NO15G02640.1, NO15G02640.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G02640.1
Unique NameNO15G02640.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1613
Alignment locationchr15:719822..721681 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:719822..721681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G02640.1 vs.
Match: XP_005855027.1 (alpha beta hydrolase fold protein [Nannochloropsis gaditana CCMP526]; EKU21339.1 alpha beta hydrolase fold protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 265.8 bits (678), Expect = 2.900e-67
Identity = 132/233 (56.65%), Postives = 161/233 (69.10%), Query Frame = 0 
Query:  271 RKIRVLGHDWGAALAYLLSAEGSTSVGRIASIATLAVPHNPLPAFLAHPGQFVRSWYMIFMQLPFLPEYWFRLGGRFAGLHKLWRDWSPGYVLPPSLLASLHTTFSEPGVLVSAMQYYRANVPPMLQRLVRGKVEGWAGGEGGTEG------GFVVGVPTLGLVGKEDGCIASVLFDVAMGSVEGGGR-HHPLFSKAVQVAKVEGGGHFVHQERPKEVNALVLAWFERFGENG 497
            R + + GHDWGA LAY+L+ +GS    R+ S+ T+AVPH     FL HP QF+ SWYM+F+QLPFLPE+WFR GGRF GLH+LW  WSPGY LPPS LASLH TFSEPGVL+S+MQYYR NVP ML  +++    G   G  GTEG        VV  PTL L G  DGCI  VL+DVAMG    G R  HPLF   V+V K+EGGGHF+H+E+ +EVN L +AWF++  + G
Sbjct:    8 RDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIQLPFLPEFWFRAGGRFWGLHQLWGGWSPGYTLPPSHLASLHATFSEPGVLMSSMQYYRDNVPGMLLEILKA---GLGRGGSGTEGEEERKEASVVAAPTLALSGLNDGCIDPVLYDVAMGLPTDGMRVDHPLFPAGVRVMKLEGGGHFLHREKAEEVNDLAVAWFKKHSKMG 237
The following BLAST results are available for this feature:
BLAST of NO15G02640.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005855027.12.900e-6756.65alpha beta hydrolase fold protein [Nannochloropsis... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02640NO15G02640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G02640.1NO15G02640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G02640.1.cds1NO15G02640.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02640.1.cds2NO15G02640.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G02640.1 ID=NO15G02640.1|Name=NO15G02640.1|organism=Nannochloropsis oceanica|type=mRNA|length=1613bp
ATGGTCTCCTCCTCCCGCCCCAAGAAGAAGCCTTTCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCCCCACC
