NO15G02650.3, NO15G02650.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G02650.3
Unique Name	NO15G02650.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5066
Alignment location	chr15:725004..731172 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:725004..731172 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G02650.3 vs.
Match: EWM22342.1 (Argo-Piwi [Nannochloropsis gaditana])

HSP 1 Score: 1118.2 bits (2891), Expect = 0.000e+0
Identity = 567/751 (75.50%), Postives = 634/751 (84.42%), Query Frame = 0

Query:   61 TSLDGKKVLYQYDVCITEDNGRPIDKLPMAKARVIVAAAIAQAEGAGVAKLPVAFDGQKNLFTINNTTLGGTRTLTARLEVVRGPAGAKGKAAEKSFDEYQVKIQVVGERRMSEIVNYVEGRDASAKPQDAINALDVVLKEEALKQYKEIGRSKFFSPLNPDKIFNGLFHAYRGFFQSLRPTQSGLTLNVDQAVAAVMREQPLVEFVAALLGMQGPPSGKLDDRQAKAVSKAVKRLKVEVTHRGGGRVYTIMGLSPLPANATKFMNEEVKAEQTIQAYFQSKYGKQLRFPFLHCVRMGSKRRPTYFPIEVCKVVAGQRIPNQFVPNVAADIVDIAAVPPSNRFNKVYTQVQAMAAGSGGAEGLASSFGLKLEPKVVRVKGRFLPGPKVTVKGSNGQPLTEQVSGGIWTLMRKYFYASAALEEWAIVSFVSKRRLSDQDVQAYADGLRDALNKTGVRAPPPSTIIFAEDQHDTVSNCLRLALKSGK-----------IQLIVCCIEKEVPIYTEVKRAAETVHGVMTQCVVRDNVRKCNFMTNVNISIKVNEKLGGMNCIVAKEHMQYIQKNRVMIFGADVNHARVGSMRPSFAAVAGSLDGDARKHAAVLQAQSPRLEIIQDLSNMVQKLLLKFHASTKSLPHRIIFYRDGVSEGQFKEVLQYEVPAIKAACLRINPKYNPTLTFIVVQKRHNTRFFTPDIKCQDGKSGNVQAGLVVDTGVCHPIEYDFFLLSHAGLKGTSKPSYYRVGRE 801
            TSLDG KVLYQYDV I E +G+PIDKLP  K+R+I+ AA+AQA    +  LPVA+DGQKNLFT+N+T LGGTRTLTARLE  +G    K K  E+S DEY+V++Q+VGERRM++IV+YV+GRD SA+PQD INALDVV+KEEALK Y EIGR+KFFSP NP  IFNGLFHAYRGFFQSLRPTQSGLTLNVDQAVAAVMR+QPL EFV ALL M  PP  +LD+RQA+AVSKAVK LK+EVTHR  GR YT+MGLSP PA+  +FMNEEV AEQTI AYFQSKY KQLR+P LHCVRMGSKR+PT+FPIEVCKVVAGQRIP QF+PNVAADIVDIAAVPPSNRFNKVY QVQA+AA       LA+ FGLKLEPKV+RVKGRFLP P+VTVKG NG+ LTEQ SGG+W+L++K FY+ A+L  W++VSF  + RL DQ V  Y DGLRDAL KTGVRAPPP  +IFAED+ DTVSNCLR  L+ G             QL+VC IEKEVPIYTEVKRAAETVHGVMTQCV RDNVRKCNFMTNVNIS+KVNEKLGG+N IVAKEHM YIQKNRVMI GADVNHARVGSMRPSFAAV GSLD DAR+H AVLQAQSPRLEIIQDLSNMVQKLLLKFH +T SLPH++IFYRDGVSEGQFKEVLQYEVPA+K+AC RIN KY P+LTFIVVQKRHNTRF   +   QDGKSGN+++GLVVD GVCHP EYDFFLLSHAGLKGTSKPSYYRV R+
Sbjct:   10 TSLDGNKVLYQYDVAIAEASGQPIDKLPALKSRMILKAALAQARSPDIPALPVAYDGQKNLFTVNDTVLGGTRTLTARLER-KGGGKKKKKEEEQSLDEYRVQVQMVGERRMTDIVDYVQGRDTSARPQDMINALDVVMKEEALKLYVEIGRAKFFSPENPATIFNGLFHAYRGFFQSLRPTQSGLTLNVDQAVAAVMRDQPLEEFVGALLHMDAPPR-RLDERQARAVSKAVKGLKIEVTHRSSGRTYTVMGLSPQPADQIRFMNEEVGAEQTIAAYFQSKYKKQLRYPSLHCVRMGSKRKPTFFPIEVCKVVAGQRIPEQFIPNVAADIVDIAAVPPSNRFNKVYKQVQAIAASGK----LAAQFGLKLEPKVLRVKGRFLPSPRVTVKGFNGRELTEQTSGGVWSLIKKIFYSPASLSHWSVVSFCGRHRLDDQTVGNYIDGLRDALGKTGVRAPPPEKVIFAEDKQDTVSNCLRKVLRYGPGEKQGDPSKVVTQLVVCLIEKEVPIYTEVKRAAETVHGVMTQCVTRDNVRKCNFMTNVNISLKVNEKLGGINSIVAKEHMSYIQKNRVMILGADVNHARVGSMRPSFAAVTGSLDADARRHTAVLQAQSPRLEIIQDLSNMVQKLLLKFHKTTGSLPHKLIFYRDGVSEGQFKEVLQYEVPAVKSACSRINSKYEPSLTFIVVQKRHNTRFNGVERAEQDGKSGNLKSGLVVDAGVCHPFEYDFFLLSHAGLKGTSKPSYYRVLRD 754

The following BLAST results are available for this feature:

BLAST of NO15G02650.3 vs.

