCTCC
CCCCTCCACCCTCAAC

protein sequence of NO15G02990.1

>NO15G02990.1-protein ID=NO15G02990.1-protein|Name=NO15G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp
MQAHHVMRRLTAADIPKAHELEVLSYPEDEAASLEGMRFRQAQAGPFFYG
LFDQSTSDLLALINGTLCMGTTLEHDTMSTHDPDGSTLCIHSVVVQPHLR
KQGLATSFLRAYIREILAEHPHTLLRMRLITKVHNVGLYQRCGFTFLRPS
PVVHGLEKWFEMGLDRLSLLESEGRAGRGRGREYIQVDAFTQEAFGGNPA
SVVFCRGGETADWMQNWAREFNLSETAFVTPSSSSSSSSSSSSSSSSTFA
LRWFTPTIEVDLCGHATLAAAHALWVTGRVECKSEIVFETLSGNLVARRK
VEEDAEGGEGGGRGGGGGWIELDFPSEPVVKPVGDSELNKMEKELQKLYE
AFGLTKAEDKRKVRERKRRELVDEQGPESQEEEEEVGSERGGTEEEDDIV
FMARNRMDVLVVLTPGAFRLVKKRKPDMAILRTIECRGIIITCHAERRKM
KREGMDLNAAYEGKDNYDFYSRFFGPRCGIDEDPVTGSAHCCLAPYWHAR
LGKTKLEGYQDSQRGGVVRMVYVPAASRVYLSGQAVVVKSGWLGM*

