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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr15 | genome | chr15:741155..744682 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO15G02710.1 vs.
Match: EWM22344.1 (alpha beta hydrolase fold protein [Nannochloropsis gaditana]) HSP 1 Score: 373.6 bits (958), Expect = 6.400e-100 Identity = 196/348 (56.32%), Postives = 240/348 (68.97%), Query Frame = 0
Query: 1 MRRPPGRVPVHYLLMLVAIITTMLLRASHGFPIVFS-ATSLRHARRFFSLKAVNRMTSSM-----LEIQDVTLPGEPTREVHVLDTGPCTGRP----IAPPIILIGGTAQVITSWQGHIQALGKNRRLIIYEARGQGRRTLLDLTQASLGTHIEDFRRIHAALQLNGPVDLCGFSFGGRVSLGVAAQAPELVRRLVLTGVPAERDAVGRLILQSWKAALRRGSLHEFAWNSMLACHGPAFLTKNEKKIPEWVDFIYRSNTVEGILSIVEQSQVYDVQDPMHTLQLAKQVVAPTLLLGGDEDRVASALEIERLAAEAGKGWDVVLFEGANHNCVFETPVAWAKEVVRFL 339
M RP R+ H L L+ ++ RA+ F +V H+ R + +++S ++I DV+LP EP R V VLDTG + P + PP++LIGGTAQ I SW GHI L + RRLI+YE RGQGR T LDL+ ASL H+EDF R+HAAL++ GPVDLCGFSFGGRVSLGVAA P LVRRLVLTGVPAERDAVGRLI++SW+AAL RG L EF WNSML CHG AFL+K E KIPEWV F+ +NTV G+ ++V +S DV+DP HTLQLA +V APTLLLG +D+VA+ALEI+RLA +GW V F GA HNCVFE V W +EV+ FL
Sbjct: 1 MPRPHARLSAHSLFCLLTVV-----RAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO15G02710.1 ID=NO15G02710.1|Name=NO15G02710.1|organism=Nannochloropsis oceanica|type=mRNA|length=3426bp
ACACCCAACAGGCCATAAATGCGCCGCCCGCCAGGCCGGGTGCCGGTGCA
TTACCTGCTCATGCTTGTCGCCATAATTACGACGATGCTCCTACGTGCGT
CGCACGGCTTTCCCATCGTCTTTTCTGCTACTTCGCTTAGACATGCCCGG
CGTTTTTTTTCATTGAAAGCCGTGAATCGCATGACCTCATCTATGCTCGA
GATCCAAGACGTGACGCTGCCGGGCGAACCCACGCGCGAGGTCCATGTGC
TCGACACAGGGCCGTGCACAGGTAGACCTATCGCACCCCCCATCATCCTA
ATCGGGGGGACGGCCCAAGTAATCACCAGTTGGCAAGGCCACATTCAAGC
CTTAGGCAAAAATCGACGTCTTATTATATATGAGGCCCGGGGCCAAGGCC
GCCGGACCCTTTTGGATTTGACCCAAGCGTCCCTGGGCACCCACATAGAG
GATTTTCGCCGCATCCACGCCGCTCTCCAACTCAATGGTCCTGTTGACTT
ATGTGGCTTCAGCTTTGGCGGCCGTGTCAGCCTTGGCGTGGCCGCGCAAG
CCCCCGAGTTGGTGCGTCGCTTGGTGCTGACGGGTGTGCCTGCTGAGCGC
GACGCGGTGGGAAGACTTATCCTACAGTCGTGGAAAGCAGCCCTCAGACG
AGGAAGCCTGCATGAGTTCGCCTGGAACTCCATGCTTGCCTGTCATGGAC
CCGCCTTCCTGACCAAGAACGAGAAGAAGATCCCTGAATGGGTTGACTTC
ATCTACCGATCCAACACCGTGGAGGGGATTCTATCCATTGTCGAACAGTC
ACAGGTATATGATGTGCAAGACCCTATGCATACCCTCCAGCTGGCCAAGC