BLAST of NO15G02650.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22342.1	0.000e+0	75.50	Argo-Piwi [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G02650	NO15G02650	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02650.3	NO15G02650.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02650.3.cds1	NO15G02650.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02650.3.cds2	NO15G02650.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02650.3.cds3	NO15G02650.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02650.3.cds4	NO15G02650.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02650.3.cds5	NO15G02650.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02650.3.cds6	NO15G02650.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:725004..731172+
coding sequence from alignment at chr15:725004..731172+

mRNA sequence

>NO15G02650.3 ID=NO15G02650.3|Name=NO15G02650.3|organism=Nannochloropsis oceanica|type=mRNA|length=5066bp
GGGGGGGGCACCGCGGGCGGAAGAGTTTATGCGGGATATCCAGTTCTTCG
ATTCGGGGGTGACGGAAGGGCAGGCGAGTGCGGAATTGGTTGATCGCCTA
ACGGCCGTTTGTTTAACCGACGTGGAAACGGACGCGATTGCGTTGCCTGT
CCGGCCACGGGTAGGGACGAAGGGAACTCCCGTGACGGTGTTGACGAACC
ATTTTAAGACCTCGCTGGATGGGAAGAAAGTGTTGTATCAATACGACGTT
TGCATTACCGAGGACAATGGGCGGCCGATTGACAAGTTGCCCATGGCGAA
GGCACGCGTAATTGTGGCCGCTGCCATCGCTCAGGCCGAGGGGGCAGGGG
TCGCCAAGTTGCCCGTGGCTTTTGATGGACAGAAGAATCTGTTTACCATT
AATAACACCACCCTGGGAGGGACCCGGACATTGACTGCACGCTTGGAGGT
TGTGCGTGGGCCGGCGGGGGCAAAGGGGAAAGCGGCGGAGAAGAGCTTCG
ATGAATACCAGGTGAAGATACAAGTAGTAGGGGAACGACGCATGTCGGAG
ATTGTAAATTATGTCGAGGGGCGGGACGCGTCGGCTAAGCCGCAGGACGC
CATCAATGCCTTGGACGTGGTGCTGAAGGAGGAGGCGCTGAAGCAATACA
AGGAGATTGGTCGTTCGAAATTTTTCTCTCCCCTGAATCCGGACAAGATT
TTCAACGGGCTTTTCCACGCCTATCGGGGTTTTTTCCAGTCGTTGCGTCC
GACCCAATCGGGACTAACCCTGAATGTCGACCAAGCCGTCGCGGCGGTGA
TGCGTGAACAGCCCCTGGTGGAGTTTGTGGCGGCCTTGTTGGGCATGCAG
GGCCCACCCTCGGGAAAGCTGGACGACCGGCAAGCAAAGGCGGTCTCCAA
GGCCGTGAAACGGTTGAAGGTGGAAGTTACCCACCGAGGGGGTGGGCGCG
TCTACACCATCATGGGCTTATCGCCCCTCCCCGCGAACGCCACCAAGTTT
ATGAACGAGGAGGTAAAGGCGGAGCAGACTATCCAAGCGTACTTCCAGAG
CAAGTATGGAAAACAGCTTCGCTTTCCCTTCCTTCACTGCGTCCGAATGG
GCTCCAAGCGTCGTCCTACCTACTTCCCAATTGAGGTCTGCAAGGTGGTG
GCCGGCCAGCGCATCCCCAATCAGTTCGTTCCCAACGTGGCGGCGGACAT
CGTTGACATTGCGGCTGTCCCCCCCTCGAATCGCTTCAATAAAGTGTACA
CGCAAGTGCAGGCGATGGCGGCCGGGAGCGGGGGTGCGGAAGGCTTGGCG
TCGTCGTTTGGTTTGAAATTGGAACCGAAGGTGGTGCGGGTGAAGGGCCG