mRNA from alignment at chr15:816187..821015-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G02990.1 ID=NO15G02990.1|Name=NO15G02990.1|organism=Nannochloropsis oceanica|type=mRNA|length=4829bp|location=Sequence derived from alignment at chr15:816187..821015- (Nannochloropsis oceanica)
TGCTGCTGCTGCTGCTGCTGCTGCAGTCGTTTCAATTCTTGGTCGAAGCC
GGAGAGGGCGGCGCGGATGGAAGACGCCCTCAGGTATGTTTCATACAGCT
CCCACCTCCCTGGGATGTCACTGAGTTCGCCCGAAGAGAGTGAGTCGACG
ACCAGACGGACGAAACTCGCGAAGGCCGGCCCTGAGAGACCCCTACTTCC
ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGTTGGTGG
GCCAGAGCGTGGGCTGGAGGTGGGTGAGGATGGCTGTATCGAGGGAGGCG
AGGTCACGGAGGAAATCCTTGGTCATGGCAGAGGGCGGGAGGGAAGACAA
GTTGGCCAGGTGCCCGCGGGAGGTGGCGGGGAGGAATAGCGTCTGGCAGG
AGACGGAGGGAAAGAGGGTGCCTATGCCCATGTGCTGGAGAGTGGTGGAT
GAGGAGGAAGAAGGGAACGAGGAAGGGGGAAAGATGTCCCGTCCCATGCT
GCTACGAACAGGGGCGGAGAGCAGACGGCTTAGCCAGGAGGTGCAGTCGG
CGTCGCCCTCGGCGAGGTTCATGGTGAAAGCTTGGACCTACAGCAGGAGG
GGAGGGACACAACGAAAGGAGGGAAACGAGGGGTAGGGCGCTTGGTTTAG
GTTTGATGGGATAGAAGGGGCAGGGGGAAGGAATGGAAGGAGGGATGACT
CGAAAAGTGAGTGTAAACAAAGCGAGGCCTGCGAGACCGGTACCCTTCCC
GTTCCCGCCCTCCCCCTTCCCTCCCATCCTCACCGTCATGAGCATCGGTG
GAAGGCTCAAAAGATCACTCAGCGACATCGCCGCCGTGCCATCCTCGATT
CCCCCTCGAGACAAAGAAAACGGGGCACGTTCCGGCGATGTTCCCCTTCC
TCCCTCCTTCCCTCCTGTCTTCCTCTCCTCCTCCTGTTGCTTCAGCGCCG
TCTTGATTGAGAAGAGCTGGGTGTTATGGACTAACAAGTCTAGGTACTCC
AATTCATTGGCATGCAGGACATGCATCGAGTTGTACAGGAGCAGGGAGGA
GAGGAGAGTGCTGGCGGCAAAGACCTTGGCGTCATAGCTTTCTGTTACAT
TGGAGACACTAAACCCCTCAGTATCGAGGAAGAGGACGTCTACACGCCGG
GGCACCTGCTGCTCCTGCTCGTGCAGGCACTGATGCTGGGGTGCATGTCC
GCCGTCCGTGGCGGGGGGGGAGGAGGAGGGGAGGATGGGGGAAGGGGGTA
GCAGCAAAGACTTGTGGTATATCCACACACCGCTTGTCTCTGGGTCGACA
TTCCGACCCACTTGAAACACTTCCTGTCCCGCGTCTGAAGGAGCCAGACT
TTCATCTTGCCATAACTTCTCCTTTTCGTCTCCTATTGCTACTACGGTAT
CGTCACCAACGCTCCTTCCAGCCGCAATTGCGATGGACCGCACCACCTGA
TTCAACAAAAAGCTCTTGCCGGTGTGATAAGGCCCTACGATTGACACAAC
GGCCACAGGCCCTTGTAATGTTTCGATAAATGCCAAAGTCTCCTCCACCA
CTTCGAGCGATGTTCGATTCCTCTCATCGGTCGGCCGCAATAGCTGACGA
GCTTCCCCTGAAGAGGTCTCGCGGGTGTGGCAAGGATGGAGAAGGACATG
CACAAGGAGGAGGAGAGTGACAAGATTTGAGAGGCGGAGGGGTAGGACGA
ATATGTGTTTCATTTGGGCTCTTGATCGGCGGGCGGGCGTGGCGATTATG
CTTGATAATGCTATATCTACGGGATAGGAGGGTATGGGAGGTCTTCGGAA
AGGGGGGACTAACACGTTTTCTCCCGTGCACACTCCTCACTCAAGGCACG
GTGGCCAGGAGAGGACGTCTTGTGGTGGCTACTCTTGCCGTCACCCTTCT
CGTCGCTGGAGTCTGTTTCGGTGTGAGTGAGGGGGCGTAGCGTTGGCTTG
GGTTGGGACACGGCACTCAAGGAAGGCAATCGCCCACTCAAGTATCGTCA
GTAGACTGAGCACTCACATAGCTTCACACCACAGCACGCACGCCATAATG
CAAGCCCACCACGTCATGCGTCGCTTAACAGCGGCAGATATTCCCAAAGC
GCACGAGCTGGAGGTCCTTTCCTACCCCGAGGTAAGTGTACGGCGCGTAC
TGGACGGATACGTCCCCATTCGTCTGTCCGCCCTAGCCACTCTAACTATA
CATGGCTGGCAACTTAACGAGCAGATAGGAAAAGAGCAGGAAGAATTTAG