TTTTCTTTCCTCATCCTCCTTGTAGCCGTCGGCCTGAAGCTACTCTCCAT
GCTCCTCTTCCGTACTATGGGCCACACCCTCGATCGCTCCCTTCCCTCCC
ACCTCGCCGCTGATGCACACTCTCTGCTAGGTACTGACTTCGTTTTCCGT
GTGCCCGTGCGTCATCCTCACCCTCGCTCAGGACGAGGACGAGGACAAGG
AGGAGGGGAGAACGGCAAGGACGACGAGGAAAAGCTGCTCGTGACCGTCC
TGGTCAAGAAAGCCGTTCGCCCTCAACCACCAACGACAACAACAACAGCA
GCAGCAGCAAAAACTGGCAGGGGGAAAGAAAATGAAGAAGATGACCCTCC
CCTCATCCTCCTTTTGCACGGTTTCCCTGATGACGCGTCCACATTCCACG
CACAAATCCTCCCGTTTGCGACCGCGGGCTTCGACGTGGTCGTTCCTGTG
ATGCCGGGGTATGAGCCCAGTACGGCCCTCCTCCCTCCTGAGAGCTATAC
CTTGCCGTCACTCGCTTTGATGCTGGAGAATGTGGTTGAGTGGGCGGTGA
CAACTTCGTTTGTACACGCCGACGAGGATGGAGAGGAGGAGAAGGGAAAT
AATGCCGTTAAAGAGGAGAAGGAAAATGAGCAAAGGAAATGTAAATTACG
AAAAGGAGGGCGAAAAATCCGTGTCCTCGGGCATGATTGGGGCGCGGCGC
TGGCTTACCTTCTTTCGGCCGAAGGGAGTACGTCGGTAGGGAGAATAGCG
TCGATTGCCACGCTGGCCGTGCCGCATAATCCTCTACCTGCCTTCTTGGC
ACATCCAGGGCAGTTTGTGAGGAGCTGGTACATGATTTTTATGCAACTGC
CCTTCTTGCCCGAGTACTGGTTCCGGCTCGGTGGTCGATTTGCTGGTCTG
CACAAATTGTGGCGGGACTGGTCACCAGGATACGTCCTCCCTCCCTCCCT
CCTGGCCTCGCTCCACACGACCTTTTCGGAGCCCGGTGTGCTGGTGAGTG
CCATGCAGTATTATCGCGCCAATGTTCCGCCGATGCTGCAGCGTCTGGTG
AGAGGGAAGGTGGAGGGGTGGGCAGGGGGAGAGGGAGGGACGGAGGGAGG
ATTTGTAGTTGGGGTGCCCACGTTGGGGCTGGTGGGAAAGGAGGATGGAT
GTATTGCTTCAGTGCTCTTTGACGTGGCCATGGGAAGTGTGGAAGGAGGG
GGGCGGCACCACCCACTGTTTTCGAAGGCGGTCCAGGTGGCGAAGGTGGA
AGGAGGGGGGCATTTTGTGCACCAGGAGAGGCCGAAGGAGGTAAACGCCT
TGGTGTTGGCGTGGTTTGAGAGGTTTGGGGAAAACGGGACGGAGGAGAAA
TCCAGGAAAGGGGGGGGTGAAGGAGAAATTCTGACAGAAAATGCAGACAG
GTAAAGGTAGGGAGAAGGATAGAAGAAGAAACACATGCATGTAATGGAAT
TTGTCGCTTGTGC
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protein sequence of NO15G02640.1

>NO15G02640.1-protein ID=NO15G02640.1-protein|Name=NO15G02640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp
MVSSSRPKKKPFSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSFFFFPT
FSFLILLVAVGLKLLSMLLFRTMGHTLDRSLPSHLAADAHSLLGTDFVFR
VPVRHPHPRSGRGRGQGGGENGKDDEEKLLVTVLVKKAVRPQPPTTTTTA
AAAKTGRGKENEEDDPPLILLLHGFPDDASTFHAQILPFATAGFDVVVPV
MPGYEPSTALLPPESYTLPSLALMLENVVEWAVTTSFVHADEDGEEEKGN
NAVKEEKENEQRKCKLRKGGRKIRVLGHDWGAALAYLLSAEGSTSVGRIA
SIATLAVPHNPLPAFLAHPGQFVRSWYMIFMQLPFLPEYWFRLGGRFAGL
HKLWRDWSPGYVLPPSLLASLHTTFSEPGVLVSAMQYYRANVPPMLQRLV