CTTTTTACCGGGACCCAAGGTGACGGTCAAGGGCTCCAATGGCCAACCCC
TCACGGAGCAAGTCTCCGGGGGCATTTGGACGCTCATGCGCAAGTATTTC
TACGCCTCGGCCGCCCTCGAAGAATGGGCCATCGTGTCCTTCGTGAGCAA
GCGGCGATTAAGCGATCAAGACGTGCAGGCATATGCCGACGGTCTCCGGG
ACGCCCTCAACAAGACGGGCGTGCGTGCCCCGCCGCCCTCGACGATTATT
TTCGCGGAGGACCAGCATGACACCGTCTCGAACTGCTTGCGGCTTGCACT
AAAATCTGGAAAAATCCAATTAATCGTGTGTTGCATCGAGAAGGAAGTGC
CGATCTACACGGAGGTGAAACGGGCAGCGGAAACGGTGCATGGCGTCATG
ACGCAGTGCGTGGTGAGGGACAACGTTCGCAAGTGCAACTTCATGACCAA
CGTGAATATTTCCATCAAGGTGAACGAGAAGCTGGGCGGGATGAACTGTA
TCGTTGCCAAGGAACACATGCAATACATTCAGAAGAACCGTGTCATGATA
TTCGGTGCAGACGTGAACCACGCTAGGGTCGGGTCGATGCGACCGTCTTT
CGCCGCCGTGGCGGGCTCGCTGGATGGGGATGCGCGCAAGCACGCGGCGG
TGTTGCAGGCACAGTCGCCTCGGTTGGAGATTATTCAGGACCTCTCCAAC
ATGGTCCAGAAGCTGCTCCTCAAATTCCACGCCTCGACTAAGTCCCTCCC
CCATCGGATTATCTTCTACCGTGACGGGGTCTCCGAAGGCCAGTTCAAGG
AGGTGCTGCAGTACGAGGTGCCCGCCATCAAGGCCGCCTGCCTTCGCATC
AACCCCAAGTACAACCCTACCTTGACCTTTATCGTCGTTCAGAAGCGTCA
CAACACTCGCTTCTTCACCCCCGATATCAAATGCCAGGACGGGAAGAGTG
GGAATGTCCAAGCGGGCCTGGTGGTGGACACGGGCGTGTGCCACCCCATC
GAGTACGATTTCTTCCTCCTCTCCCACGCGGGATTGAAAGGCACCAGCAA
ACCCTCGTATTATAGGGTAGGGAGGGAGGGACGGACGGACGGAGAGATAG
CATCTTGCTGGTGACTGGGGGGGCGCTGTTACGTGCTTGAGATTTGTGTC
GTGGGGATCCGCGGTTTTTCACCCTCCCTCACTCCCTCCCTTCCTCCCTC
CCTCCCTTCCTTCCTCACTCCCCAGGTCCTCCGTGACGAAGCTAAGATGG
GCCCGGACGAGTTGCAGCTGCTCACGTACTTCCTCTGCCACAACTATGCT
CGCTGCACCCGCGCCGTGTCCATGGTGCCTGCGGTGTACTATTCACATTT
GGCGGCGAAACGGGCGCAGATCTTTTTAACGGACGAGGCGTTATCCAGCG
AAACGGGGACGGAATTGTCGGGGGGGATGGATGAGGAGGAAATGGATATG
TACGCAGATGTGAATTGGGATAATAAGATGATCCCGATTAAGTCGACCGT
GATCGATAAGATGTGGTTTTTGTAAGTAGAGATGGAGGGAGGGAAGGAGG
GATATAGGGGGGAAATGTATCAAGTGTTCTGGTGAAAAATGGAGGAAGAA
GAAGGGAGGAAGTGGACGTACAATGATGTCATGAAGAGGAACATAGAGAG
AAAGGGATCAAGACACAAAAAGAGGAAGAGGAAAGAAAGAAAGAAAAGAG
ACATCCACAGAGAGAGTCACACAAAAAGAGAGACGGAGAGGCAGAGGCCA
TGCCGAATGCATGCGATCGTTCGCATACAAAGGCCGGTGGGCCACGCACA
AATAGAGCCGAAGGGACAACGAATCGAAAGCCAGGCATGTTTTCATGGTC
CATCTTTTTGCGTTTCTTCTTGTCAAGGGTGACAGCGGGGGTTGGTTGGC
CTTAGCCCAGGCGCATGTAACACATGGTAATTCCTGTGGAGAGAACGGAT
TAAGAGACGTTCCAGTTACACACACACGCACGCTCGTGTAGTCAGTCACT
GTTGGAGCTTCTCATTCACCCTCTTGCAATTGCGTTATATTTTTGATTTA
GTTGGGCGCTAACAAATGCGATATTTTTCTGATAAAAGTTTGGCGCTTGC
AATTGCAATATTTCTCTGATAAAGTCGGGCGTTTCTCCGATACAGGGATG
TGAGCCATTTTTCCGTGAGTCTTTTTTGTCGTGAACCGGCGGTCTTGCGC
TTTTTCTTTTTTTTCCTCTCATTGCCTCTTCCTTTTCCTTTTTACGTTTT
GTTGCTTCAGCTGATAGTAATGCTTTTCCCCGCTTCCTTTTCCTCCTGCT
