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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr15 | genome | chr15:480847..484175 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO15G01690.1 vs.
Match: EWM22465.1 (ariadne-like ubiquitin ligase [Nannochloropsis gaditana]) HSP 1 Score: 881.3 bits (2276), Expect = 1.500e-252 Identity = 438/565 (77.52%), Postives = 486/565 (86.02%), Query Frame = 0
Query: 1 MDSSGEESKEYNYQDESGDD--GGSNSMGSGEDEEEYSYSDGEDGGGPSLSIPPPSSSLMDGYKIIDADELRATMSALVGDISSVLAIHPCAAAALLRHNSWNKEAVIDSFCTDSEKAKEKAGIARFVLELQKTDNGQVCGICRDEVHASELVAVGCGHYFCRACYTQYLSSKVGEGICCPLTRCPEYKCSEVVTENIFRALVPPPVLATYLRYNLKSYVDMSNAFRWCPGRGCDYVAMGNSILRSCLCKCGVLFCFRCGEEAHVPATCDDMITWAEKCKNESETANWILANTRKCPKCMTRIEKNQGCNHMTCRQCKFEFCWICMGPWTDHGANTGGYYKCNKYDPAAPTKDEQDGAKAKAELDRYLHYYKRYDNHHKAQEYATKQEEEIERRMMRLQETDGSRWIDVQFLKAANEKLVECRRVLKYTYVFGYYLPEGTARKRLFEHHQENLEKFTEHLSWLSEQGLEEFKKEEKRSEVVNYTRVTETFLKNLLKSVEDGLMEEEVEE------EGGGDKGKKKG-------GEGEKEAKSTAAVSSGGGGGRGRGRMSGAVEA 551
M+SS + +EY YQDESG++ GG S E+EEEYSYSDGE GG P + +PPPSSS+ DG K+IDADELRATMSAL+ DISSVLAIHPCAAAALLRH +WNKE+VIDSFCTD ++AKEKAGI RFV +LQ +D G++CGICR++V A LVA+GCGH+FCR C+TQYL SKV EG+ CPLTRCPEY+C E+VTEN FR LVPP LA YLRY+LKS+VD+ +AFRWCPGRGCD+VAMGNS LR+CLCKCG+LFCFRCGEEAHVPA+C+DM+TW EKCKNESETANWILANTRKCPKC TRIEKNQGCNHMTCRQCKFEFCWICMGPWT+HGANTGGYYKCNKYDP+ PTKDEQDGAKAKAELDRYLHYY+RYDNHHKAQEYATKQEEEIERRMMRLQETDGSRWIDVQFLK ANEKLVECRRVLKYTYVFGYYLPEGTARKRLFEHHQENLEKFTEHLSWLSEQ LEEFKKEEKRSEVVNYTRVTETFLKNLLKSVEDGLM+E+ E+ EG + G++ G GE +E + T G GGG GR R SG A
Sbjct: 4 MESS--DGEEYTYQDESGEEVVGGVESQ---EEEEEYSYSDGEGGGAP-VPLPPPSSSMADGCKVIDADELRATMSALIDDISSVLAIHPCAAAALLRHYNWNKESVIDSFCTDPDQAKEKAGIMRFVPDLQTSDKGRLCGICREDVPAEALVALGCGHFFCRGCFTQYLVSKVEEGMGCPLTRCPEYRCPEMVTENFFRVLVPPATLAAYLRYSLKSFVDICSAFRWCPGRGCDFVAMGNSSLRACLCKCGMLFCFRCGEEAHVPASCEDMVTWVEKCKNESETANWILANTRKCPKCATRIEKNQGCNHMTCRQCKFEFCWICMGPWTEHGANTGGYYKCNKYDPSTPTKDEQDGAKAKAELDRYLHYYQRYDNHHKAQEYATKQEEEIERRMMRLQETDGSRWIDVQFLKVANEKLVECRRVLKYTYVFGYYLPEGTARKRLFEHHQENLEKFTEHLSWLSEQSLEEFKKEEKRSEVVNYTRVTETFLKNLLKSVEDGLMDEDGEDMEEGGWEGKAEPGRRAGAAGGGQVGEAAEEGRPTLPSRDGAGGG-GRARRSGVARA 561
