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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| chr15 | genome | chr15:494272..498039 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO15G01760.2 vs.
Match: EWM22439.1 (Peptidase M16 [Nannochloropsis gaditana]) HSP 1 Score: 775.0 bits (2000), Expect = 1.300e-220 Identity = 383/455 (84.18%), Postives = 416/455 (91.43%), Query Frame = 0
Query: 12 FASLTFIKGVAATKPLSELQVPVTKMTTLENGLRVATQETYGALCTFGVVVDAGSRDEMPGEEDGVCHLFEAMAFKSTDGMSHQQVVSALDDLGAIPTANSSREQLLLSVDVLRNSLPEAFQIFADIALHPKIDVDEVEESKMILGLHLESMAPELMVKEAIQEAAYSGQALGRPHFVTPETLPRLTAEKLRSFQARHFTARNMVLAAAGVEHESFVALARKHFGGLSSGGNHSKRSAAVYRGGEKRIEQPASVDPFTRVAVGFEVAGWHDKDLVAMCVMQILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGACDAGRAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPNYDQVLQWFAQS 467
F T V TKPLSELQ PVTK+TTL+NGLRVATQETYGALCTFGVVVDAGSRDE+ G EDGVCHLFEA AF+ T+ SH++VVSALDDLGAIPTANSSREQ+LLS+DVLRNSLPEA +IF D L+PKID ++EESK ILGLHL+S+APEL+VKEAIQEAAY GQALGRPHFVTPETLPRL+AE L++FQ RHFTAR+MVLAAAGVEHE+FV LA+KHFG L +G KR+ A+Y+GGEKRIEQP S+DPFTRVAVGFEVAGWHDKDLVAMCVMQILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGAC+A RAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFED+GRQ +TYGHREAPEALCRKIDEVKAED+M IARRAISKPVSISAVGKDL+ VPNY+QVLQWFAQS
Sbjct: 81 FGMDTVPSDVPPTKPLSELQAPVTKITTLDNGLRVATQETYGALCTFGVVVDAGSRDELAGREDGVCHLFEATAFRGTEKRSHKEVVSALDDLGAIPTANSSREQMLLSIDVLRNSLPEALEIFGDAVLNPKIDAQDIEESKTILGLHLDSIAPELLVKEAIQEAAYPGQALGRPHFVTPETLPRLSAEGLKAFQTRHFTARSMVLAAAGVEHEAFVDLAKKHFGRLPAGEGAHKRARALYQGGEKRIEQPDSIDPFTRVAVGFEVAGWHDKDLVAMCVMQILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGACEAARAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKIDEVKAEDLMKIARRAISKPVSISAVGKDLRTVPNYEQVLQWFAQS 535
