NO15G01670.1, NO15G01670.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G01670.1
Unique NameNO15G01670.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2020
Alignment locationchr15:476414..478645 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:476414..478645 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G01670.1 vs.
Match: EWM22482.1 (peptidylprolyl isomerase-like 2 [Nannochloropsis gaditana])

HSP 1 Score: 901.0 bits (2327), Expect = 2.100e-258
Identity = 488/654 (74.62%), Postives = 545/654 (83.33%), Query Frame = 0 
Query:    1 MGKKQHSKDRMFLTATEWKELGGKRETAGRSSYRPLAFDSCALSLQPFETPVCTPEGVLFDILNLFPYVQKHKKSPITGESMTSKEIVRLNMAKNNGGKWHCPVTFKEFTDHTHVVAVKPSGNVYAYEAVEELNIKRKNWTDLMTGEPFTRKDIITLQDPGNATHMSLRDISNFKHLEEMRAEEAARVAGESADQKVTSTIRTNASTEMVIKEFQKQKRAREDEEALKAAEAEAASVDAQGREAEEEEELRKKGGGGATKKRRLILIQDLHPGKAITTGAAAASFTATGVDLATENTCRPASEEEIRLVRYKYARKLGKKGYVQLQTTLGNVNLEIHCDFVPRTSENFLGLCLRGFYDG-----------------GWKGRGDGLEFGGGGGGEAGAQGG---GFKDEFDSRLVHDKRGILSMANSGKDTNRSQFFITFKGCRHLDNKHAVFGRVVGGMDVLKKIEEVEVGKEDKPKEEVKIIKAVAFVNPFEESDKLFDAFIEEQRRERLAKEAFWKNNNALGFTRKKEG-GEGGRDVGMERSAQEVAEAERTGGFYSQPGPQASAGWGGVGKYLSGGGGGGGGKDGGRKMTVLPQKVAAVGSEAEYRQLLQGPSPHPKESSKAFQQQAL--EGGGGKGKKQQSKGFGDFEGW 632
            MGKKQHSKDRMFLTATEWKELGGKRE AGRSSYRPLAFDSCALSLQP+ETPVCTPEGVLFDILNLFPYVQKHKK+PITG SMT+KEIVRL MAKN  GKWHCPVTFKEFTDHTHVVAVKPSGNVYAYEAVEELNI+RKNWTDLMTGE FTRKDIITLQDP NA HM+LRDISNFKHLEE+RAEE ARVAG SA++K+ S+IRTNASTEMV+ EFQ+Q+R RE+ EAL+AA+AEAA+V+ + +EAEEEEELR+KGGGGATK+RR ILI+DLHPGK++TTG AAASFTATGVDLAT NTCR A+EEE R VRYK+ARKLGKKGYVQLQT+LGN+NLEIHCDFVPRT+ENFLGLCLRGFYDG                    GRG    +  GGG E G +GG   GFKDEFDSRL HDKRG+LSMANSGKDTNRSQFFITFK CRHLDNKH VFGRVVGGMDVL ++E VEVGKED+PKEEVK++KAVA VNP EESD  FDAF+E +R+ER AK+AF ++NNALGFTRK +G GE G  V    SA+E A+AERT GFYSQPGPQ S G  GVG+YL  G G G G+ GG   TVLPQ+ A VGSEA Y Q + GP+ H KESSKAFQ+ A   E  GG  K++ +  FG+FEGW
Sbjct:    1 MGKKQHSKDRMFLTATEWKELGGKREAAGRSSYRPLAFDSCALSLQPYETPVCTPEGVLFDILNLFPYVQKHKKNPITGHSMTAKEIVRLTMAKNAEGKWHCPVTFKEFTDHTHVVAVKPSGNVYAYEAVEELNIRRKNWTDLMTGESFTRKDIITLQDPSNAAHMALRDISNFKHLEEVRAEEQARVAGASAEEKIASSIRTNASTEMVLAEFQRQQREREEAEALRAAQAEAAAVEREKQEAEEEEELRRKGGGGATKRRRSILIEDLHPGKSVTTGKAAASFTATGVDLATGNTCRTATEEETREVRYKFARKLGKKGYVQLQTSLGNLNLEIHCDFVPRTAENFLGLCLRGFYDGLSFHRVIKGFMAQTGCPRGDGRGGETVWSLGGGREEGKEGGATMGFKDEFDSRLTHDKRGVLSMANSGKDTNRSQFFITFKSCRHLDNKHTVFGRVVGGMDVLGRLEGVEVGKEDRPKEEVKVLKAVALVNPLEESDAQFDAFVEGRRQEREAKQAFRRDNNALGFTRKGKGKGEEGNGV---LSAREAADAERTEGFYSQPGPQKSVG-EGVGRYL--GSGAGQGRLGGG--TVLPQRTAVVGSEAAYMQEVVGPAVHVKESSKAFQELAAQEERKGGSKKRRVAGAFGNFEGW 646
