NO15G02060.1, NO15G02060.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G02060.1
Unique Name	NO15G02060.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3299
Alignment location	chr15:574342..578723 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:574342..578723 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G02060.1 vs.
Match: CBJ27348.1 (ATP-binding cassette, sub-family B, member 8 precursor [Ectocarpus siliculosus])

HSP 1 Score: 505.4 bits (1300), Expect = 3.100e-139
Identity = 283/619 (45.72%), Postives = 396/619 (63.97%), Query Frame = 0

Query:  158 ERTYLTLSIFALVGAASCEVAVPHYSSKALNSVVVTGNMQDFHQAVTTVIALGLASSAFTFVRAAFFGLSGTRIATRARSMLLGSLLKQDIAFFDSKDTGELTNRLSADCSKFSSVVSSHVNVLLRQSIQLIGGGIFLFRINLGLALVTFLGIFLIGALTTLHGEFIRRMGRRSQDSLAKANAVAGQILSLVRVVRSHGSEHQELSRYGAQLRNTVNMLETHDLGHSLYRSLVRLLQTGLQATVMGLGARAVMLRQMTGEQLTSFLFYVNFVSAASFDVGDRWTSIQDAIGSTTSVFSLMDRKPRLRVREDLRGAIAAGVLSADTTTCKMS--------------------DAALQAPRTRYNYMADS-------YVPLGRVNFSNVTFAYPLREKKTVLHDITFEIRPGERTAIVGGSGAGKSTLMRLLTRFYDPTTGQVLLDGQDISSLTQRELTQRICFLPQEPQLFPISIADNIIYGMQEDSYSSEDIEQAAREANVHDFIQSLPEKYQTRVGEGSVSLSGGEKQRVCLARAIIRRPNVLLLDEPTSALDVTSEKVVQEALDLVSTGRTVVIIAHRLSTIKHVENIVVMENGRVAEQGNHAVLKAANGVYSKLLK 750
            +R  L  SI  LV AA+CE+AVPHYSS+ALN+     +  +F +++  ++A  L +S FT +R A F L+GT +  + R  LL SLLKQDI+F DS +TG LT+RL++D +K S+VVS HVN+L RQ IQ +GG  +L+ +   LA V  +G+ L+G +TT +G F RR+  + Q +LA+A +VA Q LSL+RVVR+H +E  E  RYG ++ N+V + ET  + + + R ++   Q  L   V+ LGA  V   +MTG+QLT+F+FY  FV++ASFDVGD+   IQ+A+G+   VF L+DR+P +  +    G  +    S+ T T   S                    DA + +P  +    A S           GRV F +V+F YP R    VL  +   +RPGE+ A+VG SG GKST++RL+ RFYDP  G +LL G+D+S+    +++  + ++ QEPQLFPIS+ +NI YGM   SYS ED+ +AA+ AN+H+F+  LPE Y T VGEG  SLSGG+KQRV +ARA+IR P VLLLDEPTSALDV SE++VQ+ALD    GRTV++IAHRL+TI+  + IVVM+NGR+ E G H  L +  GVY+ L K
Sbjct:   46 QRGVLLASIVTLVLAAACEIAVPHYSSRALNAAAFANDRVEFARSLQGMVAYSLLASVFTGLRGACFWLAGTHVVAKVRFDLLSSLLKQDISFHDSNETGALTSRLASDTAKISNVVSFHVNILCRQVIQAVGGLGYLYMLERQLACVALVGLVLVGGITTAYGRFSRRISAKVQTALAEAGSVAEQSLSLIRVVRAHANEQHERRRYGGKIGNSVELQETQGIAYGVARVVIGWSQAILLGAVLLLGAGRVFDGRMTGQQLTTFVFYTQFVTSASFDVGDQ---IQEALGAGQKVFELLDREPIMTGQAKTEGKQSVEHSSSSTLTQHDSTVMEEHAPPLTNSVGSKGGGDADMPSPHLQQQQQATSAHAGSERQRQRGRVEFDSVSFGYPTRSGVLVLDGLNLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGM--GSYSMEDVYKAAKSANIHNFVSELPEGYDTLVGEGGASLSGGQKQRVAIARALIRDPEVLLLDEPTSALDVESERLVQDALDTAGKGRTVILIAHRLATIQRADRIVVMQNGRLVESGKHEELLSLGGVYAGLYK 659

The following BLAST results are available for this feature:

BLAST of NO15G02060.1 vs.

