NO15G02210.1, NO15G02210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G02210.1
Unique NameNO15G02210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1428
Alignment locationchr15:619027..620809 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:619027..620809 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G02210.1 vs.
Match: XP_005854554.1 (myosin light chain kinase [Nannochloropsis gaditana CCMP526]; EKU21801.1 myosin light chain kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 630.6 bits (1625), Expect = 4.100e-177
Identity = 344/485 (70.93%), Postives = 396/485 (81.65%), Query Frame = 0 
Query:    6 SSGKNNKRTGMQVYMDIKIGPRFAGRMIFDLFTDQTPRTAENFRALCTGERGVSPLSGHPLHYKGSTFHRVIKGFMAQGGDFTAGDGTGGESVYGAKFADENFHCLHTERGMLSMANAGPNTNGSQFFLTFRDTPHLDGKHVVFGQLVEEGGGMDVLRMIEAVATDGRDKPRMPVVVVECGQVGERVRDEEEE-----EEAEEVKVGVPGKE----KGKKKGQQEENEGDEDDFAEEEGKGQRGRATVQVEEEEVEEEEEVEEQEEDISGMTDAQRRLFQLKLRLNQGRKLNRLAVKEEHARKSTPNYEAKLRAEERKDSNERWRRELLSRGVKPEEAYLFETAEAAGKKMAAAARKEKGKAAFGWDVFNQDALYKAYKKRLAKLPS-EGG-----EGKKRGEEPDPLAYGTAGKGDEEGLERLADELGEREKARKNFSRRRAEYEGADVTSINERNKMFNKKLKRAYDKYTVETRQNLERGTAL 476
            SS     +  +QVYMDIKIGPRFAGRM+F+LFT+QTPRTAENFRALCTGERG+SPLSGHPLHYKGS FHRVIKGFMAQGGDFTAGDGTGGESVYG KFADE F   H  RG LSMANAGP+TNGSQFFLTFRDTPHLDGKHVVFG+L+E   GM+VL+++E VATDGRD+PRMPV VV+CGQ+GE   ++E +     EEAE  ++G   +E    KG KK Q EE+ G++++  EE           ++ E+E  EEEE  E+E D+SGMT+ QRRL++LK +LNQGRKLNR AVKEE  RK+TPN EA+LRAEER+DSNERWR+E+L+RG+KPEEAY+FETAEAAGKK AAA RK KG+AAFGWDVFNQDALYKAYKKRL KLPS EGG     E + RGEEPDPLAYG A +G+  GL R+ +EL ERE+ARKNFSRRRA YEG DV+SINERNKMFNKKLKRAYDKYTVETRQNLERGTAL
Sbjct:  337 SSMSGGTKKSVQVYMDIKIGPRFAGRMVFELFTEQTPRTAENFRALCTGERGISPLSGHPLHYKGSIFHRVIKGFMAQGGDFTAGDGTGGESVYGLKFADEAFTYQHASRGTLSMANAGPDTNGSQFFLTFRDTPHLDGKHVVFGRLLE---GMEVLQVVEMVATDGRDRPRMPVTVVDCGQIGETAEEDEGDEGERGEEAEGAEMGDKPEEGRQGKGAKKVQGEEDSGEDEEKEEE-----------RIREDEEAEEEEEGEKEADMSGMTETQRRLYKLKWKLNQGRKLNRQAVKEEFTRKNTPNLEARLRAEERRDSNERWRKEILARGMKPEEAYMFETAEAAGKKQAAAVRKAKGQAAFGWDVFNQDALYKAYKKRLGKLPSAEGGARAEEEKEGRGEEPDPLAYGQAPRGEAAGLVRMTEELEERERARKNFSRRRAAYEGEDVSSINERNKMFNKKLKRAYDKYTVETRQNLERGTAL 807
The following BLAST results are available for this feature:
