NO15G01680.1, NO15G01680.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G01680.1
Unique NameNO15G01680.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length667
Alignment locationchr15:478667..479865 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:478667..479865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G01680.1 vs.
Match: EWM22493.1 (n-acetyltransferase 5 [Nannochloropsis gaditana])

HSP 1 Score: 327.8 bits (839), Expect = 2.100e-86
Identity = 157/176 (89.20%), Postives = 167/176 (94.89%), Query Frame = 0 
Query:    1 MGTLRRFTCEDLLRFNNINLDVLTETYNLGFYLQYLSTWPDYFIVEEAPHKEG-RLTSYIMGKAEGKGEKWHGHVTAVTVAPEFRRLGRARLMMDLLEEVSNEGYHAYFVDLFVRVSNTLAIRMYEKFGYSVYRRVLGYYSGEEDAFDMRKALPRDVHKKSVIPLTRPVTPAELEW 176
            MGTLRRFTC+DLLRFNN+NLDVLTETYNLGFYLQYLSTWP+YF+VEEAPH  G RLTSYIMGKAEGKGE WHGHVTAVTVAPE+RRLGRARLMMDLLEEVS EGY+AYFVDLFVRVSNTLAIRMYE FGYSVYR+VLGYYSGEEDA+DMRKALPRD  K+SVIPLT PVTPA+LEW
Sbjct:    1 MGTLRRFTCDDLLRFNNVNLDVLTETYNLGFYLQYLSTWPEYFLVEEAPHAGGKRLTSYIMGKAEGKGENWHGHVTAVTVAPEYRRLGRARLMMDLLEEVSTEGYNAYFVDLFVRVSNTLAIRMYENFGYSVYRQVLGYYSGEEDAYDMRKALPRDRDKRSVIPLTHPVTPADLEW 176
The following BLAST results are available for this feature:
BLAST of NO15G01680.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22493.12.100e-8689.20n-acetyltransferase 5 [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01680NO15G01680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G01680.1NO15G01680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G01680.1.cds1NO15G01680.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01680.1.cds2NO15G01680.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01680.1.cds3NO15G01680.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G01680.1 ID=NO15G01680.1|Name=NO15G01680.1|organism=Nannochloropsis oceanica|type=mRNA|length=667bp
CAGAGGTCAAGGCATACACCTGTCTCTTCATAAAGCCGTCATTGCAGCCG
TCGCCATCCAATGGGTACCTTGCGTCGCTTCACCTGCGAGGATCTCCTCC
GTTTTAACAACATCAACCTCGACGTGCTGACGGAAACGTACAACCTGGGG
TTCTACCTGCAGTACCTTTCGACATGGCCCGATTATTTTATTGTCGAAGA
AGCCCCCCACAAGGAAGGGCGTCTCACTTCCTACATAATGGGGAAAGCTG
AAGGAAAGGGAGAAAAATGGCATGGGCACGTGACGGCCGTTACGGTCGCG
CCAGAATTCCGACGCTTGGGCCGCGCCAGACTGATGATGGACTTGTTGGA
AGAAGTGTCGAATGAGGGGTACCATGCTTATTTTGTGGATTTGTTTGTGC
GGGTGTCCAATACGTTGGCCATACGGATGTATGAGAAGTTCGGGTATTCT
GTTTATCGGCGAGTGTTGGGCTACTACTCGGGGGAAGAGGACGCGTTTGA
CATGCGGAAAGCCCTCCCACGAGACGTGCACAAAAAGAGTGTAATACCAC
TCACACGGCCCGTCACCCCCGCAGAGCTTGAATGGTGATATCTATGGAAT
GAAGTATCATCGGTACCGGCCAAATCATAAATTAAAAAACGGGAAACGAC
AGACACCTGGGGAGAGA
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protein sequence of NO15G01680.1