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO15G01760.2 ID=NO15G01760.2|Name=NO15G01760.2|organism=Nannochloropsis oceanica|type=mRNA|length=3246bp AGATACATTTTGATTTGCTTTTTTCCATTTACTGAAGGATAAGTGTTTAC ACACTTTGCCGTCTTGATGGCTTCTTCTGTTTGTGGGCTTTATTCGCCTT CTTCTCAGGCGACGACGTGTCCTCCTCCTTTCCCTTCCCTTCCTTCTTCC AAAAACCCTCATCACTCGCCCGATGCTTCCTCTTCTTCTTCTTCTTCTCT TTCTTCCCCTTCTCCTTCTTTCCCTCCCTTGCTATTCTCTTCTTCTCCTT CGCTTTTTCCCCGTCATCCTTCTCTTCCTTCTCCACCTCCCTTACACCCT CCTTCCACCACCGGGGGGGCGGGGGGGCGCTGCCTGCTCCTGGCATTTTA AATCGCGCCTCCAAACCTTGAATTTGTGGAACGTGTGTGTATGGCACCAC TATCCGAGACGGACGTGCGACTGTCATAGTAGAAGACTGCCTCCCATCTA TACTTTCGCCATCAGTAGCAGCGCAGGTAGTATTGGGAGGGAATTGGGCC ACGACGAAGTGCCTGTTGATAGACGGAGCAACCCGCAGCACCCCTGGTGC GTCCCTTGATGATTGAAGTAGCACTTGATAAGAACCGATTTCCGAGGCGT TGCCCAGAAGCACCTCGTAACTGTCCCCGCTTGCTTCTCCGCATGGCATA CCATCCTCATCCTGGTCGTCCTCATCCAGCTCCCTCCTTGCTCTCTGGAC GTCAGTGACTTGCAGAACGACTCCTGCCTCTGCGGCTTCATTTATTTTGA GCTTCTTCTTAGCAAGCTCCTCAGCATTGAACTTATGGTGGTGGGAGGTG AGAGAGGGGCGTGAATTTAGACGGAGGGAGGGGTAGGAGGTCGAATGGTA GGGGTGGGACGACTTACATCCAGGGGCATGCGAAAAAGCCACAGCTCTAA GTCCTCATTGGCCGTTAGCTCCTCCATTGTCAGCGCCGTCCTGTGTGTGG TAGTGTATGTGTATGTTTATGTGTGCAGTAAGGTGAGTATAGATGGAAAT AAAGAAGCACACCTCCGTCCTAGGTCTCCCGTAGCCAAACGCATGGCTGG AGGCAGGAGGTCACTTACCTCACAGGGACCAATGTTCGGTCGTGCGTGCT CATGGTCTGAGCAAAAAGCTGTTAGGCAACGTCTGTGTAATTGAGGAAGT GGTGATTGAGTTTTGTGGGTTAAGAGGAGTGCTTGCTTGCTTGCTGCATT GGGTCTGGGGCAGTGATGAGCGAGTGGGGCTCGATAACCACACCACCCCG CTGCTTGCTTGCCTAGATACACAATCTCTCAATACACACAGTCTCAGGGC ACTTACGCACACAAACCACGCACAGGCAGATAAGACAGCCTCGCACAGCA ATGGCTCAAGCCCTGCGGAGGATATCCCGCTGCCACTCGACTGCTTTGGC CAGACCGCTGCAGAGGCATGCTCCTGCAAGCCTCGCCTTCCTCGCCCCCC CTGGCCGCCTTCTAAGCCGTGCCAGTGCCGATACCAGCAACCCGGACGAG GCTCTGCTTACGCCTGGCGTCACCACAAGTAAGTCCCAGGTTCCCAAGAC TCTCAAGAAAGATCTCAAGGCCATCGAAGATCGTTTGGCCCGCTTTCGGA TGGACGCAGTATTACCAGGTACGCGGAGATCCCTAGGCGGCAACAGCGGA GTGAAAAAAGGAAAGTGGAGAGGAAGTAAGAGGAAGTATGGGAAAGTACA TAGCTTACACTTGTCGTCTTTTTGCCTCGCTAACTTTCATTAAAGGTGTA GCAGCCACCAAGCCATTAAGCGAATTGCAAGTCCCTGTGACGAAAATGAC GACGCTTGAGAACGGCCTACGCGTGGCCACTCAAGAAACTTATGGCGCGC TCTGCACCTTCGGCGTGGTAGTCGATGCCGGGAGCCGCGACGAAATGCCC GGGGAGGAAGATGGTGTCTGTCACTTGTTCGAGGCCATGGCTTTCAAAAG CACGGACGGCATGAGCCATCAACAAGTTGTCAGCGCATTGGATGACTTAG