The following BLAST results are available for this feature:
BLAST of NO15G01670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22482.12.100e-25874.62peptidylprolyl isomerase-like 2 [Nannochloropsis g... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01670NO15G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G01670.1NO15G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G01670.1.cds1NO15G01670.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01670.1.cds2NO15G01670.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01670.1.cds3NO15G01670.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G01670.1 ID=NO15G01670.1|Name=NO15G01670.1|organism=Nannochloropsis oceanica|type=mRNA|length=2020bp
ATGGGGAAGAAGCAGCATTCCAAGGACCGCATGTTCCTGACCGCTACGGA
ATGGAAAGAACTGGGCGGAAAGCGGGAGACAGCAGGTCGATCCAGCTATC
GGCCCCTGGCTTTTGATTCATGTGCCCTAAGCTTGCAGCCGTTCGAGACG
CCCGTGTGCACTCCAGAAGGGGTCCTGTTCGACATCCTGAATTTATTCCC
TTACGTGCAGAAGCACAAGAAGAGCCCGATTACGGGGGAGTCGATGACGT
CCAAGGAGATTGTGCGGTTGAACATGGCGAAGAATAATGGGGGGAAGTGG
CATTGTCCTGTCACCTTTAAAGAGTTCACGGATCACACCCACGTCGTGGC
CGTCAAGCCCTCAGGGAATGTGTATGCATATGAGGCGGTGGAAGAGCTGA
ACATTAAAAGGAAGAACTGGACTGATTTGATGACGGGTGAGCCGTTCACA
CGCAAGGATATCATCACCTTGCAAGACCCCGGCAACGCCACGCACATGTC
TTTACGGGACATCAGTAATTTTAAGCACCTCGAAGAAATGCGTGCCGAGG
AAGCTGCGCGCGTCGCGGGCGAATCGGCTGACCAAAAAGTAACGAGTACA
ATTCGCACGAATGCTAGTACGGAGATGGTGATCAAGGAGTTCCAAAAACA
GAAACGGGCCCGCGAAGACGAAGAGGCCCTCAAAGCCGCAGAAGCCGAAG
CAGCCTCCGTGGACGCCCAAGGCAGAGAAGCAGAGGAAGAGGAAGAGCTG
CGGAAGAAGGGTGGAGGGGGAGCAACAAAGAAACGACGGCTCATCCTCAT
TCAGGACTTGCATCCAGGTAAAGCGATTACCACAGGTGCTGCCGCTGCTT
CCTTCACTGCCACGGGCGTGGACCTCGCCACGGAAAACACTTGCCGTCCT
GCCTCCGAAGAAGAAATCAGGCTGGTCCGTTACAAATACGCCAGAAAACT
GGGCAAAAAGGGTTATGTGCAGCTGCAGACCACACTGGGGAATGTCAATT
TGGAGATCCACTGTGACTTCGTCCCGAGGACCAGCGAGAATTTCTTGGGG
CTGTGCTTGAGGGGGTTTTACGATGGGGGATGGAAGGGGAGGGGCGACGG
TTTGGAGTTTGGGGGGGGAGGGGGGGGGGAAGCAGGGGCCCAAGGCGGGG