AAGTGGTGGCTCCCACCCTCCTTCTGGGGGGGGATGAGGACAGAGTGGCC
AGTGCCTTAGAGATCGAACGGTTAGCGGCCGAGGCGGGCAAGGGGTGGGA
TGTTGTTTTGTTCGAAGGAGCGAATCACAATTGTGTGTTTGAAACGCCAG
TTGCGTGGGCGAAAGAGGTGGTGCGGTTTCTCAGCGAGGGTTAGGGAATG
AAGAAGGGAAAGAGGGAGGGAGAAAGTAGACGAGACTGTGTTCTAGATCT
TCCATGTACGTCTGTTTTGAAAGAAGAGGGATGGTGGACAGCGCCCCAAA
ACTCTTCCCTTTCGGAGACTGGTGAAGAGGGAGGGAGGGAGGAATTGAAA
CGGTGGCGCGCGCCTTGGGGGCGGAATGTAAATGTAACCAATAGAAAATA
ATATAGAACTTGTACCGATATACAAGCGGTGCAAGTGCCCAACCAATACA
CACAGAACAAGACGGATTTTGAAAATAAAGACGTCCACCGATGATATATA
TGTCAAGCCCTCGACAACCGAGGAAGCATCTGGTGTGGCACATCTCGTTC
TCTGTCTCATTCGGGATTTACCGAATGATTCCCCTTTTTACTTTGTTCTC
GTTCATTTGCTGCCCCCCTTACCTCCCCTCTCCTCCCCTCCCTCATCCAC
CCTCACCACAAAGCCCGTGTAATCATAGCCACACACCACCCCCTCTACCA
TCCTTCCCTGTTTCCGTCCCTCCTCCACTTCCACCGCAAGCTGCACTGGC
TTGGCGATATTACCGGCCTTCCCCGTCCCGCATTGGCCCCCCAAATTGTG
ACCCCACACGTACACCTGTGGTTTGTATTTTAATTCAACGTCTCTCGAGG
GTGGGCCTCCGCGACTGTTGGCCTTCACGCTCGGCTCCACCACAACCGCC
GCACTGTGGTTGCTCCCACACCCCAACACCGGCACGGGCAACTTCACTTC
GGGGAATGTCAACAACCGCAGATCCTTAATCTGCTTTGCCACCGACAAGT
GCACGTAAGCCCTGTCTCCTAGCTGCCCGTACTGACCAAAACCCGACGCC
CACATCTCCACAACCCTCGCAGGTGTCTTGGCAGCCTTTCCAAAATTGCC
CTTTTCGAGCCAGTAACCACCCTCCTCCACGACGACAGAAAAGAGGGAAT
GGTTCTCTCCTGCGGCAATGGCGCCCACAATCACATCTTCAAACGCCCGG
ATTTTCTTGGGCTCCCAAAAAACAGCTTCGGGGCGATCTTTCGTCACTTT
CCATGTCTCCCCCTGTGCGAGTTGGTACCACGCGTCGGCCCCGCAGGACC
ACGCCCCCCCATCCTCATCCAGCAGGAGAGAGTGCGTCCCTCCACAGGCC
GCGCTGAGGACTCTCTTCCCCTGCGGAAGGGGCTTCATGGCAATAGGGGA
GGAAAAGAAATTCTTGCGGTGGTAATTGTTGTTCCTGACATGTTCTCCGC
CTTCTTCTTGATGTAGTTGTTGTGGCCCGAGTCCGAGCCGGCCGTCGGGG
TTTGCCCCCACCCCATAGACCGCACCGTTGCTCAGAACGAAGAGTGCATG
CTCTGGCCCGGCACTCACGTGTGTAACGGATGCAGGGCGTTTTTGTCCGA
TAATGTTGTTGTCGCTGTTGGTTTCCCAAGTGCTGTATTTGTACGGGCCT
TTAAAACGTGGTTGAGACGACGCTGCAGCTCCTGCTGCTGTTACTGCTGC
TGCTGACTGCCCTGCACCTTTTTCCTCGTTTGCCGCTGATGGCACGCGTG
TCCAATATAATATCTCTCCTTTGCTCGTCCGTCCATAGATTTTATCTCGG
CTACATGCCACCTGCATCACTGCCTGTGCCGCTCCAAACCATCCACCCTT
CGCCTCATGCAACGTACTGGTGATCACCATCGCTCCTCCGGTCGGACCTC
CCTCCCCCAAGCCCGAGCACAGATAAACGTTTCCATTCTTGGCTACCGCT
GCCCAAGCAGGACCGAAGCTCACACTGTCAATCGGGCTGGGTGGGCCAGG
AAAAACGACTTCTTTGGGCACTCCAACCACGGTCTCCTTGAAACCTCGCC