BLAST of NO15G02060.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ27348.1	3.100e-139	45.72	ATP-binding cassette, sub-family B, member 8 precu...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G02060	NO15G02060	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02060.1	NO15G02060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02060.1.cds1	NO15G02060.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02060.1.cds2	NO15G02060.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02060.1.cds3	NO15G02060.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02060.1.cds4	NO15G02060.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02060.1.cds5	NO15G02060.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02060.1.cds6	NO15G02060.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G02060.1.cds7	NO15G02060.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:574342..578723-
coding sequence from alignment at chr15:574342..578723-

mRNA sequence

>NO15G02060.1 ID=NO15G02060.1|Name=NO15G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=3299bp
AACAGAACTATGGAATCGACAAATTCCTACAGATAGCCCTTTAACAGAGA
TAGCGCCCCCTCATCTCCTGCCGCAAGAACCTTCCGACCATGGCCATCGT
GCCTAGAGCACCGAGGTGCTTCCTCCTGCCGCGGCAAGTAAAGCTGATAA
TTGTTGCAGCACTCGTTCTGCTGCTGCTGATCATTGTGCCAGAAGCTGTT
GCCTTTGCCCCTCTAGGAAAGGCTTGCCTGCTACCCGCCTTGGGGTCCCG
ACATGCGTTTTCATCCCGGGCGCATACCGCAGCATCTCGACAGGACCATC
ATCAGCACCGAAGCCGGCATAGTAACGGACACGATTCCCACCCAGTCTAC
TCTGACTTTGTCCGCATCGACGGCGACGAGCATGACCCTCTCCGCCGGCG
GGGTTTTGACGTCTCGGTCCGCAACTTTGTACGGCGGGCCATGGAGACTT
TCGAAATTGGCAAGATTGGTAAAGTCGCTGCCTTGGCCGCGGCACAGTCT
GGGAGGGGATGCCCCTCGGGCACCAAAGACTGGCTGCGATTCATCAAAGC
CTGTCTGTACGAACGGACCTACTTGACCTTGAGTATTTTTGCGCTAGTGG
GGGCGGCGTCTTGCGAGGTAGCCGTGCCGCACTATTCCTCCAAGGCGCTC
AACTCGGTGGTTGTCACAGGAAATATGCAAGATTTTCATCAGGCCGTCAC
TACCGTCATTGCTTTGGGCCTGGCCTCTTCCGCCTTCACCTTCGTGCGTG
CGGCATTTTTCGGCCTTTCAGGCACCCGTATTGCTACTCGCGCACGGTCC
ATGTTGTTGGGGTCGTTGCTGAAGCAGGACATAGCGTTTTTCGACAGCAA
AGACACAGGAGAGCTCACCAATCGCTTGTCGGCGGATTGTTCGAAGTTTT
CCAGTGTAGTCTCGTCTCATGTCAATGTCTTGTTGCGGCAGTCCATCCAG
CTGATCGGGGGGGGCATTTTTCTGTTTCGAATTAATCTCGGCCTGGCTTT
GGTGACCTTCCTGGGCATATTTTTGATTGGTGCCCTGACGACTCTGCATG
GTGAGTTCATCCGCCGTATGGGTCGACGGAGCCAGGACTCCCTGGCCAAG