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO15G01690.1 ID=NO15G01690.1|Name=NO15G01690.1|organism=Nannochloropsis oceanica|type=mRNA|length=2737bp
CACAACACAGCAGAAGCGGCGGCTGTACAAGCACACGGAGGGTGCGGCCG
CATCCACAAGAGCGGGCAGGGAGTAGAAGGCGCAACCAACAAGAGCAGCA
GAAGGAACCATGGATAGTAGCGGCGAGGAAAGCAAGGAGTACAACTACCA
AGACGAGTCAGGGGATGACGGTGGGAGCAACAGCATGGGCAGTGGGGAAG
ACGAAGAAGAATACAGCTACTCGGACGGAGAAGACGGCGGGGGGCCCTCC
CTCTCCATCCCCCCCCCCTCCTCCTCCCTTATGGACGGGTATAAAATCAT
AGATGCTGATGAGTTGCGTGCCACCATGTCAGCGCTCGTCGGAGACATCT
CCTCCGTCCTTGCTATCCACCCTTGTGCGGCCGCGGCCTTACTCCGCCAT
AACAGCTGGAACAAGGAAGCGGTCATCGATTCCTTCTGCACCGATTCGGA
GAAAGCCAAGGAGAAAGCCGGTATTGCCCGGTTTGTTCTCGAGTTGCAAA
AGACGGACAACGGCCAAGTTTGTGGCATCTGCCGCGATGAGGTCCATGCC
TCGGAGCTGGTCGCAGTGGGGTGTGGCCATTACTTTTGCCGCGCGTGTTA
CACGCAGTACTTATCTTCGAAGGTGGGCGAGGGGATTTGCTGTCCCTTGA
CGCGGTGCCCGGAGTACAAATGTTCGGAGGTGGTGACGGAGAACATCTTT
CGGGCCCTCGTGCCCCCCCCAGTGTTGGCGACGTATTTGAGATATAACCT
GAAGAGCTACGTGGACATGAGCAATGCTTTCCGATGGTGCCCGGGAAGGG
GCTGTGATTATGTTGCAATGGGGAACAGCATCTTGCGGTCGTGCTTGTGC
AAGTGCGGGGTATTGTTCTGTTTCCGGTGTGGAGAGGAGGCGCATGTCCC
GGCGACTTGCGACGATATGATCACATGGGCCGAGAAGTGCAAGAATGAAA
GTGAGACGGCGAACTGGATTTTGGCCAACACTAGGAAATGCCCCAAATGC
ATGACACGGATCGAGAAAAACCAGGGCTGCAACCACATGACCTGCCGCCA
GTGTAAGTTCGAGTTCTGTTGGATCTGCATGGGCCCTTGGACGGACCACG
GGGCAAACACCGGGGGCTACTACAAGTGCAACAAATACGACCCCGCCGCC
CCCACCAAGGACGAGCAAGATGGCGCAAAGGCCAAGGCGGAGCTGGACCG
GTACCTGCACTACTACAAGCGGTACGACAATCACCACAAGGCCCAAGAAT
ACGCGACCAAGCAAGAGGAAGAGATCGAACGGCGAATGATGCGCCTCCAG
GAAACGGACGGCTCCCGGTGGATCGACGTGCAGTTCCTCAAGGCGGCCAA
CGAGAAGCTGGTGGAGTGCCGGCGTGTGCTCAAGTACACGTACGTCTTCG
GCTACTACCTCCCAGAGGGAACGGCGAGGAAGAGGCTCTTCGAGCACCAT
CAAGAGAACCTGGAAAAATTCACCGAGCACCTGTCGTGGTTGTCGGAGCA
GGGTTTGGAGGAGTTTAAGAAGGAGGAGAAGAGGAGCGAGGTGGTGAATT