RGKVEGWAGGEGGTEGGFVVGVPTLGLVGKEDGCIASVLFDVAMGSVEGG
GRHHPLFSKAVQVAKVEGGGHFVHQERPKEVNALVLAWFERFGENGTEEK
SRKGGGEGEILTENADR*
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mRNA from alignment at chr15:719822..721681+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G02640.1 ID=NO15G02640.1|Name=NO15G02640.1|organism=Nannochloropsis oceanica|type=mRNA|length=1860bp|location=Sequence derived from alignment at chr15:719822..721681+ (Nannochloropsis oceanica)
ATGGTCTCCTCCTCCCGCCCCAAGAAGAAGCCTTTCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCCCCACC
TTTTCTTTCCTCATCCTCCTTGTAGCCGTCGGCCTGAAGCTACTCTCCAT
GCTCCTCTTCCGTACTATGGGCCACACCCTCGATCGCTCCCTTCCCTCCC
ACCTCGCCGCTGATGCACACTCTCTGCTAGGTACTGACTTCGTTTTCCGT
GTGCCCGTGCGTCATCCTCACCCTCGCTCAGGACGAGGACGAGGACAAGG
AGGAGGGGAGAACGGCAAGGACGACGAGGAAAAGCTGCTCGTGACCGTCC
TGGTCAAGAAAGCCGTTCGCCCTCAACCACCAACGACAACAACAACAGCA
GCAGCAGCAAAAACTGGCAGGGGGAAAGAAAATGAAGAAGATGACCCTCC
CCTCATCCTCCTTTTGCACGGTTTCCCTGATGACGCGTCCACATTCCACG
CACAAATCCTCCCGTTTGCGACCGCGGGCTTCGACGTGGTCGTTCCTGTG
ATGCCGGGGTATGAGCCCAGTACGGCCCTCCTCCCTCCTGAGAGCTATAC
CTTGCCGTCACTCGCTTTGATGCTGGAGAATGTGGTTGAGTGGGCGGTGA
CAACTTCGTTTGTACACGCCGACGAGGATGGAGAGGAGGAGAAGGGAAAT
AATGCCGTTAAAGAGGAGAAGGAAAATGAGCAAAGGAAATGTAAATTACG
AAAAGGAGGGCGAAAAATCCGTGTCCTCGGGCATGATTGGGGCGCGGCGC
TGGCTTACCTTCTTTCGGCCGAAGGGAGTACGTCGGTAGGGAGAATAGCG
TCGATTGCCACGCTGGCCGTGCCGCATAATCCTCTACCTGCCTTCTTGGC
ACATCCAGGGCAGTTTGTGAGGAGCTGGTACATGATTTTTATGGTAGGTA
AGCGGGGGGGAGAGGGAGGGAGGGAGGGAAGAAAGGAGGGAGGGAGGGAG
GGAGGGAGGGTGAGTCTCTCTTGACTCTCTGCTTGCATGTCTGGTGCATT
CCCAGTGGTTTCGATTTATAGCTCTAATAAGAGAGGTGTGGAGTGGAGGG
CCCCTCTCCCCCTCCTCTCTTCACTCCCCTCCCTTGCTCCTTACCTGCTT
ATTAATTTCCTCTTTTTCCTTCCCTCCCTCCCTTCTCCAGCAACTGCCCT
TCTTGCCCGAGTACTGGTTCCGGCTCGGTGGTCGATTTGCTGGTCTGCAC
AAATTGTGGCGGGACTGGTCACCAGGATACGTCCTCCCTCCCTCCCTCCT
GGCCTCGCTCCACACGACCTTTTCGGAGCCCGGTGTGCTGGTGAGTGCCA
TGCAGTATTATCGCGCCAATGTTCCGCCGATGCTGCAGCGTCTGGTGAGA
GGGAAGGTGGAGGGGTGGGCAGGGGGAGAGGGAGGGACGGAGGGAGGATT
TGTAGTTGGGGTGCCCACGTTGGGGCTGGTGGGAAAGGAGGATGGATGTA
TTGCTTCAGTGCTCTTTGACGTGGCCATGGGAAGTGTGGAAGGAGGGGGG
CGGCACCACCCACTGTTTTCGAAGGCGGTCCAGGTGGCGAAGGTGGAAGG