TACTCTCGCCCAGCCTGTCCCATCTCCCGGAGGCGGTGGTGGATCTCTTT
ATTCTTACACGGCATCCCACTCTTGACGAAAGTCTTTTCAGTGGCCTGTG
TCTCATTCACCGACGCGGTCGTGTTTTGTCCTATCTCCTCTCCCTGCTCG
CCTCGACCTGCTCTATCCGCTTCATCTCGAGTCTGTTGTTCGGGCTGCTG
CTGCTGCTGCTGTACGTCGCCTCGCTGTTCTTGCGGTAACCGCTGCTCCC
CTTGCTGCCGCTGTCCCTGGTCTCGATACTGCTGCTGCTGGTCCTGGTAC
TGGTCCTGGTGTTGGCCCTCTGGATGCTCACCCTCCTGCTGCTGCTGCCC
AGGGCGGACGCGGGTAGGAGGGTAAGGAACAAGCAAGCCCCCAGAGGACT
CCTGCAGGGTCGCGTTGCTTCCCATGCGCGGCAAGAATTCTCTTGGCTTC
TCCTCATCAAAGACGTTTGGCGCCGTGAGGTTGTACAAAGCATTTGGTGT
GGTGACATAGCTGAGGCTCACATTCGGTCGTCCCTCGACCACGGGCATGA
TAAACCCGAAGCGCTGGCTTTCGTTCGGATGCAAGAAACCGCCACGCAAG
GGCAGGTATGTAGCGTTGGTCGCAGGATCATACACCAACTGCCACGTGCC
AGTAGTCGAAGTGATGTTTTGCACATCCACGCCCACGGCGCTCAAAGGAT
AAGAACCCATGTTCGTCACGCGGCCACTCCAAATCACGTAGCGCTGGTCC
CTCCAGTAGCTCTCCTTCACATCTTCCTCCACCAGCACCGCATCGGTCCC
ATCAGGGTTTGGAGGGGAGGGAATAATAGAGGTAAAGTTAAAAAATCGTC
CGTCGCCGGTTTGCCCGTAAAGAGGTTCTACCTCGGCAAAGCTTGGCCGG
TTCGTGTTCTGAATGAAACCAAATATCCATTTATCGCCTTGGCGAAGGGG
TGCGCGGTACTTGGGCAGATACTGGTAGGTTTCATTGCTGTCCAAGGTGT
TTAAGCCCCAGAAGGAGGAAGAAATGTTGAAGTCCTCAATCTTGATCGCA
AGCTGTGTCACGTCCCCTGGACCCTCGTTCAACACGCTCACTTTATATAT
TTGAGTGCTGCCACTAGAAGGCGTGGTAAAATTGCCGAAGGCGTCATAGT
TTACAAAGAGGGTAGGACGGATATGCAAGATCTCATCCACAGTTCTATCG
CCCTGCCGTGCAGCAAACGTTGTGTTGAAAACTGTGGGAAAGGTGCTCAG
GTCTTCCATGGCGCCCCACTGAGTCAAGGGCGGTTGTTGCTGTTCTTGGC
CTTGGCCGTTGACGACAAAACCGACAAGCCAGAGCAAAAGATACTTGAAA
AGGGAGGGGCGGTGGTGCATATTGCTTGAAAAGTGGTGAGGCAGTGCTGT
GGCGGTAGATTGGCTG

protein sequence of NO15G02650.3

>NO15G02650.3-protein ID=NO15G02650.3-protein|Name=NO15G02650.3|organism=Nannochloropsis oceanica|type=polypeptide|length=812bp
MRDIQFFDSGVTEGQASAELVDRLTAVCLTDVETDAIALPVRPRVGTKGT
PVTVLTNHFKTSLDGKKVLYQYDVCITEDNGRPIDKLPMAKARVIVAAAI
AQAEGAGVAKLPVAFDGQKNLFTINNTTLGGTRTLTARLEVVRGPAGAKG
KAAEKSFDEYQVKIQVVGERRMSEIVNYVEGRDASAKPQDAINALDVVLK
EEALKQYKEIGRSKFFSPLNPDKIFNGLFHAYRGFFQSLRPTQSGLTLNV
DQAVAAVMREQPLVEFVAALLGMQGPPSGKLDDRQAKAVSKAVKRLKVEV
THRGGGRVYTIMGLSPLPANATKFMNEEVKAEQTIQAYFQSKYGKQLRFP
FLHCVRMGSKRRPTYFPIEVCKVVAGQRIPNQFVPNVAADIVDIAAVPPS
NRFNKVYTQVQAMAAGSGGAEGLASSFGLKLEPKVVRVKGRFLPGPKVTV
KGSNGQPLTEQVSGGIWTLMRKYFYASAALEEWAIVSFVSKRRLSDQDVQ
AYADGLRDALNKTGVRAPPPSTIIFAEDQHDTVSNCLRLALKSGKIQLIV
CCIEKEVPIYTEVKRAAETVHGVMTQCVVRDNVRKCNFMTNVNISIKVNE
KLGGMNCIVAKEHMQYIQKNRVMIFGADVNHARVGSMRPSFAAVAGSLDG
DARKHAAVLQAQSPRLEIIQDLSNMVQKLLLKFHASTKSLPHRIIFYRDG
VSEGQFKEVLQYEVPAIKAACLRINPKYNPTLTFIVVQKRHNTRFFTPDI