ACACCAGGGTGACGGAGACGTTCCTGAAGAATTTGTTGAAGAGCGTTGAG
GATGGGCTCATGGAAGAGGAGGTGGAGGAGGAGGGAGGGGGGGACAAGGG
GAAGAAGAAGGGAGGGGAGGGGGAGAAGGAGGCGAAGAGTACCGCGGCGG
TGAGCAGTGGAGGAGGAGGAGGAAGAGGGAGGGGACGGATGAGTGGGGCG
GTGGAGGCGTGAGGTGAGGGAAGGAGGGTGGAAAGGAAGAAAGGAGGGAA
TAAAGGATATCAACAGGTGTATATACATGGCAAAGGGGAAGAGTGGGAGG
AGGAAAGGGAGGGGGGGACGGAGGAATGGACGGAGGGCGTGTCAATATGA
TGCATCTCGCGCTGTACGTCTTGATAAATGATCGAGAGACGGAGGGAGGA
AGAGGGGAAGACAGGAAAAAAGTGTATGTATGTTTTCTATCTAAACCAGG
AGGAGTGATAGTGAAAGGGGGGGGGGAGAAGGGAGGCTTCTGTGCAGTGT
TTGAAGTAGGTCACGTATAGTGTAATGAGCCAGCCAGCCTGCCATGAAGA
AAGAGATATGGGTGCCGGTCGTTGGGGGTGCCTGCCTGGTTGTTCCGGAC
TAAGTGGATTCGTGCCCGGTTAGGAGAGAGAGGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGGAGGGGATTGGTAAGGAAGGGGAAGAGGGGATGTCAGAC
GGATGCTGTTGCATTTGAGGAAGCAATATCTCTGTTGACTTCCTCTTTTT
GTCTTTCTCCTCGGAGATCTACTGATGTAAAACATATCCTTGGTTGGGGG
GTGAGAGCAAAGACGGGCCGCTGCGGCCGACATGCACGCGTGGAAAGTGG
CGCACGAAAAACATCAATCCTTTCAGAGAAGAGGAACTAGAGGAAGGAAA
CTAAGATGCGAAGCGACGAGGAAGCGCCAAATGGAATAGAGTGGAGAGAT
GATGGAGAGAGAGAGATAGGGAGAGAGATAGACAAAGGGAAAGAAAATAA
GGTGGAGAGAAGGGGGAAAAGAGGTGAAAGACAGCAGCTCAGGAATAGAA
ATATAGCGGGTGTATGTGTTTGATGCGATACCATGGCATGAAGAGAAGAC
GGAGGAGACGAACGAAACAATCAAAACGCCGGGTGCTTCGCAAGAAAAAT
CGGCCCTGCCCGCGGTCTGTACAACAGTCATTCTCAC back to topprotein sequence of NO15G01690.1 >NO15G01690.1-protein ID=NO15G01690.1-protein|Name=NO15G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=551bp
MDSSGEESKEYNYQDESGDDGGSNSMGSGEDEEEYSYSDGEDGGGPSLSI
PPPSSSLMDGYKIIDADELRATMSALVGDISSVLAIHPCAAAALLRHNSW
NKEAVIDSFCTDSEKAKEKAGIARFVLELQKTDNGQVCGICRDEVHASEL
VAVGCGHYFCRACYTQYLSSKVGEGICCPLTRCPEYKCSEVVTENIFRAL
VPPPVLATYLRYNLKSYVDMSNAFRWCPGRGCDYVAMGNSILRSCLCKCG
VLFCFRCGEEAHVPATCDDMITWAEKCKNESETANWILANTRKCPKCMTR
IEKNQGCNHMTCRQCKFEFCWICMGPWTDHGANTGGYYKCNKYDPAAPTK
DEQDGAKAKAELDRYLHYYKRYDNHHKAQEYATKQEEEIERRMMRLQETD
GSRWIDVQFLKAANEKLVECRRVLKYTYVFGYYLPEGTARKRLFEHHQEN
LEKFTEHLSWLSEQGLEEFKKEEKRSEVVNYTRVTETFLKNLLKSVEDGL