GCCAATGCCGTTGCCGGGCAGATCCTCTCTTTGGTTCGTGTCGTGCGGTC
TCATGGGAGCGAGCACCAGGAGCTGTCCCGGTATGGTGCTCAATTGCGCA
ACACGGTCAACATGCTCGAAACACATGACTTGGGGCACAGCCTGTACCGT
TCTCTTGTTCGGTTGCTACAGACAGGCCTCCAGGCCACCGTCATGGGTCT
TGGGGCTCGGGCAGTTATGCTGCGGCAGATGACCGGCGAGCAGCTGACAT
CGTTTTTGTTTTACGTAAATTTTGTGTCGGCGGCATCATTCGATGTGGGC
GACCGGTGGACGAGCATTCAGGATGCCATTGGGTCTACAACCTCCGTCTT
TTCACTGATGGACCGCAAGCCTCGCCTAAGGGTGCGGGAGGATCTCCGAG
GCGCAATAGCAGCAGGGGTCTTGTCCGCGGACACAACGACGTGCAAAATG
AGTGACGCAGCGCTGCAAGCACCAAGGACGCGGTACAACTACATGGCAGA
CAGCTACGTGCCTTTGGGACGGGTCAACTTTTCGAATGTCACGTTTGCGT
ACCCGTTACGGGAAAAGAAGACAGTATTGCATGACATTACTTTCGAGATT
CGCCCGGGAGAGCGCACAGCAATCGTGGGAGGAAGCGGCGCCGGGAAAAG
TACGTTGATGCGATTGTTGACGCGCTTTTACGATCCAACCACGGGTCAGG
TGCTGCTGGACGGCCAGGACATCAGCTCCCTCACACAACGGGAGCTGACA
CAGCGAATCTGTTTCCTCCCCCAAGAGCCCCAACTTTTCCCCATCTCCAT
CGCGGACAACATCATCTACGGCATGCAGGAAGATTCCTACTCCTCGGAAG
ATATTGAGCAAGCCGCGCGCGAGGCCAATGTACACGACTTTATCCAATCT
CTTCCTGAAAAGTACCAGACACGGGTAGGGGAAGGCTCCGTCTCACTCAG
TGGTGGTGAAAAACAGCGAGTGTGCTTGGCAAGGGCGATCATCCGCCGGC
CCAACGTGCTTCTGCTCGACGAGCCCACGAGTGCGCTGGACGTGACTTCG
GAAAAAGTCGTTCAGGAGGCTCTGGACCTCGTGAGCACTGGTAGGACCGT
AGTCATCATCGCGCATCGCCTGTCGACAATCAAGCATGTGGAGAACATCG
TTGTGATGGAGAATGGACGAGTCGCAGAGCAAGGGAATCATGCCGTGCTC
AAGGCAGCGAACGGCGTCTATTCTAAGTTGCTCAAAACTTATAAGGACAG
CATCATTGACGCATAGCCTGTAAAGCTGGGGGAATGAGCCGTGACAGTAC
GTATGTATTTGTAATTTGTTTTACTGGCAAAAAACAATAGCAATAAAATA
ATTATGTTGGATAATTATTAAGCCTCACGCACTCTGCTAGACTATCCTGT
GTAATTGTTGTATTCCTACATCCTCTTTTGTCCGCTATGTTTATCTGGCT
GGACCACCAATTCCCATGCTGCTTATTTTCCCTCGTTTCCTCACATACCC
ACCCAATCCCCTCCTTCTTTTCTTTCCTCGCCACCCACTCTTACCGCTAC
CGGATTGATTTTCTATAAATATCTCGTACATTTCCTCCTTGGTCATGGGC
GAGGTGAGCGGGAGATTGGAGGGGCCCGCAAAGAGTCTATTTGTGTCGTT
CGTGACTCAAATGACATAGGATCAATGCAAACACTTCTGTCTCCGTACTT
TTGTCTTACATTTGTCGATCGATATTTCTGTCCGCATGCGTGCAATCCAT
AGCATTGCGCAGACGCAGATAGCGACGAGAGGCTCTCGGAGAAGGCCGTT
TCTTGGCCAAACTTTCATGATGTCGTGTTCCATTTCTGCGATGAGCGTGG
AATGCTAGTGAATGCGGAACTCCAGATGGGCTGGTCAACGCAGTCTCCGA
GTTGACAACGGCATTCAAAAAGCACGGTGAGGCGATAACGGAGCTAACCA
AGGCATAGAGCTAAGGCAGGGATGGCAAACGGCCGCCCGAGGGCAAGCAA
GGCGACGAGTTCTCGGAGGAAAGGCGCAACATCCGCGGCCGGGGCACCCC
GCGCAACAGGTTCGCCGACAACCAGTGCACATTCTGCGAGAAGGTTGGCC
ACTGGCAGATGGACTGCCTCAAAATAAAGGCGTGGCGGGCGGCGAAACAC
AATGACGACTCTAACTTCTACTCCAACTCCCATCAGCGTCACACGTCCC