AGGGGGGCATTTTGTGCACCAGGAGAGGCCGAAGGAGGTAAACGCCTTGG
TGTTGGCGTGGTTTGAGAGGTTTGGGGAAAACGGGACGGAGGAGAAATCC
AGGAAAGGGGGGGGTGAAGGAGAAATTCTGACAGAAAATGCAGACAGGTA
AAGGTAGGGAGAAGGATAGAAGAAGAAACACATGCATGTAATGGAATTTG
TCGCTTGTGC
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Coding sequence (CDS) from alignment at chr15:719822..721681+

>NO15G02640.1 ID=NO15G02640.1|Name=NO15G02640.1|organism=Nannochloropsis oceanica|type=CDS|length=1554bp|location=Sequence derived from alignment at chr15:719822..721681+ (Nannochloropsis oceanica)
ATGGTCTCCTCCTCCCGCCCCAAGAAGAAGCCTTTCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCCCCACC
TTTTCTTTCCTCATCCTCCTTGTAGCCGTCGGCCTGAAGCTACTCTCCAT
GCTCCTCTTCCGTACTATGGGCCACACCCTCGATCGCTCCCTTCCCTCCC
ACCTCGCCGCTGATGCACACTCTCTGCTAGGTACTGACTTCGTTTTCCGT
GTGCCCGTGCGTCATCCTCACCCTCGCTCAGGACGAGGACGAGGACAAGG
AGGAGGGGAGAACGGCAAGGACGACGAGGAAAAGCTGCTCGTGACCGTCC
TGGTCAAGAAAGCCGTTCGCCCTCAACCACCAACGACAACAACAACAGCA
GCAGCAGCAAAAACTGGCAGGGGGAAAGAAAATGAAGAAGATGACCCTCC
CCTCATCCTCCTTTTGCACGGTTTCCCTGATGACGCGTCCACATTCCACG
CACAAATCCTCCCGTTTGCGACCGCGGGCTTCGACGTGGTCGTTCCTGTG
ATGCCGGGGTATGAGCCCAGTACGGCCCTCCTCCCTCCTGAGAGCTATAC
CTTGCCGTCACTCGCTTTGATGCTGGAGAATGTGGTTGAGTGGGCGGTGA
CAACTTCGTTTGTACACGCCGACGAGGATGGAGAGGAGGAGAAGGGAAAT
AATGCCGTTAAAGAGGAGAAGGAAAATGAGCAAAGGAAATGTAAATTACG
AAAAGGAGGGCGAAAAATCCGTGTCCTCGGGCATGATTGGGGCGCGGCGC
TGGCTTACCTTCTTTCGGCCGAAGGGAGTACGTCGGTAGGGAGAATAGCG
TCGATTGCCACGCTGGCCGTGCCGCATAATCCTCTACCTGCCTTCTTGGC
ACATCCAGGGCAGTTTGTGAGGAGCTGGTACATGATTTTTATGCAACTGC
CCTTCTTGCCCGAGTACTGGTTCCGGCTCGGTGGTCGATTTGCTGGTCTG
CACAAATTGTGGCGGGACTGGTCACCAGGATACGTCCTCCCTCCCTCCCT
CCTGGCCTCGCTCCACACGACCTTTTCGGAGCCCGGTGTGCTGGTGAGTG
CCATGCAGTATTATCGCGCCAATGTTCCGCCGATGCTGCAGCGTCTGGTG
AGAGGGAAGGTGGAGGGGTGGGCAGGGGGAGAGGGAGGGACGGAGGGAGG
ATTTGTAGTTGGGGTGCCCACGTTGGGGCTGGTGGGAAAGGAGGATGGAT
GTATTGCTTCAGTGCTCTTTGACGTGGCCATGGGAAGTGTGGAAGGAGGG
GGGCGGCACCACCCACTGTTTTCGAAGGCGGTCCAGGTGGCGAAGGTGGA
AGGAGGGGGGCATTTTGTGCACCAGGAGAGGCCGAAGGAGGTAAACGCCT
TGGTGTTGGCGTGGTTTGAGAGGTTTGGGGAAAACGGGACGGAGGAGAAA
TCCAGGAAAGGGGGGGGTGAAGGAGAAATTCTGACAGAAAATGCAGACAG
GTAA
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Synonyms
Publications