NO15G02750.1, NO15G02750.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G02750.1
Unique NameNO15G02750.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length540
Alignment locationchr15:752157..752845 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:752157..752845 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G02750.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02750NO15G02750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G02750.1NO15G02750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G02750.1.cds1NO15G02750.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02750.1.cds2NO15G02750.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G02750.1 ID=NO15G02750.1|Name=NO15G02750.1|organism=Nannochloropsis oceanica|type=mRNA|length=540bp
ATGTTAGTGACCGACGAGAATGCTCTTCTTCCTGGTCTGTCTTCTCATGA
GGAGGAGGAAAAGGAGATGGAGCTCCATCACCTCCATCACGACGAAGAAC
AACAGGAGGAGGACGAAAACGACTTCCAAGGTTTCGACCTCGAAGTCGAG
GACGACAAGGTTAATGATAACAACAGCTCCATCACCAGCGACAGTGATGC
CATTGCCATGGCCACAGCGGAAACAACTTCTGACACCGGCACCATCCGTA
CGAGAAACAAGGCCAGTAGGACGCCTTCGGGGATTGCACTGGCCTTCGCG
AAGCCAGACGTCTCGCCGGAAGAGGCTGAGGAGTACATCAAAAAACATCT
CATGCCAGACGCTATGCTTAGGGAGGCCTCTTCCGGCGAGACGTCTGGCT
TCGCGAAGGCCAGTGCAATCCCCGAAGGCGTCCTACTGGCCTTGTTTCTC
GTACGGATGGTGCCGGTGTCAGAAGTTGTTTCCGCTGTGGCCATGGCAAT
GGCATCACTGTCGCTGGTGATGGAGCCGTTGTTCAATTGA
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protein sequence of NO15G02750.1

>NO15G02750.1-protein ID=NO15G02750.1-protein|Name=NO15G02750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bp
MLVTDENALLPGLSSHEEEEKEMELHHLHHDEEQQEEDENDFQGFDLEVE
DDKVNDNNSSITSDSDAIAMATAETTSDTGTIRTRNKASRTPSGIALAFA
KPDVSPEEAEEYIKKHLMPDAMLREASSGETSGFAKASAIPEGVLLALFL
VRMVPVSEVVSAVAMAMASLSLVMEPLFN*
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mRNA from alignment at chr15:752157..752845-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G02750.1 ID=NO15G02750.1|Name=NO15G02750.1|organism=Nannochloropsis oceanica|type=mRNA|length=689bp|location=Sequence derived from alignment at chr15:752157..752845- (Nannochloropsis oceanica)
ATGTTAGTGACCGACGAGAATGCTCTTCTTCCTGGTCTGTCTTCTCATGA
GGAGGAGGAAAAGGAGATGGAGCTCCATCACCTCCATCACGACGAAGAAC
AACAGGAGGAGGACGAAAACGACTTCCAAGGTTTCGACCTCGAAGTCGAG
GACGACAAGGTTAATGATAACAACAGCTCCATCACCAGCGACAGTGATGC
CATTGCCATGGCCACAGCGGAAACAACTTCTGACACCGGCACCATCCGTA
CGAGAAACAAGGCCAGTAGGACGCCTTCGGGGATTGCACTGGCCTTCGCG
AAGCCAGACGTCTCGCCGGAAGAGGCTGAGGAGTACATCAAAAAACATCT
CATGCCAGACGCTATGCTTAGGGAGGGTAATTGGAGAATCAAAGAGGCAC
CCAAATTCCATGTTAATCGCAGCCCAATCTGGACATAACATGGAATTTGG
GTGCCTCTTTGATTCTCCAATTACCCTCCCTAAGCATAGCGTCTGGCATG
AGATGTTTTTTGATGTACTCCTCAGCCTCTTCCGGCGAGACGTCTGGCTT
CGCGAAGGCCAGTGCAATCCCCGAAGGCGTCCTACTGGCCTTGTTTCTCG
TACGGATGGTGCCGGTGTCAGAAGTTGTTTCCGCTGTGGCCATGGCAATG
GCATCACTGTCGCTGGTGATGGAGCCGTTGTTCAATTGA
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Coding sequence (CDS) from alignment at chr15:752157..752845-

>NO15G02750.1 ID=NO15G02750.1|Name=NO15G02750.1|organism=Nannochloropsis oceanica|type=CDS|length=540bp|location=Sequence derived from alignment at chr15:752157..752845- (Nannochloropsis oceanica)
ATGTTAGTGACCGACGAGAATGCTCTTCTTCCTGGTCTGTCTTCTCATGA
GGAGGAGGAAAAGGAGATGGAGCTCCATCACCTCCATCACGACGAAGAAC
AACAGGAGGAGGACGAAAACGACTTCCAAGGTTTCGACCTCGAAGTCGAG
GACGACAAGGTTAATGATAACAACAGCTCCATCACCAGCGACAGTGATGC
CATTGCCATGGCCACAGCGGAAACAACTTCTGACACCGGCACCATCCGTA
CGAGAAACAAGGCCAGTAGGACGCCTTCGGGGATTGCACTGGCCTTCGCG
AAGCCAGACGTCTCGCCGGAAGAGGCTGAGGAGTACATCAAAAAACATCT
CATGCCAGACGCTATGCTTAGGGAGGCCTCTTCCGGCGAGACGTCTGGCT
TCGCGAAGGCCAGTGCAATCCCCGAAGGCGTCCTACTGGCCTTGTTTCTC
GTACGGATGGTGCCGGTGTCAGAAGTTGTTTCCGCTGTGGCCATGGCAAT
GGCATCACTGTCGCTGGTGATGGAGCCGTTGTTCAATTGA
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Synonyms
Publications