ACCGACCGCGCGACTCCACCAAGCCATCGAACTTCTAATCCTCCTCTTTC
CCCCCGCACCTCCTCCGCCACCCCCCCCACAACACGACAGGATGAAGCCG
CCTCCTTGGAGGGCATGCGATTCCGGCAAGCCCAGGCCGGACCCTTCTTT
TACGGCCTCTTTGACCAAAGCACCTCCGATTTGCTCGCGCTCATCAATGG
CACCCTCTGCATGGGCACCACCCTCGAGCACGATACCATGAGCACGCATG
ACCCCGACGGCTCTACCCTCTGCATTCACTCCGTCGTCGTTCAGCCCCAT
CTCCGCAAGCAAGGCCTGGCAACATCCTTCCTCCGTGCCTACATTCGAGA
AATCCTCGCGGAACACCCTCACACGCTTCTTCGCATGCGCTTGATCACCA
AAGTTCACAATGTGGGGTTGTACCAGCGGTGCGGCTTCACCTTTCTCCGT
CCCTCTCCAGTGGTGCATGGACTCGAGAAATGGTTTGAAATGGGTCTGGA
TCGACTGAGCTTGTTGGAGAGTGAGGGGAGGGCGGGTAGGGGGAGGGGGA
GGGAGTACATTCAGGTTGATGCCTTTACGCAGGAGGCGTTTGGAGGGAAT
CCCGCTTCAGTGGTGTTTTGCCGAGGTAGGAGGACCAGGGGAGGATGGGA
GGGAGGGAGGGAGGGAGGAGAAGAGGGATGGAGGGATAGAGGGATGGGGG
CTCTGCGTGCAAGGTAGGATGTACATGCAAAAAAAAGGCCATGTCGTTGA
CAATAACAAGTGGTCAGTGGATTGACAGCCCTCCCTTGCCGAGAGTGTCC
TCCCACGCCTCCTCACCGTGTCCTTACTCCCTTTCCCTTGTCTTCATCGC
TCCATACGTACTCCCAGGAGGTGAAACTGCCGACTGGATGCAAAACTGGG
CGAGAGAATTCAATTTGAGTGAAACCGCCTTTGTAACTCCTTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCCTCTTCAACGTTTGCCTT
GCGTTGGTTCACACCCACTATTGAAGTAGACCTGTGCGGGCACGCCACGT
TGGCAGCCGCGCATGCCTTGTGGGTCACAGGAAGGGTGGAGTGCAAGAGC
GAGATTGTTTTTGAAACGCTGTCAGGGAATTTGGTGGCGCGGAGGAAAGT
GGAGGAGGATGCGGAAGGGGGGGAGGGAGGGGGAAGAGGAGGGGGAGGGG
GTTGGATTGAGCTTGATTTCCCTTCAGAACCAGTGGTGAAGCCTGTGGGT
GACAGTGAGCTGAATAAAATGGAGAAGGAGCTTCAAAAATTGTATGAGGC
CTTTGGGTTGACGAAAGCGGAGGACAAGAGAAAAGTAAGGGAGAGGAAGA
GGCGGGAGTTGGTGGACGAACAGGGGCCAGAATCCCAGGAAGAAGAGGAA
GAGGTAGGGTCGGAAAGAGGGGGAACTGAGGAGGAGGATGATATTGTCTT
CATGGCACGGAACCGGATGGATGTATTGGTGGTCTTGACCCCCGGGGCAT
TTCGCTTGGTAAAGAAAAGGAAGCCGGACATGGCGATTTTGAGGACGATC
GAGTGCCGGGGGATCATCATCACGTGTCATGCAGAGAGGCGGAAGATGAA
AAGGGAAGGGATGGATCTGAATGCAGCGTATGAAGGTAAAGATAACTATG
ACTTTTATAGCCGCTTTTTTGGCCCGCGGTGTGGCATTGATGAAGACCCC
GTCACAGGCTCGGCGCACTGTTGTCTCGCGCCTTATTGGCATGCGCGTTT
GGGGAAGACAAAGCTTGAGGGTTACCAAGATTCGCAGAGGGGAGGGGTGG
TGCGAATGGTGTATGTCCCAGCGGCCTCCCGCGTGTATTTGAGTGGACAG
GCAGTAGTGGTTAAGTCGGGTTGGTTGGGAATGTGAGGCACAGGAAGAGG
GATGGAAAGATATTGAGAATGGACAATTTTATCGAAATGCATTTGAAACT
TTATGTCCTGGGAAGGAGCTGTGATAGACACAGCCCCACCAGTTACAAAT
TATAACTTCCTCCTCTTATGTGCTTTATGAATTCGCGCGAGCCTTAGTTT
ACTTTGCTTCTGCAACTGTAGTTATGGTGTCAACACATGGAAGAGAGGAG
GGAAACAGGGCATGGGCCGTCGCCCCATTATCGCGGACGCCATTTGGAGA
GCGTCTCCACGGAAGATGGGGCAACTTTGTGTTTCTTGGGAGTCGAATTG
CTCCATGCATTTTCTGCACATGTGAATGATAAGCATGCAGTCTGTTCCAC
GCTTCGGCTTGTCGTCCTCGTTCTTCCGCGTGCAGCCTCCAGAGCGAGCG
GGGCCTGAATCGTGTGGACCGAGAGAGAAGCATGACCGGCTGCTGAATGA
TCATCATGATGGGCTCGCACCTCTGCTCGCAAGTCAAATGCCCTTGCCTT
GCCTGGCAACTCGCACGTCAAATATGACTCAGCATCCATGCACATTGTAC
AGACACTCTTGCACATAACCCCTTTTGTCAAGTGCCCTCGAGGACACCGC
TTCTCTTGACCATGGACTCCGTCTCGGCATTGGCCCTCACCCCCAACCCC
CTATAACCCCTCCCCCCTCCACCCTCAAC