protein sequence of NO15G02060.1

>NO15G02060.1-protein ID=NO15G02060.1-protein|Name=NO15G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MAIVPRAPRCFLLPRQVKLIIVAALVLLLLIIVPEAVAFAPLGKACLLPA
LGSRHAFSSRAHTAASRQDHHQHRSRHSNGHDSHPVYSDFVRIDGDEHDP
LRRRGFDVSVRNFVRRAMETFEIGKIGKVAALAAAQSGRGCPSGTKDWLR
FIKACLYERTYLTLSIFALVGAASCEVAVPHYSSKALNSVVVTGNMQDFH
QAVTTVIALGLASSAFTFVRAAFFGLSGTRIATRARSMLLGSLLKQDIAF
FDSKDTGELTNRLSADCSKFSSVVSSHVNVLLRQSIQLIGGGIFLFRINL
GLALVTFLGIFLIGALTTLHGEFIRRMGRRSQDSLAKANAVAGQILSLVR
VVRSHGSEHQELSRYGAQLRNTVNMLETHDLGHSLYRSLVRLLQTGLQAT
VMGLGARAVMLRQMTGEQLTSFLFYVNFVSAASFDVGDRWTSIQDAIGST
TSVFSLMDRKPRLRVREDLRGAIAAGVLSADTTTCKMSDAALQAPRTRYN
YMADSYVPLGRVNFSNVTFAYPLREKKTVLHDITFEIRPGERTAIVGGSG
AGKSTLMRLLTRFYDPTTGQVLLDGQDISSLTQRELTQRICFLPQEPQLF
PISIADNIIYGMQEDSYSSEDIEQAAREANVHDFIQSLPEKYQTRVGEGS
VSLSGGEKQRVCLARAIIRRPNVLLLDEPTSALDVTSEKVVQEALDLVST
GRTVVIIAHRLSTIKHVENIVVMENGRVAEQGNHAVLKAANGVYSKLLKT
YKDSIIDA*