KCQDGKSGNVQAGLVVDTGVCHPIEYDFFLLSHAGLKGTSKPSYYRVGRE
GRTDGEIASCW*

mRNA from alignment at chr15:725004..731172+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G02650.3 ID=NO15G02650.3|Name=NO15G02650.3|organism=Nannochloropsis oceanica|type=mRNA|length=6169bp|location=Sequence derived from alignment at chr15:725004..731172+ (Nannochloropsis oceanica)
GGGGGGGGCACCGCGGGCGGAAGAGTTTATGCGGGATATCCAGTTCTTCG
ATTCGGGGGTGACGGAAGGGCAGGCGAGTGCGGAATTGGTTGATCGCCTA
ACGGCCGTTTGTTTAACCGACGTGGAAACGGACGCGATTGCGTTGCCTGT
CCGGCCACGGGTAGGGACGAAGGGAACTCCCGTGACGGTGTTGACGAACC
ATTTTAAGACCTCGCTGGATGGGAAGAAAGTGTTGTATCAATACGACGTT
TGCATTACCGAGGACAATGGGCGGCCGATTGACAAGTTGCCCATGGCGAA
GGCACGCGTAATTGTGGCCGCTGCCATCGCTCAGGCCGAGGGGGCAGGGG
TCGCCAAGTTGCCCGTGGCTTTTGATGGACAGAAGAATCTGTTTACCATT
AATAACACCACCCTGGGAGGGACCCGGACATTGACTGCACGCTTGGAGGT
TGTGCGTGGGCCGGCGGGGGCAAAGGGGAAAGCGGCGGAGAAGAGCTTCG
ATGAATACCAGGTGAAGATACAAGTAGTAGGGGAACGACGCATGTCGGAG
ATTGTAAATTATGTCGAGGGGCGGGACGCGTCGGCTAAGCCGCAGGACGC
CATCAATGCCTTGGACGTGGTGCTGAAGGAGGAGGCGCTGAAGCAATACA
AGGAGATTGGTCGTTCGAAATTTTTCTCTCCCCTGAATCCGGACAAGATT
TTCAACGGGCTTTTCCACGCCTATCGGGGTTTTTTCCAGTCGTTGCGTCC
GACCCAATCGGGACTAACCCTGAATGTCGACCAAGCCGTCGCGGCGGTGA
TGCGTGAACAGCCCCTGGTGGAGTTTGTGGCGGCCTTGTTGGGCATGCAG
GGCCCACCCTCGGGAAAGCTGGACGACCGGCAAGCAAAGGCGGTCTCCAA
GGCCGTGAAACGGTTGAAGGTGGAAGTTACCCACCGAGGGGGTGGGCGCG
TCTACACCATCATGGGCTTATCGCCCCTCCCCGCGAACGCCACCAAGTTT
ATGAACGAGGAGGTAAAGGCGGAGCAGACTATCCAAGCGTACTTCCAGAG
CAAGTATGGAAAACAGCTTCGCTTTCCCTTCCTTCACTGCGTCCGAATGG
GCTCCAAGCGTCGTCCTACCTACTTCCCAATTGAGGTCTGCAAGGTGGTG
GCCGGCCAGCGCATCCCCAATCAGTTCGTTCCCAACGTGGCGGCGGACAT
CGTTGACATTGCGGCTGTCCCCCCCTCGAATCGCTTCAATAAAGTGTACA
CGCAAGTGCAGGCGATGGCGGCCGGGAGCGGGGGTGCGGAAGGCTTGGCG
TCGTCGTTTGGTTTGAAATTGGAACCGAAGGTGGTGCGGGTGAAGGGCCG
CTTTTTACCGGGACCCAAGGTATGTGTATATACGTATACGTAATCTTAAT
ATAATATGTATATTAAGAAAGGGGTAGAGGGAGGGAGAGGGAGGGAGGAA
AGTTTTGAGAAGGGTGGTGTGGTCGTAGTGTCTTTTGTTTCGGTCTCGTT
TCTCCTTTCCTTGTCATCCCTCGTCTTCTCTTCTCCCTTGTCATACGCGG
CTTCTCATGGATACATGCACATATGCATGAAACGAAACAGTGGAATAACT
CCTACCCTTCCCATCCCCCCTCCTTCCCTTCCTCCCTCCCTCCCCAGGTG
ACGGTCAAGGGCTCCAATGGCCAACCCCTCACGGAGCAAGTCTCCGGGGG
CATTTGGACGCTCATGCGCAAGTATTTCTACGCCTCGGCCGCCCTCGAAG
AATGGGCCATCGTGTCCTTCGTGAGCAAGCGGCGATTAAGCGATCAAGAC
GTGCAGGCATATGCCGACGGTCTCCGGGACGCCCTCAACAAGACGGGCGT
GCGTGCCCCGCCGCCCTCGACGATTATTTTCGCGGAGGACCAGCATGACA
CCGTCTCGAACTGCTTGCGGCTTGCACTAAAATCTGGAAAAATCCAATTA