GGTTTAAGGATGAATTTGATAGCCGGCTGGTGCATGATAAGAGGGGGATC
TTGAGCATGGCAAACTCGGGGAAAGATACCAATCGCTCGCAATTTTTTAT
CACCTTTAAGGGGTGTCGGCACTTGGACAACAAGCACGCCGTCTTCGGGA
GGGTGGTGGGTGGCATGGACGTGCTGAAGAAAATCGAGGAGGTGGAGGTC
GGGAAGGAGGACAAGCCGAAGGAGGAGGTGAAGATCATCAAGGCAGTGGC
GTTTGTGAACCCTTTTGAGGAGAGTGATAAATTGTTTGATGCGTTCATTG
AAGAACAACGCAGGGAGCGACTGGCCAAGGAGGCGTTTTGGAAGAATAAT
AATGCCCTGGGATTTACCCGGAAAAAGGAGGGAGGGGAGGGAGGGAGGGA
TGTGGGGATGGAGAGGTCAGCGCAGGAGGTAGCAGAGGCAGAGAGGACGG
GTGGCTTCTATTCTCAGCCGGGACCACAGGCAAGCGCGGGGTGGGGAGGG
GTTGGGAAATATTTGAGTGGTGGAGGAGGAGGAGGGGGAGGAAAAGACGG
AGGGAGGAAAATGACAGTGCTGCCGCAGAAGGTGGCAGCAGTGGGGAGTG
AGGCGGAATACCGGCAGCTGTTGCAGGGGCCGAGCCCGCACCCGAAGGAA
TCGAGCAAGGCATTTCAGCAGCAGGCGTTAGAGGGAGGAGGGGGGAAAGG
GAAGAAGCAGCAAAGCAAGGGGTTCGGGGACTTTGAGGGGTGGTGAGAAG
GGGGGCAAAAGAAGGCATAAAGAACAATGTACAGCATGTGGAAGGCGTAA
TTGGACATCAAATGAGGGGACAAGGCAGAAGAATGAAAAATATTTAAAGG
GAAAAAAAGAAGTACCAATT
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protein sequence of NO15G01670.1

>NO15G01670.1-protein ID=NO15G01670.1-protein|Name=NO15G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=632bp
MGKKQHSKDRMFLTATEWKELGGKRETAGRSSYRPLAFDSCALSLQPFET
PVCTPEGVLFDILNLFPYVQKHKKSPITGESMTSKEIVRLNMAKNNGGKW
HCPVTFKEFTDHTHVVAVKPSGNVYAYEAVEELNIKRKNWTDLMTGEPFT
RKDIITLQDPGNATHMSLRDISNFKHLEEMRAEEAARVAGESADQKVTST
IRTNASTEMVIKEFQKQKRAREDEEALKAAEAEAASVDAQGREAEEEEEL
RKKGGGGATKKRRLILIQDLHPGKAITTGAAAASFTATGVDLATENTCRP
ASEEEIRLVRYKYARKLGKKGYVQLQTTLGNVNLEIHCDFVPRTSENFLG
LCLRGFYDGGWKGRGDGLEFGGGGGGEAGAQGGGFKDEFDSRLVHDKRGI
LSMANSGKDTNRSQFFITFKGCRHLDNKHAVFGRVVGGMDVLKKIEEVEV
GKEDKPKEEVKIIKAVAFVNPFEESDKLFDAFIEEQRRERLAKEAFWKNN
NALGFTRKKEGGEGGRDVGMERSAQEVAEAERTGGFYSQPGPQASAGWGG
VGKYLSGGGGGGGGKDGGRKMTVLPQKVAAVGSEAEYRQLLQGPSPHPKE
SSKAFQQQALEGGGGKGKKQQSKGFGDFEGW*
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mRNA from alignment at chr15:476414..478645+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G01670.1 ID=NO15G01670.1|Name=NO15G01670.1|organism=Nannochloropsis oceanica|type=mRNA|length=2232bp|location=Sequence derived from alignment at chr15:476414..478645+ (Nannochloropsis oceanica)
ATGGGGAAGAAGCAGCATTCCAAGGACCGCATGTTCCTGACCGCTACGGA
ATGGAAAGAACTGGGCGGAAAGCGGGAGACAGCAGGTCGATCCAGCTATC
GGCCCCTGGCTTTTGATTCATGTGCCCTAAGCTTGCAGCCGTTCGAGACG