mRNA from alignment at chr15:574342..578723-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G02060.1 ID=NO15G02060.1|Name=NO15G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=4382bp|location=Sequence derived from alignment at chr15:574342..578723- (Nannochloropsis oceanica)
AACAGAACTATGGAATCGACAAATTCCTACAGATAGCCCTTTAACAGAGA
TAGCGCCCCCTCATCTCCTGCCGCAAGAACCTTCCGACCATGGCCATCGT
GCCTAGAGCACCGAGGTGCTTCCTCCTGCCGCGGCAAGTAAAGCTGATAA
TTGTTGCAGCACTCGTTCTGCTGCTGCTGATCATTGTGCCAGGTATGAGG
AAGCACACTTGTATTTCTCATCTTTATTGCATGAGCAAAGGGATTTTAAG
TAGAATAACGTGTACATCTCGGCCCCTTCTTGCCCTCTCCAAGCTATCGG
TGCTCATCCTACAAGAGGGGTCACGAGTCACTCATGCCAGCACAAATACA
CGAATGACCGGGCACGCTTTTTAAGCTCTCAAACTTAAATTTGCACGACC
GTGCGGATGCATACGCAAGCATTCTTACGCACCAACACATAAACACACAC
TAGAAGCTGTTGCCTTTGCCCCTCTAGGAAAGGCTTGCCTGCTACCCGCC
TTGGGGTCCCGACATGCGTTTTCATCCCGGGCGCATACCGCAGCATCTCG
ACAGGACCATCATCAGCACCGAAGCCGGCATAGTAACGGACACGATTCCC
ACCCAGTCTACTCTGACTTTGTCCGCATCGACGGCGACGAGCATGACCCT
CTCCGCCGGCGGGGTTTTGACGTCTCGGTCCGCAACTTTGTACGGCGGGC
CATGGAGACTTTCGAAATTGGCAAGATTGGTAAAGTCGCTGCCTTGGCCG
CGGCACAGTCTGGGAGGGGATGCCCCTCGGGCACCAAAGACTGGCTGCGA
TTCATCAAAGCCTGTCTGTACGAACGGACCTACTTGACCTTGAGTATTTT
TGCGCTAGTGGGGGCGGCGTCTTGCGAGGTAGCCGTGCCGCACTATTCCT
CCAAGGCGCTCAACTCGGTGGTTGTCACAGGAAATATGCAAGATTTTCAT
CAGGCCGTCACTACCGTCATTGCTTTGGGCCTGGCCTCTTCCGCCTTCAC
CTTCGTGCGTGCGGCATTTTTCGGCCTTTCAGGCACCCGTATTGCTACTC
GCGCACGGTCCATGTTGTTGGGGTCGTTGCTGAAGCAGGACATAGCGTTT
TTCGACAGCAAAGACACAGGAGAGCTCACCAATCGCTTGTCGGCGGATTG
TTCGAAGTTTTCCAGTGTAGTCTCGTCTCATGTCAATGTCTTGTTGCGGC
AGTCCATCCAGCTGATCGGGGGGGGCATTTTTCTGTTTCGAATTAATCTC
GGCCTGGCTTTGGTGACCTTCCTGGGCATATTTTTGATTGGTGCCCTGAC
GACTCTGCATGGTGAGTTCATCCGCCGTATGGGTCGACGGAGCCAGGACT
CCCTGGCCAAGGCCAATGCCGTTGCCGGGCAGATCCTCTCTTTGGTTCGT
GTCGTGCGGTCTCATGGGAGCGAGCACCAGGAGCTGTCCCGGTATGGTGC
TCAATTGCGCAACACGGTCAACATGCTCGAAACACATGACTTGGGGCACA
GCCTGTACCGTTCTCTTGTTCGGTTGCTACAGACAGGCCTCCAGGCCACC
GTCATGGGTCTTGGGGCTCGGGCAGTTATGCTGCGGCAGATGACCGGCGA
GCAGCTGACATCGTTTTTGTTTTACGTAAATTTTGTGTCGGCGGCATCAT
TCGATGTGGGCGACCGGTGGACGAGCATTCAGGATGCCATTGGGTCTACA
ACCTCCGTCTTTTCACTGATGGACCGCAAGCCTCGCCTAAGGGTGCGGGA
GGATCTCCGAGGCGCAATAGCAGCAGGGGTCTTGTCCGCGGACACAACGA
CGTGCAAAATGAGTGACGCAGCGCTGCAAGCACCAAGGACGCGGTACAAC
TACATGGCAGACAGCTACGTGCCTTTGGGACGGGTCAACTTTTCGAATGT
CACGTTTGCGTACCCGTTACGGGAAAAGAAGACAGTATTGCATGACATTA
CTTTCGAGATTCGCCCGGGAGAGCGCACAGCAATCGTGGGAGGAAGCGGC
GCCGGGAAAAGTACGTTGATGCGATTGTTGACGCGCTTTTACGGTGAGTC