ATCGTGTGTTGCATCGAGAAGGAAGTGCCGATCTACACGGAGGTGAAACG
GGCAGCGGAAACGGTGCATGGCGTCATGACGCAGTGCGTGGTGAGGGACA
ACGTTCGCAAGTGCAACTTCATGACCAACGTGAATATTTCCATCAAGGTA
GGGAAGGAGGGAGGGAAGGAGAGATGTTGCTAAGTCTGCCATGAGCTGTT
TCATGGTCCTCTATTTCTAAAACTATTGAGATATCAACCATTCAACCCAC
CACTGCCCTCCCTCTCTCCCTCCCTCAATTCACCGATGTCCCTCCCTTCC
CCTCCTCCCTCCCCCCTTCCCCCATCTCCAGGTGAACGAGAAGCTGGGCG
GGATGAACTGTATCGTTGCCAAGGAACACATGCAATACATTCAGAAGAAC
CGTGTCATGATATTCGGTGCAGACGTGAACCACGCTAGGGTCGGGTCGAT
GCGACCGTCTTTCGCCGCCGTGGCGGGCTCGCTGGATGGGGATGCGCGCA
AGCACGCGGCGGTGTTGCAGGCACAGTCGCCTCGGTTGGAGATTATTCAG
GTTGGGCTGTGGGGGGAGGGGGGGGCTGAGAGGGAGGGGAAAATGGAGGG
AGGATAGGAGAGGGTAGGAAAGAGGGAGAGAGGGAGGGAGGGAGGAAGGG
GGGGGGGGAAGAGCTGTCCCACCGGTGATCTGCTTTCATTCTTTCTTCTT
TCTATGCAGGTTTTCACCCATGCCCGCCCGCTAATCATTTCCCCCATCCA
TCCCTCCTTCCCTCCTCAGGACCTCTCCAACATGGTCCAGAAGCTGCTCC
TCAAATTCCACGCCTCGACTAAGTCCCTCCCCCATCGGATTATCTTCTAC
CGTGACGGGGTCTCCGAAGGCCAGTTCAAGGAGGTGCTGCAGTACGAGGT
AAGCCCCGCCCTCCCCACCCTCTTTCCCTCCCTCCCTGTCTCCCTTTCAT
CGTCTTGTATTTTGATACCATGACGGTTTGGACAGAACGAGATATTTCCC
TCCCTCCCTCCCTCCCCTTTATCGTCAGGTGCCCGCCATCAAGGCTGCCT
GCCTTTGCATCAACCCCAAGTTCAACCCTACCTTGACCAACATCATCATC
TCACCCCTCCTCCTCCCTTTATCTTCAGGTGCCCGCCATCAAGGCCGCCT
GCCTTCGCATCAACCCCAAGTACAACCCTACCTTGACCTTTATCGTCGTT
CAGAAGCGTCACAACACTCGCTTCTTCACCCCCGATATCAAATGCCAGGA
CGGGAAGAGTGGGAATGTCCAAGCGGGTATGGGAGGGCGGGAGTGAGGGA
GGGAGGGAGGGAGGGGAGGAAGAAGGTGAAGATGGAGACGTGTGTATATA
TGTTGTTCTCTCTTGACTTGCCAACGTATCATGTGCCGGCACACATAATA
TGAAAACCCACGTCTTCGCTCACCCCCCCCACACCTCCCTCCCTCCCTCC
TCCCTCCCTCCCTCGTAGGCCTGGTGGTGGACACGGGCGTGTGCCACCCC
ATCGAGTACGATTTCTTCCTCCTCTCCCACGCGGGATTGAAAGGCACCAG
CAAACCCTCGTATTATAGGGTAGGGAGGGAGGGACGGACGGACGGAGAGA
TAGCATCTTGCTGGTGACTGGGGGGGCGCTGTTACGTGCTTGAGATTTGT
GTCGTGGGGATCCGCGGTTTTTCACCCTCCCTCACTCCCTCCCTTCCTCC
CTCCCTCCCTTCCTTCCTCACTCCCCAGGTCCTCCGTGACGAAGCTAAGA
TGGGCCCGGACGAGTTGCAGCTGCTCACGTACTTCCTCTGCCACAACTAT
GCTCGCTGCACCCGCGCCGTGTCCATGGTGCCTGCGGTGTACTATTCACA
TTTGGCGGCGAAACGGGCGCAGATCTTTTTAACGGACGAGGCGTTATCCA
GCGAAACGGGGACGGAATTGTCGGGGGGGATGGATGAGGAGGAAATGGAT
ATGTACGCAGATGTGAATTGGGATAATAAGATGATCCCGATTAAGTCGAC
CGTGATCGATAAGATGTGGTTTTTGTAAGTAGAGATGGAGGGAGGGAAGG
AGGGATATAGGGGGGAAATGTATCAAGTGTTCTGGTGAAAAATGGAGGAA
GAAGAAGGGAGGAAGTGGACGTACAATGATGTCATGAAGAGGAACATAGA
GAGAAAGGGATCAAGACACAAAAAGAGGAAGAGGAAAGAAAGAAAGAAAA
GAGACATCCACAGAGAGAGTCACACAAAAAGAGAGACGGAGAGGCAGAGG
CCATGCCGAATGCATGCGATCGTTCGCATACAAAGGCCGGTGGGCCACGC
