NO15G02610.1, NO15G02610.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G02610.1
Unique NameNO15G02610.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length567
Alignment locationchr15:714813..715629 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:714813..715629 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G02610.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02610NO15G02610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G02610.1NO15G02610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G02610.1.cds1NO15G02610.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02610.1.cds2NO15G02610.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02610.1.cds3NO15G02610.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G02610.1 ID=NO15G02610.1|Name=NO15G02610.1|organism=Nannochloropsis oceanica|type=mRNA|length=567bp
ATGTCTTCTACAGACATTCGAAAGCGCTTACCAGAAACAGAAGAGGATGG
TGCCAATGCTGAGCTTAAGCGTGCCAGGAAGGACCAAAGGAAGGCATCAA
GCGGCGCAGCAGGCGGAATAACCTTCCCAGGGAGAGGCTGCGCCCAAGCC
CAACAAGGCGCCGCCTATGCCGCTTTGGGATCCATTCAAGCCATCCGAGC
TCGCTCCAAAAGCAATCAGGCCAGCTGCACCGTTAAGGAGAGGTGGAGAA
AGAACCATGCGAATAAAGGGAATTTCGATAAGGTCAACAAGAGGTTGGAG
GAACAGGTAGCGAGCCTGAAAGAAGACAATGCTGGGCTACTACAAGAGGT
GGAGTTGTTCCAGGCCCTACTTGGCAACGGAGTTCTTTTGGCGGCGTACC
GGAAGCAGCTCGTCCAGATCAAGATCTTGGAAGCGGAGTTGGAGGCCAAA
CGGGGTCCCAACGATGCTGACCACCGACATGAGGTTGCAAGCGTGAGGGA
GGACTGCGCCATCAAGGTGTGGGAGCTTGAGGCGTCGAAAGAAGGGAGGA
GGAGGGGAGGAAGTTGA
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protein sequence of NO15G02610.1

>NO15G02610.1-protein ID=NO15G02610.1-protein|Name=NO15G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=189bp
MSSTDIRKRLPETEEDGANAELKRARKDQRKASSGAAGGITFPGRGCAQA
QQGAAYAALGSIQAIRARSKSNQASCTVKERWRKNHANKGNFDKVNKRLE
EQVASLKEDNAGLLQEVELFQALLGNGVLLAAYRKQLVQIKILEAELEAK
RGPNDADHRHEVASVREDCAIKVWELEASKEGRRRGGS*
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mRNA from alignment at chr15:714813..715629-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G02610.1 ID=NO15G02610.1|Name=NO15G02610.1|organism=Nannochloropsis oceanica|type=mRNA|length=817bp|location=Sequence derived from alignment at chr15:714813..715629- (Nannochloropsis oceanica)
ATGTCTTCTACAGACATGTGAGGACGTGACTGGGCTGTGGTTTGGCGATT
GGCGTGCTAGGGACATCGGTCATGACCTCCCCCAGGCAACCCACCCCCAG
CCCACTTCCTCCCCCATCACAAAACACATCATAAATGTCTATGCCCGCAG
TCGAAAGCGCTTACCAGAAACAGAAGAGGATGGTGCCAATGCTGAGCTTA
AGCGTGCCAGGAAGGACCAAAGGAAGGCATCAAGCGGCGCAGCAGGCGGA
ATAACCTTCCCAGGGAGAGGCTGCGCCCAAGCCCAACAAGGCGCCGCCTA
TGCCGCTTTGGGATCCATTCAAGCCATCCGAGCTCGCTCCAAAAGCAATC
AGGCCAGCTGCACCGTTAAGGAGAGGTATCAGTGATAAATTGGTCAAGTT
CGCGTGCCACAAACTAAAGCAGCCCCCCCCCCCAAAGCAAGCAGCCCCCT
CACTCTCTTTCCCTGCTCCTTCACTTTCCCTCCTCAACACAGGTGGAGAA
AGAACCATGCGAATAAAGGGAATTTCGATAAGGTCAACAAGAGGTTGGAG
GAACAGGTAGCGAGCCTGAAAGAAGACAATGCTGGGCTACTACAAGAGGT
GGAGTTGTTCCAGGCCCTACTTGGCAACGGAGTTCTTTTGGCGGCGTACC
GGAAGCAGCTCGTCCAGATCAAGATCTTGGAAGCGGAGTTGGAGGCCAAA
CGGGGTCCCAACGATGCTGACCACCGACATGAGGTTGCAAGCGTGAGGGA
GGACTGCGCCATCAAGGTGTGGGAGCTTGAGGCGTCGAAAGAAGGGAGGA
GGAGGGGAGGAAGTTGA
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Coding sequence (CDS) from alignment at chr15:714813..715629-

>NO15G02610.1 ID=NO15G02610.1|Name=NO15G02610.1|organism=Nannochloropsis oceanica|type=CDS|length=567bp|location=Sequence derived from alignment at chr15:714813..715629- (Nannochloropsis oceanica)
ATGTCTTCTACAGACATTCGAAAGCGCTTACCAGAAACAGAAGAGGATGG
TGCCAATGCTGAGCTTAAGCGTGCCAGGAAGGACCAAAGGAAGGCATCAA
GCGGCGCAGCAGGCGGAATAACCTTCCCAGGGAGAGGCTGCGCCCAAGCC
CAACAAGGCGCCGCCTATGCCGCTTTGGGATCCATTCAAGCCATCCGAGC
TCGCTCCAAAAGCAATCAGGCCAGCTGCACCGTTAAGGAGAGGTGGAGAA
AGAACCATGCGAATAAAGGGAATTTCGATAAGGTCAACAAGAGGTTGGAG
GAACAGGTAGCGAGCCTGAAAGAAGACAATGCTGGGCTACTACAAGAGGT
GGAGTTGTTCCAGGCCCTACTTGGCAACGGAGTTCTTTTGGCGGCGTACC
GGAAGCAGCTCGTCCAGATCAAGATCTTGGAAGCGGAGTTGGAGGCCAAA
CGGGGTCCCAACGATGCTGACCACCGACATGAGGTTGCAAGCGTGAGGGA
GGACTGCGCCATCAAGGTGTGGGAGCTTGAGGCGTCGAAAGAAGGGAGGA
GGAGGGGAGGAAGTTGA
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Synonyms
Publications