BLAST of NO15G02210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005854554.14.100e-17770.93myosin light chain kinase [Nannochloropsis gaditan... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02210NO15G02210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G02210.1NO15G02210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G02210.1.cds1NO15G02210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02210.1.cds2NO15G02210.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02210.1.cds3NO15G02210.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G02210.1 ID=NO15G02210.1|Name=NO15G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1428bp
ATGGCCTACAGCACGAGCAGCGGCAAGAACAACAAAAGAACGGGAATGCA
GGTGTATATGGACATTAAGATTGGGCCTCGATTTGCCGGGCGGATGATCT
TTGATCTCTTCACCGACCAGACCCCGCGGACAGCTGAGAACTTTCGTGCC
CTCTGCACCGGCGAGCGGGGCGTCAGCCCGTTGTCAGGCCACCCACTACA
CTACAAGGGCTCGACCTTTCACCGTGTCATAAAAGGCTTCATGGCGCAAG
GAGGGGATTTTACTGCGGGTGATGGGACGGGGGGGGAGTCCGTGTACGGC
GCCAAGTTCGCCGACGAGAATTTCCATTGCCTGCACACGGAGCGGGGCAT
GCTCTCCATGGCTAATGCAGGACCCAACACCAACGGCAGTCAGTTTTTCC
TGACATTTCGGGATACACCCCACTTGGACGGGAAACACGTTGTCTTTGGC
CAGTTGGTGGAGGAAGGAGGAGGAATGGATGTGTTGCGGATGATCGAGGC
CGTGGCGACGGATGGAAGGGATAAGCCACGCATGCCTGTTGTGGTGGTGG
AGTGTGGCCAGGTGGGGGAGAGGGTGCGGGATGAGGAGGAGGAAGAGGAA
GCAGAGGAGGTGAAGGTAGGTGTGCCTGGGAAGGAAAAGGGGAAGAAGAA
GGGTCAGCAGGAAGAGAACGAGGGAGACGAGGATGATTTCGCGGAGGAGG
AAGGGAAAGGACAGCGAGGACGGGCTACGGTACAGGTGGAAGAGGAGGAG
GTGGAGGAGGAGGAAGAGGTGGAAGAGCAGGAAGAAGATATTAGCGGGAT
GACGGACGCGCAACGTCGTTTGTTCCAACTTAAGTTAAGATTAAACCAAG
GACGCAAATTGAACCGACTGGCCGTTAAGGAAGAGCACGCCCGAAAATCA
ACGCCTAATTATGAAGCTAAGCTCAGGGCTGAGGAACGGAAAGACTCCAA
CGAACGGTGGAGAAGGGAGTTGCTCTCTCGGGGGGTGAAGCCTGAAGAGG
CGTACCTCTTTGAGACGGCCGAGGCGGCGGGGAAGAAGATGGCCGCAGCG
GCAAGAAAGGAGAAGGGCAAGGCGGCGTTTGGATGGGACGTGTTCAACCA
GGATGCCCTGTATAAAGCTTACAAGAAGAGGCTGGCAAAATTGCCGTCGG
AAGGAGGGGAAGGGAAGAAGAGGGGGGAGGAACCGGATCCCTTGGCTTAT
GGGACGGCAGGGAAGGGGGATGAGGAGGGCCTTGAGAGATTGGCGGATGA
GTTGGGGGAGAGGGAGAAGGCACGGAAGAATTTCAGTCGGCGACGGGCTG
AGTACGAGGGGGCGGATGTGACCAGCATTAATGAGAGGAATAAGATGTTC
AACAAGAAATTGAAGAGGGCATATGATAAGTACACAGTGGAAACGCGGCA
GAATTTGGAGAGGGGGACGGCCTTGTAG
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protein sequence of NO15G02210.1

>NO15G02210.1-protein ID=NO15G02210.1-protein|Name=NO15G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MAYSTSSGKNNKRTGMQVYMDIKIGPRFAGRMIFDLFTDQTPRTAENFRA