>NO15G01680.1-protein ID=NO15G01680.1-protein|Name=NO15G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=176bp
MGTLRRFTCEDLLRFNNINLDVLTETYNLGFYLQYLSTWPDYFIVEEAPH
KEGRLTSYIMGKAEGKGEKWHGHVTAVTVAPEFRRLGRARLMMDLLEEVS
NEGYHAYFVDLFVRVSNTLAIRMYEKFGYSVYRRVLGYYSGEEDAFDMRK
ALPRDVHKKSVIPLTRPVTPAELEW*
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mRNA from alignment at chr15:478667..479865-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G01680.1 ID=NO15G01680.1|Name=NO15G01680.1|organism=Nannochloropsis oceanica|type=mRNA|length=1199bp|location=Sequence derived from alignment at chr15:478667..479865- (Nannochloropsis oceanica)
CAGAGGTCAAGGCATACACCTGTCTCTTCATAAAGCCGTCATTGCAGCCG
TCGCCATCCAATGGTAAGATTTGGGCCCTTTGTTTAACCCCAATCTTCCT
TTCCCGCTTCCTGCCCGATTTGCGCCCACGTAAAGCATCTCCTTAAAGGC
CTTTACATTACTACCTGCTCCTTCCATGCTCCTGCTCCTACTCCCCTCGA
TCCATACTCATCTTCTTTCAAGCCACAAACAAGAATATCTCCCATATATT
TAATCCAGAATTTCTTGCGTCGGTTCACATACGAAGATCTCCTCTTTAAC
AACATCAACCTTGTGGTCCTGACGAAAACACACGCACTGATATGTCTTGA
GTCCATCTCGTTCCTCTCTGCACGCTTATCCCTCTCTCATACTCCACGCG
AATTAGGGTACCTTGCGTCGCTTCACCTGCGAGGATCTCCTCCGTTTTAA
CAACATCAACCTCGACGTGCTGACGGAAACGTACAACCTGGGGTTCTACC
TGCAGTACCTTTCGACATGGCCCGATTATTTTATTGTCGAAGAAGCCCCC
CACAAGGAAGGGCGTCTCACTTCCTACATAATGGGGAAAGCTGAAGGAAA
GGGAGAAAAATGGCATGGGCACGTGACGGCCGTTACGGTCGCGCCAGAAT
TCCGACGCTTGGGCCGCGCCAGACTGATGATGGACTTGTTGGAAGAAGTG
TCGAATGAGGGGTACCATGCTTATTTTGTGGATTTGTTTGTGCGGGTGTC
CAATACGTTGGCCATACGGATGTATGAGAAGTTCGGGTATTCTGTTTATC
GGCGAGTGTTGGGCTACTACTCGGGGGAAGAGGACGCGTTTGGTAGGTGC
GTGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GAAAGGGGAGTGATTCAATTCGTTATCACTCTCTTTTTCTCACTACATGT
ATACAAACATATACTTTTATCCTTTCAAACGCACGCACCCCCCCCCTTCA
TTTCCCCTGTCGCTTCTCCCCGACCACACAGACATGCGGAAAGCCCTCCC
ACGAGACGTGCACAAAAAGAGTGTAATACCACTCACACGGCCCGTCACCC
CCGCAGAGCTTGAATGGTGATATCTATGGAATGAAGTATCATCGGTACCG
GCCAAATCATAAATTAAAAAACGGGAAACGACAGACACCTGGGGAGAGA
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Coding sequence (CDS) from alignment at chr15:478667..479865-

>NO15G01680.1 ID=NO15G01680.1|Name=NO15G01680.1|organism=Nannochloropsis oceanica|type=CDS|length=528bp|location=Sequence derived from alignment at chr15:478667..479865- (Nannochloropsis oceanica)
ATGGGTACCTTGCGTCGCTTCACCTGCGAGGATCTCCTCCGTTTTAACAA
CATCAACCTCGACGTGCTGACGGAAACGTACAACCTGGGGTTCTACCTGC
AGTACCTTTCGACATGGCCCGATTATTTTATTGTCGAAGAAGCCCCCCAC
AAGGAAGGGCGTCTCACTTCCTACATAATGGGGAAAGCTGAAGGAAAGGG
AGAAAAATGGCATGGGCACGTGACGGCCGTTACGGTCGCGCCAGAATTCC
GACGCTTGGGCCGCGCCAGACTGATGATGGACTTGTTGGAAGAAGTGTCG
AATGAGGGGTACCATGCTTATTTTGTGGATTTGTTTGTGCGGGTGTCCAA
TACGTTGGCCATACGGATGTATGAGAAGTTCGGGTATTCTGTTTATCGGC
GAGTGTTGGGCTACTACTCGGGGGAAGAGGACGCGTTTGACATGCGGAAA
GCCCTCCCACGAGACGTGCACAAAAAGAGTGTAATACCACTCACACGGCC
CGTCACCCCCGCAGAGCTTGAATGGTGA
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Synonyms
Publications