CCCGTGTGCACTCCAGAAGGGGTCCTGTTCGACATCCTGAATTTATTCCC
TTACGTGCAGAAGCACAAGAAGAGCCCGATTACGGGGGAGTCGATGACGT
CCAAGGAGATTGTGCGGTTGAACATGGCGAAGAATAATGGGGGGAAGTGG
CATTGTCCTGTCACCTTTAAAGAGTTCACGGATCACACCCACGTCGTGGC
CGTCAAGCCCTCAGGGAATGTGTATGCATATGAGGCGGTGGAAGAGCTGA
ACATTAAAAGGAAGAACTGGACTGATTTGATGACGGGTGAGCCGTTCACA
CGCAAGGATGTACGTATGGGAGGAGGGATGGAGTCCGACGTGGGACGGAA
AAGGTCATTTCCAAGTTTAAAGGTAATCACGCAGTATACGTTTGCATTCA
GGACGTAGACATGTTTCCATTACCCCTTTCTTGTCCCCTTCCTCCACTTT
TTCCCTTTCCTCCAGATCATCACCTTGCAAGACCCCGGCAACGCCACGCA
CATGTCTTTACGGGACATCAGTAATTTTAAGCACCTCGAAGAAATGCGTG
CCGAGGAAGCTGCGCGCGTCGCGGGCGAATCGGCTGACCAAAAAGTAACG
AGTACAATTCGCACGAATGCTAGTACGGAGATGGTGATCAAGGAGTTCCA
AAAACAGAAACGGGCCCGCGAAGACGAAGAGGCCCTCAAAGCCGCAGAAG
CCGAAGCAGCCTCCGTGGACGCCCAAGGCAGAGAAGCAGAGGAAGAGGAA
GAGCTGCGGAAGAAGGGTGGAGGGGGAGCAACAAAGAAACGACGGCTCAT
CCTCATTCAGGACTTGCATCCAGGTAAAGCGATTACCACAGGTGCTGCCG
CTGCTTCCTTCACTGCCACGGGCGTGGACCTCGCCACGGAAAACACTTGC
CGTCCTGCCTCCGAAGAAGAAATCAGGCTGGTCCGTTACAAATACGCCAG
AAAACTGGGCAAAAAGGGTTATGTGCAGCTGCAGACCACACTGGGGAATG
TCAATTTGGAGATCCACTGTGACTTCGTCCCGAGGACCAGCGAGAATTTC
TTGGGGCTGTGCTTGAGGGGGTTTTACGATGGTCTGTCATTCCATCGTGT
CATTCAAGGCTTCATGGCGCAGGGAGGTTGTCCGCAGGGGGATGGAAGGG
GAGGGGCGACGGTTTGGAGTTTGGGGGGGGAGGGGGGGGGGAAGCAGGGG
CCCAAGGCGGGGGGTTTAAGGATGAATTTGATAGCCGGCTGGTGCATGAT
AAGAGGGGGATCTTGAGCATGGCAAACTCGGGGAAAGATACCAATCGCTC
GCAATTTTTTATCACCTTTAAGGGGTGTCGGCACTTGGACAACAAGCACG
CCGTCTTCGGGAGGGTGGTGGGTGGCATGGACGTGCTGAAGAAAATCGAG
GAGGTGGAGGTCGGGAAGGAGGACAAGCCGAAGGAGGAGGTGAAGATCAT
CAAGGCAGTGGCGTTTGTGAACCCTTTTGAGGAGAGTGATAAATTGTTTG
ATGCGTTCATTGAAGAACAACGCAGGGAGCGACTGGCCAAGGAGGCGTTT
TGGAAGAATAATAATGCCCTGGGATTTACCCGGAAAAAGGAGGGAGGGGA
GGGAGGGAGGGATGTGGGGATGGAGAGGTCAGCGCAGGAGGTAGCAGAGG
CAGAGAGGACGGGTGGCTTCTATTCTCAGCCGGGACCACAGGCAAGCGCG
GGGTGGGGAGGGGTTGGGAAATATTTGAGTGGTGGAGGAGGAGGAGGGGG
AGGAAAAGACGGAGGGAGGAAAATGACAGTGCTGCCGCAGAAGGTGGCAG
CAGTGGGGAGTGAGGCGGAATACCGGCAGCTGTTGCAGGGGCCGAGCCCG
CACCCGAAGGAATCGAGCAAGGCATTTCAGCAGCAGGCGTTAGAGGGAGG
AGGGGGGAAAGGGAAGAAGCAGCAAAGCAAGGGGTTCGGGGACTTTGAGG
GGTGGTGAGAAGGGGGGCAAAAGAAGGCATAAAGAACAATGTACAGCATG
TGGAAGGCGTAATTGGACATCAAATGAGGGGACAAGGCAGAAGAATGAAA
AATATTTAAAGGGAAAAAAAGAAGTACCAATT
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Coding sequence (CDS) from alignment at chr15:476414..478645+