MEEEVEEEGGGDKGKKKGGEGEKEAKSTAAVSSGGGGGRGRGRMSGAVEA
* back to topmRNA from alignment at chr15:480847..484175+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO15G01690.1 ID=NO15G01690.1|Name=NO15G01690.1|organism=Nannochloropsis oceanica|type=mRNA|length=3329bp|location=Sequence derived from alignment at chr15:480847..484175+ (Nannochloropsis oceanica)
CACAACACAGCAGAAGCGGCGGCTGTACAAGCACACGGAGGGTGCGGCCG
CATCCACAAGAGCGGGCAGGGAGTAGAAGGTAAGAGCGGCAAAGGGTATA
GGGTCGGGTTTGTGGAGGATGATGGAGGGCGAAGGACTAGAGGGTTTCAC
ACGCCTATATCGCAAGACGTCTGTGTGCCGCGCGCAAGCCATGCCTTGAA
TGTGCGTCAATGCTGCTGGCCGTGCTGTTTATTTTCAAGAGCCGGGATTG
TTGGCCGTGAGTGCCTTGGCCAGAGTCAGGCCCGTCTACCTTCCCGCATG
TCCTCTCCTGCCGGGGAGATCTGCACTCCGACTGCCCTCACCCGAACTCA
CTATCCTCCCCTCCCATTTCCTTTCCCCAACAAGGCGCAACCAACAAGAG
CAGCAGAAGGAACCATGGATAGTAGCGGCGAGGAAAGCAAGGAGTACAAC
TACCAAGACGAGTCAGGGGATGACGGTGGGAGCAACAGCATGGGCAGTGG
GGAAGACGAAGAAGAATACAGCTACTCGGACGGAGAAGACGGCGGGGGGC
CCTCCCTCTCCATCCCCCCCCCCTCCTCCTCCCTTATGGACGGGTATAAA
ATCATAGATGCTGATGAGTTGCGTGCCACCATGTCAGCGCTCGTCGGAGA
CATCTCCTCCGTCCTTGCTATCCACCCTTGTGCGGCCGCGGCCTTACTCC
GCCATAACAGCTGGAACAAGGAAGCGGTCATCGATTCCTTCTGCACCGAT
TCGGAGAAAGCCAAGGAGAAAGCCGGTATTGCCCGGTTTGTTCTCGAGTT
GCAAAAGACGGACAACGGCCAAGTTTGTGGCATCTGCCGCGATGAGGTCC
ATGCCTCGGAGCTGGTCGCAGTGGGGTGTGGCCATTACTTTTGCCGCGCG
TGTTACACGCAGTACTTATCTTCGAAGGTGGGCGAGGGGATTTGCTGTCC
CTTGACGCGGTGCCCGGAGTACAAATGTTCGGAGGTGGTGACGGAGAACA
TCTTTCGGGCCCTCGTGCCCCCCCCAGTGTTGGCGACGTATTTGAGATAT
AACCTGAAGAGCTACGTGGACATGAGCAATGCTTTCCGATGGTGCCCGGG
AAGGGGCTGTGATTATGTTGCAATGGGGAACAGCATCTTGCGGTCGTGCT
TGTGCAAGTGCGGGGTATTGTTCTGTTTCCGGTGTGGAGAGGAGGCGCAT
GTCCCGGCGACTTGCGACGATATGATCACATGGGCCGAGAAGTGCAAGAA
TGAAAGTGAGACGGCGAACTGGATTTTGGCCAACACTAGGAAATGCCCCA
AATGCATGACACGGATCGAGAAAAACCAGGTTTGTACTACCCACCCCTCC
CTCCTTCCTTCCCTCTCTCCTTTCTTCCCTCCTTCCCTCCCCCCTGAGGC
CCTGAAGAGAGCTCGGTCATTTCAACTCCTGAACCTTTCCTCCCTCCCTC
CTTTCTCCCCAGGGCTGCAACCACATGACCTGCCGCCAGTGTAAGTTCGA
GTTCTGTTGGATCTGCATGGGCCCTTGGACGGACCACGGGGCAAACACCG