GGGCTATCCCTACCGCAAACTCGTCACGGGAGCAACTGTTGCTGTCTGTG GATGTGTTAAGAAATTCACTGCCGGAAGCGTTTCAGATTTTTGCAGACAT TGCGTTGCATCCAAAGATTGACGTGGACGAAGTGGAGGAGTCCAAAATGA TTCTAGGCTTGCACCTTGAAAGCATGGCGCCTGAATTAATGGTAAAGGAA GCAATTCAAGAAGCTGCCTATTCGGGCCAAGCTTTGGGGCGGCCACATTT CGTGACACCGGAGACCTTACCTAGGCTGACCGCAGAGAAGCTTCGCTCCT TCCAAGCACGGCATTTCACGGCACGCAACATGGTCCTGGCTGCAGCCGGT GTGGAGCACGAGTCGTTCGTCGCCCTGGCTCGGAAGCATTTTGGAGGGCT TTCTTCCGGGGGGAACCATTCCAAACGATCTGCTGCAGTGTACCGGGGAG GAGAGAAACGGATCGAGCAGCCGGCAAGTGTAGATCCTTTCACGCGCGTC GCGGTGGGGTTTGAAGTAGCGGGATGGCATGACAAGGACTTGGTGGCCAT GTGCGTGATGCAGATTTTGTTGGGAGGCGGAGATTCCTTCTCGGCTGGAG GGCCGGGGAAGGGGATGTATTCACGGTTGTACCGTGAGTTGCTTAATCGA TATTATTGGGTGGAGGGTGCAGAGGCCTTTGTGAATTTACATAACGAGAC AGGGGTGTTAGGGATCGCCGGTGCGTGTGACGCAGGGCGGGCAGGGCAGT TAATGCATGAGTTTTGTGCGCAGATTTGCAAGCTGGCCTTGACGCCTGTG GATCCTGTGGAGTTATCAAGGGCGCGAAATATGTTAAAGTGCAATGTCTT GACGCAATTGGAGTCTAGGATCATTTTATTTGAGGATTTGGGGAGGCAAT TCGTGACCTATGGCCATCGGGAGGCGCCTGAGGCATTGTGTCGAAAGATT GATGAGGTCAAGGCAGAGGACGTGATGAACATTGCCCGACGGGCTATTTC TAAGCCAGTGTCGATTTCGGCTGTGGGTAAGGACTTAAAGAATGTGCCAA ATTATGATCAGGTCTTACAATGGTTTGCACAATCATAGGAAGAGGGGTGG GATGGAGGGAGGTAGAGAGGGAGAGGGACCGAAGGAGAGAGGTAGGGTAA GGAACCGTTAGTGTGTAAGTAGGTGCGCAGGAAGGATATGAAAGGAATAA TCAAAAGTGTGGTGTTGGAAAGAACGAAATGGAATGCAATTCATGA back to topprotein sequence of NO15G01760.2 >NO15G01760.2-protein ID=NO15G01760.2-protein|Name=NO15G01760.2|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp MGKYIAYTCRLFASLTFIKGVAATKPLSELQVPVTKMTTLENGLRVATQE TYGALCTFGVVVDAGSRDEMPGEEDGVCHLFEAMAFKSTDGMSHQQVVSA LDDLGAIPTANSSREQLLLSVDVLRNSLPEAFQIFADIALHPKIDVDEVE ESKMILGLHLESMAPELMVKEAIQEAAYSGQALGRPHFVTPETLPRLTAE KLRSFQARHFTARNMVLAAAGVEHESFVALARKHFGGLSSGGNHSKRSAA VYRGGEKRIEQPASVDPFTRVAVGFEVAGWHDKDLVAMCVMQILLGGGDS FSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGACDAG RAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFED LGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDL KNVPNYDQVLQWFAQS* back to topmRNA from