TTATTGCTTTGACGGGAAGAAAGAGGTTGAGGGAAATAGGGAGCAGAGAG
GTTAGAGGGAGTAGGAGTGAAACGAGACCCTCTCCATAGCCAATACTTCG
ATGGAGTTTATTTCATTGGTCCTCTTCCTCTCACGCTAACTGATTCAAAC
CGTGCCTCATAATCATAGATCCAACCACGGGTCAGGTGCTGCTGGACGGC
CAGGACATCAGCTCCCTCACACAACGGGTAAGTGTGCGTCGGAGTTGGCG
AGACGTTTGTTCCTTGCCTTTTTCTTTTCTCGATGGACTGGCCGCTCCCT
GCTCTCTCTGAATCGCCAAGTGCCTTTCACATCCACAGGAGCTGACACAG
CGAATCTGTTTCCTCCCCCAAGAGCCCCAACTTTTCCCCATCTCCATCGC
GGACAACATCATCTACGGCATGCAGGAAGATTCCTACTCCTCGGAAGATA
TTGAGCAAGCCGCGCGCGAGGCCAATGTACACGACTTTATCCAATCTCTT
CCTGAAAAGTACCAGACACGGGTAGGGGAAGGCTCCGTCTCACTCAGTGG
TGGTGAAAAACAGCGAGTGTGCTTGGCAAGGGCGATCATCCGCCGGCCCA
ACGTGCTTCTGCTCGACGAGCCCACGAGGTAAGAGAAACAAGAGGAGTTT
GTGTTAGGTAAGGGAGGAAATGTCTTCTCGGTGTAGCAAGAAATGGCGAT
CAAGGGACCTTTTCCTCTACTCCCGTGATGGTCTCCCGTTTGTGGCAAGA
GAAACTTAACAGCCTGAATGTACTCTTCTCCTCTTCGTCATCACTCACTG
GTACATTTCTTTCTTATTCATTCAACAGTGCGCTGGACGTGACTTCGGAA
AAAGGTAAGATCTGTGGCCTGAGGGGCTGGCTCGCGGAGAAAGAGGGCGT
GAGTATCATCATCGTGCCCTCTTTAAATGCCATTTTTGGTAAAGAGGGGG
GATAGGATAATATGCTACCTTCACTTTTTCCCCTTACCTGTCCTTGCTTG
ATCACCCTTTGCTGCGCTCAAGTAACCTCACTGACTCTTCTTTGCCAATT
TGTACCCTCCATCTATTCATAACAACAGTCGTTCAGGAGGCTCTGGACCT
CGTGAGCACTGGTAGGACCGTAGTCATCATCGCGCATCGCCTGTCGACAA
TCAAGCATGTGGAGAACATCGTTGTGATGGAGGTAAGAAGAGTTGAGGAT
GCAGTTGTATTGAAGAGGAGATGAAGTAGCGCACGGAATATGTGAGAGAA
TATGGAGACTCATCAGCAAACACGTACATCACATCAACTCAAAGAATGGA
CGAGTCGCAGAGCAAGGGAATCATGCCGTGCTCAAGGCAGCGAACGGCGT
CTATTCTAAGTTGCTCAAAACTTATAAGGACAGCATCATTGACGCATAGC
CTGTAAAGCTGGGGGAATGAGCCGTGACAGTACGTATGTATTTGTAATTT
GTTTTACTGGCAAAAAACAATAGCAATAAAATAATTATGTTGGATAATTA
TTAAGCCTCACGCACTCTGCTAGACTATCCTGTGTAATTGTTGTATTCCT
ACATCCTCTTTTGTCCGCTATGTTTATCTGGCTGGACCACCAATTCCCAT
GCTGCTTATTTTCCCTCGTTTCCTCACATACCCACCCAATCCCCTCCTTC
TTTTCTTTCCTCGCCACCCACTCTTACCGCTACCGGATTGATTTTCTATA
AATATCTCGTACATTTCCTCCTTGGTCATGGGCGAGGTGAGCGGGAGATT
GGAGGGGCCCGCAAAGAGTCTATTTGTGTCGTTCGTGACTCAAATGACAT
AGGATCAATGCAAACACTTCTGTCTCCGTACTTTTGTCTTACATTTGTCG
ATCGATATTTCTGTCCGCATGCGTGCAATCCATAGCATTGCGCAGACGCA
GATAGCGACGAGAGGCTCTCGGAGAAGGCCGTTTCTTGGCCAAACTTTCA
TGATGTCGTGTTCCATTTCTGCGATGAGCGTGGAATGCTAGTGAATGCGG
AACTCCAGATGGGCTGGTCAACGCAGTCTCCGAGTTGACAACGGCATTCA
AAAAGCACGGTGAGGCGATAACGGAGCTAACCAAGGCATAGAGCTAAGGC
AGGGATGGCAAACGGCCGCCCGAGGGCAAGCAAGGCGACGAGTTCTCGGA
GGAAAGGCGCAACATCCGCGGCCGGGGCACCCCGCGCAACAGGTTCGCCG
ACAACCAGTGCACATTCTGCGAGAAGGTTGGCCACTGGCAGATGGACTGC
CTCAAAATAAAGGCGTGGCGGGCGGCGAAACACAATGACGACTCTAACTT
CTACTCCAACTCCCATCAGCGTCACACGTCCC