GGGGCTACTACAAGTGCAACAAATACGACCCCGCCGCCCCCACCAAGGAC
GAGCAAGATGGCGCAAAGGCCAAGGCGGAGGTAAGCACTCTCTTCGCCTT
TCCCGTTCTGGTTCTCCCTGTTCTCCTTCACCCTTCTTCCCTTCCTCTCT
CGAACACGCAGAGAAGTTCGAACGATGGAGGCACTCATCCTCCTCCCTTC
CCTCTTTCCCTCCCTCCCTCCCTCCAACTTCTAGCTGGACCGGTACCTGC
ACTACTACAAGCGGTACGACAATCACCACAAGGCCCAAGAATACGCGACC
AAGCAAGAGGAAGAGATCGAACGGCGAATGATGCGCCTCCAGGAAACGGA
CGGCTCCCGGTGGATCGACGTGCAGTTCCTCAAGGCGGCCAACGAGAAGC
TGGTGGAGTGCCGGCGTGTGCTCAAGTACACGTACGTCTTCGGCTACTAC
CTCCCAGAGGGAACGGCGAGGAAGAGGCTCTTCGAGCACCATCAAGAGAA
CCTGGAAAAATTCACCGAGCACCTGTCGTGGTTGTCGGAGCAGGGTTTGG
AGGAGTTTAAGAAGGAGGAGAAGAGGAGCGAGGTGGTGAATTACACCAGG
GTGACGGAGACGTTCCTGAAGAATTTGTTGAAGAGCGTTGAGGATGGGCT
CATGGAAGAGGAGGTGGAGGAGGAGGGAGGGGGGGACAAGGGGAAGAAGA
AGGGAGGGGAGGGGGAGAAGGAGGCGAAGAGTACCGCGGCGGTGAGCAGT
GGAGGAGGAGGAGGAAGAGGGAGGGGACGGATGAGTGGGGCGGTGGAGGC
GTGAGGTGAGGGAAGGAGGGTGGAAAGGAAGAAAGGAGGGAATAAAGGAT
ATCAACAGGTGTATATACATGGCAAAGGGGAAGAGTGGGAGGAGGAAAGG
GAGGGGGGGACGGAGGAATGGACGGAGGGCGTGTCAATATGATGCATCTC
GCGCTGTACGTCTTGATAAATGATCGAGAGACGGAGGGAGGAAGAGGGGA
AGACAGGAAAAAAGTGTATGTATGTTTTCTATCTAAACCAGGAGGAGTGA
TAGTGAAAGGGGGGGGGGAGAAGGGAGGCTTCTGTGCAGTGTTTGAAGTA
GGTCACGTATAGTGTAATGAGCCAGCCAGCCTGCCATGAAGAAAGAGATA
TGGGTGCCGGTCGTTGGGGGTGCCTGCCTGGTTGTTCCGGACTAAGTGGA
TTCGTGCCCGGTTAGGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGGAGGGGATTGGTAAGGAAGGGGAAGAGGGGATGTCAGACGGATGCTG
TTGCATTTGAGGAAGCAATATCTCTGTTGACTTCCTCTTTTTGTCTTTCT
CCTCGGAGATCTACTGATGTAAAACATATCCTTGGTTGGGGGGTGAGAGC
AAAGACGGGCCGCTGCGGCCGACATGCACGCGTGGAAAGTGGCGCACGAA
AAACATCAATCCTTTCAGAGAAGAGGAACTAGAGGAAGGAAACTAAGATG
CGAAGCGACGAGGAAGCGCCAAATGGAATAGAGTGGAGAGATGATGGAGA
GAGAGAGATAGGGAGAGAGATAGACAAAGGGAAAGAAAATAAGGTGGAGA
GAAGGGGGAAAAGAGGTGAAAGACAGCAGCTCAGGAATAGAAATATAGCG
GGTGTATGTGTTTGATGCGATACCATGGCATGAAGAGAAGACGGAGGAGA
CGAACGAAACAATCAAAACGCCGGGTGCTTCGCAAGAAAAATCGGCCCTG