alignment at chr15:494272..498039+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO15G01760.2 ID=NO15G01760.2|Name=NO15G01760.2|organism=Nannochloropsis oceanica|type=mRNA|length=3768bp|location=Sequence derived from alignment at chr15:494272..498039+ (Nannochloropsis oceanica) AGATACATTTTGATTTGCTTTTTTCCATTTACTGAAGGATAAGTGTTTAC
ACACTTTGCCGTCTTGATGGCTTCTTCTGTTTGTGGGCTTTATTCGCCTT
CTTCTCAGGCGACGACGTGTCCTCCTCCTTTCCCTTCCCTTCCTTCTTCC
AAAAACCCTCATCACTCGCCCGATGCTTCCTCTTCTTCTTCTTCTTCTCT
TTCTTCCCCTTCTCCTTCTTTCCCTCCCTTGCTATTCTCTTCTTCTCCTT
CGCTTTTTCCCCGTCATCCTTCTCTTCCTTCTCCACCTCCCTTACACCCT
CCTTCCACCACCGGGGGGGCGGGGGGGCGCTGCCTGCTCCTGGCATTTTA
AATCGCGCCTCCAAACCTTGAATTTGTGGAACGTGTGTGTATGGCACCAC
TATCCGAGACGGACGTGCGACTGTCATAGTAGAAGACTGCCTCCCATCTA
TACTTTCGCCATCAGTAGCAGCGCAGGTAGTATTGGGAGGGAATTGGGCC
ACGACGAAGTGCCTGTTGATAGACGGAGCAACCCGCAGCACCCCTGGTGC
GTCCCTTGATGATTGAAGTAGCACTTGATAAGAACCGATTTCCGAGGCGT
TGCCCAGAAGCACCTCGTAACTGTCCCCGCTTGCTTCTCCGCATGGCATA
CCATCCTCATCCTGGTCGTCCTCATCCAGCTCCCTCCTTGCTCTCTGGAC
GTCAGTGACTTGCAGAACGACTCCTGCCTCTGCGGCTTCATTTATTTTGA
GCTTCTTCTTAGCAAGCTCCTCAGCATTGAACTTATGGTGGTGGGAGGTG
AGAGAGGGGCGTGAATTTAGACGGAGGGAGGGGTAGGAGGTCGAATGGTA
GGGGTGGGACGACTTACATCCAGGGGCATGCGAAAAAGCCACAGCTCTAA
GTCCTCATTGGCCGTTAGCTCCTCCATTGTCAGCGCCGTCCTGTGTGTGG
TAGTGTATGTGTATGTTTATGTGTGCAGTAAGGTGAGTATAGATGGAAAT
AAAGAAGCACACCTCCGTCCTAGGTCTCCCGTAGCCAAACGCATGGCTGG
AGGCAGGAGGTCACTTACCTCACAGGGACCAATGTTCGGTCGTGCGTGCT
CATGGTCTGAGCAAAAAGCTGTTAGGCAACGTCTGTGTAATTGAGGAAGT
GGTGATTGAGTTTTGTGGGTTAAGAGGAGTGCTTGCTTGCTTGCTGCATT
GGGTCTGGGGCAGTGATGAGCGAGTGGGGCTCGATAACCACACCACCCCG
CTGCTTGCTTGCCTAGATACACAATCTCTCAATACACACAGTCTCAGGGC
ACTTACGCACACAAACCACGCACAGGCAGATAAGACAGCCTCGCACAGCA
ATGGCTCAAGCCCTGCGGAGGATATCCCGCTGCCACTCGACTGCTTTGGC
CAGACCGCTGCAGAGGCATGCTCCTGCAAGCCTCGCCTTCCTCGCCCCCC
CTGGCCGCCTTCTAAGCCGTGCCAGTGCCGATACCAGCAACCCGGACGAG
GTACATGGATATTATAATAAGCATACGGGGAGTGGGGGATGGCGTATGCG
GTGTGTGTCGTAGCAATCACATGATGGTAGAGTCCGCTTTCTCACCAGCT
TTTCCCACTATCTCTTCAGGCTCTGCTTACGCCTGGCGTCACCACAAGTA