LCTGERGVSPLSGHPLHYKGSTFHRVIKGFMAQGGDFTAGDGTGGESVYG
AKFADENFHCLHTERGMLSMANAGPNTNGSQFFLTFRDTPHLDGKHVVFG
QLVEEGGGMDVLRMIEAVATDGRDKPRMPVVVVECGQVGERVRDEEEEEE
AEEVKVGVPGKEKGKKKGQQEENEGDEDDFAEEEGKGQRGRATVQVEEEE
VEEEEEVEEQEEDISGMTDAQRRLFQLKLRLNQGRKLNRLAVKEEHARKS
TPNYEAKLRAEERKDSNERWRRELLSRGVKPEEAYLFETAEAAGKKMAAA
ARKEKGKAAFGWDVFNQDALYKAYKKRLAKLPSEGGEGKKRGEEPDPLAY
GTAGKGDEEGLERLADELGEREKARKNFSRRRAEYEGADVTSINERNKMF
NKKLKRAYDKYTVETRQNLERGTAL*
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mRNA from alignment at chr15:619027..620809+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G02210.1 ID=NO15G02210.1|Name=NO15G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1783bp|location=Sequence derived from alignment at chr15:619027..620809+ (Nannochloropsis oceanica)
ATGGCCTACAGCACGAGCAGCGGCAAGAACAACAAAAGAACGGGAATGCA
GGTGTATATGGACATTAAGATTGGGCCTCGATTTGCCGGGCGGATGATCT
TTGATGTGAGTCTGGAACCCTTCCCTCCTTCCTCTCTCCCTCCTCAACTC
TCCCCTCCCTCGTCCACCTCCCAGCTGTTGTCCACCCGCCGGCAAAGTTT
AGAAGCCTGGCACGCTTCTATGCAGCAGATTTCCTGCATGATTGCCCCCT
CCCCCCCTTCCCCCCCCTGCTACAACATGCACTCACCCCTCCATCGTCCC
TCTCACCCACCCACCTACCCAGCTCTTCACCGACCAGACCCCGCGGACAG
CTGAGAACTTTCGTGCCCTCTGCACCGGCGAGCGGGGCGTCAGCCCGTTG
TCAGGCCACCCACTACACTACAAGGGCTCGACCTTTCACCGTGTCATAAA
AGGCTTCATGGCGCAAGGAGGGGATTTTACTGCGGGTGATGGGACGGGGG
GGGAGTCCGTGTACGGGTAGGTGGCGAAAAGATGGGGGGCACCGAAGGGA
GGAGTGGACCAGAAAGGATGTGCTGTCACACGAAGCTATGGCTTCATAAC
TTATCGCTCATCTTCATCCCCTCCCTCCTTCCCCTCCCTCCCTAACTCCC
TCAGCGCCAAGTTCGCCGACGAGAATTTCCATTGCCTGCACACGGAGCGG
GGCATGCTCTCCATGGCTAATGCAGGACCCAACACCAACGGCAGTCAGTT
TTTCCTGACATTTCGGGATACACCCCACTTGGACGGGAAACACGTTGTCT
TTGGCCAGTTGGTGGAGGAAGGAGGAGGAATGGATGTGTTGCGGATGATC
GAGGCCGTGGCGACGGATGGAAGGGATAAGCCACGCATGCCTGTTGTGGT
GGTGGAGTGTGGCCAGGTGGGGGAGAGGGTGCGGGATGAGGAGGAGGAAG
AGGAAGCAGAGGAGGTGAAGGTAGGTGTGCCTGGGAAGGAAAAGGGGAAG
AAGAAGGGTCAGCAGGAAGAGAACGAGGGAGACGAGGATGATTTCGCGGA
GGAGGAAGGGAAAGGACAGCGAGGACGGGCTACGGTACAGGTGGAAGAGG
AGGAGGTGGAGGAGGAGGAAGAGGTGGAAGAGCAGGAAGAAGATATTAGC
GGGATGACGGACGCGCAACGTCGTTTGTTCCAACTTAAGTTAAGATTAAA
CCAAGGACGCAAATTGAACCGACTGGCCGTTAAGGAAGAGCACGCCCGAA
AATCAACGCCTAATTATGAAGCTAAGCTCAGGGCTGAGGAACGGAAAGAC
TCCAACGAACGGTGGAGAAGGGAGTTGCTCTCTCGGGGGGTGAAGCCTGA
AGAGGCGTACCTCTTTGAGACGGCCGAGGCGGCGGGGAAGAAGATGGCCG