CGCTCTCTGAACCTGTCACGTAAAGGGTTTGGGGCGTGCTTTTGGAAGGG
GCGCAGAATGAGGCGGAAGACGAATTACTGTGAAAACTCTTGGGCTCAGA
AGAGGCCAGGTAGAGCAGAGAAGCGATAGCCGTGGCAGCGGCTGTAACGG
CAGCCGGGGTGCTGGAGGAGGAGGAGTAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAAGACCAGGCGCGCCGTGGAAAAGTGGACGAATTCGTCATACA
CGCAGCAGTTCGGGCCCACGAGCGCCTTAATAAGAGGGTCGAAGCGGACA
TGGCTGTGTCATGGGTGTGTATGTAGCGTATGGGGGGTTGTGGAGTTGAG
AAATATAGACGCCACGCACGTGAGAATGGGAGTGGACTTGAGGCACGGTT
GGGAATGGTATAGGCGCGATGTGCCTCATAGCGAGGACTAACAATGATTT
TTGTTTAAACATCAGTCATTGTGACGGTCAGTCTAGGGACTTTGTCTTGT
GGGAGGGGCTGTTGGCGCGTTGTGAA back to topprotein sequence of NO15G02710.1 >NO15G02710.1-protein ID=NO15G02710.1-protein|Name=NO15G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MRRPPGRVPVHYLLMLVAIITTMLLRASHGFPIVFSATSLRHARRFFSLK
AVNRMTSSMLEIQDVTLPGEPTREVHVLDTGPCTGRPIAPPIILIGGTAQ
VITSWQGHIQALGKNRRLIIYEARGQGRRTLLDLTQASLGTHIEDFRRIH
AALQLNGPVDLCGFSFGGRVSLGVAAQAPELVRRLVLTGVPAERDAVGRL
ILQSWKAALRRGSLHEFAWNSMLACHGPAFLTKNEKKIPEWVDFIYRSNT
VEGILSIVEQSQVYDVQDPMHTLQLAKQVVAPTLLLGGDEDRVASALEIE
RLAAEAGKGWDVVLFEGANHNCVFETPVAWAKEVVRFLSEG* back to topmRNA from alignment at chr15:741155..744682- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO15G02710.1 ID=NO15G02710.1|Name=NO15G02710.1|organism=Nannochloropsis oceanica|type=mRNA|length=3528bp|location=Sequence derived from alignment at chr15:741155..744682- (Nannochloropsis oceanica)
ACACCCAACAGGCCATAAATGCGCCGCCCGCCAGGCCGGGTGCCGGTGCA
TTACCTGCTCATGCTTGTCGCCATAATTACGACGATGCTCCTACGTGCGT
CGCACGGCTTTCCCATCGTCTTTTCTGCTACTTCGCTTAGACATGCCCGG
CGTTTTTTTTCATTGAAAGCCGTGAATCGCATGACCTCATCTATGCTCGA
GATCCAAGACGTGACGCTGCCGGGCGAACCCACGCGCGAGGTCCATGTGC
TCGACACAGGGCCGTGCACAGGTAGACCTATCGCACCCCCCATCATCCTA
ATCGGGGGGACGGCCCAAGTAATCACCAGTTGGCAAGGCCACATTCAAGC
CTTAGGCAAAAATCGACGTCTTATTATATATGAGGCCCGGGGCCAAGGCC
GCCGGACCCTTTTGGATTTGACCCAAGCGTCCCTGGGCACCCACATAGAG
GATTTTCGCCGCATCCACGCCGCTCTCCAACTCAATGGTCCTGTTGACTT
ATGTGGCTTCAGCTTTGGCGGCCGTGTCAGCCTTGGCGTGGCCGCGCAAG
CCCCCGAGTTGGTGCGTCGCTTGGTGCTGACGGGTGTGCCTGCTGAGCGC
GACGCGGTGGGAAGACTTATCCTACAGTCGTGGAAAGCAGGTAGGTGTTT
CTACGCTGGAGGGTGGGATCAGGAGATCAAGAACAGGAAGGGAGGAAAGA
AGGTAGTCTCATGCCAATCCCTTTCTCTTTCACCCCACACAGCCCTCAGA