AGTCCCAGGTTCCCAAGACTCTCAAGAAAGATCTCAAGGCCATCGAAGAT
CGTTTGGCCCGCTTTCGGATGGACGCAGTATTACCAGGTACGCGGAGATC
CCTAGGCGGCAACAGCGGAGTGAAAAAAGGAAAGTGGAGAGGAAGTAAGA
GGAAGTATGGGAAAGTACATAGCTTACACTTGTCGTCTTTTTGCCTCGCT
AACTTTCATTAAAGGTGTAGCAGCCACCAAGCCATTAAGCGAATTGCAAG
TCCCTGTGACGAAAATGACGACGCTTGAGAACGGCCTACGCGTGGCCACT
CAAGAAACTTATGGCGCGGTAAGTCAGTACCGTTATAGTGCCAGAGCATG
CCTGCGGACCGACGTAAGCGGCTATAAATGTGGATATGAAAAGAGAGGAG
ACGAATAAGTGAAGCAAGCGCTTCCTCGGTGATGTGCCCATTCTCAGCAA
TCGCACCGCATACACCACACCGAACAGCTCTGCACCTTCGGCGTGGTAGT
CGATGCCGGGAGCCGCGACGAAATGCCCGGGGAGGAAGATGGTGTCTGTC
ACTTGTTCGAGGCCATGGCTTTCAAAAGCACGGACGGCATGAGCCATCAA
CAAGTTGTCAGCGCATTGGATGACTTAGGGGCTATCCCTACCGCAAACTC
GTCACGGGAGCAACTGTTGCTGTCTGTGGATGTGTTAAGAAATTCACTGC
CGGAAGCGTTTCAGATTTTTGCAGACATTGCGTTGCATCCAAAGATTGGT
AAGTATTATGTTTTGTGAAAAGTGTGCCATAATCGTTTGTGTATTATTTG
TATATGCTTGACTATTTTGTCTCCTGTGACAAGGGGCACCACCAGCATAC
TTTCTCTTATCACTCCTTTCTCTTTGTCTCCCTTTCAGACGTGGACGAAG
TGGAGGAGTCCAAAATGATTCTAGGCTTGCACCTTGAAAGCATGGCGCCT
GAATTAATGGTAAAGGAAGCAATTCAAGAAGCTGCCTATTCGGGCCAAGC
TTTGGGGCGGCCACATTTCGTGACACCGGAGACCTTACCTAGGTGGGTGG
ATGGACGGGTTGATGAGAACGTGAAAAGAGTAATAGAAGGAGATTTGCCG
AGGGATAAAGACCAGGAGTCACCATTACACATTCATGTCTACACAGGCTG
ACCGCAGAGAAGCTTCGCTCCTTCCAAGCACGGCATTTCACGGCACGCAA
CATGGTCCTGGCTGCAGCCGGTGTGGAGCACGAGTCGTTCGTCGCCCTGG
CTCGGAAGCATTTTGGAGGGCTTTCTTCCGGGGGGAACCATTCCAAACGA
TCTGCTGCAGTGTACCGGGGAGGAGAGAAACGGATCGAGCAGCCGGCAAG
TGTAGATCCTTTCACGCGCGTCGCGGTGGGGTTTGAAGTAGCGGGATGGC
ATGACAAGGACTTGGTGGCCATGTGCGTGATGCAGATTTTGTTGGGAGGC
GGAGATTCCTTCTCGGCTGGAGGGCCGGGGAAGGGGATGTATTCACGGTT
GTACCGTGAGTTGCTTAATCGATATTATTGGGTGGAGGGTGCAGAGGCCT
TTGTGAATTTACATAACGAGACAGGGGTGTTAGGGATCGCCGGTGCGTGT
GACGCAGGGCGGGCAGGGCAGTTAATGCATGAGTTTTGTGCGCAGATTTG
CAAGCTGGCCTTGACGCCTGTGGATCCTGTGGAGTTATCAAGGGCGCGAA
ATATGTTAAAGTGCAATGTCTTGACGCAATTGGAGTCTAGGATCATTTTA
TTTGAGGATTTGGGGAGGCAATTCGTGACCTATGGCCATCGGGAGGCGCC
TGAGGCATTGTGTCGAAAGATTGATGAGGTCAAGGCAGAGGACGTGATGA
ACATTGCCCGACGGGCTATTTCTAAGCCAGTGTCGATTTCGGCTGTGGGT