>NO15G01670.1 ID=NO15G01670.1|Name=NO15G01670.1|organism=Nannochloropsis oceanica|type=CDS|length=1896bp|location=Sequence derived from alignment at chr15:476414..478645+ (Nannochloropsis oceanica)
ATGGGGAAGAAGCAGCATTCCAAGGACCGCATGTTCCTGACCGCTACGGA
ATGGAAAGAACTGGGCGGAAAGCGGGAGACAGCAGGTCGATCCAGCTATC
GGCCCCTGGCTTTTGATTCATGTGCCCTAAGCTTGCAGCCGTTCGAGACG
CCCGTGTGCACTCCAGAAGGGGTCCTGTTCGACATCCTGAATTTATTCCC
TTACGTGCAGAAGCACAAGAAGAGCCCGATTACGGGGGAGTCGATGACGT
CCAAGGAGATTGTGCGGTTGAACATGGCGAAGAATAATGGGGGGAAGTGG
CATTGTCCTGTCACCTTTAAAGAGTTCACGGATCACACCCACGTCGTGGC
CGTCAAGCCCTCAGGGAATGTGTATGCATATGAGGCGGTGGAAGAGCTGA
ACATTAAAAGGAAGAACTGGACTGATTTGATGACGGGTGAGCCGTTCACA
CGCAAGGATATCATCACCTTGCAAGACCCCGGCAACGCCACGCACATGTC
TTTACGGGACATCAGTAATTTTAAGCACCTCGAAGAAATGCGTGCCGAGG
AAGCTGCGCGCGTCGCGGGCGAATCGGCTGACCAAAAAGTAACGAGTACA
ATTCGCACGAATGCTAGTACGGAGATGGTGATCAAGGAGTTCCAAAAACA
GAAACGGGCCCGCGAAGACGAAGAGGCCCTCAAAGCCGCAGAAGCCGAAG
CAGCCTCCGTGGACGCCCAAGGCAGAGAAGCAGAGGAAGAGGAAGAGCTG
CGGAAGAAGGGTGGAGGGGGAGCAACAAAGAAACGACGGCTCATCCTCAT
TCAGGACTTGCATCCAGGTAAAGCGATTACCACAGGTGCTGCCGCTGCTT
CCTTCACTGCCACGGGCGTGGACCTCGCCACGGAAAACACTTGCCGTCCT
GCCTCCGAAGAAGAAATCAGGCTGGTCCGTTACAAATACGCCAGAAAACT
GGGCAAAAAGGGTTATGTGCAGCTGCAGACCACACTGGGGAATGTCAATT
TGGAGATCCACTGTGACTTCGTCCCGAGGACCAGCGAGAATTTCTTGGGG
CTGTGCTTGAGGGGGTTTTACGATGGGGGATGGAAGGGGAGGGGCGACGG
TTTGGAGTTTGGGGGGGGAGGGGGGGGGGAAGCAGGGGCCCAAGGCGGGG
GGTTTAAGGATGAATTTGATAGCCGGCTGGTGCATGATAAGAGGGGGATC
TTGAGCATGGCAAACTCGGGGAAAGATACCAATCGCTCGCAATTTTTTAT
CACCTTTAAGGGGTGTCGGCACTTGGACAACAAGCACGCCGTCTTCGGGA
GGGTGGTGGGTGGCATGGACGTGCTGAAGAAAATCGAGGAGGTGGAGGTC
GGGAAGGAGGACAAGCCGAAGGAGGAGGTGAAGATCATCAAGGCAGTGGC
GTTTGTGAACCCTTTTGAGGAGAGTGATAAATTGTTTGATGCGTTCATTG
AAGAACAACGCAGGGAGCGACTGGCCAAGGAGGCGTTTTGGAAGAATAAT
AATGCCCTGGGATTTACCCGGAAAAAGGAGGGAGGGGAGGGAGGGAGGGA
TGTGGGGATGGAGAGGTCAGCGCAGGAGGTAGCAGAGGCAGAGAGGACGG
GTGGCTTCTATTCTCAGCCGGGACCACAGGCAAGCGCGGGGTGGGGAGGG
GTTGGGAAATATTTGAGTGGTGGAGGAGGAGGAGGGGGAGGAAAAGACGG
AGGGAGGAAAATGACAGTGCTGCCGCAGAAGGTGGCAGCAGTGGGGAGTG
AGGCGGAATACCGGCAGCTGTTGCAGGGGCCGAGCCCGCACCCGAAGGAA
TCGAGCAAGGCATTTCAGCAGCAGGCGTTAGAGGGAGGAGGGGGGAAAGG
GAAGAAGCAGCAAAGCAAGGGGTTCGGGGACTTTGAGGGGTGGTGA
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Synonyms
Publications