NO15G01590.1, NO15G01590.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G01590.1
Unique NameNO15G01590.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length969
Alignment locationchr15:446555..447523 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:446555..447523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G01590.1 vs.
Match: EWM22487.1 (Nicotinamide N-methyltransferase, putative [Nannochloropsis gaditana])

HSP 1 Score: 269.6 bits (688), Expect = 1.200e-68
Identity = 152/297 (51.18%), Postives = 192/297 (64.65%), Query Frame = 0 
Query:   11 DKVKNEED-----DQDLAALGFLFDAAAAKAWIKHAF--PTSPPSSHQSNYRPALKSIEVEVQVIDDEDGPGALQTGQRTWPAAPFMADYLVRHWKRIAGRDGPIHVLELGAGCGLLGLALAQLPPVEHVIMTDHDPGTMVLIREGIARNHARIREGTRCEAALVEWGGEMDACLLP----KPGHGKEGGKDKTPVLLIVGSDLIYSVDVVASLFETVSRVLRKRREGFEATVTATATAIVAATGSDKFLLCGSFVLGAVIDRKVEEVVNRLKLQQEIVSLDDEMGNKEMWMHVYTL 297
            DKV N E+     +QDL ALGFLFDAAAAKAW++H F  PT+ P    +  +    SIEVEVQVI DEDGPGALQTGQRTWPAAPF+A YLV HW  I   D    VLELGAGCGL+GL LAQL  V+ +IMTDHDPG++ LI+EGI RN  R R+G RCE + +EWG E++  ++     +  + + G   +  +LL+VGSDL+YS+DVV SLF+TV+ + R R E              +  G  +FLLCGSF LG  I+++V EV  RLKL  E + L  E   + MW+  Y L
Sbjct:    5 DKVSNYENVDGDGEQDLTALGFLFDAAAAKAWVRHKFQAPTTGPFDCHAEDKDLRSSIEVEVQVIADEDGPGALQTGQRTWPAAPFLAQYLVEHWAGIT-FDRKCEVLELGAGCGLVGLTLAQLSGVDTIIMTDHDPGSLKLIQEGIFRNQHRWRDGVRCEISHMEWGKELNRQIVSLVNIERVNAEHGSCKEGIMLLLVGSDLVYSLDVVESLFKTVADLFRHRDE--------------SGRGRGQFLLCGSFALGDEIEKRVAEVTERLKLCTERLILGREDERRGMWITKYNL 286
The following BLAST results are available for this feature:
BLAST of NO15G01590.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22487.11.200e-6851.18Nicotinamide N-methyltransferase, putative [Nannoc... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01590NO15G01590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G01590.1NO15G01590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G01590.1.cds1NO15G01590.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G01590.1 ID=NO15G01590.1|Name=NO15G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=969bp
ATGGCACCAGCTCAATCCCTTCGGCCATCAGACAAGGTTAAAAACGAGGA
AGATGACCAAGACCTAGCAGCGCTGGGTTTTTTATTCGACGCCGCGGCCG
CAAAAGCATGGATCAAGCATGCCTTCCCGACCTCCCCTCCCTCCTCCCAC
CAAAGCAACTACAGGCCCGCATTAAAGTCAATAGAAGTAGAGGTACAGGT
GATCGATGACGAGGACGGACCGGGGGCACTCCAAACAGGCCAACGCACTT
GGCCTGCGGCGCCCTTCATGGCGGATTACCTTGTGCGACATTGGAAACGC
ATAGCAGGGAGAGACGGTCCCATCCACGTCCTGGAATTGGGGGCGGGATG
TGGGTTGCTGGGTCTGGCTCTCGCTCAACTGCCTCCTGTGGAGCACGTTA
TAATGACTGATCATGATCCAGGCACGATGGTATTGATTCGAGAGGGTATT
GCGCGGAACCATGCTAGGATACGGGAGGGAACGCGGTGCGAGGCTGCATT
AGTGGAATGGGGCGGTGAGATGGATGCATGCCTATTGCCAAAGCCAGGGC
ACGGCAAAGAGGGAGGAAAAGACAAGACACCAGTGCTCTTGATTGTGGGG
AGCGATTTGATCTATAGTGTGGATGTGGTGGCAAGCTTATTTGAAACAGT
ATCGCGGGTGCTTAGGAAAAGAAGGGAGGGATTTGAAGCAACAGTAACAG
CAACAGCAACAGCAATAGTGGCGGCAACGGGTTCGGACAAATTTTTACTG
TGCGGAAGCTTTGTATTGGGTGCAGTTATCGACCGGAAGGTGGAGGAAGT
GGTAAATAGATTGAAATTGCAGCAGGAAATAGTCTCGCTGGATGATGAGA
TGGGGAATAAGGAGATGTGGATGCATGTATATACCCTCCCTCCTCCCCCA
CCCTCATCCTCATCTCGCGAGCAAGGACAGACGAAATCACTTTTGAATCA
AAACTTCGCAAATTGGTGA
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protein sequence of NO15G01590.1