ACAAATAGAGCCGAAGGGACAACGAATCGAAAGCCAGGCATGTTTTCATG
GTCCATCTTTTTGCGTTTCTTCTTGTCAAGGGTGACAGCGGGGGTTGGTT
GGCCTTAGCCCAGGCGCATGTAACACATGGTAATTCCTGTGGAGAGAACG
GATTAAGAGACGTTCCAGTTACACACACACGCACGCTCGTGTAGTCAGTC
ACTGTTGGAGCTTCTCATTCACCCTCTTGCAATTGCGTTATATTTTTGAT
TTAGTTGGGCGCTAACAAATGCGATATTTTTCTGATAAAAGTTTGGCGCT
TGCAATTGCAATATTTCTCTGATAAAGTCGGGCGTTTCTCCGATACAGGG
ATGTGAGCCATTTTTCCGTGAGTCTTTTTTGTCGTGAACCGGCGGTCTTG
CGCTTTTTCTTTTTTTTCCTCTCATTGCCTCTTCCTTTTCCTTTTTACGT
TTTGTTGCTTCAGCTGATAGTAATGCTTTTCCCCGCTTCCTTTTCCTCCT
GCTTACTCTCGCCCAGCCTGTCCCATCTCCCGGAGGCGGTGGTGGATCTC
TTTATTCTTACACGGCATCCCACTCTTGACGAAAGTCTTTTCAGTGGCCT
GTGTCTCATTCACCGACGCGGTCGTGTTTTGTCCTATCTCCTCTCCCTGC
TCGCCTCGACCTGCTCTATCCGCTTCATCTCGAGTCTGTTGTTCGGGCTG
CTGCTGCTGCTGCTGTACGTCGCCTCGCTGTTCTTGCGGTAACCGCTGCT
CCCCTTGCTGCCGCTGTCCCTGGTCTCGATACTGCTGCTGCTGGTCCTGG
TACTGGTCCTGGTGTTGGCCCTCTGGATGCTCACCCTCCTGCTGCTGCTG
CCCAGGGCGGACGCGGGTAGGAGGGTAAGGAACAAGCAAGCCCCCAGAGG
ACTCCTGCAGGGTCGCGTTGCTTCCCATGCGCGGCAAGAATTCTCTTGGC
TTCTCCTCATCAAAGACGTTTGGCGCCGTGAGGTTGTACAAAGCATTTGG
TGTGGTGACATAGCTGAGGCTCACATTCGGTCGTCCCTCGACCACGGGCA
TGATAAACCCGAAGCGCTGGCTTTCGTTCGGATGCAAGAAACCGCCACGC
AAGGGCAGGTATGTAGCGTTGGTCGCAGGATCATACACCAACTGCCACGT
GCCAGTAGTCGAAGTGATGTTTTGCACATCCACGCCCACGGCGCTCAAAG
GATAAGAACCCATGTTCGTCACGCGGCCACTCCAAATCACGTAGCGCTGG
TCCCTCCAGTAGCTCTCCTTCACATCTTCCTCCACCAGCACCGCATCGGT
CCCATCAGGGTTTGGAGGGGAGGGAATAATAGAGGTAAAGTTAAAAAATC
GTCCGTCGCCGGTTTGCCCGTAAAGAGGTTCTACCTCGGCAAAGCTTGGC
CGGTTCGTGTTCTGAATGAAACCAAATATCCATTTATCGCCTTGGCGAAG
GGGTGCGCGGTACTTGGGCAGATACTGGTAGGTTTCATTGCTGTCCAAGG
TGTTTAAGCCCCAGAAGGAGGAAGAAATGTTGAAGTCCTCAATCTTGATC
GCAAGCTGTGTCACGTCCCCTGGACCCTCGTTCAACACGCTCACTTTATA
TATTTGAGTGCTGCCACTAGAAGGCGTGGTAAAATTGCCGAAGGCGTCAT
AGTTTACAAAGAGGGTAGGACGGATATGCAAGATCTCATCCACAGTTCTA
TCGCCCTGCCGTGCAGCAAACGTTGTGTTGAAAACTGTGGGAAAGGTGCT
CAGGTCTTCCATGGCGCCCCACTGAGTCAAGGGCGGTTGTTGCTGTTCTT
GGCCTTGGCCGTTGACGACAAAACCGACAAGCCAGAGCAAAAGATACTTG
AAAAGGGAGGGGCGGTGGTGCATATTGCTTGAAAAGTGGTGAGGCAGTGC
TGTGGCGGTAGATTGGCTG

Coding sequence (CDS) from alignment at chr15:725004..731172+

>NO15G02650.3 ID=NO15G02650.3|Name=NO15G02650.3|organism=Nannochloropsis oceanica|type=CDS|length=2436bp|location=Sequence derived from alignment at chr15:725004..731172+ (Nannochloropsis oceanica)
ATGCGGGATATCCAGTTCTTCGATTCGGGGGTGACGGAAGGGCAGGCGAG
TGCGGAATTGGTTGATCGCCTAACGGCCGTTTGTTTAACCGACGTGGAAA
CGGACGCGATTGCGTTGCCTGTCCGGCCACGGGTAGGGACGAAGGGAACT