CAGCGGCAAGAAAGGAGAAGGGCAAGGCGGCGTTTGGATGGGACGTGTTC
AACCAGGATGCCCTGTATAAAGCTTACAAGAAGAGGCTGGCAAAATTGCC
GTCGGAAGGAGGGGAAGGGAAGAAGAGGGGGGAGGAACCGGATCCCTTGG
CTTATGGGACGGCAGGGAAGGGGGATGAGGAGGGCCTTGAGAGATTGGCG
GATGAGTTGGGGGAGAGGGAGAAGGCACGGAAGAATTTCAGTCGGCGACG
GGCTGAGTACGAGGGGGCGGATGTGACCAGCATTAATGAGAGGAATAAGA
TGTTCAACAAGAAATTGAAGAGGGCATATGATAAGTACACAGTGGAAACG
CGGCAGAATTTGGAGAGGGGGACGGCCTTGTAG
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Coding sequence (CDS) from alignment at chr15:619027..620809+

>NO15G02210.1 ID=NO15G02210.1|Name=NO15G02210.1|organism=Nannochloropsis oceanica|type=CDS|length=1428bp|location=Sequence derived from alignment at chr15:619027..620809+ (Nannochloropsis oceanica)
ATGGCCTACAGCACGAGCAGCGGCAAGAACAACAAAAGAACGGGAATGCA
GGTGTATATGGACATTAAGATTGGGCCTCGATTTGCCGGGCGGATGATCT
TTGATCTCTTCACCGACCAGACCCCGCGGACAGCTGAGAACTTTCGTGCC
CTCTGCACCGGCGAGCGGGGCGTCAGCCCGTTGTCAGGCCACCCACTACA
CTACAAGGGCTCGACCTTTCACCGTGTCATAAAAGGCTTCATGGCGCAAG
GAGGGGATTTTACTGCGGGTGATGGGACGGGGGGGGAGTCCGTGTACGGC
GCCAAGTTCGCCGACGAGAATTTCCATTGCCTGCACACGGAGCGGGGCAT
GCTCTCCATGGCTAATGCAGGACCCAACACCAACGGCAGTCAGTTTTTCC
TGACATTTCGGGATACACCCCACTTGGACGGGAAACACGTTGTCTTTGGC
CAGTTGGTGGAGGAAGGAGGAGGAATGGATGTGTTGCGGATGATCGAGGC
CGTGGCGACGGATGGAAGGGATAAGCCACGCATGCCTGTTGTGGTGGTGG
AGTGTGGCCAGGTGGGGGAGAGGGTGCGGGATGAGGAGGAGGAAGAGGAA
GCAGAGGAGGTGAAGGTAGGTGTGCCTGGGAAGGAAAAGGGGAAGAAGAA
GGGTCAGCAGGAAGAGAACGAGGGAGACGAGGATGATTTCGCGGAGGAGG
AAGGGAAAGGACAGCGAGGACGGGCTACGGTACAGGTGGAAGAGGAGGAG
GTGGAGGAGGAGGAAGAGGTGGAAGAGCAGGAAGAAGATATTAGCGGGAT
GACGGACGCGCAACGTCGTTTGTTCCAACTTAAGTTAAGATTAAACCAAG
GACGCAAATTGAACCGACTGGCCGTTAAGGAAGAGCACGCCCGAAAATCA
ACGCCTAATTATGAAGCTAAGCTCAGGGCTGAGGAACGGAAAGACTCCAA
CGAACGGTGGAGAAGGGAGTTGCTCTCTCGGGGGGTGAAGCCTGAAGAGG
CGTACCTCTTTGAGACGGCCGAGGCGGCGGGGAAGAAGATGGCCGCAGCG
GCAAGAAAGGAGAAGGGCAAGGCGGCGTTTGGATGGGACGTGTTCAACCA
GGATGCCCTGTATAAAGCTTACAAGAAGAGGCTGGCAAAATTGCCGTCGG
AAGGAGGGGAAGGGAAGAAGAGGGGGGAGGAACCGGATCCCTTGGCTTAT
GGGACGGCAGGGAAGGGGGATGAGGAGGGCCTTGAGAGATTGGCGGATGA
GTTGGGGGAGAGGGAGAAGGCACGGAAGAATTTCAGTCGGCGACGGGCTG
AGTACGAGGGGGCGGATGTGACCAGCATTAATGAGAGGAATAAGATGTTC
AACAAGAAATTGAAGAGGGCATATGATAAGTACACAGTGGAAACGCGGCA
GAATTTGGAGAGGGGGACGGCCTTGTAG
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Synonyms
Publications