>NO15G01590.1-protein ID=NO15G01590.1-protein|Name=NO15G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bp
MAPAQSLRPSDKVKNEEDDQDLAALGFLFDAAAAKAWIKHAFPTSPPSSH
QSNYRPALKSIEVEVQVIDDEDGPGALQTGQRTWPAAPFMADYLVRHWKR
IAGRDGPIHVLELGAGCGLLGLALAQLPPVEHVIMTDHDPGTMVLIREGI
ARNHARIREGTRCEAALVEWGGEMDACLLPKPGHGKEGGKDKTPVLLIVG
SDLIYSVDVVASLFETVSRVLRKRREGFEATVTATATAIVAATGSDKFLL
CGSFVLGAVIDRKVEEVVNRLKLQQEIVSLDDEMGNKEMWMHVYTLPPPP
PSSSSREQGQTKSLLNQNFANW*
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mRNA from alignment at chr15:446555..447523-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G01590.1 ID=NO15G01590.1|Name=NO15G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=969bp|location=Sequence derived from alignment at chr15:446555..447523- (Nannochloropsis oceanica)
ATGGCACCAGCTCAATCCCTTCGGCCATCAGACAAGGTTAAAAACGAGGA
AGATGACCAAGACCTAGCAGCGCTGGGTTTTTTATTCGACGCCGCGGCCG
CAAAAGCATGGATCAAGCATGCCTTCCCGACCTCCCCTCCCTCCTCCCAC
CAAAGCAACTACAGGCCCGCATTAAAGTCAATAGAAGTAGAGGTACAGGT
GATCGATGACGAGGACGGACCGGGGGCACTCCAAACAGGCCAACGCACTT
GGCCTGCGGCGCCCTTCATGGCGGATTACCTTGTGCGACATTGGAAACGC
ATAGCAGGGAGAGACGGTCCCATCCACGTCCTGGAATTGGGGGCGGGATG
TGGGTTGCTGGGTCTGGCTCTCGCTCAACTGCCTCCTGTGGAGCACGTTA
TAATGACTGATCATGATCCAGGCACGATGGTATTGATTCGAGAGGGTATT
GCGCGGAACCATGCTAGGATACGGGAGGGAACGCGGTGCGAGGCTGCATT
AGTGGAATGGGGCGGTGAGATGGATGCATGCCTATTGCCAAAGCCAGGGC
ACGGCAAAGAGGGAGGAAAAGACAAGACACCAGTGCTCTTGATTGTGGGG
AGCGATTTGATCTATAGTGTGGATGTGGTGGCAAGCTTATTTGAAACAGT
ATCGCGGGTGCTTAGGAAAAGAAGGGAGGGATTTGAAGCAACAGTAACAG
CAACAGCAACAGCAATAGTGGCGGCAACGGGTTCGGACAAATTTTTACTG
TGCGGAAGCTTTGTATTGGGTGCAGTTATCGACCGGAAGGTGGAGGAAGT
GGTAAATAGATTGAAATTGCAGCAGGAAATAGTCTCGCTGGATGATGAGA
TGGGGAATAAGGAGATGTGGATGCATGTATATACCCTCCCTCCTCCCCCA
CCCTCATCCTCATCTCGCGAGCAAGGACAGACGAAATCACTTTTGAATCA
AAACTTCGCAAATTGGTGA
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Coding sequence (CDS) from alignment at chr15:446555..447523-

>NO15G01590.1 ID=NO15G01590.1|Name=NO15G01590.1|organism=Nannochloropsis oceanica|type=CDS|length=969bp|location=Sequence derived from alignment at chr15:446555..447523- (Nannochloropsis oceanica)
ATGGCACCAGCTCAATCCCTTCGGCCATCAGACAAGGTTAAAAACGAGGA
AGATGACCAAGACCTAGCAGCGCTGGGTTTTTTATTCGACGCCGCGGCCG
CAAAAGCATGGATCAAGCATGCCTTCCCGACCTCCCCTCCCTCCTCCCAC
CAAAGCAACTACAGGCCCGCATTAAAGTCAATAGAAGTAGAGGTACAGGT
GATCGATGACGAGGACGGACCGGGGGCACTCCAAACAGGCCAACGCACTT
GGCCTGCGGCGCCCTTCATGGCGGATTACCTTGTGCGACATTGGAAACGC
ATAGCAGGGAGAGACGGTCCCATCCACGTCCTGGAATTGGGGGCGGGATG
TGGGTTGCTGGGTCTGGCTCTCGCTCAACTGCCTCCTGTGGAGCACGTTA
TAATGACTGATCATGATCCAGGCACGATGGTATTGATTCGAGAGGGTATT
GCGCGGAACCATGCTAGGATACGGGAGGGAACGCGGTGCGAGGCTGCATT
AGTGGAATGGGGCGGTGAGATGGATGCATGCCTATTGCCAAAGCCAGGGC
ACGGCAAAGAGGGAGGAAAAGACAAGACACCAGTGCTCTTGATTGTGGGG
AGCGATTTGATCTATAGTGTGGATGTGGTGGCAAGCTTATTTGAAACAGT
ATCGCGGGTGCTTAGGAAAAGAAGGGAGGGATTTGAAGCAACAGTAACAG
CAACAGCAACAGCAATAGTGGCGGCAACGGGTTCGGACAAATTTTTACTG
TGCGGAAGCTTTGTATTGGGTGCAGTTATCGACCGGAAGGTGGAGGAAGT
GGTAAATAGATTGAAATTGCAGCAGGAAATAGTCTCGCTGGATGATGAGA
TGGGGAATAAGGAGATGTGGATGCATGTATATACCCTCCCTCCTCCCCCA
CCCTCATCCTCATCTCGCGAGCAAGGACAGACGAAATCACTTTTGAATCA
AAACTTCGCAAATTGGTGA
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Synonyms
Publications