Coding sequence (CDS) from alignment at chr15:816187..821015-

>NO15G02990.1 ID=NO15G02990.1|Name=NO15G02990.1|organism=Nannochloropsis oceanica|type=CDS|length=1638bp|location=Sequence derived from alignment at chr15:816187..821015- (Nannochloropsis oceanica)
ATGCAAGCCCACCACGTCATGCGTCGCTTAACAGCGGCAGATATTCCCAA
AGCGCACGAGCTGGAGGTCCTTTCCTACCCCGAGGATGAAGCCGCCTCCT
TGGAGGGCATGCGATTCCGGCAAGCCCAGGCCGGACCCTTCTTTTACGGC
CTCTTTGACCAAAGCACCTCCGATTTGCTCGCGCTCATCAATGGCACCCT
CTGCATGGGCACCACCCTCGAGCACGATACCATGAGCACGCATGACCCCG
ACGGCTCTACCCTCTGCATTCACTCCGTCGTCGTTCAGCCCCATCTCCGC
AAGCAAGGCCTGGCAACATCCTTCCTCCGTGCCTACATTCGAGAAATCCT
CGCGGAACACCCTCACACGCTTCTTCGCATGCGCTTGATCACCAAAGTTC
ACAATGTGGGGTTGTACCAGCGGTGCGGCTTCACCTTTCTCCGTCCCTCT
CCAGTGGTGCATGGACTCGAGAAATGGTTTGAAATGGGTCTGGATCGACT
GAGCTTGTTGGAGAGTGAGGGGAGGGCGGGTAGGGGGAGGGGGAGGGAGT
ACATTCAGGTTGATGCCTTTACGCAGGAGGCGTTTGGAGGGAATCCCGCT
TCAGTGGTGTTTTGCCGAGGAGGTGAAACTGCCGACTGGATGCAAAACTG
GGCGAGAGAATTCAATTTGAGTGAAACCGCCTTTGTAACTCCTTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCCTCTTCAACGTTTGCC
TTGCGTTGGTTCACACCCACTATTGAAGTAGACCTGTGCGGGCACGCCAC
GTTGGCAGCCGCGCATGCCTTGTGGGTCACAGGAAGGGTGGAGTGCAAGA
GCGAGATTGTTTTTGAAACGCTGTCAGGGAATTTGGTGGCGCGGAGGAAA
GTGGAGGAGGATGCGGAAGGGGGGGAGGGAGGGGGAAGAGGAGGGGGAGG
GGGTTGGATTGAGCTTGATTTCCCTTCAGAACCAGTGGTGAAGCCTGTGG
GTGACAGTGAGCTGAATAAAATGGAGAAGGAGCTTCAAAAATTGTATGAG
GCCTTTGGGTTGACGAAAGCGGAGGACAAGAGAAAAGTAAGGGAGAGGAA
GAGGCGGGAGTTGGTGGACGAACAGGGGCCAGAATCCCAGGAAGAAGAGG
AAGAGGTAGGGTCGGAAAGAGGGGGAACTGAGGAGGAGGATGATATTGTC
TTCATGGCACGGAACCGGATGGATGTATTGGTGGTCTTGACCCCCGGGGC
ATTTCGCTTGGTAAAGAAAAGGAAGCCGGACATGGCGATTTTGAGGACGA
TCGAGTGCCGGGGGATCATCATCACGTGTCATGCAGAGAGGCGGAAGATG
AAAAGGGAAGGGATGGATCTGAATGCAGCGTATGAAGGTAAAGATAACTA
TGACTTTTATAGCCGCTTTTTTGGCCCGCGGTGTGGCATTGATGAAGACC
CCGTCACAGGCTCGGCGCACTGTTGTCTCGCGCCTTATTGGCATGCGCGT
TTGGGGAAGACAAAGCTTGAGGGTTACCAAGATTCGCAGAGGGGAGGGGT
GGTGCGAATGGTGTATGTCCCAGCGGCCTCCCGCGTGTATTTGAGTGGAC
AGGCAGTAGTGGTTAAGTCGGGTTGGTTGGGAATGTGA

Synonyms

Publications