Coding sequence (CDS) from alignment at chr15:574342..578723-

>NO15G02060.1 ID=NO15G02060.1|Name=NO15G02060.1|organism=Nannochloropsis oceanica|type=CDS|length=2277bp|location=Sequence derived from alignment at chr15:574342..578723- (Nannochloropsis oceanica)
ATGGCCATCGTGCCTAGAGCACCGAGGTGCTTCCTCCTGCCGCGGCAAGT
AAAGCTGATAATTGTTGCAGCACTCGTTCTGCTGCTGCTGATCATTGTGC
CAGAAGCTGTTGCCTTTGCCCCTCTAGGAAAGGCTTGCCTGCTACCCGCC
TTGGGGTCCCGACATGCGTTTTCATCCCGGGCGCATACCGCAGCATCTCG
ACAGGACCATCATCAGCACCGAAGCCGGCATAGTAACGGACACGATTCCC
ACCCAGTCTACTCTGACTTTGTCCGCATCGACGGCGACGAGCATGACCCT
CTCCGCCGGCGGGGTTTTGACGTCTCGGTCCGCAACTTTGTACGGCGGGC
CATGGAGACTTTCGAAATTGGCAAGATTGGTAAAGTCGCTGCCTTGGCCG
CGGCACAGTCTGGGAGGGGATGCCCCTCGGGCACCAAAGACTGGCTGCGA
TTCATCAAAGCCTGTCTGTACGAACGGACCTACTTGACCTTGAGTATTTT
TGCGCTAGTGGGGGCGGCGTCTTGCGAGGTAGCCGTGCCGCACTATTCCT
CCAAGGCGCTCAACTCGGTGGTTGTCACAGGAAATATGCAAGATTTTCAT
CAGGCCGTCACTACCGTCATTGCTTTGGGCCTGGCCTCTTCCGCCTTCAC
CTTCGTGCGTGCGGCATTTTTCGGCCTTTCAGGCACCCGTATTGCTACTC
GCGCACGGTCCATGTTGTTGGGGTCGTTGCTGAAGCAGGACATAGCGTTT
TTCGACAGCAAAGACACAGGAGAGCTCACCAATCGCTTGTCGGCGGATTG
TTCGAAGTTTTCCAGTGTAGTCTCGTCTCATGTCAATGTCTTGTTGCGGC
AGTCCATCCAGCTGATCGGGGGGGGCATTTTTCTGTTTCGAATTAATCTC
GGCCTGGCTTTGGTGACCTTCCTGGGCATATTTTTGATTGGTGCCCTGAC
GACTCTGCATGGTGAGTTCATCCGCCGTATGGGTCGACGGAGCCAGGACT
CCCTGGCCAAGGCCAATGCCGTTGCCGGGCAGATCCTCTCTTTGGTTCGT
GTCGTGCGGTCTCATGGGAGCGAGCACCAGGAGCTGTCCCGGTATGGTGC
TCAATTGCGCAACACGGTCAACATGCTCGAAACACATGACTTGGGGCACA
GCCTGTACCGTTCTCTTGTTCGGTTGCTACAGACAGGCCTCCAGGCCACC
GTCATGGGTCTTGGGGCTCGGGCAGTTATGCTGCGGCAGATGACCGGCGA
GCAGCTGACATCGTTTTTGTTTTACGTAAATTTTGTGTCGGCGGCATCAT
TCGATGTGGGCGACCGGTGGACGAGCATTCAGGATGCCATTGGGTCTACA
ACCTCCGTCTTTTCACTGATGGACCGCAAGCCTCGCCTAAGGGTGCGGGA
GGATCTCCGAGGCGCAATAGCAGCAGGGGTCTTGTCCGCGGACACAACGA
CGTGCAAAATGAGTGACGCAGCGCTGCAAGCACCAAGGACGCGGTACAAC
TACATGGCAGACAGCTACGTGCCTTTGGGACGGGTCAACTTTTCGAATGT
CACGTTTGCGTACCCGTTACGGGAAAAGAAGACAGTATTGCATGACATTA
CTTTCGAGATTCGCCCGGGAGAGCGCACAGCAATCGTGGGAGGAAGCGGC
GCCGGGAAAAGTACGTTGATGCGATTGTTGACGCGCTTTTACGATCCAAC
CACGGGTCAGGTGCTGCTGGACGGCCAGGACATCAGCTCCCTCACACAAC
GGGAGCTGACACAGCGAATCTGTTTCCTCCCCCAAGAGCCCCAACTTTTC
CCCATCTCCATCGCGGACAACATCATCTACGGCATGCAGGAAGATTCCTA
CTCCTCGGAAGATATTGAGCAAGCCGCGCGCGAGGCCAATGTACACGACT
TTATCCAATCTCTTCCTGAAAAGTACCAGACACGGGTAGGGGAAGGCTCC
GTCTCACTCAGTGGTGGTGAAAAACAGCGAGTGTGCTTGGCAAGGGCGAT
CATCCGCCGGCCCAACGTGCTTCTGCTCGACGAGCCCACGAGTGCGCTGG
ACGTGACTTCGGAAAAAGTCGTTCAGGAGGCTCTGGACCTCGTGAGCACT
GGTAGGACCGTAGTCATCATCGCGCATCGCCTGTCGACAATCAAGCATGT
GGAGAACATCGTTGTGATGGAGAATGGACGAGTCGCAGAGCAAGGGAATC
ATGCCGTGCTCAAGGCAGCGAACGGCGTCTATTCTAAGTTGCTCAAAACT
TATAAGGACAGCATCATTGACGCATAG

Synonyms

Publications