CGAGGAAGCCTGCATGAGTTCGCCTGGAACTCCATGCTTGCCTGTCATGG
ACCCGCCTTCCTGACCAAGAACGAGAAGAAGATCCCTGAATGGGTTGACT
TCATCTACCGATCCAACACCGTGGAGGGGATTCTATCCATTGTCGAACAG
TCACAGGTATATGATGTGCAAGACCCTATGCATACCCTCCAGCTGGCCAA
GCAAGTGGTGGCTCCCACCCTCCTTCTGGGGGGGGATGAGGACAGAGTGG
CCAGTGCCTTAGAGATCGAACGGTTAGCGGCCGAGGCGGGCAAGGGGTGG
GATGTTGTTTTGTTCGAAGGAGCGAATCACAATTGTGTGTTTGAAACGCC
AGTTGCGTGGGCGAAAGAGGTGGTGCGGTTTCTCAGCGAGGGTTAGGGAA
TGAAGAAGGGAAAGAGGGAGGGAGAAAGTAGACGAGACTGTGTTCTAGAT
CTTCCATGTACGTCTGTTTTGAAAGAAGAGGGATGGTGGACAGCGCCCCA
AAACTCTTCCCTTTCGGAGACTGGTGAAGAGGGAGGGAGGGAGGAATTGA
AACGGTGGCGCGCGCCTTGGGGGCGGAATGTAAATGTAACCAATAGAAAA
TAATATAGAACTTGTACCGATATACAAGCGGTGCAAGTGCCCAACCAATA
CACACAGAACAAGACGGATTTTGAAAATAAAGACGTCCACCGATGATATA
TATGTCAAGCCCTCGACAACCGAGGAAGCATCTGGTGTGGCACATCTCGT
TCTCTGTCTCATTCGGGATTTACCGAATGATTCCCCTTTTTACTTTGTTC
TCGTTCATTTGCTGCCCCCCTTACCTCCCCTCTCCTCCCCTCCCTCATCC
ACCCTCACCACAAAGCCCGTGTAATCATAGCCACACACCACCCCCTCTAC
CATCCTTCCCTGTTTCCGTCCCTCCTCCACTTCCACCGCAAGCTGCACTG
GCTTGGCGATATTACCGGCCTTCCCCGTCCCGCATTGGCCCCCCAAATTG
TGACCCCACACGTACACCTGTGGTTTGTATTTTAATTCAACGTCTCTCGA
GGGTGGGCCTCCGCGACTGTTGGCCTTCACGCTCGGCTCCACCACAACCG
CCGCACTGTGGTTGCTCCCACACCCCAACACCGGCACGGGCAACTTCACT
TCGGGGAATGTCAACAACCGCAGATCCTTAATCTGCTTTGCCACCGACAA
GTGCACGTAAGCCCTGTCTCCTAGCTGCCCGTACTGACCAAAACCCGACG
CCCACATCTCCACAACCCTCGCAGGTGTCTTGGCAGCCTTTCCAAAATTG
CCCTTTTCGAGCCAGTAACCACCCTCCTCCACGACGACAGAAAAGAGGGA
ATGGTTCTCTCCTGCGGCAATGGCGCCCACAATCACATCTTCAAACGCCC
GGATTTTCTTGGGCTCCCAAAAAACAGCTTCGGGGCGATCTTTCGTCACT
TTCCATGTCTCCCCCTGTGCGAGTTGGTACCACGCGTCGGCCCCGCAGGA
CCACGCCCCCCCATCCTCATCCAGCAGGAGAGAGTGCGTCCCTCCACAGG
CCGCGCTGAGGACTCTCTTCCCCTGCGGAAGGGGCTTCATGGCAATAGGG
GAGGAAAAGAAATTCTTGCGGTGGTAATTGTTGTTCCTGACATGTTCTCC
GCCTTCTTCTTGATGTAGTTGTTGTGGCCCGAGTCCGAGCCGGCCGTCGG
GGTTTGCCCCCACCCCATAGACCGCACCGTTGCTCAGAACGAAGAGTGCA
TGCTCTGGCCCGGCACTCACGTGTGTAACGGATGCAGGGCGTTTTTGTCC
GATAATGTTGTTGTCGCTGTTGGTTTCCCAAGTGCTGTATTTGTACGGGC
CTTTAAAACGTGGTTGAGACGACGCTGCAGCTCCTGCTGCTGTTACTGCT
GCTGCTGACTGCCCTGCACCTTTTTCCTCGTTTGCCGCTGATGGCACGCG
TGTCCAATATAATATCTCTCCTTTGCTCGTCCGTCCATAGATTTTATCTC
GGCTACATGCCACCTGCATCACTGCCTGTGCCGCTCCAAACCATCCACCC
TTCGCCTCATGCAACGTACTGGTGATCACCATCGCTCCTCCGGTCGGACC