CCCGTGACGGTGTTGACGAACCATTTTAAGACCTCGCTGGATGGGAAGAA
AGTGTTGTATCAATACGACGTTTGCATTACCGAGGACAATGGGCGGCCGA
TTGACAAGTTGCCCATGGCGAAGGCACGCGTAATTGTGGCCGCTGCCATC
GCTCAGGCCGAGGGGGCAGGGGTCGCCAAGTTGCCCGTGGCTTTTGATGG
ACAGAAGAATCTGTTTACCATTAATAACACCACCCTGGGAGGGACCCGGA
CATTGACTGCACGCTTGGAGGTTGTGCGTGGGCCGGCGGGGGCAAAGGGG
AAAGCGGCGGAGAAGAGCTTCGATGAATACCAGGTGAAGATACAAGTAGT
AGGGGAACGACGCATGTCGGAGATTGTAAATTATGTCGAGGGGCGGGACG
CGTCGGCTAAGCCGCAGGACGCCATCAATGCCTTGGACGTGGTGCTGAAG
GAGGAGGCGCTGAAGCAATACAAGGAGATTGGTCGTTCGAAATTTTTCTC
TCCCCTGAATCCGGACAAGATTTTCAACGGGCTTTTCCACGCCTATCGGG
GTTTTTTCCAGTCGTTGCGTCCGACCCAATCGGGACTAACCCTGAATGTC
GACCAAGCCGTCGCGGCGGTGATGCGTGAACAGCCCCTGGTGGAGTTTGT
GGCGGCCTTGTTGGGCATGCAGGGCCCACCCTCGGGAAAGCTGGACGACC
GGCAAGCAAAGGCGGTCTCCAAGGCCGTGAAACGGTTGAAGGTGGAAGTT
ACCCACCGAGGGGGTGGGCGCGTCTACACCATCATGGGCTTATCGCCCCT
CCCCGCGAACGCCACCAAGTTTATGAACGAGGAGGTAAAGGCGGAGCAGA
CTATCCAAGCGTACTTCCAGAGCAAGTATGGAAAACAGCTTCGCTTTCCC
TTCCTTCACTGCGTCCGAATGGGCTCCAAGCGTCGTCCTACCTACTTCCC
AATTGAGGTCTGCAAGGTGGTGGCCGGCCAGCGCATCCCCAATCAGTTCG
TTCCCAACGTGGCGGCGGACATCGTTGACATTGCGGCTGTCCCCCCCTCG
AATCGCTTCAATAAAGTGTACACGCAAGTGCAGGCGATGGCGGCCGGGAG
CGGGGGTGCGGAAGGCTTGGCGTCGTCGTTTGGTTTGAAATTGGAACCGA
AGGTGGTGCGGGTGAAGGGCCGCTTTTTACCGGGACCCAAGGTGACGGTC
AAGGGCTCCAATGGCCAACCCCTCACGGAGCAAGTCTCCGGGGGCATTTG
GACGCTCATGCGCAAGTATTTCTACGCCTCGGCCGCCCTCGAAGAATGGG
CCATCGTGTCCTTCGTGAGCAAGCGGCGATTAAGCGATCAAGACGTGCAG
GCATATGCCGACGGTCTCCGGGACGCCCTCAACAAGACGGGCGTGCGTGC
CCCGCCGCCCTCGACGATTATTTTCGCGGAGGACCAGCATGACACCGTCT
CGAACTGCTTGCGGCTTGCACTAAAATCTGGAAAAATCCAATTAATCGTG
TGTTGCATCGAGAAGGAAGTGCCGATCTACACGGAGGTGAAACGGGCAGC
GGAAACGGTGCATGGCGTCATGACGCAGTGCGTGGTGAGGGACAACGTTC
GCAAGTGCAACTTCATGACCAACGTGAATATTTCCATCAAGGTGAACGAG
AAGCTGGGCGGGATGAACTGTATCGTTGCCAAGGAACACATGCAATACAT
TCAGAAGAACCGTGTCATGATATTCGGTGCAGACGTGAACCACGCTAGGG
TCGGGTCGATGCGACCGTCTTTCGCCGCCGTGGCGGGCTCGCTGGATGGG
GATGCGCGCAAGCACGCGGCGGTGTTGCAGGCACAGTCGCCTCGGTTGGA
GATTATTCAGGACCTCTCCAACATGGTCCAGAAGCTGCTCCTCAAATTCC
ACGCCTCGACTAAGTCCCTCCCCCATCGGATTATCTTCTACCGTGACGGG
GTCTCCGAAGGCCAGTTCAAGGAGGTGCTGCAGTACGAGGTGCCCGCCAT
CAAGGCCGCCTGCCTTCGCATCAACCCCAAGTACAACCCTACCTTGACCT
TTATCGTCGTTCAGAAGCGTCACAACACTCGCTTCTTCACCCCCGATATC
AAATGCCAGGACGGGAAGAGTGGGAATGTCCAAGCGGGCCTGGTGGTGGA
CACGGGCGTGTGCCACCCCATCGAGTACGATTTCTTCCTCCTCTCCCACG
CGGGATTGAAAGGCACCAGCAAACCCTCGTATTATAGGGTAGGGAGGGAG
GGACGGACGGACGGAGAGATAGCATCTTGCTGGTGA

Synonyms

Publications