AAGGACTTAAAGAATGTGCCAAATTATGATCAGGTCTTACAATGGTTTGC
ACAATCATAGGAAGAGGGGTGGGATGGAGGGAGGTAGAGAGGGAGAGGGA
CCGAAGGAGAGAGGTAGGGTAAGGAACCGTTAGTGTGTAAGTAGGTGCGC
AGGAAGGATATGAAAGGAATAATCAAAAGTGTGGTGTTGGAAAGAACGAA
ATGGAATGCAATTCATGA back to topCoding sequence (CDS) from alignment at chr15:494272..498039+ >NO15G01760.2 ID=NO15G01760.2|Name=NO15G01760.2|organism=Nannochloropsis oceanica|type=CDS|length=1401bp|location=Sequence derived from alignment at chr15:494272..498039+ (Nannochloropsis oceanica) ATGGGAAAGTACATAGCTTACACTTGTCGTCTTTTTGCCTCGCTAACTTT CATTAAAGGTGTAGCAGCCACCAAGCCATTAAGCGAATTGCAAGTCCCTG TGACGAAAATGACGACGCTTGAGAACGGCCTACGCGTGGCCACTCAAGAA ACTTATGGCGCGCTCTGCACCTTCGGCGTGGTAGTCGATGCCGGGAGCCG CGACGAAATGCCCGGGGAGGAAGATGGTGTCTGTCACTTGTTCGAGGCCA TGGCTTTCAAAAGCACGGACGGCATGAGCCATCAACAAGTTGTCAGCGCA TTGGATGACTTAGGGGCTATCCCTACCGCAAACTCGTCACGGGAGCAACT GTTGCTGTCTGTGGATGTGTTAAGAAATTCACTGCCGGAAGCGTTTCAGA TTTTTGCAGACATTGCGTTGCATCCAAAGATTGACGTGGACGAAGTGGAG GAGTCCAAAATGATTCTAGGCTTGCACCTTGAAAGCATGGCGCCTGAATT AATGGTAAAGGAAGCAATTCAAGAAGCTGCCTATTCGGGCCAAGCTTTGG GGCGGCCACATTTCGTGACACCGGAGACCTTACCTAGGCTGACCGCAGAG AAGCTTCGCTCCTTCCAAGCACGGCATTTCACGGCACGCAACATGGTCCT GGCTGCAGCCGGTGTGGAGCACGAGTCGTTCGTCGCCCTGGCTCGGAAGC ATTTTGGAGGGCTTTCTTCCGGGGGGAACCATTCCAAACGATCTGCTGCA GTGTACCGGGGAGGAGAGAAACGGATCGAGCAGCCGGCAAGTGTAGATCC TTTCACGCGCGTCGCGGTGGGGTTTGAAGTAGCGGGATGGCATGACAAGG ACTTGGTGGCCATGTGCGTGATGCAGATTTTGTTGGGAGGCGGAGATTCC TTCTCGGCTGGAGGGCCGGGGAAGGGGATGTATTCACGGTTGTACCGTGA GTTGCTTAATCGATATTATTGGGTGGAGGGTGCAGAGGCCTTTGTGAATT TACATAACGAGACAGGGGTGTTAGGGATCGCCGGTGCGTGTGACGCAGGG CGGGCAGGGCAGTTAATGCATGAGTTTTGTGCGCAGATTTGCAAGCTGGC CTTGACGCCTGTGGATCCTGTGGAGTTATCAAGGGCGCGAAATATGTTAA AGTGCAATGTCTTGACGCAATTGGAGTCTAGGATCATTTTATTTGAGGAT TTGGGGAGGCAATTCGTGACCTATGGCCATCGGGAGGCGCCTGAGGCATT GTGTCGAAAGATTGATGAGGTCAAGGCAGAGGACGTGATGAACATTGCCC GACGGGCTATTTCTAAGCCAGTGTCGATTTCGGCTGTGGGTAAGGACTTA AAGAATGTGCCAAATTATGATCAGGTCTTACAATGGTTTGCACAATCATA G back to top
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