CCCGCGGTCTGTACAACAGTCATTCTCAC back to topCoding sequence (CDS) from alignment at chr15:480847..484175+ >NO15G01690.1 ID=NO15G01690.1|Name=NO15G01690.1|organism=Nannochloropsis oceanica|type=CDS|length=1653bp|location=Sequence derived from alignment at chr15:480847..484175+ (Nannochloropsis oceanica)
ATGGATAGTAGCGGCGAGGAAAGCAAGGAGTACAACTACCAAGACGAGTC
AGGGGATGACGGTGGGAGCAACAGCATGGGCAGTGGGGAAGACGAAGAAG
AATACAGCTACTCGGACGGAGAAGACGGCGGGGGGCCCTCCCTCTCCATC
CCCCCCCCCTCCTCCTCCCTTATGGACGGGTATAAAATCATAGATGCTGA
TGAGTTGCGTGCCACCATGTCAGCGCTCGTCGGAGACATCTCCTCCGTCC
TTGCTATCCACCCTTGTGCGGCCGCGGCCTTACTCCGCCATAACAGCTGG
AACAAGGAAGCGGTCATCGATTCCTTCTGCACCGATTCGGAGAAAGCCAA
GGAGAAAGCCGGTATTGCCCGGTTTGTTCTCGAGTTGCAAAAGACGGACA
ACGGCCAAGTTTGTGGCATCTGCCGCGATGAGGTCCATGCCTCGGAGCTG
GTCGCAGTGGGGTGTGGCCATTACTTTTGCCGCGCGTGTTACACGCAGTA
CTTATCTTCGAAGGTGGGCGAGGGGATTTGCTGTCCCTTGACGCGGTGCC
CGGAGTACAAATGTTCGGAGGTGGTGACGGAGAACATCTTTCGGGCCCTC
GTGCCCCCCCCAGTGTTGGCGACGTATTTGAGATATAACCTGAAGAGCTA
CGTGGACATGAGCAATGCTTTCCGATGGTGCCCGGGAAGGGGCTGTGATT
ATGTTGCAATGGGGAACAGCATCTTGCGGTCGTGCTTGTGCAAGTGCGGG
GTATTGTTCTGTTTCCGGTGTGGAGAGGAGGCGCATGTCCCGGCGACTTG
CGACGATATGATCACATGGGCCGAGAAGTGCAAGAATGAAAGTGAGACGG
CGAACTGGATTTTGGCCAACACTAGGAAATGCCCCAAATGCATGACACGG
ATCGAGAAAAACCAGGGCTGCAACCACATGACCTGCCGCCAGTGTAAGTT
CGAGTTCTGTTGGATCTGCATGGGCCCTTGGACGGACCACGGGGCAAACA
CCGGGGGCTACTACAAGTGCAACAAATACGACCCCGCCGCCCCCACCAAG
GACGAGCAAGATGGCGCAAAGGCCAAGGCGGAGCTGGACCGGTACCTGCA
CTACTACAAGCGGTACGACAATCACCACAAGGCCCAAGAATACGCGACCA
AGCAAGAGGAAGAGATCGAACGGCGAATGATGCGCCTCCAGGAAACGGAC
GGCTCCCGGTGGATCGACGTGCAGTTCCTCAAGGCGGCCAACGAGAAGCT
GGTGGAGTGCCGGCGTGTGCTCAAGTACACGTACGTCTTCGGCTACTACC
TCCCAGAGGGAACGGCGAGGAAGAGGCTCTTCGAGCACCATCAAGAGAAC
CTGGAAAAATTCACCGAGCACCTGTCGTGGTTGTCGGAGCAGGGTTTGGA
GGAGTTTAAGAAGGAGGAGAAGAGGAGCGAGGTGGTGAATTACACCAGGG
TGACGGAGACGTTCCTGAAGAATTTGTTGAAGAGCGTTGAGGATGGGCTC
ATGGAAGAGGAGGTGGAGGAGGAGGGAGGGGGGGACAAGGGGAAGAAGAA
GGGAGGGGAGGGGGAGAAGGAGGCGAAGAGTACCGCGGCGGTGAGCAGTG
GAGGAGGAGGAGGAAGAGGGAGGGGACGGATGAGTGGGGCGGTGGAGGCG
TGA back to top
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