TCCCTCCCCCAAGCCCGAGCACAGATAAACGTTTCCATTCTTGGCTACCG
CTGCCCAAGCAGGACCGAAGCTCACACTGTCAATCGGGCTGGGTGGGCCA
GGAAAAACGACTTCTTTGGGCACTCCAACCACGGTCTCCTTGAAACCTCG
CCCGCTCTCTGAACCTGTCACGTAAAGGGTTTGGGGCGTGCTTTTGGAAG
GGGCGCAGAATGAGGCGGAAGACGAATTACTGTGAAAACTCTTGGGCTCA
GAAGAGGCCAGGTAGAGCAGAGAAGCGATAGCCGTGGCAGCGGCTGTAAC
GGCAGCCGGGGTGCTGGAGGAGGAGGAGTAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAAGACCAGGCGCGCCGTGGAAAAGTGGACGAATTCGTCATA
CACGCAGCAGTTCGGGCCCACGAGCGCCTTAATAAGAGGGTCGAAGCGGA
CATGGCTGTGTCATGGGTGTGTATGTAGCGTATGGGGGGTTGTGGAGTTG
AGAAATATAGACGCCACGCACGTGAGAATGGGAGTGGACTTGAGGCACGG
TTGGGAATGGTATAGGCGCGATGTGCCTCATAGCGAGGACTAACAATGAT
TTTTGTTTAAACATCAGTCATTGTGACGGTCAGTCTAGGGACTTTGTCTT
GTGGGAGGGGCTGTTGGCGCGTTGTGAA back to topCoding sequence (CDS) from alignment at chr15:741155..744682- >NO15G02710.1 ID=NO15G02710.1|Name=NO15G02710.1|organism=Nannochloropsis oceanica|type=CDS|length=1026bp|location=Sequence derived from alignment at chr15:741155..744682- (Nannochloropsis oceanica)
ATGCGCCGCCCGCCAGGCCGGGTGCCGGTGCATTACCTGCTCATGCTTGT
CGCCATAATTACGACGATGCTCCTACGTGCGTCGCACGGCTTTCCCATCG
TCTTTTCTGCTACTTCGCTTAGACATGCCCGGCGTTTTTTTTCATTGAAA
GCCGTGAATCGCATGACCTCATCTATGCTCGAGATCCAAGACGTGACGCT
GCCGGGCGAACCCACGCGCGAGGTCCATGTGCTCGACACAGGGCCGTGCA
CAGGTAGACCTATCGCACCCCCCATCATCCTAATCGGGGGGACGGCCCAA
GTAATCACCAGTTGGCAAGGCCACATTCAAGCCTTAGGCAAAAATCGACG
TCTTATTATATATGAGGCCCGGGGCCAAGGCCGCCGGACCCTTTTGGATT
TGACCCAAGCGTCCCTGGGCACCCACATAGAGGATTTTCGCCGCATCCAC
GCCGCTCTCCAACTCAATGGTCCTGTTGACTTATGTGGCTTCAGCTTTGG
CGGCCGTGTCAGCCTTGGCGTGGCCGCGCAAGCCCCCGAGTTGGTGCGTC
GCTTGGTGCTGACGGGTGTGCCTGCTGAGCGCGACGCGGTGGGAAGACTT
ATCCTACAGTCGTGGAAAGCAGCCCTCAGACGAGGAAGCCTGCATGAGTT
CGCCTGGAACTCCATGCTTGCCTGTCATGGACCCGCCTTCCTGACCAAGA
ACGAGAAGAAGATCCCTGAATGGGTTGACTTCATCTACCGATCCAACACC
GTGGAGGGGATTCTATCCATTGTCGAACAGTCACAGGTATATGATGTGCA
AGACCCTATGCATACCCTCCAGCTGGCCAAGCAAGTGGTGGCTCCCACCC
TCCTTCTGGGGGGGGATGAGGACAGAGTGGCCAGTGCCTTAGAGATCGAA
CGGTTAGCGGCCGAGGCGGGCAAGGGGTGGGATGTTGTTTTGTTCGAAGG
AGCGAATCACAATTGTGTGTTTGAAACGCCAGTTGCGTGGGCGAAAGAGG
TGGTGCGGTTTCTCAGCGAGGGTTAG back to top
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